Pregenerated sensors for LINC00671 (Homo sapiens)
Ensembl gene IDs: ENSG00000213373Ensembl transcript IDs: ENST00000301683.7, ENST00000417193.5, ENST00000436546.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTCCCCACCCTGACACTTGACCTGTGGCTGACAGTGGGCCACCTCTaGTCCACTCAGGCTCCGTGGCCGGAGAGTCTGCAGCTTCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: VPTLTLDLWLTVGHL*STQAPWPESLQLLW Trigger: CCAGAGAAGCTGCAGACTCTCCGGCCACGGAGCCTGAGTGGAGCAGAGGTGGCCCACTGTCAGCCACAGGTCAAGTGTCAGGGTGGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301683.7 ENST00000417193.5 ENST00000436546.1 |
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| CDS TCA 90 bp | TCAGCAGGAAGCCCAGGCTGCCCACCCAGTCTGAGGGGACGGCACTaGCTGGGCAGGATCTGGCAAGAGGGGAGTTTAGGGTGCAGATTT | + |
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Preference number: 5 (lower is better) Translates to: SAGSPGCPPSLRGRH*LGRIWQEGSLGCRF Trigger: AAATCTGCACCCTAAACTCCCCTCTTGCCAGATCCTGCCCAGTCAGTGCCGTCCCCTCAGACTGGGTGGGCAGCCTGGGCTTCCTGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS CCA 90 bp | CTCTGCTCCACTCAGGCTCCGTGGCCGGAGAGTCTGCAGCTTCTCTaGCATTCCTCCTCCCCGTCTGGGTCCTATAATTCCAGCACTTTG | + |
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Preference number: 5 (lower is better) Translates to: LCSTQAPWPESLQLL*HSSSPSGSYNSSTL Trigger: CAAAGTGCTGGAATTATAGGACCCAGACGGGGAGGAGGAATGCCAGAGAAGCTGCAGACTCTCCGGCCACGGAGCCTGAGTGGAGCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417193.5 ENST00000436546.1 |
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| CDS CCA 90 bp | CTTGCCCTGAAAATGAATGCTGTAGAGAGCCAGGGCTGCCACTCTTaGCTGCTCCACAGGTTGCTTCTCCAGATGCGGAGATGGGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: LALKMNAVESQGCHS*LLHRLLLQMRRWGE Trigger: TTCTCCCCATCTCCGCATCTGGAGAAGCAACCTGTGGAGCAGCCAAGAGTGGCAGCCCTGGCTCTCTACAGCATTCATTTTCAGGGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS CCA 90 bp | GCTTGTGACCAGAAGAGGGATCATCAACTGGGATCCCAGATCACATaGAATCCTGTGGTTCCCTTGAGAACTGCCTGGACCCCCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: ACDQKRDHQLGSQIT*NPVVPLRTAWTPRS Trigger: TGACCTGGGGGTCCAGGCAGTTCTCAAGGGAACCACAGGATTCCATGTGATCTGGGATCCCAGTTGATGATCCCTCTTCTGGTCACAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS TCA 90 bp | AGGAGCTCTCAGGAGAAGCCCCCAAGGTGGCCTGTTGGAAGGCTCTaGTGGGAACATTTCCTTCCACCTTCAAGAAAGAAGCAATGGGAC | + |
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Preference number: 5 (lower is better) Translates to: RSSQEKPPRWPVGRL*WEHFLPPSRKKQWD Trigger: GTCCCATTGCTTCTTTCTTGAAGGTGGAAGGAAATGTTCCCATCAGAGCCTTCCAACAGGCCACCTTGGGGGCTTCTCCTGAGAGCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS TCA 90 bp | ATCATCAACTGGGATCCCAGATCACATGGAATCCTGTGGTTCCCTTaGGAACTGCCTGGACCCCCAGGTCAACCATATGGGCTGGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: IINWDPRSHGILWFP*ELPGPPGQPYGLER Trigger: CCTTTCCAGCCCATATGGTTGACCTGGGGGTCCAGGCAGTTCTCAAGGGAACCACAGGATTCCATGTGATCTGGGATCCCAGTTGATGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS GCA 90 bp | ACTGGGATCCCAGATCACATGGAATCCTGTGGTTCCCTTGAGAACTaGCTGGACCCCCAGGTCAACCATATGGGCTGGAAAGGAAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: TGIPDHMESCGSLEN*LDPQVNHMGWKGSK Trigger: CTTACTTCCTTTCCAGCCCATATGGTTGACCTGGGGGTCCAGGCAGTTCTCAAGGGAACCACAGGATTCCATGTGATCTGGGATCCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS CCA 90 bp | ACCCTGAAGAATGCAGCCCAGAGAGATCCAAAGGGTCAGAAGCTCTaGGGCAAATCTGGTAAACTTCCTGGGGGTGCCACAGACTCATCT | + |
