Pregenerated sensors for LINC00668 (Homo sapiens)
Ensembl gene IDs: ENSG00000265933Ensembl transcript IDs: ENST00000578278.5, ENST00000578497.5, ENST00000579012.1, ENST00000580197.5, ENST00000581571.5, ENST00000581725.5, ENST00000583316.5, ENST00000583840.1
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CATCGTCCGGCCTCACCCCCTACCCTGGGTCCTGCACGTGGGCACTaGGGGCTTCTGGGCCACCTCCGCCCTTGCAGCGCAGAGGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: HRPASPPTLGPARGH*GLLGHLRPCSAEGP Trigger: GGGGCCCTCTGCGCTGCAAGGGCGGAGGTGGCCCAGAAGCCCGCAGTGCCCACGTGCAGGACCCAGGGTAGGGGGTGAGGCCGGACGATG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS GCA 90 bp | GCCGACGCTCGGCCCCTGCAGCTCCATCCGCCCGCGGGCTGCCTTTaGTTTGCCTCCCTGTGTGGCTGGGAACCAGCGGGGCGGGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: ADARPLQLHPPAGCL*FASLCGWEPAGRVP Trigger: TGGCACCCGCCCCGCTGGTTCCCAGCCACACAGGGAGGCAAAGCAAAGGCAGCCCGCGGGCGGATGGAGCTGCAGGGGCCGAGCGTCGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS GCA 90 bp | GGGCTTGCCGACGCTCGGCCCCTGCAGCTCCATCCGCCCGCGGGCTaGCTTTGCTTTGCCTCCCTGTGTGGCTGGGAACCAGCGGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: GLADARPLQLHPPAG*LCFASLCGWEPAGR Trigger: CCGCCCCGCTGGTTCCCAGCCACACAGGGAGGCAAAGCAAAGGCAGCCCGCGGGCGGATGGAGCTGCAGGGGCCGAGCGTCGGCAAGCCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS GCA 90 bp | CGCTCGGCCCCTGCAGCTCCATCCGCCCGCGGGCTGCCTTTGCTTTaGCTCCCTGTGTGGCTGGGAACCAGCGGGGCGGGTGCCATCGTC | + |
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Preference number: 5 (lower is better) Translates to: RSAPAAPSARGLPLL*LPVWLGTSGAGAIV Trigger: GACGATGGCACCCGCCCCGCTGGTTCCCAGCCACACAGGGAGGCAAAGCAAAGGCAGCCCGCGGGCGGATGGAGCTGCAGGGGCCGAGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS GCA 90 bp | GCAACCCTGCGCCAGGCCGTCCTGGGCTTGCCGACGCTCGGCCCCTaGAGCTCCATCCGCCCGCGGGCTGCCTTTGCTTTGCCTCCCTGT | + |
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Preference number: 5 (lower is better) Translates to: ATLRQAVLGLPTLGP*SSIRPRAAFALPPC Trigger: ACAGGGAGGCAAAGCAAAGGCAGCCCGCGGGCGGATGGAGCTGCAGGGGCCGAGCGTCGGCAAGCCCAGGACGGCCTGGCGCAGGGTTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CCA 90 bp | GCAGCTCCATCCGCCCGCGGGCTGCCTTTGCTTTGCCTCCCTGTGTaGCTGGGAACCAGCGGGGCGGGTGCCATCGTCCGGCCTCACCCC | + |
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Preference number: 5 (lower is better) Translates to: AAPSARGLPLLCLPV*LGTSGAGAIVRPHP Trigger: GGGGTGAGGCCGGACGATGGCACCCGCCCCGCTGGTTCCCAGCCACACAGGGAGGCAAAGCAAAGGCAGCCCGCGGGCGGATGGAGCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CCA 90 bp | CTCCATCCGCCCGCGGGCTGCCTTTGCTTTGCCTCCCTGTGTGGCTaGGAACCAGCGGGGCGGGTGCCATCGTCCGGCCTCACCCCCTAC | + |
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Preference number: 5 (lower is better) Translates to: LHPPAGCLCFASLCG*EPAGRVPSSGLTPY Trigger: GTAGGGGGTGAGGCCGGACGATGGCACCCGCCCCGCTGGTTCCCAGCCACACAGGGAGGCAAAGCAAAGGCAGCCCGCGGGCGGATGGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS GCA 90 bp | GCCTTTGCTTTGCCTCCCTGTGTGGCTGGGAACCAGCGGGGCGGGTaGCATCGTCCGGCCTCACCCCCTACCCTGGGTCCTGCACGTGGG | + |
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Preference number: 5 (lower is better) Translates to: AFALPPCVAGNQRGG*HRPASPPTLGPARG Trigger: CCCACGTGCAGGACCCAGGGTAGGGGGTGAGGCCGGACGATGGCACCCGCCCCGCTGGTTCCCAGCCACACAGGGAGGCAAAGCAAAGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS GCA 90 bp | GGACTAGTGGGTGGCTGTGCGGCCGGAGGCTTTAAAGCTTTGTCTTaGATCCGCGGGCCACGCTGGAGGTCGGGCGCCCGCAACCCTGCG | + |
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Preference number: 5 (lower is better) Translates to: GLVGGCAAGGFKALS*IRGPRWRSGARNPA Trigger: CGCAGGGTTGCGGGCGCCCGACCTCCAGCGTGGCCCGCGGATGCAAGACAAAGCTTTAAAGCCTCCGGCCGCACAGCCACCCACTAGTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS GCA 90 bp | GCAGGCCTGTGGCCCCAGCTCCTCAGGGGACTGAGGCAGGAGGATTaGTTGAGCAGTCCTCAGGCAGTGGAGGCACCAGTGACCTGTGGT | + |
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Preference number: 5 (lower is better) Translates to: AGLWPQLLRGLRQED*LSSPQAVEAPVTCG Trigger: ACCACAGGTCACTGGTGCCTCCACTGCCTGAGGACTGCTCAAGCAATCCTCCTGCCTCAGTCCCCTGAGGAGCTGGGGCCACAGGCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000578278.5 ENST00000580197.5 ENST00000581571.5 |
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| CDS GCA 90 bp | TGCCCACCTCCCGCTGGCCCCGTGGGTATGCAGCTCGGTGGACCATaGAGACCTATGTGGATTGTGCCTTCCGAGCTGGGAATAGACACG | + |
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Preference number: 5 (lower is better) Translates to: CPPPAGPVGMQLGGP*RPMWIVPSELGIDT Trigger: CGTGTCTATTCCCAGCTCGGAAGGCACAATCCACATAGGTCTGCATGGTCCACCGAGCTGCATACCCACGGGGCCAGCGGGAGGTGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580197.5 |
