Pregenerated sensors for LINC00667 (Homo sapiens)
Ensembl gene IDs: ENSG00000263753Ensembl transcript IDs: ENST00000577439.2, ENST00000580082.2, ENST00000580684.6, ENST00000581471.2, ENST00000582008.6, ENST00000582363.1, ENST00000653507.1, ENST00000653571.1, ENST00000654021.1, ENST00000654155.1, ENST00000655685.1, ENST00000656810.1, ENST00000657129.1, ENST00000657250.1, ENST00000657955.1, ENST00000658226.1, ENST00000658607.1, ENST00000658946.1, ENST00000660030.1, ENST00000660561.1, ENST00000661357.1, ENST00000661829.1, ENST00000662359.1, ENST00000662415.1, ENST00000662652.1, ENST00000662932.1, ENST00000663393.1, ENST00000664934.1, ENST00000665272.1, ENST00000665442.1, ENST00000665541.1, ENST00000666552.1, ENST00000666950.1, ENST00000668495.1, ENST00000668807.1, ENST00000669192.1, ENST00000669574.1, ENST00000670111.1, ENST00000670993.1, ENST00000671289.1, ENST00000671312.1
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGCGGCGCTGCCGGAAGTGCGTGTCGGCGCGGGGGCGGATCCCGGTaGCGGCGAGGGGCGGACTCCGCGGACAAGGCCAGGCCTAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: RGAAGSACRRGGGSR*RRGADSADKARPSL Trigger: AAGGCTAGGCCTGGCCTTGTCCGCGGAGTCCGCCCCTCGCCGCCACCGGGATCCGCCCCCGCGCCGACACGCACTTCCGGCAGCGCCGCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000581471.2 ENST00000665272.1 |
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| CDS GCA 90 bp | CATCATGACAGCCAACGCGTCCATCCTGCGCCTCCCCGCAGGCCTTaGTCCCCGCTCGGTCCCTCCCGGCCGCGGCGCTGCCGGAAGTGC | + |
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Preference number: 5 (lower is better) Translates to: HHDSQRVHPAPPRRP*SPLGPSRPRRCRKC Trigger: GCACTTCCGGCAGCGCCGCGGCCGGGAGGGACCGAGCGGGGAGCAAGGCCTGCGGGGAGGCGCAGGATGGACGCGTTGGCTGTCATGATG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000581471.2 ENST00000582008.6 ENST00000657250.1 ENST00000665272.1 ENST00000670111.1 |
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| CDS CCA 90 bp | AGGCCAGGCCTAGCCTTGAGCTCCGTCGGGCAGGGCCGCCGGGATTaGTGTCCGGCAGAGCGTGAGCCCAGCGGGCTGGAGTCGGCGAGC | + |
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Preference number: 5 (lower is better) Translates to: RPGLALSSVGQGRRD*CPAEREPSGLESAS Trigger: GCTCGCCGACTCCAGCCCGCTGGGCTCACGCTCTGCCGGACACCAATCCCGGCGGCCCTGCCCGACGGAGCTCAAGGCTAGGCCTGGCCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000581471.2 ENST00000665272.1 |
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| CDS CCA 90 bp | AGGGCCGCCGGGATTGGTGTCCGGCAGAGCGTGAGCCCAGCGGGCTaGAGTCGGCGAGCGGGAGTGAAAGAAGAAAAGCTAGAGAGCGAA | + |
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Preference number: 5 (lower is better) Translates to: RAAGIGVRQSVSPAG*SRRAGVKEEKLESE Trigger: TTCGCTCTCTAGCTTTTCTTCTTTCACTCCCGCTCGCCGACTCCAGCCCGCTGGGCTCACGCTCTGCCGGACACCAATCCCGGCGGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581471.2 ENST00000665272.1 |
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| CDS TCA 90 bp | AAAGGTGGCCAAAAGCCGTCTCTAGAAACGGCGGTGGCAGCGGCGTaGTTCTGGGAGGTCCATTCAACTTTTAACAGGTCCTGGGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: KGGQKPSLETAVAAA*FWEVHSTFNRSWAV Trigger: CACTGCCCAGGACCTGTTAAAAGTTGAATGGACCTCCCAGAATCACGCCGCTGCCACCGCCGTTTCTAGAGACGGCTTTTGGCCACCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 35 transcripts: ENST00000580082.2 ENST00000580684.6 ENST00000581471.2 ENST00000582008.6 ENST00000582363.1 ENST00000653507.1 ENST00000654021.1 ENST00000654155.1 ENST00000655685.1 ENST00000656810.1 ENST00000657129.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000658946.1 ENST00000660030.1 ENST00000660561.1 ENST00000661357.1 ENST00000662359.1 ENST00000662415.1 ENST00000662652.1 ENST00000662932.1 ENST00000663393.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666552.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000669574.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS TCA 90 bp | TTCAGTGTTGTCAGGCACACTAACCCGGGAAGCCGTCTCTGGGCCTaGACTATCCAAATTAGTGTCCGAGGAAGTGTGACAAATGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: FSVVRHTNPGSRLWA*TIQISVRGSVTNAG Trigger: GCCTGCATTTGTCACACTTCCTCGGACACTAATTTGGATAGTTCAGGCCCAGAGACGGCTTCCCGGGTTAGTGTGCCTGACAACACTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 32 transcripts: ENST00000577439.2 ENST00000580684.6 ENST00000581471.2 ENST00000582008.6 ENST00000582363.1 ENST00000654021.1 ENST00000655685.1 ENST00000656810.1 ENST00000657129.1 ENST00000657250.1 ENST00000657955.1 ENST00000658226.1 ENST00000658607.1 ENST00000658946.1 ENST00000660030.1 ENST00000660561.1 ENST00000662359.1 ENST00000662415.1 ENST00000662932.1 ENST00000663393.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666552.1 ENST00000668495.1 ENST00000668807.1 ENST00000669192.1 ENST00000669574.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS TCA 90 bp | CTTCTCTGGCCATTGGACTTGACTGAATTACACCTCCAGCTTTCCTaGTTCTCCAGCTTGCAGATGGCAGATCGTGGGTCTTCTCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: LLWPLDLTELHLQLS*FSSLQMADRGSSQP Trigger: AGGCTGAGAAGACCCACGATCTGCCATCTGCAAGCTGGAGAATCAGGAAAGCTGGAGGTGTAATTCAGTCAAGTCCAATGGCCAGAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662415.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS TCA 90 bp | GCCGTCTCTGGGCCTGAACTATCCAAATTAGTGTCCGAGGAAGTGTaGCAAATGCAGGCCCTTCCAAGTTTGACCCTGATTCTCAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: AVSGPELSKLVSEEV*QMQALPSLTLILKG Trigger: ACCTTTGAGAATCAGGGTCAAACTTGGAAGGGCCTGCATTTGTCACACTTCCTCGGACACTAATTTGGATAGTTCAGGCCCAGAGACGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 37 transcripts: ENST00000577439.2 ENST00000580082.2 ENST00000580684.6 ENST00000581471.2 ENST00000582008.6 ENST00000582363.1 ENST00000653507.1 ENST00000654021.1 ENST00000654155.1 ENST00000655685.1 ENST00000656810.1 ENST00000657129.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000658946.1 ENST00000660030.1 ENST00000660561.1 ENST00000661357.1 ENST00000662359.1 ENST00000662415.1 ENST00000662652.1 ENST00000662932.1 ENST00000663393.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666552.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000669192.1 ENST00000669574.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS GCA 90 bp | GATAGGGCCTCCCTTATGTGTCCATTGGCCCCATTGTGGATATACTaGAGTTTAGCCAGAAAGACCTGGATGTGGAGGTTAAAGCCACAC | + |
