Pregenerated sensors for LINC00670 (Homo sapiens)
Ensembl gene IDs: ENSG00000179136Ensembl transcript IDs: ENST00000313495.6, ENST00000577679.1, ENST00000577863.2, ENST00000660226.1, ENST00000671006.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTCCATTTTCCTCTCCCTGCTATGGCAAATGACAACCCTTCATGGTaGAAGCTTGTCAGTCTGCATCCCCGCGTGAGGACGAGGTGGACC | + |
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Preference number: 5 (lower is better) Translates to: LHFPLPAMANDNPSW*KLVSLHPRVRTRWT Trigger: GGTCCACCTCGTCCTCACGCGGGGATGCAGACTGACAAGCTTCCACCATGAAGGGTTGTCATTTGCCATAGCAGGGAGAGGAAAATGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000313495.6 ENST00000577679.1 ENST00000577863.2 ENST00000660226.1 ENST00000671006.1 |
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| CDS TCA 90 bp | TGTCAGTCTGCATCCCCGCGTGAGGACGAGGTGGACCAGAATCCATaGAAGATGTGCAGCATTTGCAGTACTCTGCCGTGGAGTATATTC | + |
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Preference number: 5 (lower is better) Translates to: CQSASPREDEVDQNP*KMCSICSTLPWSIF Trigger: GAATATACTCCACGGCAGAGTACTGCAAATGCTGCACATCTTTCATGGATTCTGGTCCACCTCGTCCTCACGCGGGGATGCAGACTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000313495.6 ENST00000577863.2 ENST00000660226.1 ENST00000671006.1 |
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| CDS TCA 90 bp | AAAAACAACAGGCACTGGCGAGGTTGTGGAGAAAAAGAAATGCTTTaGCCCTGCCGGTGGGAGTGTAAATTAGTTCAGCCACTGCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: KNNRHWRGCGEKEML*PCRWECKLVQPLRK Trigger: CTTCCGCAGTGGCTGAACTAATTTACACTCCCACCGGCAGGGTCAAAGCATTTCTTTTTCTCCACAACCTCGCCAGTGCCTGTTGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313495.6 |
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| CDS TCA 90 bp | TCCTTGATCCCTTTTCCCGAAGATCTAGCTTGGGACCAGACGTTGTaGAAATGTAGCCAGCCTCCACGAAGGAGTTATTTCAACTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: SLIPFPEDLAWDQTL*KCSQPPRRSYFNCV Trigger: GACACAGTTGAAATAACTCCTTCGTGGAGGCTGGCTACATTTTCACAACGTCTGGTCCCAAGCTAGATCTTCGGGAAAAGGGATCAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000313495.6 ENST00000577863.2 ENST00000660226.1 |
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| CDS TCA 90 bp | CGGTGGGAGTGTAAATTAGTTCAGCCACTGCGGAAGACAGTGTGGTaGTCCTTCAAATACCTACAGACAGAACTACCATTCAACCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: RWECKLVQPLRKTVW*SFKYLQTELPFNPA Trigger: TGCTGGGTTGAATGGTAGTTCTGTCTGTAGGTATTTGAAGGATCACCACACTGTCTTCCGCAGTGGCTGAACTAATTTACACTCCCACCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313495.6 |
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| CDS TCA 90 bp | TGTCAGTCTGCATCCCCGCGTGAGGACGAGGTGGACCAGAATCCATaGAAGATGTGCAGCATTTTATTTGGAGGAATAGTCATTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: CQSASPREDEVDQNP*KMCSILFGGIVISL Trigger: CAAGGAAATGACTATTCCTCCAAATAAAATGCTGCACATCTTTCATGGATTCTGGTCCACCTCGTCCTCACGCGGGGATGCAGACTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577679.1 |
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| CDS CCA 90 bp | CCGCACGTTCTCACTTATAAGTGGGAGCTAAATGATGAGAACACATaGACACATAGAGAGGTACAACACATACTGGGGCCTTTTGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: PHVLTYKWELNDENT*THREVQHILGPFGR Trigger: CCTTCCAAAAGGCCCCAGTATGTGTTGTACCTCTCTATGTGTCCATGTGTTCTCATCATTTAGCTCCCACTTATAAGTGAGAACGTGCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313495.6 |
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| CDS TCA 90 bp | CACACACTCTCAAAGGGTGACCAACTACTGCAGTTTGTTCAAGCCTaGGAATGTTCCCATGACATACGACTTTCAGTGCCAAAATCGAGA | + |