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| CDS GCA 90 bp | CGGCCTCCGCCCGATCCACCCTGCGTGAATACAATTATTTCCCTCTaGCTTCCACTCGGAGAGAGCGGCCAGGATGCCAACTGGCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: RPPPDPPCVNTIISL*LPLGESGQDANWLH Trigger: GTGAAGCCAGTTGGCATCCTGGCCGCTCTCTCCGAGTGGAAGGCAGAGGGAAATAATTGTATTCACGCAGGGTGGATCGGGCGGAGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583840.1 |
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| CDS GCA 90 bp | CCAATCTGTGGGCCCTGTGTAAATCAGACGCCGCCTCCTCAAGCCTaGCTATCAAGTCTGCTGTGGTCCACCTCAGGCCGGCTTTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: PICGPCVNQTPPPQA*LSSLLWSTSGRLFP Trigger: GGGAAAAAGCCGGCCTGAGGTGGACCACAGCAGACTTGATAGGCAGGCTTGAGGAGGCGGCGTCTGATTTACACAGGGCCCACAGATTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000579012.1 |
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| CDS GCA 90 bp | CCGTGGGTATGCAGCTCGGTGGACCATGCAGACCTATGTGGATTGTaGCTTCCGAGCTCAGACAGTGATGCTGCTTCAGCTGGACGGCTC | + |
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Preference number: 5 (lower is better) Translates to: PWVCSSVDHADLCGL*LPSSDSDAASAGRL Trigger: GAGCCGTCCAGCTGAAGCAGCATCACTGTCTGAGCTCGGAAGGCACAATCCACATAGGTCTGCATGGTCCACCGAGCTGCATACCCACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000578497.5 ENST00000581571.5 ENST00000581725.5 ENST00000583316.5 |
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| CDS CCA 90 bp | GCTGGCCCCGTGGGTATGCAGCTCGGTGGACCATGCAGACCTATGTaGATTGTGCCTTCCGAGCTGGGAATAGACACGTTCAAAACGGTG | + |
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Preference number: 5 (lower is better) Translates to: AGPVGMQLGGPCRPM*IVPSELGIDTFKTV Trigger: CACCGTTTTGAACGTGTCTATTCCCAGCTCGGAAGGCACAATCCACATAGGTCTGCATGGTCCACCGAGCTGCATACCCACGGGGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000580197.5 |
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| CDS TCA 90 bp | GCTCTTGAAATTCGGTGGCAGTGGCCTGAATCCCCATGCCCACTGTaGCAGAGCAGGAGCACCATCCTCTCGGACAAACACCGCCACTTT | + |
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Preference number: 5 (lower is better) Translates to: ALEIRWQWPESPCPL*QSRSTILSDKHRHF Trigger: AAAGTGGCGGTGTTTGTCCGAGAGGATGGTGCTCCTGCTCTGTCACAGTGGGCATGGGGATTCAGGCCACTGCCACCGAATTTCAAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000578278.5 ENST00000580197.5 ENST00000581571.5 |
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| CDS GCA 90 bp | GTGGTGGTGGCGTGTGGTTGTGGCGGTGTGTGGTTGTGTCGTCCTTaGTGTTGCCTTACTTGTCTTGGAACTCTTCAGCAGGCAGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: VVVACGCGGVWLCRP*CCLTCLGTLQQAEE Trigger: CTCCTCTGCCTGCTGAAGAGTTCCAAGACAAGTAAGGCAACAGCAAGGACGACACAACCACACACCGCCACAACCACACGCCACCACCAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CCA 90 bp | CTATCAAGTCTGCTGTGGTCCACCTCAGGCCGGCTTTTTCCCTTTTaGATGCCTCTCTCTCAGACAGTGATGCTGCTTCAGCTGGACGGC | + |
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Preference number: 5 (lower is better) Translates to: LSSLLWSTSGRLFPF*MPLSQTVMLLQLDG Trigger: GCCGTCCAGCTGAAGCAGCATCACTGTCTGAGAGAGAGGCATCCAAAAGGGAAAAAGCCGGCCTGAGGTGGACCACAGCAGACTTGATAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000579012.1 |
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| CDS CCA 90 bp | TGTGGTGTGGTTGTGGTAGTGTGTGGTGGTGGTGGCGTGTGGTTGTaGCGGTGTGTGGTTGTGTCGTCCTTGCTGTTGCCTTACTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: CGVVVVVCGGGGVWL*RCVVVSSLLLPYLS Trigger: AGACAAGTAAGGCAACAGCAAGGACGACACAACCACACACCGCCACAACCACACGCCACCACCACCACACACTACCACAACCACACCACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS TCA 90 bp | CCTCAGGCCGGCTTTTTCCCTTTTGGATGCCTCTCTCTCAGACAGTaGTGCTGCTTCAGCTGGACGGCTCTTGAATGCCTCCATAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: PQAGFFPFGCLSLRQ*CCFSWTALECLHRG Trigger: TCCTCTATGGAGGCATTCAAGAGCCGTCCAGCTGAAGCAGCATCACTGTCTGAGAGAGAGGCATCCAAAAGGGAAAAAGCCGGCCTGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000579012.1 |
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| CDS GCA 90 bp | AGCAGCCTGAGCAGCTCAGAGGGAGGTTGTGGTTGTGTGTTGTGGTaGTGGTGTGTGGTTGTGGTTGTGGTGTTGTGTGGTTGTGGTTAT | + |
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Preference number: 5 (lower is better) Translates to: SSLSSSEGGCGCVLW*WCVVVVVVLCGCGY Trigger: ATAACCACAACCACACAACACCACAACCACAACCACACACCAGCACCACAACACACAACCACAACCTCCCTCTGAGCTGCTCAGGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CCA 90 bp | TGGCGGTGTGTGGTTGTGTCGTCCTTGCTGTTGCCTTACTTGTCTTaGAACTCTTCAGCAGGCAGAGGAGAGAGAGGTTCTTCAGACCGT | + |