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Preference number: 5 (lower is better) Translates to: DRASLMCPLAPLWIY*SLARKTWMWRLKPH Trigger: GTGTGGCTTTAACCTCCACATCCAGGTCTTTCTGGCTAAACTGCAGTATATCCACAATGGGGCCAATGGACACATAAGGGAGGCCCTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 23 transcripts: ENST00000577439.2 ENST00000582363.1 ENST00000653507.1 ENST00000653571.1 ENST00000654021.1 ENST00000655685.1 ENST00000656810.1 ENST00000657129.1 ENST00000657955.1 ENST00000658226.1 ENST00000658607.1 ENST00000658946.1 ENST00000662415.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666552.1 ENST00000668495.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 ENST00000671312.1 |
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| CDS CCA 90 bp | ATGAGGAAATTATGCAGGTCCAGAGGAAGACCTGAGTGGATGACTTaGCTCTTCCAGGTGAGCCTGATAAACAGGTATGGATCCGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: MRKLCRSRGRPEWMT*LFQVSLINRYGSVP Trigger: GGGAACGGATCCATACCTGTTTATCAGGCTCACCTGGAAGAGCCAAGTCATCCACTCAGGTCTTCCTCTGGACCTGCATAATTTCCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000582363.1 ENST00000654021.1 ENST00000658607.1 ENST00000668495.1 ENST00000670111.1 ENST00000670993.1 |
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| CDS CCA 90 bp | TGTTCCTGTGATAGGGCCTCCCTTATGTGTCCATTGGCCCCATTGTaGATATACTGCAGTTTAGCCAGAAAGACCTGGATGTGGAGGTTA | + |
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Preference number: 5 (lower is better) Translates to: CSCDRASLMCPLAPL*IYCSLARKTWMWRL Trigger: TAACCTCCACATCCAGGTCTTTCTGGCTAAACTGCAGTATATCCACAATGGGGCCAATGGACACATAAGGGAGGCCCTATCACAGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 23 transcripts: ENST00000577439.2 ENST00000582363.1 ENST00000653507.1 ENST00000653571.1 ENST00000654021.1 ENST00000655685.1 ENST00000656810.1 ENST00000657129.1 ENST00000657955.1 ENST00000658226.1 ENST00000658607.1 ENST00000658946.1 ENST00000662415.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666552.1 ENST00000668495.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 ENST00000671312.1 |
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| CDS TCA 90 bp | CTCTTGGATATCAGTACACTTGCTTCTCTGGCCATTGGACTTGACTaGATTACACCTCCAGCTTTCCTGATTCTCCAGCTTGCAGATGGC | + |
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Preference number: 5 (lower is better) Translates to: LLDISTLASLAIGLD*ITPPAFLILQLADG Trigger: GCCATCTGCAAGCTGGAGAATCAGGAAAGCTGGAGGTGTAATTCAGTCAAGTCCAATGGCCAGAGAAGCAAGTGTACTGATATCCAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662415.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS TCA 90 bp | TTCCTCTTATTTGGGGCAGTACCAGTCCATACCAGCTGCGATTTGTaGGTGGACTTGATAAGAAACTCTGGGGATAGGGCCCAGGAATTT | + |
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Preference number: 5 (lower is better) Translates to: FLLFGAVPVHTSCDL*VDLIRNSGDRAQEF Trigger: AAATTCCTGGGCCCTATCCCCAGAGTTTCTTATCAAGTCCACTCACAAATCGCAGCTGGTATGGACTGGTACTGCCCCAAATAAGAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000580082.2 ENST00000669574.1 |
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| CDS TCA 90 bp | CCCAATCTAGTAAATGAGGAAATTATGCAGGTCCAGAGGAAGACCTaGGTGGATGACTTGGCTCTTCCAGGTGAGCCTGATAAACAGGTA | + |
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Preference number: 5 (lower is better) Translates to: PNLVNEEIMQVQRKT*VDDLALPGEPDKQV Trigger: TACCTGTTTATCAGGCTCACCTGGAAGAGCCAAGTCATCCACTCAGGTCTTCCTCTGGACCTGCATAATTTCCTCATTTACTAGATTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000582363.1 ENST00000654021.1 ENST00000658607.1 ENST00000668495.1 ENST00000670111.1 ENST00000670993.1 |
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| CDS TCA 90 bp | CTTGCAGATGGCAGATCGTGGGTCTTCTCAGCCTCCGTAATCATATaGGCCAATTCCTACAATAAACCTCTCTGTCTCTCTCATTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: LADGRSWVFSASVII*ANSYNKPLCLSHSV Trigger: AACAGAATGAGAGAGACAGAGAGGTTTATTGTAGGAATTGGCTCATATGATTACGGAGGCTGAGAAGACCCACGATCTGCCATCTGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662415.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS GCA 90 bp | CCATCACCTAATAAAGACCAACAGCTTTCTAGCCTCAACAAAGCCTaGAGCACCTACTGCTTGACTGTCTTCAACAAACCAATGCCACAT | + |
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Preference number: 5 (lower is better) Translates to: PSPNKDQQLSSLNKA*STYCLTVFNKPMPH Trigger: ATGTGGCATTGGTTTGTTGAAGACAGTCAAGCAGTAGGTGCTGCAGGCTTTGTTGAGGCTAGAAAGCTGTTGGTCTTTATTAGGTGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS GCA 90 bp | CTTTACTCTTTCAAAGCTCAAATACAGGACCTAGTCAAACTAGACTaGAGGCCACAGACAGAGTACTTCCTTAGTACGGCTGTGTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: LYSFKAQIQDLVKLD*RPQTEYFLSTAVFP Trigger: AGGAAACACAGCCGTACTAAGGAAGTACTCTGTCTGTGGCCTGCAGTCTAGTTTGACTAGGTCCTGTATTTGAGCTTTGAAAGAGTAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS CCA 90 bp | AACATTAACCTTCCCAGTCCCAGGTATGATGCTTTGTGTTACTTGTaGTATCTATCTCTCTCTCTCTCTGTCAATCACACACACACACAC | + |
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Preference number: 5 (lower is better) Translates to: NINLPSPRYDALCYL*YLSLSLSVNHTHTH Trigger: GTGTGTGTGTGTGTGATTGACAGAGAGAGAGAGAGATAGATACCACAAGTAACACAAAGCATCATACCTGGGACTGGGAAGGTTAATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS GCA 90 bp | AAAGACCAACAGCTTTCTAGCCTCAACAAAGCCTGCAGCACCTACTaGTTGACTGTCTTCAACAAACCAATGCCACATTTAAAATGTTTA | + |
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Preference number: 5 (lower is better) Translates to: KDQQLSSLNKACSTY*LTVFNKPMPHLKCL Trigger: TAAACATTTTAAATGTGGCATTGGTTTGTTGAAGACAGTCAAGCAGTAGGTGCTGCAGGCTTTGTTGAGGCTAGAAAGCTGTTGGTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS TCA 90 bp | TGTAGCTTCTATCAATTTCTGTGGTATAAACACTCCAACAGTGGCTaGTTTCAAGCTACTGGTTTGACACAACTGAAACATGAAGTAGTG | + |
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Preference number: 5 (lower is better) Translates to: CSFYQFLWYKHSNSG*FQATGLTQLKHEVV Trigger: CACTACTTCATGTTTCAGTTGTGTCAAACCAGTAGCTTGAAATCAGCCACTGTTGGAGTGTTTATACCACAGAAATTGATAGAAGCTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657250.1 ENST00000657955.1 ENST00000666950.1 ENST00000670111.1 |