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Preference number: 5 (lower is better) Translates to: HTLSKGDQLLQFVQA*ECSHDIRLSVPKSR Trigger: TCTCGATTTTGGCACTGAAAGTCGTATGTCATGGGAACATTCTCAGGCTTGAACAAACTGCAGTAGTTGGTCACCCTTTGAGAGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660226.1 |
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| CDS TCA 90 bp | TTGAGGAACACAGATAAAGTTAGTGAGATTAGAGTTGCGACTGAATaGACCCGTGGATTCCTGAGACTGCAGCTGACAGATGAAGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: LRNTDKVSEIRVATE*TRGFLRLQLTDEVS Trigger: TGAGACTTCATCTGTCAGCTGCAGTCTCAGGAATCCACGGGTTCATTCAGTCGCAACTCTAATCTCACTAACTTTATCTGTGTTCCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000313495.6 ENST00000577679.1 |
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| CDS TCA 90 bp | AAAATTTCAAAACACTCTGTCAGTGCTGCAACCATGTGGATAGGCTaGATGTGGCCCTTAGAGGTCCAATTTGTAACTCCTGCTCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: KISKHSVSAATMWIG*MWPLEVQFVTPAPE Trigger: TTCTGGAGCAGGAGTTACAAATTGGACCTCTAAGGGCCACATTCAGCCTATCCACATGGTTGCAGCACTGACAGAGTGTTTTGAAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313495.6 |
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| CDS CCA 90 bp | AACGTAGGGACAGAAAGCCAGATACCGCACGTTCTCACTTATAAGTaGGAGCTAAATGATGAGAACACATGGACACATAGAGAGGTACAA | + |
|
Preference number: 5 (lower is better) Translates to: NVGTESQIPHVLTYK*ELNDENTWTHREVQ Trigger: TTGTACCTCTCTATGTGTCCATGTGTTCTCATCATTTAGCTCCCACTTATAAGTGAGAACGTGCGGTATCTGGCTTTCTGTCCCTACGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313495.6 |
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| CDS TCA 90 bp | ACAGCATTTATCCAGTTGTCCTTTCCATCACAGGGAAATGATCCCTaGCTCTTCCATCTCCCTCCATTCTCACATCCAATTAATCGACAA | + |
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Preference number: 5 (lower is better) Translates to: TAFIQLSFPSQGNDP*LFHLPPFSHPINRQ Trigger: TTGTCGATTAATTGGATGTGAGAATGGAGGGAGATGGAAGAGTCAGGGATCATTTCCCTGTGATGGAAAGGACAACTGGATAAATGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660226.1 |
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| CDS CCA 90 bp | ATCAGCAGTCTAAGGATAAAGAGTGTTGATTTAACTGTAGGAGGATaGAGCTCGGGAAACTCGGCAAAACCAATGAAAAGGGATCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: ISSLRIKSVDLTVGG*SSGNSAKPMKRDLL Trigger: AAGGAGATCCCTTTTCATTGGTTTTGCCGAGTTTCCCGAGCTCCATCCTCCTACAGTTAAATCAACACTCTTTATCCTTAGACTGCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000313495.6 ENST00000577679.1 ENST00000577863.2 |
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| CDS CCA 90 bp | ATTAGCTTTTTCTGGACCCTAATGTTACCTAGATTAGATTTAACGTaGCATGGTCAAGTACACAAGGAACCATTCAGGCCATCAGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: ISFFWTLMLPRLDLT*HGQVHKEPFRPSES Trigger: GCTTTCTGATGGCCTGAATGGTTCCTTGTGTACTTGACCATGCCACGTTAAATCTAATCTAGGTAACATTAGGGTCCAGAAAAAGCTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671006.1 |
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| CDS TCA 90 bp | TTAGTTTCTTGCTATGTACGAATCTTTGTCTGGACACTGAGAAAATaGGATGTCAGGTTTCCCTATCAGTGGGAAGCAAATAGTCTAAGG | + |
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Preference number: 5 (lower is better) Translates to: LVSCYVRIFVWTLRK*DVRFPYQWEANSLR Trigger: CCTTAGACTATTTGCTTCCCACTGATAGGGAAACCTGACATCTCATTTTCTCAGTGTCCAGACAAAGATTCGTACATAGCAAGAAACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000313495.6 ENST00000577679.1 |
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| CDS TCA 90 bp | CTCTCTTCTGATCTCATTTCCAGCTATGTACTAGACATCTCTGTTTaGATGTTCCCTCCCACTCCAAAATATCTTCTACATTCTCTAACT | + |