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Preference number: 5 (lower is better) Translates to: WRCVVVSSLLLPYLS*NSSAGRGERGSSDR Trigger: ACGGTCTGAAGAACCTCTCTCTCCTCTGCCTGCTGAAGAGTTCCAAGACAAGTAAGGCAACAGCAAGGACGACACAACCACACACCGCCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS GCA 90 bp | GCCTCATGCATTTCAAGAAAATCACTTCTCTTCTGTAGTCCCAGCTaGTTAGGAGGCGGAGACGGGAAGATCCCTCGAGCTCAGTACAGC | + |
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Preference number: 5 (lower is better) Translates to: ASCISRKSLLFCSPS*LGGGDGKIPRAQYS Trigger: GCTGTACTGAGCTCGAGGGATCTTCCCGTCTCCGCCTCCTAAGCAGCTGGGACTACAGAAGAGAAGTGATTTTCTTGAAATGCATGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578278.5 |
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| CDS CCA 90 bp | CAAACTGGTTGGTTAAAGCAGCCTGAGCAGCTCAGAGGGAGGTTGTaGTTGTGTGTTGTGGTGCTGGTGTGTGGTTGTGGTTGTGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: QTGWLKQPEQLRGRL*LCVVVLVCGCGCGV Trigger: AACACCACAACCACAACCACACACCAGCACCACAACACACAACCACAACCTCCCTCTGAGCTGCTCAGGCTGCTTTAACCAACCAGTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS TCA 90 bp | CAAGTGCGGGGTGACCCAGTTCAAGGCACTGTCATGAACACAGGATaGCCAGGTTCTTCTGGCTTGCACTTGCAAACCTTTAGACGATCA | + |
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Preference number: 5 (lower is better) Translates to: QVRGDPVQGTVMNTG*PGSSGLHLQTFRRS Trigger: TGATCGTCTAAAGGTTTGCAAGTGCAAGCCAGAAGAACCTGGTCATCCTGTGTTCATGACAGTGCCTTGAACTGGGTCACCCCGCACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CCA 90 bp | GTCGCTAGACGGCAGCAGAGGATTTTGATTGGATTCCAAACTGGTTaGTTAAAGCAGCCTGAGCAGCTCAGAGGGAGGTTGTGGTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: VARRQQRILIGFQTG*LKQPEQLRGRLWLC Trigger: ACACAACCACAACCTCCCTCTGAGCTGCTCAGGCTGCTTTAACCAACCAGTTTGGAATCCAATCAAAATCCTCTGCTGCCGTCTAGCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS GCA 90 bp | TTCAGGTGCACTAAGATAGGGAAGCTAAAAGCAGACCTGGGGGTATaGCTGCAGCTGCAGGAAGATGTATGGAAACAGACACACAACTCC | + |
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Preference number: 5 (lower is better) Translates to: FRCTKIGKLKADLGV*LQLQEDVWKQTHNS Trigger: GGAGTTGTGTGTCTGTTTCCATACATCTTCCTGCAGCTGCAGGCATACCCCCAGGTCTGCTTTTAGCTTCCCTATCTTAGTGCACCTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000580197.5 |
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| CDS GCA 72 bp | CGCCAGGCCGTCCTGGGCTTGCCGACGCTCGGCCCCTaGAGCTCCATCCGCCCGCGGGCTGCCTTTGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: RQAVLGLPTLGP*SSIRPRAAFAL Trigger: CAAAGCAAAGGCAGCCCGCGGGCGGATGGAGCTGCAGGGGCCGAGCGTCGGCAAGCCCAGGACGGCCTGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CCA 72 bp | CTACCCTGGGTCCTGCACGTGGGCACTGCGGGCTTCTaGGCCACCTCCGCCCTTGCAGCGCAGAGGGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: LPWVLHVGTAGF*ATSALAAQRAP Trigger: CGGGGCCCTCTGCGCTGCAAGGGCGGAGGTGGCCCAGAAGCCCGCAGTGCCCACGTGCAGGACCCAGGGTAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CAA 90 bp | TGCCGACGCTCGGCCCCTGCAGCTCCATCCGCCCGCGGGCTGCCTTaGCTTTGCCTCCCTGTGTGGCTGGGAACCAGCGGGGCGGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: CRRSAPAAPSARGLP*LCLPVWLGTSGAGA Trigger: GGCACCCGCCCCGCTGGTTCCCAGCCACACAGGGAGGCAAAGCAAAGGCAGCCCGCGGGCGGATGGAGCTGCAGGGGCCGAGCGTCGGCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS GCA 72 bp | CGGCCCCTGCAGCTCCATCCGCCCGCGGGCTGCCTTTaGTTTGCCTCCCTGTGTGGCTGGGAACCAGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: RPLQLHPPAGCL*FASLCGWEPAG Trigger: CCCCGCTGGTTCCCAGCCACACAGGGAGGCAAAGCAAAGGCAGCCCGCGGGCGGATGGAGCTGCAGGGGCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CCA 72 bp | CCCGCGGGCTGCCTTTGCTTTGCCTCCCTGTGTGGCTaGGAACCAGCGGGGCGGGTGCCATCGTCCGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PAGCLCFASLCG*EPAGRVPSSGL Trigger: GAGGCCGGACGATGGCACCCGCCCCGCTGGTTCCCAGCCACACAGGGAGGCAAAGCAAAGGCAGCCCGCGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CAA 72 bp | CCCTGCAGCTCCATCCGCCCGCGGGCTGCCTTTGCTTaGCCTCCCTGTGTGGCTGGGAACCAGCGGGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: PCSSIRPRAAFA*PPCVAGNQRGG Trigger: CCCGCCCCGCTGGTTCCCAGCCACACAGGGAGGCAAAGCAAAGGCAGCCCGCGGGCGGATGGAGCTGCAGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CAA 90 bp | ACGCTCGGCCCCTGCAGCTCCATCCGCCCGCGGGCTGCCTTTGCTTaGCCTCCCTGTGTGGCTGGGAACCAGCGGGGCGGGTGCCATCGT | + |
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Preference number: 6 (lower is better) Translates to: TLGPCSSIRPRAAFA*PPCVAGNQRGGCHR Trigger: ACGATGGCACCCGCCCCGCTGGTTCCCAGCCACACAGGGAGGCAAAGCAAAGGCAGCCCGCGGGCGGATGGAGCTGCAGGGGCCGAGCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CAA 90 bp | CGCCCAGCCTCCCGGGGTCTACACCAGGCCACCTGCGCTCGCTGGTaGACAGCACAGCCCCTTCCGGCTAGCTTGACGGCCTCCGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: RPASRGLHQATCARW*TAQPLPASLTASAR Trigger: TCGGGCGGAGGCCGTCAAGCTAGCCGGAAGGGGCTGTGCTGTCAACCAGCGAGCGCAGGTGGCCTGGTGTAGACCCCGGGAGGCTGGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000583840.1 |