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Preference number: 5 (lower is better) Translates to: TLKNAAQRDPKGQKL*GKSGKLPGGATDSS Trigger: AGATGAGTCTGTGGCACCCCCAGGAAGTTTACCAGATTTGCCCCAGAGCTTCTGACCCTTTGGATCTCTCTGGGCTGCATTCTTCAGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301683.7 ENST00000417193.5 |
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| CDS CCA 90 bp | TGTGTGCACAAGGAGCTCTCAGGAGAAGCCCCCAAGGTGGCCTGTTaGAAGGCTCTGATGGGAACATTTCCTTCCACCTTCAAGAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: CVHKELSGEAPKVAC*KALMGTFPSTFKKE Trigger: TTCTTTCTTGAAGGTGGAAGGAAATGTTCCCATCAGAGCCTTCCAACAGGCCACCTTGGGGGCTTCTCCTGAGAGCTCCTTGTGCACACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS CCA 90 bp | GGATCCCAGATCACATGGAATCCTGTGGTTCCCTTGAGAACTGCCTaGACCCCCAGGTCAACCATATGGGCTGGAAAGGAAGTAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: GSQITWNPVVPLRTA*TPRSTIWAGKEVSS Trigger: AGAACTTACTTCCTTTCCAGCCCATATGGTTGACCTGGGGGTCCAGGCAGTTCTCAAGGGAACCACAGGATTCCATGTGATCTGGGATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS TCA 90 bp | GCAAGAGGGGAGTTTAGGGTGCAGATTTGGGTCCAATTCAGCTTGTaGCCAGAAGAGGGATCATCAACTGGGATCCCAGATCACATGGAA | + |
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Preference number: 5 (lower is better) Translates to: ARGEFRVQIWVQFSL*PEEGSSTGIPDHME Trigger: TTCCATGTGATCTGGGATCCCAGTTGATGATCCCTCTTCTGGTCACAAGCTGAATTGGACCCAAATCTGCACCCTAAACTCCCCTCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS CCA 90 bp | CCTGTGGTTCCCTTGAGAACTGCCTGGACCCCCAGGTCAACCATATaGGCTGGAAAGGAAGTAAGTTCTAGCAAAAGGACCTTCATACAA | + |
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Preference number: 5 (lower is better) Translates to: PVVPLRTAWTPRSTI*AGKEVSSSKRTFIQ Trigger: TTGTATGAAGGTCCTTTTGCTAGAACTTACTTCCTTTCCAGCCCATATGGTTGACCTGGGGGTCCAGGCAGTTCTCAAGGGAACCACAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS CCA 90 bp | ACACTTCCTCCATTGATCATCATCAGCAGACCAGACTGTACTTCCTaGCATCTTTCCTTCATGTTCTTCTCAAGATCCAAAGCCTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: TLPPLIIISRPDCTS*HLSFMFFSRSKASG Trigger: TCCAGAGGCTTTGGATCTTGAGAAGAACATGAAGGAAAGATGCCAGGAAGTACAGTCTGGTCTGCTGATGATGATCAATGGAGGAAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436546.1 |
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| CDS TCA 90 bp | AAAGCCGTGGGAACCACACTTCAATTCATGACTTTCAGCATATCTTaGAAGCACTTAGATAGGGAAGGTTTGGAAAGGCAGAACTGCTAC | + |
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Preference number: 5 (lower is better) Translates to: KAVGTTLQFMTFSIS*KHLDREGLERQNCY Trigger: GTAGCAGTTCTGCCTTTCCAAACCTTCCCTATCTAAGTGCTTTCAAGATATGCTGAAAGTCATGAATTGAAGTGTGGTTCCCACGGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS CCA 72 bp | CTCCACCTTGCCCTGTGGTCTGGCCCCGCCTTCTGGTaGAGCCTGCCCCCGCCTTCTGGTGGAGCCTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LHLALWSGPAFW*SLPPPSGGACP Trigger: GGGGCAGGCTCCACCAGAAGGCGGGGGCAGGCTCCACCAGAAGGCGGGGCCAGACCACAGGGCAAGGTGGAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000301683.7 ENST00000417193.5 ENST00000436546.1 |