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Preference number: 5 (lower is better) Translates to: LSSDLISSYVLDISV*MFPPTPKYLLHSLT Trigger: AGTTAGAGAATGTAGAAGATATTTTGGAGTGGGAGGGAACATTCAAACAGAGATGTCTAGTACATAGCTGGAAATGAGATCAGAAGAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660226.1 |
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| CDS GCA 90 bp | AGCATTTGCAGTACTCTGCCGTGGAGTATATTCACTCTTGATATTTaGCACCACTTTGATCCAACTTTCATTTTGTTTAGCAGCTACATT | + |
|
Preference number: 5 (lower is better) Translates to: SICSTLPWSIFTLDI*HHFDPTFILFSSYI Trigger: AATGTAGCTGCTAAACAAAATGAAAGTTGGATCAAAGTGGTGGCAAATATCAAGAGTGAATATACTCCACGGCAGAGTACTGCAAATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000313495.6 ENST00000577863.2 ENST00000660226.1 ENST00000671006.1 |
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| CDS TCA 72 bp | GCATCCCCGCGTGAGGACGAGGTGGACCAGAATCCATaGAAGATGTGCAGCATTTGCAGTACTCTGCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: ASPREDEVDQNP*KMCSICSTLPW Trigger: CCACGGCAGAGTACTGCAAATGCTGCACATCTTTCATGGATTCTGGTCCACCTCGTCCTCACGCGGGGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000313495.6 ENST00000577863.2 ENST00000660226.1 ENST00000671006.1 |
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| CDS CCA 72 bp | CCTCTCCCTGCTATGGCAAATGACAACCCTTCATGGTaGAAGCTTGTCAGTCTGCATCCCCGCGTGAGGACG | + |
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Preference number: 6 (lower is better) Translates to: PLPAMANDNPSW*KLVSLHPRVRT Trigger: CGTCCTCACGCGGGGATGCAGACTGACAAGCTTCCACCATGAAGGGTTGTCATTTGCCATAGCAGGGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000313495.6 ENST00000577679.1 ENST00000577863.2 ENST00000660226.1 ENST00000671006.1 |
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| CDS CCA 72 bp | AAGCTTGTCAGTCTGCATCCCCGCGTGAGGACGAGGTaGACCAGAATCCATGAAAGATGTGCAGCATTTGCA | + |
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Preference number: 6 (lower is better) Translates to: KLVSLHPRVRTR*TRIHERCAAFA Trigger: TGCAAATGCTGCACATCTTTCATGGATTCTGGTCCACCTCGTCCTCACGCGGGGATGCAGACTGACAAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000313495.6 ENST00000577863.2 ENST00000660226.1 ENST00000671006.1 |
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| CDS TCA 72 bp | AGGCACTGGCGAGGTTGTGGAGAAAAAGAAATGCTTTaGCCCTGCCGGTGGGAGTGTAAATTAGTTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: RHWRGCGEKEML*PCRWECKLVQP Trigger: TGGCTGAACTAATTTACACTCCCACCGGCAGGGTCAAAGCATTTCTTTTTCTCCACAACCTCGCCAGTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313495.6 |
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| CDS TCA 72 bp | GCATCCCCGCGTGAGGACGAGGTGGACCAGAATCCATaGAAGATGTGCAGCATTTTATTTGGAGGAATAGTC | + |
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Preference number: 6 (lower is better) Translates to: ASPREDEVDQNP*KMCSILFGGIV Trigger: GACTATTCCTCCAAATAAAATGCTGCACATCTTTCATGGATTCTGGTCCACCTCGTCCTCACGCGGGGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577679.1 |
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| CDS CCA 72 bp | AAGCTTGTCAGTCTGCATCCCCGCGTGAGGACGAGGTaGACCAGAATCCATGAAAGATGTGCAGCATTTTAT | + |
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Preference number: 6 (lower is better) Translates to: KLVSLHPRVRTR*TRIHERCAAFY Trigger: ATAAAATGCTGCACATCTTTCATGGATTCTGGTCCACCTCGTCCTCACGCGGGGATGCAGACTGACAAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577679.1 |
