Pregenerated sensors for LINC00665 (Homo sapiens)
Ensembl gene IDs: ENSG00000232677Ensembl transcript IDs: ENST00000438368.7, ENST00000590622.5, ENST00000590657.2, ENST00000591372.2, ENST00000651681.2, ENST00000656137.1, ENST00000658042.1, ENST00000658301.1, ENST00000658991.1, ENST00000661195.1, ENST00000662398.1, ENST00000665982.1, ENST00000666458.1, ENST00000667789.1, ENST00000667829.1, ENST00000668768.1, ENST00000675074.1, ENST00000675167.1, ENST00000675324.1, ENST00000675914.1, ENST00000676298.1, ENST00000676422.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGTCTGCCAGAAACCAGGACTCAGTCCCCCAGCATCCTGGGATGTaGACTGACTCAAGGGATGGCCCCTGTCAGGGCCACTTCCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: QSARNQDSVPQHPGM*TDSRDGPCQGHFPP Trigger: GGGAGGGAAGTGGCCCTGACAGGGGCCATCCCTTGAGTCAGTCCACATCCCAGGATGCTGGGGGACTGAGTCCTGGTTTCTGGCAGACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661195.1 |
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| CDS TCA 90 bp | TGCCAGAAACCAGGACTCAGTCCCCCAGCATCCTGGGATGTGGACTaGCTCAAGGGATGGCCCCTGTCAGGGCCACTTCCCTCCCAGACA | + |
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Preference number: 5 (lower is better) Translates to: CQKPGLSPPASWDVD*LKGWPLSGPLPSQT Trigger: TGTCTGGGAGGGAAGTGGCCCTGACAGGGGCCATCCCTTGAGTCAGTCCACATCCCAGGATGCTGGGGGACTGAGTCCTGGTTTCTGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661195.1 |
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| CDS CCA 90 bp | CGGGAGCCTGTACTTCCAGCTACTCCAGGGGCTGAGGTGGGAAAATaGCGTGAATCTGGGAGGCAGATTCTTGCAGGGAGCCGAGATCGC | + |
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Preference number: 5 (lower is better) Translates to: REPVLPATPGAEVGK*RESGRQILAGSRDR Trigger: GCGATCTCGGCTCCCTGCAAGAATCTGCCTCCCAGATTCACGCCATTTTCCCACCTCAGCCCCTGGAGTAGCTGGAAGTACAGGCTCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000438368.7 ENST00000590622.5 ENST00000590657.2 ENST00000676298.1 |
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| CDS CCA 90 bp | GGCCATCTGGGTGTATACGTGCAAGTCACAGGAGATGCGATGGCTTaGCTTGGGCTCAGAGGCTGGACATTCCTGCCCTCCACTGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: GHLGVYVQVTGDAMA*LGLRGWTFLPSTVR Trigger: TCTCACAGTGGAGGGCAGGAATGTCCAGCCTCTGAGCCCAAGCCAAGCCATCGCATCTCCTGTGACTTGCACGTATACACCCAGATGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000676422.1 |
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| CDS TCA 90 bp | TTGGGCCAGAGTTCCAGGGGCTCTGGGAGTGGCTGCCAGGTGAGTTaGACAGTCCGATTTCCAGTGGGTTCCGGAAGTGAAATTGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: LGQSSRGSGSGCQVS*TVRFPVGSGSEIGE Trigger: CTCACCAATTTCACTTCCGGAACCCACTGGAAATCGGACTGTTCAACTCACCTGGCAGCCACTCCCAGAGCCCCTGGAACTCTGGCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000675324.1 ENST00000676422.1 |
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| CDS TCA 90 bp | GAGCTTTGGGCCAGAGTTCCAGGGGCTCTGGGAGTGGCTGCCAGGTaGGTTGAACAGTCCGATTTCCAGTGGGTTCCGGAAGTGAAATTG | + |
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Preference number: 5 (lower is better) Translates to: ELWARVPGALGVAAR*VEQSDFQWVPEVKL Trigger: CAATTTCACTTCCGGAACCCACTGGAAATCGGACTGTTCAACTCACCTGGCAGCCACTCCCAGAGCCCCTGGAACTCTGGCCCAAAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000675324.1 ENST00000676422.1 |