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| CDS GCA 90 bp | TTGCAATGTAACGGCCGCAGACACAACACGCTTTTAAATTTAATCTaGATTAATGTTTTCTCTACCACTTTCTTAAGCCAGACAATTAAC | + |
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Preference number: 5 (lower is better) Translates to: LQCNGRRHNTLLNLI*INVFSTTFLSQTIN Trigger: GTTAATTGTCTGGCTTAAGAAAGTGGTAGAGAAAACATTAATGCAGATTAAATTTAAAAGCGTGTTGTGTCTGCGGCCGTTACATTGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657250.1 ENST00000657955.1 ENST00000670111.1 |
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| CDS TCA 90 bp | CTTAAATTTCGTAAGTTGAAAATGCACTTAATACACCTACCCTACTaGACATTAGAGCTTAGTCTAACCTACCTTCAACATGTTCAGAAC | + |
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Preference number: 5 (lower is better) Translates to: LKFRKLKMHLIHLPY*TLELSLTYLQHVQN Trigger: GTTCTGAACATGTTGAAGGTAGGTTAGACTAAGCTCTAATGTTCAGTAGGGTAGGTGTATTAAGTGCATTTTCAACTTACGAAATTTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653507.1 ENST00000657129.1 ENST00000665272.1 ENST00000666552.1 ENST00000670111.1 |
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| CDS CCA 90 bp | GATAATTGTGCAATTTTCTTAGATGGACTCCTTCTTAAGTTCACCTaGCTCTCTACTGGGGACCAAATCTTATATTTCTCAATTATGTAT | + |
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Preference number: 5 (lower is better) Translates to: DNCAIFLDGLLLKFT*LSTGDQILYFSIMY Trigger: ATACATAATTGAGAAATATAAGATTTGGTCCCCAGTAGAGAGCCAGGTGAACTTAAGAAGGAGTCCATCTAAGAAAATTGCACAATTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000582363.1 ENST00000653507.1 ENST00000654021.1 ENST00000655685.1 ENST00000657129.1 ENST00000658607.1 ENST00000658946.1 ENST00000665272.1 ENST00000666552.1 ENST00000670111.1 ENST00000671289.1 ENST00000671312.1 |
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| CDS GCA 72 bp | AGCCAACGCGTCCATCCTGCGCCTCCCCGCAGGCCTTaGTCCCCGCTCGGTCCCTCCCGGCCGCGGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SQRVHPAPPRRP*SPLGPSRPRRC Trigger: GCAGCGCCGCGGCCGGGAGGGACCGAGCGGGGAGCAAGGCCTGCGGGGAGGCGCAGGATGGACGCGTTGGCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000580684.6 ENST00000581471.2 ENST00000582008.6 ENST00000654155.1 ENST00000657250.1 ENST00000662359.1 ENST00000665272.1 ENST00000669574.1 ENST00000670111.1 |
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| CDS CAA 90 bp | GGTGGCGGCGAGGGGCGGACTCCGCGGACAAGGCCAGGCCTAGCCTaGAGCTCCGTCGGGCAGGGCCGCCGGGATTGGTGTCCGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: GGGEGRTPRTRPGLA*SSVGQGRRDWCPAE Trigger: CTCTGCCGGACACCAATCCCGGCGGCCCTGCCCGACGGAGCTCAAGGCTAGGCCTGGCCTTGTCCGCGGAGTCCGCCCCTCGCCGCCACC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581471.2 ENST00000665272.1 |
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| CDS CCA 72 bp | CTAGCCTTGAGCTCCGTCGGGCAGGGCCGCCGGGATTaGTGTCCGGCAGAGCGTGAGCCCAGCGGGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LALSSVGQGRRD*CPAEREPSGLE Trigger: CTCCAGCCCGCTGGGCTCACGCTCTGCCGGACACCAATCCCGGCGGCCCTGCCCGACGGAGCTCAAGGCTAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000581471.2 ENST00000665272.1 |
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| CDS CAA 72 bp | GAGGGGCGGACTCCGCGGACAAGGCCAGGCCTAGCCTaGAGCTCCGTCGGGCAGGGCCGCCGGGATTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: EGRTPRTRPGLA*SSVGQGRRDWC Trigger: ACACCAATCCCGGCGGCCCTGCCCGACGGAGCTCAAGGCTAGGCCTGGCCTTGTCCGCGGAGTCCGCCCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581471.2 ENST00000665272.1 |
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| CDS CAA 90 bp | ACAGGCGGCGATCAAGCTTCCCAGCGAGGGTCAAAGTCCAGCAGCTaGGAACTAGTGAGCCGGGCTTGTAGGAGTGAAGCGGCTCGCGCG | + |
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Preference number: 6 (lower is better) Translates to: TGGDQASQRGSKSSS*ELVSRACRSEAARA Trigger: CGCGCGAGCCGCTTCACTCCTACAAGCCCGGCTCACTAGTTCCAAGCTGCTGGACTTTGACCCTCGCTGGGAAGCTTGATCGCCGCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 35 transcripts: ENST00000580082.2 ENST00000580684.6 ENST00000581471.2 ENST00000582008.6 ENST00000582363.1 ENST00000653507.1 ENST00000654021.1 ENST00000654155.1 ENST00000655685.1 ENST00000656810.1 ENST00000657129.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000658946.1 ENST00000660030.1 ENST00000660561.1 ENST00000661357.1 ENST00000662359.1 ENST00000662415.1 ENST00000662652.1 ENST00000662932.1 ENST00000663393.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666552.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000669574.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS CCA 72 bp | GGGATTGGTGTCCGGCAGAGCGTGAGCCCAGCGGGCTaGAGTCGGCGAGCGGGAGTGAAAGAAGAAAAGCTA | + |
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Preference number: 6 (lower is better) Translates to: GIGVRQSVSPAG*SRRAGVKEEKL Trigger: TAGCTTTTCTTCTTTCACTCCCGCTCGCCGACTCCAGCCCGCTGGGCTCACGCTCTGCCGGACACCAATCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581471.2 ENST00000665272.1 |
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| CDS CCA 72 bp | GCAGGCCCTTCCAAGTTTGACCCTGATTCTCAAAGGTaGCCAAAAGCCGTCTCTAGAAACGGCGGTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AGPSKFDPDSQR*PKAVSRNGGGS Trigger: GCTGCCACCGCCGTTTCTAGAGACGGCTTTTGGCCACCTTTGAGAATCAGGGTCAAACTTGGAAGGGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 35 transcripts: ENST00000580082.2 ENST00000580684.6 ENST00000581471.2 ENST00000582008.6 ENST00000582363.1 ENST00000653507.1 ENST00000654021.1 ENST00000654155.1 ENST00000655685.1 ENST00000656810.1 ENST00000657129.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000658946.1 ENST00000660030.1 ENST00000660561.1 ENST00000661357.1 ENST00000662359.1 ENST00000662415.1 ENST00000662652.1 ENST00000662932.1 ENST00000663393.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666552.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000669574.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
||