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| CDS GCA 72 bp | TTGCCTCCCTGTGTGGCTGGGAACCAGCGGGGCGGGTaGCATCGTCCGGCCTCACCCCCTACCCTGGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LPPCVAGNQRGG*HRPASPPTLGP Trigger: AGGACCCAGGGTAGGGGGTGAGGCCGGACGATGGCACCCGCCCCGCTGGTTCCCAGCCACACAGGGAGGCAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS GCA 72 bp | GGTGGCTGTGCGGCCGGAGGCTTTAAAGCTTTGTCTTaGATCCGCGGGCCACGCTGGAGGTCGGGCGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: GGCAAGGFKALS*IRGPRWRSGAR Trigger: GCGGGCGCCCGACCTCCAGCGTGGCCCGCGGATGCAAGACAAAGCTTTAAAGCCTCCGGCCGCACAGCCACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CCA 72 bp | GGCTTTAAAGCTTTGTCTTGCATCCGCGGGCCACGCTaGAGGTCGGGCGCCCGCAACCCTGCGCCAGGCCGT | + |
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Preference number: 6 (lower is better) Translates to: GFKALSCIRGPR*RSGARNPAPGR Trigger: ACGGCCTGGCGCAGGGTTGCGGGCGCCCGACCTCCAGCGTGGCCCGCGGATGCAAGACAAAGCTTTAAAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CCA 72 bp | GCCTCCCGGGGTCTACACCAGGCCACCTGCGCTCGCTaGTTGACAGCACAGCCCCTTCCGGCTAGCTTGACG | + |
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Preference number: 6 (lower is better) Translates to: ASRGLHQATCAR*LTAQPLPASLT Trigger: CGTCAAGCTAGCCGGAAGGGGCTGTGCTGTCAACCAGCGAGCGCAGGTGGCCTGGTGTAGACCCCGGGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000583840.1 |
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| CDS CAA 72 bp | GCTCGCTGGTTGACAGCACAGCCCCTTCCGGCTAGCTaGACGGCCTCCGCCCGATCCACCCACTGCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ARWLTAQPLPAS*TASARSTHCSR Trigger: CCTGGAGCAGTGGGTGGATCGGGCGGAGGCCGTCAAGCTAGCCGGAAGGGGCTGTGCTGTCAACCAGCGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579012.1 |
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| CDS CAA 72 bp | GCTCGCTGGTTGACAGCACAGCCCCTTCCGGCTAGCTaGACGGCCTCCGCCCGATCCACCCTTAGCCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: ARWLTAQPLPAS*TASARSTLSLG Trigger: CCCGAGGCTAAGGGTGGATCGGGCGGAGGCCGTCAAGCTAGCCGGAAGGGGCTGTGCTGTCAACCAGCGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583316.5 |
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| CDS CAA 72 bp | TCCCGGGGTCTACACCAGGCCACCTGCGCTCGCTGGTaGACAGCACAGCCCCTTCCGGCTAGCTTGACGGCC | + |
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Preference number: 6 (lower is better) Translates to: SRGLHQATCARW*TAQPLPASLTA Trigger: GGCCGTCAAGCTAGCCGGAAGGGGCTGTGCTGTCAACCAGCGAGCGCAGGTGGCCTGGTGTAGACCCCGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000583840.1 |
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| CDS CAA 90 bp | ACCTCCTGCGCTCGCTGGTTGACAGCACAGCCCCTTCCGGCTAGCTaGACGGCCTCCGCCCGATCCACCCTTAGCCTCGGGCTGGACTTA | + |
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Preference number: 6 (lower is better) Translates to: TSCARWLTAQPLPAS*TASARSTLSLGLDL Trigger: TAAGTCCAGCCCGAGGCTAAGGGTGGATCGGGCGGAGGCCGTCAAGCTAGCCGGAAGGGGCTGTGCTGTCAACCAGCGAGCGCAGGAGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583316.5 |
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| CDS CAA 72 bp | CTAGTGGGTGGCTGTGCGGCCGGAGGCTTTAAAGCTTaGTCTTGCATCCGCGGGCCACGCTGGAGGTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: LVGGCAAGGFKA*SCIRGPRWRSG Trigger: GCCCGACCTCCAGCGTGGCCCGCGGATGCAAGACAAAGCTTTAAAGCCTCCGGCCGCACAGCCACCCACTAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CAA 72 bp | GCTCGCTGGTTGACAGCACAGCCCCTTCCGGCTAGCTaGACGGCCTCCGCCCGATCCACCCTGCGTGAATAC | + |
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Preference number: 6 (lower is better) Translates to: ARWLTAQPLPAS*TASARSTLREY Trigger: GTATTCACGCAGGGTGGATCGGGCGGAGGCCGTCAAGCTAGCCGGAAGGGGCTGTGCTGTCAACCAGCGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583840.1 |
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| CDS GCA 72 bp | CCCGCTGGCCCCGTGGGTATGCAGCTCGGTGGACCATaGAGACCTATGTGGATTGTGCCTTCCGAGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: PAGPVGMQLGGP*RPMWIVPSELG Trigger: TCCCAGCTCGGAAGGCACAATCCACATAGGTCTGCATGGTCCACCGAGCTGCATACCCACGGGGCCAGCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580197.5 |
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| CDS CAA 90 bp | GGCCTGTGGCCCCAGCTCCTCAGGGGACTGAGGCAGGAGGATTGCTaGAGCAGTCCTCAGGCAGTGGAGGCACCAGTGACCTGTGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: GLWPQLLRGLRQEDC*SSPQAVEAPVTCGN Trigger: GTTACCACAGGTCACTGGTGCCTCCACTGCCTGAGGACTGCTCAAGCAATCCTCCTGCCTCAGTCCCCTGAGGAGCTGGGGCCACAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000578278.5 ENST00000580197.5 ENST00000581571.5 |