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| CDS TCA 90 bp | GTATGCGGGATTGTCAGGCAGATCTGGCCCATCGGAGAGCCTGAGTaGGGGCGATCAATTCAGCCTTTTGTGCTGAGGTGTTTGCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: VCGIVRQIWPIGEPE*GRSIQPFVLRCLLV Trigger: TACCAGCAAACACCTCAGCACAAAAGGCTGAATTGATCGCCCTCACTCAGGCTCTCCGATGGGCCAGATCTGCCTGACAATCCCGCATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658301.1 |
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| CDS TCA 90 bp | TTGAGTATGCGGGATTGTCAGGCAGATCTGGCCCATCGGAGAGCCTaGGTGAGGGCGATCAATTCAGCCTTTTGTGCTGAGGTGTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: LSMRDCQADLAHRRA*VRAINSAFCAEVFA Trigger: AGCAAACACCTCAGCACAAAAGGCTGAATTGATCGCCCTCACTCAGGCTCTCCGATGGGCCAGATCTGCCTGACAATCCCGCATACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658301.1 |
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| CDS TCA 90 bp | TTCCTTTTGATGTCCTTTACAGTGGATTACAGCCACCTGCTGAGGTaGGTAGCCCACGCTCCTGGTAGATGGCTCCACGTACATGCACAG | + |
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Preference number: 5 (lower is better) Translates to: FLLMSFTVDYSHLLR*VAHAPGRWLHVHAQ Trigger: CTGTGCATGTACGTGGAGCCATCTACCAGGAGCGTGGGCTACTCACCTCAGCAGGTGGCTGTAATCCACTGTAAAGGACATCAAAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000591372.2 ENST00000656137.1 ENST00000658991.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 ENST00000668768.1 |
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| CDS GCA 90 bp | TCTTTTGTGGATCTTCAGTTACTTCAGGCCATCTGGGTGTATACGTaGAAGTCACAGGAGATGCGATGGCTTGGCTTGGGCTCAGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: SFVDLQLLQAIWVYT*KSQEMRWLGLGSEA Trigger: AGCCTCTGAGCCCAAGCCAAGCCATCGCATCTCCTGTGACTTGCACGTATACACCCAGATGGCCTGAAGTAACTGAAGATCCACAAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676422.1 |
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| CDS CCA 90 bp | GTCACCAAGGAGGGAGTAGGGGTATCTTATACTTGTGGGTTAAGGTaGGGGGATACAAGAGGAGGATGCAAAGGAGGCTTTGGATTGGGA | + |
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Preference number: 5 (lower is better) Translates to: VTKEGVGVSYTCGLR*GDTRGGCKGGFGLG Trigger: TCCCAATCCAAAGCCTCCTTTGCATCCTCCTCTTGTATCCCCCCACCTTAACCCACAAGTATAAGATACCCCTACTCCCTCCTTGGTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000675324.1 |
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| CDS TCA 90 bp | GATCTGGCTGTGGAAAGGAGACTGTGGGCAGCAAGTTTAGAGGCGTaGCTGAAAGTCACACTGCATCTTGAGCTGCTGAATCAGCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: DLAVERRLWAASLEA*LKVTLHLELLNQLS Trigger: AGAAAGCTGATTCAGCAGCTCAAGATGCAGTGTGACTTTCAGTCACGCCTCTAAACTTGCTGCCCACAGTCTCCTTTCCACAGCCAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000591372.2 ENST00000656137.1 ENST00000658991.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 ENST00000668768.1 |
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| CDS TCA 90 bp | CTGCTGTCAGTGTTAACGTTAATATCCTTACCCCATCGGAGAGCCTaGGTGAGGGCGATCAATTCAGCCTTTTGTGCTGAGGTGTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: LLSVLTLISLPHRRA*VRAINSAFCAEVFA Trigger: AGCAAACACCTCAGCACAAAAGGCTGAATTGATCGCCCTCACTCAGGCTCTCCGATGGGGTAAGGATATTAACGTTAACACTGACAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000591372.2 ENST00000656137.1 ENST00000658991.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 ENST00000668768.1 ENST00000675074.1 |
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| CDS TCA 90 bp | TTCTCTCTGGAACTTTTTAACAAACAACAGGTCACCTGGCGGGAATaGATGGCAGGGCCCTGTCTGTTCAGGAATTGGATTGGGATGGGT | + |