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| CDS TCA 72 bp | CCTTTTCCCGAAGATCTAGCTTGGGACCAGACGTTGTaGAAATGTAGCCAGCCTCCACGAAGGAGTTATTTC | + |
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Preference number: 6 (lower is better) Translates to: PFPEDLAWDQTL*KCSQPPRRSYF Trigger: GAAATAACTCCTTCGTGGAGGCTGGCTACATTTTCACAACGTCTGGTCCCAAGCTAGATCTTCGGGAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000313495.6 ENST00000577863.2 ENST00000660226.1 |
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| CDS CCA 72 bp | AGAACACATGGACACATAGAGAGGTACAACACATACTaGGGCCTTTTGGAAGGTGGAGGGTGGGAGAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: RTHGHIERYNTY*GLLEGGGWEKK Trigger: TTTCTTCTCCCACCCTCCACCTTCCAAAAGGCCCCAGTATGTGTTGTACCTCTCTATGTGTCCATGTGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313495.6 |
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| CDS CAA 72 bp | TGGGACACTCTTCTGTATGACGAGCTGGTGACTGATTaGCTCCATTTTCCTCTCCCTGCTATGGCAAATGAC | + |
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Preference number: 6 (lower is better) Translates to: WDTLLYDELVTD*LHFPLPAMAND Trigger: GTCATTTGCCATAGCAGGGAGAGGAAAATGGAGCAAATCAGTCACCAGCTCGTCATACAGAAGAGTGTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000313495.6 ENST00000577679.1 ENST00000577863.2 ENST00000660226.1 ENST00000671006.1 |
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| CDS CAA 90 bp | AGAACACATGGACACATAGAGAGGTACAACACATACTGGGGCCTTTaGGAAGGTGGAGGGTGGGAGAAGAAAGACGTAACTAATGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: RTHGHIERYNTYWGL*EGGGWEKKDVTNGY Trigger: GTACCCATTAGTTACGTCTTTCTTCTCCCACCCTCCACCTTCCAAAAGGCCCCAGTATGTGTTGTACCTCTCTATGTGTCCATGTGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313495.6 |
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| CDS TCA 72 bp | AAACACTCTGTCAGTGCTGCAACCATGTGGATAGGCTaGATGTGGCCCTTAGAGGTCCAATTTGTAACTCCT | + |
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Preference number: 6 (lower is better) Translates to: KHSVSAATMWIG*MWPLEVQFVTP Trigger: AGGAGTTACAAATTGGACCTCTAAGGGCCACATTCAGCCTATCCACATGGTTGCAGCACTGACAGAGTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313495.6 |
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| CDS CAA 90 bp | CATCTTGTTAAACGGTGTGTAGTCCACAGGATGTTTACGACTCTCTaGGTTCTACTCCGTCCAGACAAATGTCCGAATTTCACCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: HLVKRCVVHRMFTTL*VLLRPDKCPNFTSQ Trigger: CTGAGAGGTGAAATTCGGACATTTGTCTGGACGGAGTAGAACCAAGAGAGTCGTAAACATCCTGTGGACTACACACCGTTTAACAAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000313495.6 ENST00000577679.1 ENST00000577863.2 ENST00000660226.1 ENST00000671006.1 |
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| CDS TCA 72 bp | ATCCAGTTGTCCTTTCCATCACAGGGAAATGATCCCTaGCTCTTCCATCTCCCTCCATTCTCACATCCAATT | + |
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Preference number: 6 (lower is better) Translates to: IQLSFPSQGNDP*LFHLPPFSHPI Trigger: AATTGGATGTGAGAATGGAGGGAGATGGAAGAGTCAGGGATCATTTCCCTGTGATGGAAAGGACAACTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660226.1 |
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| CDS TCA 72 bp | TCAAAGGGTGACCAACTACTGCAGTTTGTTCAAGCCTaGGAATGTTCCCATGACATACGACTTTCAGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: SKGDQLLQFVQA*ECSHDIRLSVP Trigger: TGGCACTGAAAGTCGTATGTCATGGGAACATTCTCAGGCTTGAACAAACTGCAGTAGTTGGTCACCCTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660226.1 |
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| CDS CAA 72 bp | AAACGGTGTGTAGTCCACAGGATGTTTACGACTCTCTaGGTTCTACTCCGTCCAGACAAATGTCCGAATTTC | + |