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| CDS GCA 72 bp | GGGCCCTGTGTAAATCAGACGCCGCCTCCTCAAGCCTaGCTATCAAGTCTGCTGTGGTCCACCTCAGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: GPCVNQTPPPQA*LSSLLWSTSGR Trigger: CCGGCCTGAGGTGGACCACAGCAGACTTGATAGGCAGGCTTGAGGAGGCGGCGTCTGATTTACACAGGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579012.1 |
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| CDS GCA 72 bp | CCCGCTGGCCCCGTGGGTATGCAGCTCGGTGGACCATaGAGACCTATGTGGATTGTGCCTTCCGAGCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PAGPVGMQLGGP*RPMWIVPSELR Trigger: TCTGAGCTCGGAAGGCACAATCCACATAGGTCTGCATGGTCCACCGAGCTGCATACCCACGGGGCCAGCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000578497.5 ENST00000581571.5 ENST00000581725.5 ENST00000583316.5 |
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| CDS CAA 90 bp | GCCACCTGCGCTCGCTGGTTGACAGCACAGCCCCTTCCGGCTAGCTaGACGGCCTCCGCCCGATCCACCCTGCGTGAATACAATTATTTC | + |
|
Preference number: 6 (lower is better) Translates to: ATCARWLTAQPLPAS*TASARSTLREYNYF Trigger: GAAATAATTGTATTCACGCAGGGTGGATCGGGCGGAGGCCGTCAAGCTAGCCGGAAGGGGCTGTGCTGTCAACCAGCGAGCGCAGGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583840.1 |
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| CDS CCA 72 bp | ACTGTCCCGGCAGACGCTCTCACCTTAGCCTCGGGCTaGACTTACTGCTTCCAAAAGCGCTGGGCACAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TVPADALTLASG*TYCFQKRWAQP Trigger: AGGCTGTGCCCAGCGCTTTTGGAAGCAGTAAGTCCAGCCCGAGGCTAAGGTGAGAGCGTCTGCCGGGACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583840.1 |
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| CDS CAA 90 bp | GCCCCGTGGGTATGCAGCTCGGTGGACCATGCAGACCTATGTGGATaGTGCCTTCCGAGCTCAGACAGTGATGCTGCTTCAGCTGGACGG | + |
|
Preference number: 6 (lower is better) Translates to: APWVCSSVDHADLCG*CLPSSDSDAASAGR Trigger: CCGTCCAGCTGAAGCAGCATCACTGTCTGAGCTCGGAAGGCACAATCCACATAGGTCTGCATGGTCCACCGAGCTGCATACCCACGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000578497.5 ENST00000581571.5 ENST00000581725.5 ENST00000583316.5 |
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| CDS CAA 90 bp | TGCCTTCCGAGCTCAGACAGTGATGCTGCTTCAGCTGGACGGCTCTaGAATGCCTCCATAGAGGAGACGTGGTCGCTGCCTCCTCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CLPSSDSDAASAGRL*NASIEETWSLPPLV Trigger: CACCAGAGGAGGCAGCGACCACGTCTCCTCTATGGAGGCATTCAAGAGCCGTCCAGCTGAAGCAGCATCACTGTCTGAGCTCGGAAGGCA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000578497.5 ENST00000581571.5 ENST00000581725.5 ENST00000583316.5 |
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| CDS CAA 90 bp | GATGCCTCTCTCTCAGACAGTGATGCTGCTTCAGCTGGACGGCTCTaGAATGCCTCCATAGAGGAGACGTGGTCGCTGCCTCCTCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: DASLSDSDAASAGRL*NASIEETWSLPPLV Trigger: CACCAGAGGAGGCAGCGACCACGTCTCCTCTATGGAGGCATTCAAGAGCCGTCCAGCTGAAGCAGCATCACTGTCTGAGAGAGAGGCATC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579012.1 |
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| CDS TCA 72 bp | ATTCGGTGGCAGTGGCCTGAATCCCCATGCCCACTGTaGCAGAGCAGGAGCACCATCCTCTCGGACAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: IRWQWPESPCPL*QSRSTILSDKH Trigger: GTGTTTGTCCGAGAGGATGGTGCTCCTGCTCTGTCACAGTGGGCATGGGGATTCAGGCCACTGCCACCGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000578278.5 ENST00000580197.5 ENST00000581571.5 |
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| CDS CCA 72 bp | ACGCCGCCTCCTCAAGCCTGCCTATCAAGTCTGCTGTaGTCCACCTCAGGCCGGCTTTTTCCCTTTTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: TPPPQACLSSLL*STSGRLFPFWM Trigger: CATCCAAAAGGGAAAAAGCCGGCCTGAGGTGGACCACAGCAGACTTGATAGGCAGGCTTGAGGAGGCGGCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000579012.1 |
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| CDS CAA 90 bp | GGTGGTGGTGGCGTGTGGTTGTGGCGGTGTGTGGTTGTGTCGTCCTaGCTGTTGCCTTACTTGTCTTGGAACTCTTCAGCAGGCAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGGGVWLWRCVVVSS*LLPYLSWNSSAGRG Trigger: TCCTCTGCCTGCTGAAGAGTTCCAAGACAAGTAAGGCAACAGCAAGGACGACACAACCACACACCGCCACAACCACACGCCACCACCACC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CAA 90 bp | GTGTGTGGTGTGGTTGTGGTAGTGTGTGGTGGTGGTGGCGTGTGGTaGTGGCGGTGTGTGGTTGTGTCGTCCTTGCTGTTGCCTTACTTG | + |
|
Preference number: 6 (lower is better) Translates to: VCGVVVVVCGGGGVW*WRCVVVSSLLLPYL Trigger: CAAGTAAGGCAACAGCAAGGACGACACAACCACACACCGCCACAACCACACGCCACCACCACCACACACTACCACAACCACACCACACAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS GCA 72 bp | ATCAGACGCCGCCTCCTCAAGCCTGCCTATCAAGTCTaGTGTGGTCCACCTCAGGCCGGCTTTTTCCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: IRRRLLKPAYQV*CGPPQAGFFPF Trigger: AAAAGGGAAAAAGCCGGCCTGAGGTGGACCACAGCAGACTTGATAGGCAGGCTTGAGGAGGCGGCGTCTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000579012.1 |