| CDS TCA 72 bp | GGAGGTGTCTCAGAAACAGAGGAAGCTTGCCAAAGCTaGAATCCAGAAGGTTCCGGGAAGCCGTCTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGVSETEEACQS*NPEGSGKPSLG Trigger: GCCCAGAGACGGCTTCCCGGAACCTTCTGGATTTCAGCTTTGGCAAGCTTCCTCTGTTTCTGAGACACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653507.1 ENST00000662652.1 |
||
| CDS TCA 72 bp | GTCAGGCACACTAACCCGGGAAGCCGTCTCTGGGCCTaGACTATCCAAATTAGTGTCCGAGGAAGTGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: VRHTNPGSRLWA*TIQISVRGSVT Trigger: TGTCACACTTCCTCGGACACTAATTTGGATAGTTCAGGCCCAGAGACGGCTTCCCGGGTTAGTGTGCCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 32 transcripts: ENST00000577439.2 ENST00000580684.6 ENST00000581471.2 ENST00000582008.6 ENST00000582363.1 ENST00000654021.1 ENST00000655685.1 ENST00000656810.1 ENST00000657129.1 ENST00000657250.1 ENST00000657955.1 ENST00000658226.1 ENST00000658607.1 ENST00000658946.1 ENST00000660030.1 ENST00000660561.1 ENST00000662359.1 ENST00000662415.1 ENST00000662932.1 ENST00000663393.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666552.1 ENST00000668495.1 ENST00000668807.1 ENST00000669192.1 ENST00000669574.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
||
| CDS TCA 72 bp | AGCCAGGGAAGGGGTAGAGTGGATTCTTCCAGCACATaGGTTCACATGACTGCTTCCCCTTCTCAACAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SQGRGRVDSSST*VHMTASPSQQG Trigger: CCCCTGTTGAGAAGGGGAAGCAGTCATGTGAACTCATGTGCTGGAAGAATCCACTCTACCCCTTCCCTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 22 transcripts: ENST00000577439.2 ENST00000582363.1 ENST00000653507.1 ENST00000654021.1 ENST00000655685.1 ENST00000656810.1 ENST00000657129.1 ENST00000657955.1 ENST00000658226.1 ENST00000658607.1 ENST00000658946.1 ENST00000662415.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666552.1 ENST00000668495.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 ENST00000671312.1 |
||
| CDS TCA 72 bp | TTTGGGGCAGTACCAGTCCATACCAGCTGCGATTTGTaGGTGGACCCTTACACCAACAGTGTGAGCATCGCC | + |
|
Preference number: 6 (lower is better) Translates to: FGAVPVHTSCDL*VDPYTNSVSIA Trigger: GGCGATGCTCACACTGTTGGTGTAAGGGTCCACTCACAAATCGCAGCTGGTATGGACTGGTACTGCCCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662359.1 |
||
| CDS GCA 72 bp | AGCCTTGTGTACTTTTTCCTGGTAGTGGCCAGGGCCTaGGTTCCTCAGACCAAAAGGCGCAAACTGGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: SLVYFFLVVARA*VPQTKRRKLAL Trigger: CAATGCCAGTTTGCGCCTTTTGGTCTGAGGAACGCAGGCCCTGGCCACTACCAGGAAAAAGTACACAAGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000577439.2 ENST00000582363.1 ENST00000662415.1 ENST00000664934.1 |
||
| CDS TCA 72 bp | CCATGTGCAAAGGATCCGGGAAGCCGTCTCTGGGCCTaGACTATCCAAATTAGTGTCCGAGGAAGTGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: PCAKDPGSRLWA*TIQISVRGSVT Trigger: TGTCACACTTCCTCGGACACTAATTTGGATAGTTCAGGCCCAGAGACGGCTTCCCGGATCCTTTGCACATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580082.2 ENST00000654155.1 ENST00000666950.1 |
||
| CDS GCA 72 bp | CTGAATTACACCTCCAGCTTTCCTGATTCTCCAGCTTaGAGATGGCAGATCGTGGGTCTTCTCAGCCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LNYTSSFPDSPA*RWQIVGLLSLR Trigger: ACGGAGGCTGAGAAGACCCACGATCTGCCATCTGCAAGCTGGAGAATCAGGAAAGCTGGAGGTGTAATTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662415.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
||
| CDS CCA 72 bp | ACAGAGTCTCGCTCCATCATCCAGGCTGGAATGCATTaGCACCAACTTGTTTCACTGCAACTTCTGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TESRSIIQAGMH*HQLVSLQLLPP Trigger: GGGAGGCAGAAGTTGCAGTGAAACAAGTTGGTGCCAATGCATTCCAGCCTGGATGATGGAGCGAGACTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 26 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000582363.1 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000661829.1 ENST00000662415.1 ENST00000662652.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000669192.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 ENST00000671312.1 |
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| CDS CAA 72 bp | GACAGAGTCTCGCTCCATCATCCAGGCTGGAATGCATaGGCACCAACTTGTTTCACTGCAACTTCTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DRVSLHHPGWNA*APTCFTATSAS Trigger: GGAGGCAGAAGTTGCAGTGAAACAAGTTGGTGCCAATGCATTCCAGCCTGGATGATGGAGCGAGACTCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 26 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000582363.1 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000661829.1 ENST00000662415.1 ENST00000662652.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000669192.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 ENST00000671312.1 |
||
| CDS CAA 90 bp | TCCGGGTGTTCGTGTTCCTGTGATAGGGCCTCCCTTATGTGTCCATaGGCCCCATTGTGGATATACTGCAGTTTAGCCAGAAAGACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SGCSCSCDRASLMCP*APLWIYCSLARKTW Trigger: CCAGGTCTTTCTGGCTAAACTGCAGTATATCCACAATGGGGCCAATGGACACATAAGGGAGGCCCTATCACAGGAACACGAACACCCGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 23 transcripts: ENST00000577439.2 ENST00000582363.1 ENST00000653507.1 ENST00000653571.1 ENST00000654021.1 ENST00000655685.1 ENST00000656810.1 ENST00000657129.1 ENST00000657955.1 ENST00000658226.1 ENST00000658607.1 ENST00000658946.1 ENST00000662415.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666552.1 ENST00000668495.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 ENST00000671312.1 |
||
| CDS CAA 90 bp | TCGTGTTCCTGTGATAGGGCCTCCCTTATGTGTCCATTGGCCCCATaGTGGATATACTGCAGTTTAGCCAGAAAGACCTGGATGTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SCSCDRASLMCPLAP*WIYCSLARKTWMWR Trigger: CCTCCACATCCAGGTCTTTCTGGCTAAACTGCAGTATATCCACAATGGGGCCAATGGACACATAAGGGAGGCCCTATCACAGGAACACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 23 transcripts: ENST00000577439.2 ENST00000582363.1 ENST00000653507.1 ENST00000653571.1 ENST00000654021.1 ENST00000655685.1 ENST00000656810.1 ENST00000657129.1 ENST00000657955.1 ENST00000658226.1 ENST00000658607.1 ENST00000658946.1 ENST00000662415.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666552.1 ENST00000668495.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 ENST00000671312.1 |