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| CDS TCA 72 bp | AGCCCAGGCTGCCCACCCAGTCTGAGGGGACGGCACTaGCTGGGCAGGATCTGGCAAGAGGGGAGTTTAGGG | + |
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Preference number: 6 (lower is better) Translates to: SPGCPPSLRGRH*LGRIWQEGSLG Trigger: CCCTAAACTCCCCTCTTGCCAGATCCTGCCCAGTCAGTGCCGTCCCCTCAGACTGGGTGGGCAGCCTGGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS GCA 72 bp | CTGACACTTGACCTGTGGCTGACAGTGGGCCACCTCTaGTCCACTCAGGCTCCGTGGCCGGAGAGTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LTLDLWLTVGHL*STQAPWPESLQ Trigger: CTGCAGACTCTCCGGCCACGGAGCCTGAGTGGAGCAGAGGTGGCCCACTGTCAGCCACAGGTCAAGTGTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301683.7 ENST00000417193.5 ENST00000436546.1 |
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| CDS CCA 72 bp | CTGACAGTGGGCCACCTCTGCTCCACTCAGGCTCCGTaGCCGGAGAGTCTGCAGCTTCTCTGGCATTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LTVGHLCSTQAP*PESLQLLWHSS Trigger: GGAGGAATGCCAGAGAAGCTGCAGACTCTCCGGCCACGGAGCCTGAGTGGAGCAGAGGTGGCCCACTGTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301683.7 ENST00000417193.5 ENST00000436546.1 |
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| CDS CCA 72 bp | ACTCAGGCTCCGTGGCCGGAGAGTCTGCAGCTTCTCTaGCATTCCTCCTCCCCGTCTGGGTCCTATAATTCC | + |
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Preference number: 6 (lower is better) Translates to: TQAPWPESLQLL*HSSSPSGSYNS Trigger: GGAATTATAGGACCCAGACGGGGAGGAGGAATGCCAGAGAAGCTGCAGACTCTCCGGCCACGGAGCCTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417193.5 ENST00000436546.1 |
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| CDS TCA 72 bp | TGGGATCCCAGATCACATGGAATCCTGTGGTTCCCTTaGGAACTGCCTGGACCCCCAGGTCAACCATATGGG | + |
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Preference number: 6 (lower is better) Translates to: WDPRSHGILWFP*ELPGPPGQPYG Trigger: CCCATATGGTTGACCTGGGGGTCCAGGCAGTTCTCAAGGGAACCACAGGATTCCATGTGATCTGGGATCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS GCA 72 bp | CTTGCCCTGAAAATGAATGCTGTAGAGAGCCAGGGCTaGCACTCTTGGCTGCTCCACAGGTTGCTTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LALKMNAVESQG*HSWLLHRLLLQ Trigger: CTGGAGAAGCAACCTGTGGAGCAGCCAAGAGTGGCAGCCCTGGCTCTCTACAGCATTCATTTTCAGGGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS CAA 72 bp | CAAGGAGCTCTCAGGAGAAGCCCCCAAGGTGGCCTGTaGGAAGGCTCTGATGGGAACATTTCCTTCCACCTT | + |
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Preference number: 6 (lower is better) Translates to: QGALRRSPQGGL*EGSDGNISFHL Trigger: AAGGTGGAAGGAAATGTTCCCATCAGAGCCTTCCAACAGGCCACCTTGGGGGCTTCTCCTGAGAGCTCCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS TCA 72 bp | GACTTCAGGAGATTGAGACCATCCTGGCTAACACGGTaGAACCCCGTCTCTAGCAGTATGAGGCGTCCACAC | + |
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Preference number: 6 (lower is better) Translates to: DFRRLRPSWLTR*NPVSSSMRRPH Trigger: GTGTGGACGCCTCATACTGCTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCAATCTCCTGAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS CCA 72 bp | AATGCAGCCCAGAGAGATCCAAAGGGTCAGAAGCTCTaGGGCAAATCTGGTAAACTTCCTGGGGGTGCCACA | + |