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| CDS CAA 72 bp | CTCTCAGACAGTGATGCTGCTTCAGCTGGACGGCTCTaGAATGCCTCCATAGAGGAGACGTGGTCGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSDSDAASAGRL*NASIEETWSLP Trigger: AGGCAGCGACCACGTCTCCTCTATGGAGGCATTCAAGAGCCGTCCAGCTGAAGCAGCATCACTGTCTGAGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579012.1 |
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| CDS CAA 72 bp | AGCTCAGACAGTGATGCTGCTTCAGCTGGACGGCTCTaGAATGCCTCCATAGAGGAGACGTGGTCGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSDSDAASAGRL*NASIEETWSLP Trigger: AGGCAGCGACCACGTCTCCTCTATGGAGGCATTCAAGAGCCGTCCAGCTGAAGCAGCATCACTGTCTGAGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000578497.5 ENST00000581571.5 ENST00000581725.5 ENST00000583316.5 |
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| CDS CAA 72 bp | GTGGTGGTGGTGGCGTGTGGTTGTGGCGGTGTGTGGTaGTGTCGTCCTTGCTGTTGCCTTACTTGTCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VVVVACGCGGVW*CRPCCCLTCLG Trigger: TCCAAGACAAGTAAGGCAACAGCAAGGACGACACAACCACACACCGCCACAACCACACGCCACCACCACCAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CAA 90 bp | CCTATCAAGTCTGCTGTGGTCCACCTCAGGCCGGCTTTTTCCCTTTaGGATGCCTCTCTCTCAGACAGTGATGCTGCTTCAGCTGGACGG | + |
|
Preference number: 6 (lower is better) Translates to: PIKSAVVHLRPAFSL*DASLSDSDAASAGR Trigger: CCGTCCAGCTGAAGCAGCATCACTGTCTGAGAGAGAGGCATCCAAAAGGGAAAAAGCCGGCCTGAGGTGGACCACAGCAGACTTGATAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000579012.1 |
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| CDS GCA 72 bp | TGCAGCTCGGTGGACCATGCAGACCTATGTGGATTGTaGCTTCCGAGCTCAGACAGTGATGCTGCTTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CSSVDHADLCGL*LPSSDSDAASA Trigger: AGCTGAAGCAGCATCACTGTCTGAGCTCGGAAGGCACAATCCACATAGGTCTGCATGGTCCACCGAGCTGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000578497.5 ENST00000581571.5 ENST00000581725.5 ENST00000583316.5 |
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| CDS CCA 72 bp | GCTGGACGGCTCTTGAATGCCTCCATAGAGGAGACGTaGTCGCTGCCTCCTCTGGTGGGGAAAAACATTCTA | + |
|
Preference number: 6 (lower is better) Translates to: AGRLLNASIEET*SLPPLVGKNIL Trigger: TAGAATGTTTTTCCCCACCAGAGGAGGCAGCGACCACGTCTCCTCTATGGAGGCATTCAAGAGCCGTCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000578497.5 ENST00000579012.1 ENST00000581571.5 ENST00000581725.5 ENST00000583316.5 |
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| CDS CCA 72 bp | GTGGGTATGCAGCTCGGTGGACCATGCAGACCTATGTaGATTGTGCCTTCCGAGCTGGGAATAGACACGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VGMQLGGPCRPM*IVPSELGIDTF Trigger: GAACGTGTCTATTCCCAGCTCGGAAGGCACAATCCACATAGGTCTGCATGGTCCACCGAGCTGCATACCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580197.5 |
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| CDS CCA 72 bp | TGTGTGGTGGTGGTGGCGTGTGGTTGTGGCGGTGTGTaGTTGTGTCGTCCTTGCTGTTGCCTTACTTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: CVVVVACGCGGV*LCRPCCCLTCL Trigger: AAGACAAGTAAGGCAACAGCAAGGACGACACAACCACACACCGCCACAACCACACGCCACCACCACCACACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS TCA 72 bp | AGACCTATGTGGATTGTGCCTTCCGAGCTCAGACAGTaGTGCTGCTTCAGCTGGACGGCTCTTGAATGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RPMWIVPSELRQ*CCFSWTALECL Trigger: GAGGCATTCAAGAGCCGTCCAGCTGAAGCAGCATCACTGTCTGAGCTCGGAAGGCACAATCCACATAGGTCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000578497.5 ENST00000581571.5 ENST00000581725.5 ENST00000583316.5 |
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| CDS TCA 72 bp | AGCAAGTGCGGGGTGACCCAGTTCAAGGCACTGTCATaGACACAGGATGACCAGGTTCTTCTGGCTTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: SKCGVTQFKALS*TQDDQVLLACT Trigger: AGTGCAAGCCAGAAGAACCTGGTCATCCTGTGTTCATGACAGTGCCTTGAACTGGGTCACCCCGCACTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CAA 72 bp | CCTCACAATTTAGTTCTGGGCTCTGTGCTTGGGCTCTaGAAATTCGGTGGCAGTGGCCTGAATCCCCATGCC | + |
|
Preference number: 6 (lower is better) Translates to: PHNLVLGSVLGL*KFGGSGLNPHA Trigger: GGCATGGGGATTCAGGCCACTGCCACCGAATTTCAAGAGCCCAAGCACAGAGCCCAGAACTAAATTGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000578278.5 ENST00000580197.5 ENST00000581571.5 |
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| CDS CAA 72 bp | GTATGCAGCTCGGTGGACCATGCAGACCTATGTGGATaGTGCCTTCCGAGCTCAGACAGTGATGCTGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VCSSVDHADLCG*CLPSSDSDAAS Trigger: TGAAGCAGCATCACTGTCTGAGCTCGGAAGGCACAATCCACATAGGTCTGCATGGTCCACCGAGCTGCATAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000578497.5 ENST00000581571.5 ENST00000581725.5 ENST00000583316.5 |