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| CDS TCA 72 bp | TTTGGGGCAGTACCAGTCCATACCAGCTGCGATTTGTaGGTGGACTTGATAAGAAACTCTGGGGATAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FGAVPVHTSCDL*VDLIRNSGDRA Trigger: GGCCCTATCCCCAGAGTTTCTTATCAAGTCCACTCACAAATCGCAGCTGGTATGGACTGGTACTGCCCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000580082.2 ENST00000669574.1 |
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| CDS TCA 72 bp | GAAATCCAGAAGGTTCCGGGAAGCCGTCTCTGGGCCTaGACTATCCAAATTAGTGTCCGAGGAAGTGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: EIQKVPGSRLWA*TIQISVRGSVT Trigger: TGTCACACTTCCTCGGACACTAATTTGGATAGTTCAGGCCCAGAGACGGCTTCCCGGAACCTTCTGGATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653507.1 ENST00000662652.1 |
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| CDS TCA 72 bp | CTGGGACCACTATCATCTGAAGGCTTGACTGGGGCTTaGGGATCTTCTTCCAAAATGATGTCCTCACGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGPLSSEGLTGA*GSSSKMMSSRG Trigger: GCCACGTGAGGACATCATTTTGGAAGAAGATCCTCAAGCCCCAGTCAAGCCTTCAGATGATAGTGGTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660561.1 |
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| CDS CAA 90 bp | TACATAAGCTCCCTAGGTGATGCTGAGAATCATTGTAGAGGATTGTaGATAGCAGGCCATGTGCAAAGGATCCGGGAAGCCGTCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: YISSLGDAENHCRGL*IAGHVQRIREAVSG Trigger: CCCAGAGACGGCTTCCCGGATCCTTTGCACATGGCCTGCTATCAACAATCCTCTACAATGATTCTCAGCATCACCTAGGGAGCTTATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580082.2 ENST00000654155.1 ENST00000666950.1 |
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| CDS TCA 72 bp | CCATTGGACTTGACTGAATTACACCTCCAGCTTTCCTaGTTCTCCAGCTTGCAGATGGCAGATCGTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLDLTELHLQLS*FSSLQMADRGS Trigger: AGACCCACGATCTGCCATCTGCAAGCTGGAGAATCAGGAAAGCTGGAGGTGTAATTCAGTCAAGTCCAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662415.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS TCA 72 bp | TTTTGGTCAGGATGTTGGCCTGGGACCACTATCATCTaGAGGCTTGACTGGGGCTTGAGGATCTTCTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: FWSGCWPGTTII*RLDWGLRIFFQ Trigger: TTGGAAGAAGATCCTCAAGCCCCAGTCAAGCCTTCAGATGATAGTGGTCCCAGGCCAACATCCTGACCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660561.1 |
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| CDS CCA 72 bp | CCAGGGCCTGCGTTCCTCAGACCAAAAGGCGCAAACTaGCATTGCTGTGATTTCAGAAGAGAAGTGAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: PGPAFLRPKGAN*HCCDFRREVKC Trigger: ACATTTCACTTCTCTTCTGAAATCACAGCAATGCCAGTTTGCGCCTTTTGGTCTGAGGAACGCAGGCCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 33 transcripts: ENST00000577439.2 ENST00000580684.6 ENST00000581471.2 ENST00000582008.6 ENST00000582363.1 ENST00000653571.1 ENST00000654021.1 ENST00000655685.1 ENST00000656810.1 ENST00000657129.1 ENST00000657250.1 ENST00000657955.1 ENST00000658226.1 ENST00000658607.1 ENST00000658946.1 ENST00000660030.1 ENST00000660561.1 ENST00000662359.1 ENST00000662415.1 ENST00000662932.1 ENST00000663393.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666552.1 ENST00000668495.1 ENST00000668807.1 ENST00000669192.1 ENST00000669574.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS CCA 72 bp | GATAGGGCCTCCCTTATGTGTCCATTGGCCCCATTGTaGATATACTGCAGTTTAGCCAGAAAGACCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: DRASLMCPLAPL*IYCSLARKTWM Trigger: CATCCAGGTCTTTCTGGCTAAACTGCAGTATATCCACAATGGGGCCAATGGACACATAAGGGAGGCCCTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 23 transcripts: ENST00000577439.2 ENST00000582363.1 ENST00000653507.1 ENST00000653571.1 ENST00000654021.1 ENST00000655685.1 ENST00000656810.1 ENST00000657129.1 ENST00000657955.1 ENST00000658226.1 ENST00000658607.1 ENST00000658946.1 ENST00000662415.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666552.1 ENST00000668495.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 ENST00000671312.1 |
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| CDS CAA 72 bp | TGTGATAGGGCCTCCCTTATGTGTCCATTGGCCCCATaGTGGATATACTGCAGTTTAGCCAGAAAGACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CDRASLMCPLAP*WIYCSLARKTW Trigger: CCAGGTCTTTCTGGCTAAACTGCAGTATATCCACAATGGGGCCAATGGACACATAAGGGAGGCCCTATCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 23 transcripts: ENST00000577439.2 ENST00000582363.1 ENST00000653507.1 ENST00000653571.1 ENST00000654021.1 ENST00000655685.1 ENST00000656810.1 ENST00000657129.1 ENST00000657955.1 ENST00000658226.1 ENST00000658607.1 ENST00000658946.1 ENST00000662415.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666552.1 ENST00000668495.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 ENST00000671312.1 |
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| CDS CAA 72 bp | TCGTGTTCCTGTGATAGGGCCTCCCTTATGTGTCCATaGGCCCCATTGTGGATATACTGCAGTTTAGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SCSCDRASLMCP*APLWIYCSLAR Trigger: TCTGGCTAAACTGCAGTATATCCACAATGGGGCCAATGGACACATAAGGGAGGCCCTATCACAGGAACACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 23 transcripts: ENST00000577439.2 ENST00000582363.1 ENST00000653507.1 ENST00000653571.1 ENST00000654021.1 ENST00000655685.1 ENST00000656810.1 ENST00000657129.1 ENST00000657955.1 ENST00000658226.1 ENST00000658607.1 ENST00000658946.1 ENST00000662415.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666552.1 ENST00000668495.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 ENST00000671312.1 |
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| CDS TCA 72 bp | GTAAATGAGGAAATTATGCAGGTCCAGAGGAAGACCTaGGTGGATGACTTGGCTCTTCCAGGTGAGCCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: VNEEIMQVQRKT*VDDLALPGEPD Trigger: ATCAGGCTCACCTGGAAGAGCCAAGTCATCCACTCAGGTCTTCCTCTGGACCTGCATAATTTCCTCATTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000582363.1 ENST00000654021.1 ENST00000658607.1 ENST00000668495.1 ENST00000670111.1 ENST00000670993.1 |
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| CDS CCA 72 bp | ATGAGGAAATTATGCAGGTCCAGAGGAAGACCTGAGTaGATGACTTGGCTCTTCCAGGTGAGCCTGATAAAC | + |
|