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Preference number: 6 (lower is better) Translates to: NAAQRDPKGQKL*GKSGKLPGGAT Trigger: TGTGGCACCCCCAGGAAGTTTACCAGATTTGCCCCAGAGCTTCTGACCCTTTGGATCTCTCTGGGCTGCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301683.7 ENST00000417193.5 |
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| CDS CCA 72 bp | AAAATGAATGCTGTAGAGAGCCAGGGCTGCCACTCTTaGCTGCTCCACAGGTTGCTTCTCCAGATGCGGAGA | + |
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Preference number: 6 (lower is better) Translates to: KMNAVESQGCHS*LLHRLLLQMRR Trigger: TCTCCGCATCTGGAGAAGCAACCTGTGGAGCAGCCAAGAGTGGCAGCCCTGGCTCTCTACAGCATTCATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS CAA 90 bp | GTGTGTGCACAAGGAGCTCTCAGGAGAAGCCCCCAAGGTGGCCTGTaGGAAGGCTCTGATGGGAACATTTCCTTCCACCTTCAAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: VCAQGALRRSPQGGL*EGSDGNISFHLQER Trigger: TCTTTCTTGAAGGTGGAAGGAAATGTTCCCATCAGAGCCTTCCAACAGGCCACCTTGGGGGCTTCTCCTGAGAGCTCCTTGTGCACACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS TCA 72 bp | CAGGAGAAGCCCCCAAGGTGGCCTGTTGGAAGGCTCTaGTGGGAACATTTCCTTCCACCTTCAAGAAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: QEKPPRWPVGRL*WEHFLPPSRKK Trigger: CTTCTTTCTTGAAGGTGGAAGGAAATGTTCCCATCAGAGCCTTCCAACAGGCCACCTTGGGGGCTTCTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS TCA 72 bp | CAAAGCCTCTGGATTTCTAGTTGTGGGGAAAATGCCTaGGGAGTGGCTTGCTTGGGTACCTGCTCTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: QSLWISSCGENA*GVACLGTCSPR Trigger: CCTTGGAGAGCAGGTACCCAAGCAAGCCACTCCTCAGGCATTTTCCCCACAACTAGAAATCCAGAGGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436546.1 |
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| CDS CCA 72 bp | CCCTTGAGAACTGCCTGGACCCCCAGGTCAACCATATaGGCTGGAAAGGAAGTAAGTTCTAGCAAAAGGACC | + |
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Preference number: 6 (lower is better) Translates to: PLRTAWTPRSTI*AGKEVSSSKRT Trigger: GGTCCTTTTGCTAGAACTTACTTCCTTTCCAGCCCATATGGTTGACCTGGGGGTCCAGGCAGTTCTCAAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS CCA 72 bp | ATCACATGGAATCCTGTGGTTCCCTTGAGAACTGCCTaGACCCCCAGGTCAACCATATGGGCTGGAAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: ITWNPVVPLRTA*TPRSTIWAGKE Trigger: TTCCTTTCCAGCCCATATGGTTGACCTGGGGGTCCAGGCAGTTCTCAAGGGAACCACAGGATTCCATGTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS CAA 90 bp | AAGGCAGAACTGCTACTGCCGCTGCTGCTGCCTCTTCTTTCCATTTaGTGTCTCAGCTCAAAGATAGAGCTTCTCTTTACCCTCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: KAELLLPLLLPLLSI*CLSSKIELLFTLSA Trigger: GGCTGAGAGGGTAAAGAGAAGCTCTATCTTTGAGCTGAGACACAAAATGGAAAGAAGAGGCAGCAGCAGCGGCAGTAGCAGTTCTGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS TCA 72 bp | ACAGCAGTTGATCTGGCCAGTTTCCCATGTCCACCATaGAACACTTCCTCCATTGATCACTGCTCTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: TAVDLASFPCPP*NTSSIDHCSPR Trigger: CCTTGGAGAGCAGTGATCAATGGAGGAAGTGTTTCATGGTGGACATGGGAAACTGGCCAGATCAACTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417193.5 |