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| CDS CAA 90 bp | ACTGGTTGGTTAAAGCAGCCTGAGCAGCTCAGAGGGAGGTTGTGGTaGTGTGTTGTGGTGCTGGTGTGTGGTTGTGGTTGTGGTGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TGWLKQPEQLRGRLW*CVVVLVCGCGCGVV Trigger: CACAACACCACAACCACAACCACACACCAGCACCACAACACACAACCACAACCTCCCTCTGAGCTGCTCAGGCTGCTTTAACCAACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS TCA 72 bp | GGCTTTTTCCCTTTTGGATGCCTCTCTCTCAGACAGTaGTGCTGCTTCAGCTGGACGGCTCTTGAATGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GFFPFGCLSLRQ*CCFSWTALECL Trigger: GAGGCATTCAAGAGCCGTCCAGCTGAAGCAGCATCACTGTCTGAGAGAGAGGCATCCAAAAGGGAAAAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000579012.1 |
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| CDS GCA 72 bp | GTGGTTAACACCTCCTTAGCCTCGGGCTGGACTTACTaGTTCCAAAAGCGCTGGGCACAGCCTTATATGACT | + |
|
Preference number: 6 (lower is better) Translates to: VVNTSLASGWTY*FQKRWAQPYMT Trigger: AGTCATATAAGGCTGTGCCCAGCGCTTTTGGAAGCAGTAAGTCCAGCCCGAGGCTAAGGAGGTGTTAACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581571.5 |
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| CDS CAA 72 bp | CGGTGTGTGGTTGTGTCGTCCTTGCTGTTGCCTTACTaGTCTTGGAACTCTTCAGCAGGCAGAGGAGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RCVVVSSLLLPY*SWNSSAGRGER Trigger: TCTCTCTCCTCTGCCTGCTGAAGAGTTCCAAGACAAGTAAGGCAACAGCAAGGACGACACAACCACACACCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CAA 72 bp | TTAAAGCAGCCTGAGCAGCTCAGAGGGAGGTTGTGGTaGTGTGTTGTGGTGCTGGTGTGTGGTTGTGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LKQPEQLRGRLW*CVVVLVCGCGC Trigger: ACAACCACAACCACACACCAGCACCACAACACACAACCACAACCTCCCTCTGAGCTGCTCAGGCTGCTTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CAA 90 bp | TGGTTGTGGCGGTGTGTGGTTGTGTCGTCCTTGCTGTTGCCTTACTaGTCTTGGAACTCTTCAGCAGGCAGAGGAGAGAGAGGTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: WLWRCVVVSSLLLPY*SWNSSAGRGERGSS Trigger: TGAAGAACCTCTCTCTCCTCTGCCTGCTGAAGAGTTCCAAGACAAGTAAGGCAACAGCAAGGACGACACAACCACACACCGCCACAACCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CAA 90 bp | TTCCAAACTGGTTGGTTAAAGCAGCCTGAGCAGCTCAGAGGGAGGTaGTGGTTGTGTGTTGTGGTGCTGGTGTGTGGTTGTGGTTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: FQTGWLKQPEQLRGR*WLCVVVLVCGCGCG Trigger: ACCACAACCACAACCACACACCAGCACCACAACACACAACCACAACCTCCCTCTGAGCTGCTCAGGCTGCTTTAACCAACCAGTTTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS GCA 72 bp | AGCACCATCCTCTCGGACAAACACCGCCACTTTAAGTaGCAGCTCCCTTTCCAGCCTCATGCATTTCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: STILSDKHRHFK*QLPFQPHAFQE Trigger: TTCTTGAAATGCATGAGGCTGGAAAGGGAGCTGGCACTTAAAGTGGCGGTGTTTGTCCGAGAGGATGGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000578278.5 ENST00000580197.5 ENST00000581571.5 |
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| CDS CAA 90 bp | TTTTTAAACCCTCACAATTTAGTTCTGGGCTCTGTGCTTGGGCTCTaGAAATTCGGTGGCAGTGGCCTGAATCCCCATGCCCACTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: FLNPHNLVLGSVLGL*KFGGSGLNPHAHCD Trigger: GTCACAGTGGGCATGGGGATTCAGGCCACTGCCACCGAATTTCAAGAGCCCAAGCACAGAGCCCAGAACTAAATTGTGAGGGTTTAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000578278.5 ENST00000580197.5 ENST00000581571.5 |
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| CDS TCA 72 bp | GGTGACCCAGTTCAAGGCACTGTCATGAACACAGGATaGCCAGGTTCTTCTGGCTTGCACTTGCAAACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GDPVQGTVMNTG*PGSSGLHLQTF Trigger: AAAGGTTTGCAAGTGCAAGCCAGAAGAACCTGGTCATCCTGTGTTCATGACAGTGCCTTGAACTGGGTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS GCA 72 bp | ATTTCAAGAAAATCACTTCTCTTCTGTAGTCCCAGCTaGTTAGGAGGCGGAGACGGGAAGATCCCTCGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ISRKSLLFCSPS*LGGGDGKIPRA Trigger: AGCTCGAGGGATCTTCCCGTCTCCGCCTCCTAAGCAGCTGGGACTACAGAAGAGAAGTGATTTTCTTGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578278.5 |
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| CDS CAA 72 bp | AATCAAGCTGCAGGCACAGACAAGCAAGCTGGAAGCTaGCATAGGCTAATACTGGTGGTTGTGCCAACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: NQAAGTDKQAGS*HRLILVVVPTE Trigger: CTCTGTTGGCACAACCACCAGTATTAGCCTATGCAAGCTTCCAGCTTGCTTGTCTGTGCCTGCAGCTTGATT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579012.1 |
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| CDS CAA 72 bp | CGCTCAGTCAAGGTGAGTAGGGCAGGCAGTCTTTTCTaGAGTCTCTTCGTTTCTGACACCTTGTTTGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RSVKVSRAGSLF*SLFVSDTLFGS Trigger: ACTCCCAAACAAGGTGTCAGAAACGAAGAGACTCAAGAAAAGACTGCCTGCCCTACTCACCTTGACTGAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CAA 90 bp | CTTCGTCAGCGCTCAGTCAAGGTGAGTAGGGCAGGCAGTCTTTTCTaGAGTCTCTTCGTTTCTGACACCTTGTTTGGGAGTCAGGATTAT | + |