Preference number: 6 (lower is better) Translates to: MRKLCRSRGRPE*MTWLFQVSLIN Trigger: GTTTATCAGGCTCACCTGGAAGAGCCAAGTCATCCACTCAGGTCTTCCTCTGGACCTGCATAATTTCCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000582363.1 ENST00000654021.1 ENST00000658607.1 ENST00000668495.1 ENST00000670111.1 ENST00000670993.1 |
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| CDS CAA 90 bp | TACATAAGCTCCCTAGGTGATGCTGAGAATCATTGTAGAGGATTGTaGATAGCAGGCCATGTGCAAAGGATCCAGGTGATGGAGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: YISSLGDAENHCRGL*IAGHVQRIQVMEVS Trigger: AGACACCTCCATCACCTGGATCCTTTGCACATGGCCTGCTATCAACAATCCTCTACAATGATTCTCAGCATCACCTAGGGAGCTTATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580684.6 |
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| CDS GCA 72 bp | TCCCTTATGTGTCCATTGGCCCCATTGTGGATATACTaGAGTTTAGCCAGAAAGACCTGGATGTGGAGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SLMCPLAPLWIY*SLARKTWMWRL Trigger: TAACCTCCACATCCAGGTCTTTCTGGCTAAACTGCAGTATATCCACAATGGGGCCAATGGACACATAAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 23 transcripts: ENST00000577439.2 ENST00000582363.1 ENST00000653507.1 ENST00000653571.1 ENST00000654021.1 ENST00000655685.1 ENST00000656810.1 ENST00000657129.1 ENST00000657955.1 ENST00000658226.1 ENST00000658607.1 ENST00000658946.1 ENST00000662415.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666552.1 ENST00000668495.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 ENST00000671312.1 |
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| CDS CAA 90 bp | ACCACAGGTTCTGCCCGCCCTTTCACCTTAGGCTTGGAAAAGTGGTaGCATATTATTCTTTCTTGCTTGCTCTTATGCTGTAAACATGGC | + |
|
Preference number: 6 (lower is better) Translates to: TTGSARPFTLGLEKW*HIILSCLLLCCKHG Trigger: GCCATGTTTACAGCATAAGAGCAAGCAAGAAAGAATAATATGCAACCACTTTTCCAAGCCTAAGGTGAAAGGGCGGGCAGAACCTGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS CAA 90 bp | TACATAAGCTCCCTAGGTGATGCTGAGAATCATTGTAGAGGATTGTaGATAGCAGGCCATGTGCAAAGGATCTGGGGAAGGCAAAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: YISSLGDAENHCRGL*IAGHVQRIWGRQRI Trigger: AATCCTTTGCCTTCCCCAGATCCTTTGCACATGGCCTGCTATCAACAATCCTCTACAATGATTCTCAGCATCACCTAGGGAGCTTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000582363.1 ENST00000653507.1 ENST00000654021.1 ENST00000655685.1 ENST00000657129.1 ENST00000658607.1 ENST00000665272.1 ENST00000666552.1 ENST00000670111.1 ENST00000671289.1 ENST00000671312.1 |
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| CDS TCA 72 bp | ATCAGTACACTTGCTTCTCTGGCCATTGGACTTGACTaGATTACACCTCCAGCTTTCCTGATTCTCCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ISTLASLAIGLD*ITPPAFLILQL Trigger: AAGCTGGAGAATCAGGAAAGCTGGAGGTGTAATTCAGTCAAGTCCAATGGCCAGAGAAGCAAGTGTACTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662415.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS GCA 72 bp | TTCAAAGCTCAAATACAGGACCTAGTCAAACTAGACTaGAGGCCACAGACAGAGTACTTCCTTAGTACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FKAQIQDLVKLD*RPQTEYFLSTA Trigger: AGCCGTACTAAGGAAGTACTCTGTCTGTGGCCTGCAGTCTAGTTTGACTAGGTCCTGTATTTGAGCTTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS CCA 72 bp | TCTGCTTGTTCTGGGACATCTATTTTCTCCTGCTCTTaGATATCAGTACACTTGCTTCTCTGGCCATTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SACSGTSIFSCS*ISVHLLLWPLD Trigger: GTCCAATGGCCAGAGAAGCAAGTGTACTGATATCCAAGAGCAGGAGAAAATAGATGTCCCAGAACAAGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 21 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662415.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
||
| CDS CAA 90 bp | TACATAAGCTCCCTAGGTGATGCTGAGAATCATTGTAGAGGATTGTaGATAGCAGGCCATGTGCAAAGGATCATGCCTTCCTTAGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: YISSLGDAENHCRGL*IAGHVQRIMPSLGS Trigger: ACTTCCTAAGGAAGGCATGATCCTTTGCACATGGCCTGCTATCAACAATCCTCTACAATGATTCTCAGCATCACCTAGGGAGCTTATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653571.1 |
||
| CDS CAA 90 bp | TACATAAGCTCCCTAGGTGATGCTGAGAATCATTGTAGAGGATTGTaGATAGCAGGCCATGTGCAAAGGATCTGGATGTGGAGGTTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: YISSLGDAENHCRGL*IAGHVQRIWMWRLK Trigger: CTTTAACCTCCACATCCAGATCCTTTGCACATGGCCTGCTATCAACAATCCTCTACAATGATTCTCAGCATCACCTAGGGAGCTTATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662652.1 ENST00000668807.1 |
||
| CDS CAA 90 bp | TACATAAGCTCCCTAGGTGATGCTGAGAATCATTGTAGAGGATTGTaGATAGCAGGCCATGTGCAAAGGATTAGACGTGAACTCCACGAA | + |
|
Preference number: 6 (lower is better) Translates to: YISSLGDAENHCRGL*IAGHVQRIRRELHE Trigger: TTCGTGGAGTTCACGTCTAATCCTTTGCACATGGCCTGCTATCAACAATCCTCTACAATGATTCTCAGCATCACCTAGGGAGCTTATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661357.1 ENST00000669192.1 |
||
| CDS TCA 72 bp | GGAGGTGTCTCAGAAACAGAGGAAGCTTGCCAAAGCTaGAATCCAGAAGGTTCAGACATTAGAATCTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: GGVSETEEACQS*NPEGSDIRICI Trigger: AATGCAGATTCTAATGTCTGAACCTTCTGGATTTCAGCTTTGGCAAGCTTCCTCTGTTTCTGAGACACCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657129.1 ENST00000657955.1 ENST00000658226.1 ENST00000658946.1 |
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| CDS GCA 72 bp | AATAAAGACCAACAGCTTTCTAGCCTCAACAAAGCCTaGAGCACCTACTGCTTGACTGTCTTCAACAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: NKDQQLSSLNKA*STYCLTVFNKP Trigger: TGGTTTGTTGAAGACAGTCAAGCAGTAGGTGCTGCAGGCTTTGTTGAGGCTAGAAAGCTGTTGGTCTTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
||
| CDS CCA 72 bp | CTTCCCAGTCCCAGGTATGATGCTTTGTGTTACTTGTaGTATCTATCTCTCTCTCTCTCTGTCAATCACACA | + |
|
Preference number: 6 (lower is better) Translates to: LPSPRYDALCYL*YLSLSLSVNHT Trigger: TGTGTGATTGACAGAGAGAGAGAGAGATAGATACCACAAGTAACACAAAGCATCATACCTGGGACTGGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS CAA 72 bp | AGAGATGCAAATCCTCAGATCCCAATGCAGACTTACTaGATAAGAAACTCTGGGGATAGGGCCCAGGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: RDANPQIPMQTY*IRNSGDRAQEF Trigger: AAATTCCTGGGCCCTATCCCCAGAGTTTCTTATCAAGTAAGTCTGCATTGGGATCTGAGGATTTGCATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 24 transcripts: ENST00000577439.2 ENST00000580684.6 ENST00000653507.1 ENST00000653571.1 ENST00000655685.1 ENST00000656810.1 ENST00000657129.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000660561.1 ENST00000661357.1 ENST00000662359.1 ENST00000662652.1 ENST00000665272.1 ENST00000666552.1 ENST00000666950.1 ENST00000668807.1 ENST00000669192.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 ENST00000671312.1 |