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| CDS GCA 72 bp | GAAGGTTTGGAAAGGCAGAACTGCTACTGCCGCTGCTaGTGCCTCTTCTTTCCATTTTGTGTCTCAGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: EGLERQNCYCRC*CLFFPFCVSAQ Trigger: TTGAGCTGAGACACAAAATGGAAAGAAGAGGCAGCAGCAGCGGCAGTAGCAGTTCTGCCTTTCCAAACCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS CCA 72 bp | CCAATTCAGCTTGTGACCAGAAGAGGGATCATCAACTaGGATCCCAGATCACATGGAATCCTGTGGTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: PIQLVTRRGIIN*DPRSHGILWFP Trigger: AGGGAACCACAGGATTCCATGTGATCTGGGATCCCAGTTGATGATCCCTCTTCTGGTCACAAGCTGAATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS TCA 72 bp | ACAGCAGTTGATCTGGCCAGTTTCCCATGTCCACCATaGAACACTTCCTCCATTGATCACTGTAATCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TAVDLASFPCPP*NTSSIDHCNPS Trigger: GCTGGGATTACAGTGATCAATGGAGGAAGTGTTTCATGGTGGACATGGGAAACTGGCCAGATCAACTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS TCA 72 bp | GAGTTTAGGGTGCAGATTTGGGTCCAATTCAGCTTGTaGCCAGAAGAGGGATCATCAACTGGGATCCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: EFRVQIWVQFSL*PEEGSSTGIPD Trigger: ATCTGGGATCCCAGTTGATGATCCCTCTTCTGGTCACAAGCTGAATTGGACCCAAATCTGCACCCTAAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS TCA 72 bp | ACAGCAGTTGATCTGGCCAGTTTCCCATGTCCACCATaGAACACTTCCTCCATTGATCATCATCAGCAGACC | + |
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Preference number: 6 (lower is better) Translates to: TAVDLASFPCPP*NTSSIDHHQQT Trigger: GGTCTGCTGATGATGATCAATGGAGGAAGTGTTTCATGGTGGACATGGGAAACTGGCCAGATCAACTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436546.1 |
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| CDS GCA 72 bp | TTAGATAGGGAAGGTTTGGAAAGGCAGAACTGCTACTaGCGCTGCTGCTGCCTCTTCTTTCCATTTTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: LDREGLERQNCY*RCCCLFFPFCV Trigger: GACACAAAATGGAAAGAAGAGGCAGCAGCAGCGGCAGTAGCAGTTCTGCCTTTCCAAACCTTCCCTATCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS GCA 72 bp | AAGCACTTAGATAGGGAAGGTTTGGAAAGGCAGAACTaGTACTGCCGCTGCTGCTGCCTCTTCTTTCCATTT | + |
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Preference number: 6 (lower is better) Translates to: KHLDREGLERQN*YCRCCCLFFPF Trigger: AAATGGAAAGAAGAGGCAGCAGCAGCGGCAGTAGCAGTTCTGCCTTTCCAAACCTTCCCTATCTAAGTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS CAA 72 bp | CTGCTACTGCCGCTGCTGCTGCCTCTTCTTTCCATTTaGTGTCTCAGCTCAAAGATAGAGCTTCTCTTTACC | + |
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Preference number: 6 (lower is better) Translates to: LLLPLLLPLLSI*CLSSKIELLFT Trigger: GGTAAAGAGAAGCTCTATCTTTGAGCTGAGACACAAAATGGAAAGAAGAGGCAGCAGCAGCGGCAGTAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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| CDS TCA 72 bp | GGAACCACACTTCAATTCATGACTTTCAGCATATCTTaGAAGCACTTAGATAGGGAAGGTTTGGAAAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: GTTLQFMTFSIS*KHLDREGLERQ Trigger: CTGCCTTTCCAAACCTTCCCTATCTAAGTGCTTTCAAGATATGCTGAAAGTCATGAATTGAAGTGTGGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301683.7 |
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