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Preference number: 5 (lower is better) Translates to: FSLELFNKQQVTWRE*MAGPCLFRNWIGMG Trigger: ACCCATCCCAATCCAATTCCTGAACAGACAGGGCCCTGCCATTCATTCCCGCCAGGTGACCTGTTGTTTGTTAAAAAGTTCCAGAGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000591372.2 ENST00000658301.1 ENST00000662398.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 |
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| CDS CCA 90 bp | TCCAGGAGGATCCAGGGGCCTGGGGACTTGTTAAATACAGATTGTTaGGTCTCACTCCTAGAGTTTCTTCTTCAGTATTCTAGGGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: SRRIQGPGDLLNTDC*VSLLEFLLQYSREQ Trigger: CTGCTCCCTAGAATACTGAAGAAGAAACTCTAGGAGTGAGACCCAACAATCTGTATTTAACAAGTCCCCAGGCCCCTGGATCCTCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658042.1 ENST00000665982.1 ENST00000675167.1 |
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| CDS GCA 90 bp | GGATGCAAAGGAGGCTTTGGATTGGGAAGAAGGGCGGCAATGAGATaGAGCTGTAGTCCAGGAATAGTCAGGGAAGCAGATAATTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: GCKGGFGLGRRAAMR*SCSPGIVREADNFV Trigger: AACAAAATTATCTGCTTCCCTGACTATTCCTGGACTACAGCTGCATCTCATTGCCGCCCTTCTTCCCAATCCAAAGCCTCCTTTGCATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675324.1 |
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| CDS CCA 90 bp | GCTATTTTGACTTCTTTTGTGGATCTTCAGTTACTTCAGGCCATCTaGGTGTATACGTGCAAGTCACAGGAGATGCGATGGCTTGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: AILTSFVDLQLLQAI*VYTCKSQEMRWLGL Trigger: CAAGCCAAGCCATCGCATCTCCTGTGACTTGCACGTATACACCCAGATGGCCTGAAGTAACTGAAGATCCACAAAAGAAGTCAAAATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000676422.1 |
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| CDS TCA 90 bp | AGGAAGAATCCACCAACCTTCCTGATTTTTATTGGCTCTGAGTTCTaGGGCCAGTTTTCTTCTTCTGTTGAGTATGCGGGATTGTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: RKNPPTFLIFIGSEF*GQFSSSVEYAGLSG Trigger: GCCTGACAATCCCGCATACTCAACAGAAGAAGAAAACTGGCCTCAGAACTCAGAGCCAATAAAAATCAGGAAGGTTGGTGGATTCTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000591372.2 ENST00000656137.1 ENST00000658991.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 ENST00000668768.1 |
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| CDS GCA 90 bp | CTGGGAACTGCGGATATAGCTTGCCACAGTATCTTATCAGTTAATTaGATTCTTGGATGTGCTGGGAGTCAGCTTGCACAAGTTAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: LGTADIACHSILSVN*ILGCAGSQLAQVKS Trigger: GGACTTAACTTGTGCAAGCTGACTCCCAGCACATCCAAGAATGCAATTAACTGATAAGATACTGTGGCAAGCTATATCCGCAGTTCCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000591372.2 ENST00000651681.2 ENST00000656137.1 ENST00000658301.1 ENST00000658991.1 ENST00000662398.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 ENST00000668768.1 |
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| CDS TCA 90 bp | CTGTCAATACCTACAACAGTTATGGAGGCAAGGGAAACAGGCCTTTaGAAAGAAAGTAATGTGGAGTGGGTAGCCTCCGTATTGATTAAG | + |
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Preference number: 5 (lower is better) Translates to: LSIPTTVMEARETGL*KESNVEWVASVLIK Trigger: CTTAATCAATACGGAGGCTACCCACTCCACATTACTTTCTTTTCAAAGGCCTGTTTCCCTTGCCTCCATAACTGTTGTAGGTATTGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675324.1 |