||
| CDS CAA 72 bp | AACCTTCCCAGTCCCAGGTATGATGCTTTGTGTTACTaGTGGTATCTATCTCTCTCTCTCTCTGTCAATCAC | + |
|
Preference number: 6 (lower is better) Translates to: NLPSPRYDALCY*WYLSLSLSVNH Trigger: GTGATTGACAGAGAGAGAGAGAGATAGATACCACAAGTAACACAAAGCATCATACCTGGGACTGGGAAGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
||
| CDS CAA 72 bp | TCTGCCCGCCCTTTCACCTTAGGCTTGGAAAAGTGGTaGCATATTATTCTTTCTTGCTTGCTCTTATGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SARPFTLGLEKW*HIILSCLLLCC Trigger: ACAGCATAAGAGCAAGCAAGAAAGAATAATATGCAACCACTTTTCCAAGCCTAAGGTGAAAGGGCGGGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
||
| CDS CAA 90 bp | TTCACCTTAGGCTTGGAAAAGTGGTTGCATATTATTCTTTCTTGCTaGCTCTTATGCTGTAAACATGGCAACATTTCTGGGCTGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FTLGLEKWLHIILSC*LLCCKHGNISGLAS Trigger: GCTGGCCAGCCCAGAAATGTTGCCATGTTTACAGCATAAGAGCAAGCAAGAAAGAATAATATGCAACCACTTTTCCAAGCCTAAGGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
||
| CDS TCA 72 bp | TTTTTCTCCTTAGAGGGTTTCAAGAAACCCCTTGATTaGGAGGAGGGCACATATCCTCCTCTTACCTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FFSLEGFKKPLD*EEGTYPPLTFF Trigger: AAAGAAGGTAAGAGGAGGATATGTGCCCTCCTCTCAATCAAGGGGTTTCTTGAAACCCTCTAAGGAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000581471.2 ENST00000654021.1 ENST00000658607.1 ENST00000661829.1 ENST00000668495.1 ENST00000670111.1 ENST00000670993.1 |
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| CDS GCA 72 bp | TTCTTGCAGTGTATATCCCAGGTAAATACCTTTCTCTaGTATTGGAGTCCCCTTTCCTCCCCTTATTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: FLQCISQVNTFL*YWSPLSSPYSC Trigger: ACAAGAATAAGGGGAGGAAAGGGGACTCCAATAGCAGAGAAAGGTATTTACCTGGGATATACACTGCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 21 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662415.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS CAA 72 bp | GCAGTGTATATCCCAGGTAAATACCTTTCTCTGCTATaGGAGTCCCCTTTCCTCCCCTTATTCTTGTTAACT | + |
|
Preference number: 6 (lower is better) Translates to: AVYIPGKYLSLL*ESPFLPLFLLT Trigger: AGTTAACAAGAATAAGGGGAGGAAAGGGGACTCCAATAGCAGAGAAAGGTATTTACCTGGGATATACACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 21 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662415.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS CAA 90 bp | TCCTTGCAGTCACTGCTGGTAACTACTTCAGGGGTATACGAGCACTaGTATTCTTTACTCTTTCAAAGCTCAAATACAGGACCTAGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: SLQSLLVTTSGVYEH*YSLLFQSSNTGPSQ Trigger: TTGACTAGGTCCTGTATTTGAGCTTTGAAAGAGTAAAGAATACAAGTGCTCGTATACCCCTGAAGTAGTTACCAGCAGTGACTGCAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS TCA 72 bp | GGAGGTGTCTCAGAAACAGAGGAAGCTTGCCAAAGCTaGAATCCAGAAGGTTCTGTTTTCAGAAGTATAAAA | + |
|
Preference number: 6 (lower is better) Translates to: GGVSETEEACQS*NPEGSVFRSIK Trigger: TTTTATACTTCTGAAAACAGAACCTTCTGGATTTCAGCTTTGGCAAGCTTCCTCTGTTTCTGAGACACCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577439.2 ENST00000662415.1 ENST00000664934.1 ENST00000666552.1 |
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| CDS TCA 72 bp | ACAACAGCTGTGTTAACAATCAGCTTGCCAAATTTCTaGAAATTAAACGGTAGACCCATGGGCTGGTATGAG | + |
|
Preference number: 6 (lower is better) Translates to: TTAVLTISLPNF*KLNGRPMGWYE Trigger: CTCATACCAGCCCATGGGTCTACCGTTTAATTTTCAGAAATTTGGCAAGCTGATTGTTAACACAGCTGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS CCA 72 bp | TCATGTCATGCACTTTCTATAGTACTCAAGAGAACTTaGCAGCACCATTTGTCACACAGAGTTCACCCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: SCHALSIVLKRT*QHHLSHRVHPK Trigger: TTTAGGGTGAACTCTGTGTGACAAATGGTGCTGCCAAGTTCTCTTGAGTACTATAGAAAGTGCATGACATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000653507.1 ENST00000657129.1 ENST00000665272.1 ENST00000666552.1 ENST00000670111.1 |
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| CDS CAA 72 bp | ACATCTATTTTCTCCTGCTCTTGGATATCAGTACACTaGCTTCTCTGGCCATTGGACTTGACTGAATTACAC | + |
|
Preference number: 6 (lower is better) Translates to: TSIFSCSWISVH*LLWPLDLTELH Trigger: GTGTAATTCAGTCAAGTCCAATGGCCAGAGAAGCAAGTGTACTGATATCCAAGAGCAGGAGAAAATAGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 21 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662415.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS CAA 72 bp | TACAGAGTTATAGTTTCATCCCATAAGATTACCTCCTaGCAGTCACTGCTGGTAACTACTTCAGGGGTATAC | + |
|
Preference number: 6 (lower is better) Translates to: YRVIVSSHKITS*QSLLVTTSGVY Trigger: GTATACCCCTGAAGTAGTTACCAGCAGTGACTGCAAGGAGGTAATCTTATGGGATGAAACTATAACTCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS CAA 90 bp | TTAAACATTAACCTTCCCAGTCCCAGGTATGATGCTTTGTGTTACTaGTGGTATCTATCTCTCTCTCTCTCTGTCAATCACACACACACA | + |
|
Preference number: 6 (lower is better) Translates to: LNINLPSPRYDALCY*WYLSLSLSVNHTHT Trigger: TGTGTGTGTGTGATTGACAGAGAGAGAGAGAGATAGATACCACAAGTAACACAAAGCATCATACCTGGGACTGGGAAGGTTAATGTTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS TCA 72 bp | CAATATTCCCTCCTAGGGACAGGAATTTTATCACTCTaGTGCCTTATGGCTACTATTCATGGACGTTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: QYSLLGTGILSL*CLMATIHGRFL Trigger: TAAGAAACGTCCATGAATAGTAGCCATAAGGCATCAGAGTGATAAAATTCCTGTCCCTAGGAGGGAATATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 21 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662415.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS TCA 72 bp | AGATACCTGGTAAAACATTATTTCCACGTGTGTTGGTaGGGGTGTTTCTGGAAGTCATTGACATTTCTACTG | + |
|
Preference number: 6 (lower is better) Translates to: RYLVKHYFHVCW*GCFWKSLTFLL Trigger: CAGTAGAAATGTCAATGACTTCCAGAAACACCCTCACCAACACACGTGGAAATAATGTTTTACCAGGTATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 21 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662415.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS TCA 72 bp | AAAAGCCCACACATAAAAGAAACCCAATCTAGTAAATaGGGAAATTATGCAGGTCCAGAGGAAGACCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: KSPHIKETQSSK*GNYAGPEEDLS Trigger: ACTCAGGTCTTCCTCTGGACCTGCATAATTTCCTCATTTACTAGATTGGGTTTCTTTTATGTGTGGGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000582363.1 ENST00000654021.1 ENST00000658607.1 ENST00000668495.1 ENST00000670111.1 ENST00000670993.1 |