|
Preference number: 6 (lower is better) Translates to: LRQRSVKVSRAGSLF*SLFVSDTLFGSQDY Trigger: ATAATCCTGACTCCCAAACAAGGTGTCAGAAACGAAGAGACTCAAGAAAAGACTGCCTGCCCTACTCACCTTGACTGAGCGCTGACGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS GCA 72 bp | CAGTGGGCCTTAATAAGCACATTCTTTCCCTTCAGGTaGACTAAGATAGGGAAGCTAAAAGCAGACCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QWALISTFFPFR*TKIGKLKADLG Trigger: CCCCAGGTCTGCTTTTAGCTTCCCTATCTTAGTGCACCTGAAGGGAAAGAATGTGCTTATTAAGGCCCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580197.5 |
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| CDS CCA 72 bp | TTTAAACCCTCACAATTTAGTTCTGGGCTCTGTGCTTaGGCTCTTGAAATTCGGTGGCAGTGGCCTGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: FKPSQFSSGLCA*ALEIRWQWPES Trigger: GGATTCAGGCCACTGCCACCGAATTTCAAGAGCCCAAGCACAGAGCCCAGAACTAAATTGTGAGGGTTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000578278.5 ENST00000580197.5 ENST00000581571.5 |
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| CDS TCA 72 bp | TTTCAGTTTCTCAAGTCAGAAATCTTGGAGTCCCCTTaGCGACTTTCTTCTTGTCACATCCCACACCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FQFLKSEILESP*RLSSCHIPHQP Trigger: GGGCTGGTGTGGGATGTGACAAGAAGAAAGTCGTCAAGGGGACTCCAAGATTTCTGACTTGAGAAACTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS TCA 72 bp | TTTGTTCCTCCTACATACTTGCTACTCTGTATCCTTTaGCCTAAAAGGGGACGCGTGCTAACCTGGAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: FVPPTYLLLCIL*PKRGRVLTWRQ Trigger: CTGTCTCCAGGTTAGCACGCGTCCCCTTTTAGGTCAAAGGATACAGAGTAGCAAGTATGTAGGAGGAACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS GCA 72 bp | TCTTACACACTGGAGCCTAGGGAAAGGATCATTCTCTaGCCACTTCCATTACCTGAGAAAAGAACGCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SYTLEPRERIIL*PLPLPEKRTPE Trigger: TTCTGGCGTTCTTTTCTCAGGTAATGGAAGTGGGCAGAGAATGATCCTTTCCCTAGGCTCCAGTGTGTAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580197.5 |
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| CDS GCA 72 bp | CTTGAAGCAACAGACAGGAAGAACCCTTATCTGATCTaGTCCGCAACTATTGGAAACATTGAAGGAGACAGT | + |
|
Preference number: 6 (lower is better) Translates to: LEATDRKNPYLI*SATIGNIEGDS Trigger: ACTGTCTCCTTCAATGTTTCCAATAGTTGCGGAGCAGATCAGATAAGGGTTCTTCCTGTCTGTTGCTTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000578497.5 ENST00000580197.5 ENST00000581571.5 ENST00000583316.5 |
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| CDS CCA 72 bp | ACCCGCGTGTATAGTAAGGAGCAGACAAGATGGTACTaGCCAAGTAGAAAGCCCATTTGTTTAATAAGATTA | + |
|
Preference number: 6 (lower is better) Translates to: TRVYSKEQTRWY*PSRKPICLIRL Trigger: TAATCTTATTAAACAAATGGGCTTTCTACTTGGCCAGTACCATCTTGTCTGCTCCTTACTATACACGCGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000579012.1 ENST00000580197.5 |
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| CDS CCA 72 bp | TCACAATGTTTCTTCAGCATCTATTATGACAGTTCTTaGAACTATACGTGCCAGATTACAGTTCACACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SQCFFSIYYDSS*NYTCQITVHTW Trigger: CCAGGTGTGAACTGTAATCTGGCACGTATAGTTCCAAGAACTGTCATAATAGATGCTGAAGAAACATTGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000580197.5 ENST00000581571.5 |
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| CDS CAA 72 bp | CTGGCTTGCACTTGCAAACCTTTAGACGATCACTTTTaGCCTCTTAAACAGCTTTCTTACTATATATTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LACTCKPLDDHF*PLKQLSYYIFC Trigger: GCAGAATATATAGTAAGAAAGCTGTTTAAGAGGCAAAAAGTGATCGTCTAAAGGTTTGCAAGTGCAAGCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CAA 72 bp | ACGACAGTCCCGATGTTGTTCATTAGATCTTTTGATTaGTTCCTCCTACATACTTGCTACTCTGTATCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: TTVPMLFIRSFD*FLLHTCYSVSF Trigger: AAAGGATACAGAGTAGCAAGTATGTAGGAGGAACAAATCAAAAGATCTAATGAACAACATCGGGACTGTCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CAA 90 bp | ACTATAGAAACGACAGTCCCGATGTTGTTCATTAGATCTTTTGATTaGTTCCTCCTACATACTTGCTACTCTGTATCCTTTGACCTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: TIETTVPMLFIRSFD*FLLHTCYSVSFDLK Trigger: TTTTAGGTCAAAGGATACAGAGTAGCAAGTATGTAGGAGGAACAAATCAAAAGATCTAATGAACAACATCGGGACTGTCGTTTCTATAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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| CDS CAA 72 bp | TTAACACAACACACTATAGAAACGACAGTCCCGATGTaGTTCATTAGATCTTTTGATTTGTTCCTCCTACAT | + |
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Preference number: 6 (lower is better) Translates to: LTQHTIETTVPM*FIRSFDLFLLH Trigger: ATGTAGGAGGAACAAATCAAAAGATCTAATGAACAACATCGGGACTGTCGTTTCTATAGTGTGTTGTGTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581725.5 |
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