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| CDS TCA 90 bp | CAGGAACAAATCACAATGATGGAATGTAATCACTTAAAGCTATTTTaGCTTCTTTTGTGGATCTTCAGTTACTTCAGGCCATCTGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: QEQITMMECNHLKLF*LLLWIFSYFRPSGC Trigger: ACACCCAGATGGCCTGAAGTAACTGAAGATCCACAAAAGAAGTCAAAATAGCTTTAAGTGATTACATTCCATCATTGTGATTTGTTCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000676422.1 |
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| CDS TCA 72 bp | CCAGGACTCAGTCCCCCAGCATCCTGGGATGTGGACTaGCTCAAGGGATGGCCCCTGTCAGGGCCACTTCCC | + |
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Preference number: 6 (lower is better) Translates to: PGLSPPASWDVD*LKGWPLSGPLP Trigger: GGGAAGTGGCCCTGACAGGGGCCATCCCTTGAGTCAGTCCACATCCCAGGATGCTGGGGGACTGAGTCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661195.1 |
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| CDS CCA 72 bp | TCGCCCGGTGACGTTTCTCCCGGTGACGTTTCTCGCTaGGGCCTCCAAATGTCGTACCTTGCGCCAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SPGDVSPGDVSR*GLQMSYLAPGF Trigger: GAAGCCTGGCGCAAGGTACGACATTTGGAGGCCCCAGCGAGAAACGTCACCGGGAGAAACGTCACCGGGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667789.1 ENST00000675914.1 |
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| CDS CCA 72 bp | AGAAACCAGGACTCAGTCCCCCAGCATCCTGGGATGTaGACTGACTCAAGGGATGGCCCCTGTCAGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: RNQDSVPQHPGM*TDSRDGPCQGH Trigger: GTGGCCCTGACAGGGGCCATCCCTTGAGTCAGTCCACATCCCAGGATGCTGGGGGACTGAGTCCTGGTTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661195.1 |
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| CDS TCA 72 bp | CTCTTCCAAGCAGGAGGGAGTCCTTCTCTCTGGAACTaGCCCCGGGGTCAGCAGTTGAGGACTCAGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LFQAGGSPSLWN*PRGQQLRTQRW Trigger: CCACCTCTGAGTCCTCAACTGCTGACCCCGGGGTCAGTTCCAGAGAGAAGGACTCCCTCCTGCTTGGAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651681.2 |
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| CDS TCA 72 bp | CTCTCTCACGGAGCAAAGAGCAGGAGGATGGGGGATTaGTCTCCTAAGGGAGGTCCCCCGATCCGAGTCACG | + |
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Preference number: 6 (lower is better) Translates to: LSHGAKSRRMGD*SPKGGPPIRVT Trigger: CGTGACTCGGATCGGGGGACCTCCCTTAGGAGATCAATCCCCCATCCTCCTGCTCTTTGCTCCGTGAGAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000675324.1 ENST00000676422.1 |
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| CDS CAA 90 bp | AGCATCAATCTTCAGCCGCTAAGCCAAGGAGTCAGTCAGAGAGCTTaGGGCCAGAGTTCCAGGGGCTCTGGGAGTGGCTGCCAGGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: SINLQPLSQGVSQRA*GQSSRGSGSGCQVS Trigger: ACTCACCTGGCAGCCACTCCCAGAGCCCCTGGAACTCTGGCCCAAAGCTCTCTGACTGACTCCTTGGCTTAGCGGCTGAAGATTGATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000675324.1 ENST00000676422.1 |
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| CDS CAA 72 bp | TGGAGACGGTGGCCTGGGCTGGGTTTAGGACCTTTTTaGGCATTTACCTGGGCGCAGGTTGTGCACCGGAGA | + |
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Preference number: 6 (lower is better) Translates to: WRRWPGLGLGPF*AFTWAQVVHRR Trigger: TCTCCGGTGCACAACCTGCGCCCAGGTAAATGCCAAAAAAGGTCCTAAACCCAGCCCAGGCCACCGTCTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000591372.2 ENST00000656137.1 ENST00000658991.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 |