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| CDS CCA 72 bp | GCAATTTTCTTAGATGGACTCCTTCTTAAGTTCACCTaGCTCTCTACTGGGGACCAAATCTTATATTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: AIFLDGLLLKFT*LSTGDQILYFS Trigger: TGAGAAATATAAGATTTGGTCCCCAGTAGAGAGCCAGGTGAACTTAAGAAGGAGTCCATCTAAGAAAATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000582363.1 ENST00000653507.1 ENST00000654021.1 ENST00000655685.1 ENST00000657129.1 ENST00000658607.1 ENST00000658946.1 ENST00000665272.1 ENST00000666552.1 ENST00000670111.1 ENST00000671289.1 ENST00000671312.1 |
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| CDS CAA 72 bp | TTAAACATTAACCTTCCCAGTCCCAGGTATGATGCTTaGTGTTACTTGTGGTATCTATCTCTCTCTCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LNINLPSPRYDA*CYLWYLSLSLS Trigger: AGAGAGAGAGAGAGATAGATACCACAAGTAACACAAAGCATCATACCTGGGACTGGGAAGGTTAATGTTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS CAA 72 bp | GGCTTGGAAAAGTGGTTGCATATTATTCTTTCTTGCTaGCTCTTATGCTGTAAACATGGCAACATTTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLEKWLHIILSC*LLCCKHGNISG Trigger: CCCAGAAATGTTGCCATGTTTACAGCATAAGAGCAAGCAAGAAAGAATAATATGCAACCACTTTTCCAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS CAA 90 bp | ACTCTGATGCCTTATGGCTACTATTCATGGACGTTTCTTATAGCTTaGATTTTCTTGCAGTGTATATCCCAGGTAAATACCTTTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TLMPYGYYSWTFLIA*IFLQCISQVNTFLC Trigger: GCAGAGAAAGGTATTTACCTGGGATATACACTGCAAGAAAATCAAAGCTATAAGAAACGTCCATGAATAGTAGCCATAAGGCATCAGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 21 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662415.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS TCA 72 bp | TACATTCTCATCATTTGCCTCCCAAGACACAGCACATaGAAATGTGATCCATTGTTTTGCCATCACCTAATA | + |
|
Preference number: 6 (lower is better) Translates to: YILIICLPRHST*KCDPLFCHHLI Trigger: TATTAGGTGATGGCAAAACAATGGATCACATTTTCATGTGCTGTGTCTTGGGAGGCAAATGATGAGAATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662932.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
||
| CDS CAA 72 bp | TTGCACCAGGCAGAATTAAATAGTTTTATTTCTAATTaGTACTCACCCTTACACCAACAGTGTGAGCATCGC | + |
|
Preference number: 6 (lower is better) Translates to: LHQAELNSFISN*YSPLHQQCEHR Trigger: GCGATGCTCACACTGTTGGTGTAAGGGTGAGTACAAATTAGAAATAAAACTATTTAATTCTGCCTGGTGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000653507.1 ENST00000655685.1 ENST00000657129.1 ENST00000665272.1 ENST00000666552.1 ENST00000670111.1 |
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| CDS CAA 90 bp | CCTTATGGCTACTATTCATGGACGTTTCTTATAGCTTTGATTTTCTaGCAGTGTATATCCCAGGTAAATACCTTTCTCTGCTATTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PYGYYSWTFLIALIF*QCISQVNTFLCYWS Trigger: ACTCCAATAGCAGAGAAAGGTATTTACCTGGGATATACACTGCAAGAAAATCAAAGCTATAAGAAACGTCCATGAATAGTAGCCATAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 21 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662415.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS TCA 72 bp | ATAGGGGTACTATTTTTCTCAATGATTAAATTTCAGTaGGATAGCTCCCAGGTCCTTGAGGAATTCACATTC | + |
|
Preference number: 6 (lower is better) Translates to: IGVLFFSMIKFQ*DSSQVLEEFTF Trigger: GAATGTGAATTCCTCAAGGACCTGGGAGCTATCTCACTGAAATTTAATCATTGAGAAAAATAGTACCCCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000653507.1 ENST00000657129.1 ENST00000665272.1 ENST00000666552.1 ENST00000670111.1 |
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| CDS CCA 72 bp | ATACTATTCCTTTTAGTCCAAGAGAATAATGCCAACTaGATACAGCTCAAAGACTGCACCATTCCCATTATT | + |
|
Preference number: 6 (lower is better) Translates to: ILFLLVQENNAN*IQLKDCTIPII Trigger: AATAATGGGAATGGTGCAGTCTTTGAGCTGTATCCAGTTGGCATTATTCTCTTGGACTAAAAGGAATAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000581471.2 ENST00000654021.1 ENST00000658607.1 ENST00000661829.1 ENST00000668495.1 ENST00000670111.1 ENST00000670993.1 |
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| CDS CCA 72 bp | AATTACCTGAGAAAACTGCAGCCCAAAAATCTAAAGTaGCTTACCCAAAGTGAGGAAGTTAATACTATTCCT | + |
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Preference number: 6 (lower is better) Translates to: NYLRKLQPKNLK*LTQSEEVNTIP Trigger: AGGAATAGTATTAACTTCCTCACTTTGGGTAAGCCACTTTAGATTTTTGGGCTGCAGTTTTCTCAGGTAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000581471.2 ENST00000654021.1 ENST00000658607.1 ENST00000661829.1 ENST00000668495.1 ENST00000670111.1 ENST00000670993.1 |
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| CDS CAA 72 bp | CCTTATGGCTACTATTCATGGACGTTTCTTATAGCTTaGATTTTCTTGCAGTGTATATCCCAGGTAAATACC | + |
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Preference number: 6 (lower is better) Translates to: PYGYYSWTFLIA*IFLQCISQVNT Trigger: GGTATTTACCTGGGATATACACTGCAAGAAAATCAAAGCTATAAGAAACGTCCATGAATAGTAGCCATAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 21 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662415.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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| CDS CCA 72 bp | AATTTTATCACTCTGATGCCTTATGGCTACTATTCATaGACGTTTCTTATAGCTTTGATTTTCTTGCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: NFITLMPYGYYS*TFLIALIFLQC Trigger: ACACTGCAAGAAAATCAAAGCTATAAGAAACGTCCATGAATAGTAGCCATAAGGCATCAGAGTGATAAAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 21 transcripts: ENST00000577439.2 ENST00000582008.6 ENST00000654021.1 ENST00000654155.1 ENST00000656810.1 ENST00000657250.1 ENST00000657955.1 ENST00000658607.1 ENST00000660030.1 ENST00000662415.1 ENST00000662932.1 ENST00000664934.1 ENST00000665272.1 ENST00000665442.1 ENST00000665541.1 ENST00000666950.1 ENST00000668495.1 ENST00000668807.1 ENST00000670111.1 ENST00000670993.1 ENST00000671289.1 |
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