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Preference number: 6 (lower is better) Translates to: KRCVVHRMFTTL*VLLRPDKCPNF Trigger: GAAATTCGGACATTTGTCTGGACGGAGTAGAACCAAGAGAGTCGTAAACATCCTGTGGACTACACACCGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000313495.6 ENST00000577679.1 ENST00000577863.2 ENST00000660226.1 ENST00000671006.1 |
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| CDS TCA 72 bp | ACAGATAAAGTTAGTGAGATTAGAGTTGCGACTGAATaGACCCGTGGATTCCTGAGACTGCAGCTGACAGAT | + |
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Preference number: 6 (lower is better) Translates to: TDKVSEIRVATE*TRGFLRLQLTD Trigger: ATCTGTCAGCTGCAGTCTCAGGAATCCACGGGTTCATTCAGTCGCAACTCTAATCTCACTAACTTTATCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000313495.6 ENST00000577679.1 |
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| CDS CCA 72 bp | CTCACTTATAAGTGGGAGCTAAATGATGAGAACACATaGACACATAGAGAGGTACAACACATACTGGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LTYKWELNDENT*THREVQHILGP Trigger: AGGCCCCAGTATGTGTTGTACCTCTCTATGTGTCCATGTGTTCTCATCATTTAGCTCCCACTTATAAGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313495.6 |
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| CDS GCA 72 bp | CTGAATGTGGCCCTTAGAGGTCCAATTTGTAACTCCTaGTCCAGAAGAACATGCTACTCCATTCCTTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: LNVALRGPICNS*SRRTCYSIPLK Trigger: TTTTAAAGGAATGGAGTAGCATGTTCTTCTGGAGCAGGAGTTACAAATTGGACCTCTAAGGGCCACATTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313495.6 |
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| CDS CCA 72 bp | ACAGAAAGCCAGATACCGCACGTTCTCACTTATAAGTaGGAGCTAAATGATGAGAACACATGGACACATAGA | + |
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Preference number: 6 (lower is better) Translates to: TESQIPHVLTYK*ELNDENTWTHR Trigger: TCTATGTGTCCATGTGTTCTCATCATTTAGCTCCCACTTATAAGTGAGAACGTGCGGTATCTGGCTTTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313495.6 |
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| CDS CAA 72 bp | GTCCAGACAAATGTCCGAATTTCACCTCTCAGCTCCTaGGAGATAGTCATGTACTTTGGCCATAACATATCA | + |
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Preference number: 6 (lower is better) Translates to: VQTNVRISPLSS*EIVMYFGHNIS Trigger: TGATATGTTATGGCCAAAGTACATGACTATCTCCAAGGAGCTGAGAGGTGAAATTCGGACATTTGTCTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000313495.6 ENST00000577679.1 ENST00000577863.2 ENST00000660226.1 ENST00000671006.1 |
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| CDS TCA 72 bp | TGCTATGTACGAATCTTTGTCTGGACACTGAGAAAATaGGATGTCAGGTTTCCCTATCAGTGGGAAGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: CYVRIFVWTLRK*DVRFPYQWEAN Trigger: ATTTGCTTCCCACTGATAGGGAAACCTGACATCTCATTTTCTCAGTGTCCAGACAAAGATTCGTACATAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000313495.6 ENST00000577679.1 |
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| CDS GCA 72 bp | TTTTTATTCACACACTCTCAAAGGGTGACCAACTACTaGAGTTTGTTCAAGCCTGAGAATGTTCCCATGACA | + |
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Preference number: 6 (lower is better) Translates to: FLFTHSQRVTNY*SLFKPENVPMT Trigger: TGTCATGGGAACATTCTCAGGCTTGAACAAACTGCAGTAGTTGGTCACCCTTTGAGAGTGTGTGAATAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660226.1 |
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| CDS CAA 72 bp | TGGACTTTCCTGGTGCAGGCATTCCTTTACAAGCATTaGCTAAGCACTTATCTTGCACAAAACATTGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: WTFLVQAFLYKH*LSTYLAQNIVE Trigger: TTCCACAATGTTTTGTGCAAGATAAGTGCTTAGCAAATGCTTGTAAAGGAATGCCTGCACCAGGAAAGTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313495.6 |
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| CDS CAA 90 bp | GATGTCAGGTTTCCCTATCAGTGGGAAGCAAATAGTCTAAGGCATTaGAGGAACACAGATAAAGTTAGTGAGATTAGAGTTGCGACTGAA | + |
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Preference number: 6 (lower is better) Translates to: DVRFPYQWEANSLRH*RNTDKVSEIRVATE Trigger: TTCAGTCGCAACTCTAATCTCACTAACTTTATCTGTGTTCCTCAAATGCCTTAGACTATTTGCTTCCCACTGATAGGGAAACCTGACATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000313495.6 ENST00000577679.1 |
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| CDS CAA 90 bp | GTTTTCCTGGTTCCCTCCATGTTCTGTAACACCTATCTTAGTTTCTaGCTATGTACGAATCTTTGTCTGGACACTGAGAAAATGAGATGT | + |
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Preference number: 6 (lower is better) Translates to: VFLVPSMFCNTYLSF*LCTNLCLDTEKMRC Trigger: ACATCTCATTTTCTCAGTGTCCAGACAAAGATTCGTACATAGCAAGAAACTAAGATAGGTGTTACAGAACATGGAGGGAACCAGGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000313495.6 ENST00000577679.1 |
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| CDS CAA 72 bp | GTTCCCTCCATGTTCTGTAACACCTATCTTAGTTTCTaGCTATGTACGAATCTTTGTCTGGACACTGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: VPSMFCNTYLSF*LCTNLCLDTEK Trigger: TTTCTCAGTGTCCAGACAAAGATTCGTACATAGCAAGAAACTAAGATAGGTGTTACAGAACATGGAGGGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000313495.6 ENST00000577679.1 |
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| CDS CAA 72 bp | TTCTTATCTAAAATTTGTAGAGTTGACTTCCGGTGTTaGTACAGGAAGCGGTTGGTGAGATTATCAGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: FLSKICRVDFRC*YRKRLVRLSAV Trigger: GACTGCTGATAATCTCACCAACCGCTTCCTGTACAAACACCGGAAGTCAACTCTACAAATTTTAGATAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577863.2 |
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| CDS CAA 90 bp | GAAAGGCAGAAGCATGAAACAGCTCCGTTAAAGAGAAGACAGTATTaGTACTCAGGATTTGAACAAGGCCCATTTATTGAATATAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: ERQKHETAPLKRRQY*YSGFEQGPFIEYSC Trigger: GCAACTATATTCAATAAATGGGCCTTGTTCAAATCCTGAGTACAAATACTGTCTTCTCTTTAACGGAGCTGTTTCATGCTTCTGCCTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671006.1 |
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| CDS TCA 72 bp | GATCTCATTTCCAGCTATGTACTAGACATCTCTGTTTaGATGTTCCCTCCCACTCCAAAATATCTTCTACAT | + |
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Preference number: 6 (lower is better) Translates to: DLISSYVLDISV*MFPPTPKYLLH Trigger: ATGTAGAAGATATTTTGGAGTGGGAGGGAACATTCAAACAGAGATGTCTAGTACATAGCTGGAAATGAGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660226.1 |
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| CDS GCA 72 bp | TTCCCTCCATGTTCTGTAACACCTATCTTAGTTTCTTaGTATGTACGAATCTTTGTCTGGACACTGAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: FPPCSVTPILVS*YVRIFVWTLRK Trigger: TTTTCTCAGTGTCCAGACAAAGATTCGTACATAGCAAGAAACTAAGATAGGTGTTACAGAACATGGAGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000313495.6 ENST00000577679.1 |
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| CDS CAA 90 bp | TTACCCTCCCATACAAATCTTTGTTCCATTGATTTCAAGTACCTTTaGGATGTCAAACGCTCTAAAATTTATTTATTCGGCCCAGACCTC | + |
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Preference number: 6 (lower is better) Translates to: LPSHTNLCSIDFKYL*DVKRSKIYLFGPDL Trigger: GAGGTCTGGGCCGAATAAATAAATTTTAGAGCGTTTGACATCCAAAAGGTACTTGAAATCAATGGAACAAAGATTTGTATGGGAGGGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660226.1 |
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| CDS CAA 90 bp | AGAGAAGACAGTATTTGTACTCAGGATTTGAACAAGGCCCATTTATaGAATATAGTTGCAGCACTGGAATCCAGAATACTGTTGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: REDSICTQDLNKAHL*NIVAALESRILLHL Trigger: AAGATGCAACAGTATTCTGGATTCCAGTGCTGCAACTATATTCAATAAATGGGCCTTGTTCAAATCCTGAGTACAAATACTGTCTTCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671006.1 |
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| CDS GCA 72 bp | GTGCCAAAATCGAGAAAGTCTCAAAGAAGAATGATTTaGTTACCCTCCCATACAAATCTTTGTTCCATTGAT | + |
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Preference number: 6 (lower is better) Translates to: VPKSRKSQRRMI*LPSHTNLCSID Trigger: ATCAATGGAACAAAGATTTGTATGGGAGGGTAAGCAAATCATTCTTCTTTGAGACTTTCTCGATTTTGGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660226.1 |
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| CDS CAA 72 bp | TTTCCCTATCAGTGGGAAGCAAATAGTCTAAGGCATTaGAGGAACACAGATAAAGTTAGTGAGATTAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: FPYQWEANSLRH*RNTDKVSEIRV Trigger: AACTCTAATCTCACTAACTTTATCTGTGTTCCTCAAATGCCTTAGACTATTTGCTTCCCACTGATAGGGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000313495.6 ENST00000577679.1 |
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| CDS CAA 72 bp | AGTATTTGTACTCAGGATTTGAACAAGGCCCATTTATaGAATATAGTTGCAGCACTGGAATCCAGAATACTG | + |
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Preference number: 6 (lower is better) Translates to: SICTQDLNKAHL*NIVAALESRIL Trigger: CAGTATTCTGGATTCCAGTGCTGCAACTATATTCAATAAATGGGCCTTGTTCAAATCCTGAGTACAAATACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671006.1 |
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| CDS CAA 72 bp | AAGCATGAAACAGCTCCGTTAAAGAGAAGACAGTATTaGTACTCAGGATTTGAACAAGGCCCATTTATTGAA | + |
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Preference number: 6 (lower is better) Translates to: KHETAPLKRRQY*YSGFEQGPFIE Trigger: TTCAATAAATGGGCCTTGTTCAAATCCTGAGTACAAATACTGTCTTCTCTTTAACGGAGCTGTTTCATGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671006.1 |
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| CDS TCA 72 bp | ACATTGAATCAACCTAAATGCCCATCGATGGTAGACTaGATAAAGCAAAATTGGTACATATACACCATGGAA | + |
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Preference number: 6 (lower is better) Translates to: TLNQPKCPSMVD*IKQNWYIYTME Trigger: TTCCATGGTGTATATGTACCAATTTTGCTTTATTCAGTCTACCATCGATGGGCATTTAGGTTGATTCAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313495.6 |
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| CDS GCA 72 bp | GTATGTATGCTATCACCGCATTCAATTATTTTAACCTaGTGTGAACTTGCTTGTGATAAATCATGGGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: VCMLSPHSIILT*CELACDKSWEN Trigger: GTTTTCCCATGATTTATCACAAGCAAGTTCACAGCAGGTTAAAATAATTGAATGCGGTGATAGCATACATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313495.6 |
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| CDS TCA 72 bp | CTATCATGGAAATTATGCTTTGGGACAAATATGTTATaGATGACGGCTCATAAAATCATGCCAGTATGTATG | + |
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Preference number: 6 (lower is better) Translates to: LSWKLCFGTNML*MTAHKIMPVCM Trigger: CATACATACTGGCATGATTTTATGAGCCGTCATTCATAACATATTTGTCCCAAAGCATAATTTCCATGATAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313495.6 |
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