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| CDS TCA 72 bp | AGTTCCAGGGGCTCTGGGAGTGGCTGCCAGGTGAGTTaGACAGTCCGATTTCCAGTGGGTTCCGGAAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: SSRGSGSGCQVS*TVRFPVGSGSE Trigger: TTCACTTCCGGAACCCACTGGAAATCGGACTGTTCAACTCACCTGGCAGCCACTCCCAGAGCCCCTGGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000675324.1 ENST00000676422.1 |
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| CDS CCA 72 bp | GTACTTCCAGCTACTCCAGGGGCTGAGGTGGGAAAATaGCGTGAATCTGGGAGGCAGATTCTTGCAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VLPATPGAEVGK*RESGRQILAGS Trigger: GCTCCCTGCAAGAATCTGCCTCCCAGATTCACGCCATTTTCCCACCTCAGCCCCTGGAGTAGCTGGAAGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000438368.7 ENST00000590622.5 ENST00000590657.2 ENST00000676298.1 |
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| CDS CCA 72 bp | AACTTAGGTGCAGTTTTAAGGGGCCTGACCCAGCCCTaGGGACCCATGTTTCTAGTTGGGCTCCGTTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: NLGAVLRGLTQP*GPMFLVGLRWP Trigger: AGGCCAACGGAGCCCAACTAGAAACATGGGTCCCCAGGGCTGGGTCAGGCCCCTTAAAACTGCACCTAAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000591372.2 ENST00000651681.2 ENST00000656137.1 ENST00000658301.1 ENST00000658991.1 ENST00000662398.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 ENST00000668768.1 |
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| CDS CAA 72 bp | AGGTGGGAAAATGGCGTGAATCTGGGAGGCAGATTCTaGCAGGGAGCCGAGATCGCCACACTACACTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RWENGVNLGGRF*QGAEIATLHSS Trigger: GCTGGAGTGTAGTGTGGCGATCTCGGCTCCCTGCAAGAATCTGCCTCCCAGATTCACGCCATTTTCCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000438368.7 ENST00000590622.5 ENST00000590657.2 ENST00000676298.1 |
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| CDS CAA 72 bp | CAGGAGGGAGTCCTTCTCTCTGGAACTGGGCGCAGGTaGTGCACCGGAGAGCTGCTTGATCTGTTAGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: QEGVLLSGTGRR*CTGELLDLLGF Trigger: AAAGCCTAACAGATCAAGCAGCTCTCCGGTGCACAACCTGCGCCCAGTTCCAGAGAGAAGGACTCCCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668768.1 |
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| CDS CAA 90 bp | TCTTCCAAGCAGGAGGGAGTCCTTCTCTCTGGAACTGGGCGCAGGTaGTGCACCGGAGAGCTGCTTGATCTGTTAGGCTTTGAAGATGGG | + |
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Preference number: 6 (lower is better) Translates to: SSKQEGVLLSGTGRR*CTGELLDLLGFEDG Trigger: CCCATCTTCAAAGCCTAACAGATCAAGCAGCTCTCCGGTGCACAACCTGCGCCCAGTTCCAGAGAGAAGGACTCCCTCCTGCTTGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668768.1 |
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| CDS GCA 72 bp | GAGGGAGTCCTTCTCTCTGGAACTGGGCGCAGGTTGTaGACCGGAGAGCTGCTTGATCTGTTAGGCTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: EGVLLSGTGRRL*TGELLDLLGFE Trigger: TTCAAAGCCTAACAGATCAAGCAGCTCTCCGGTGCACAACCTGCGCCCAGTTCCAGAGAGAAGGACTCCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668768.1 |
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| CDS CCA 72 bp | ACAGGAGATGCGATGGCTTGGCTTGGGCTCAGAGGCTaGACATTCCTGCCCTCCACTGTGAGAGTTACCAAA | + |
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Preference number: 6 (lower is better) Translates to: TGDAMAWLGLRG*TFLPSTVRVTK Trigger: TTTGGTAACTCTCACAGTGGAGGGCAGGAATGTCCAGCCTCTGAGCCCAAGCCAAGCCATCGCATCTCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000676422.1 |
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| CDS CCA 72 bp | ATCTGGGTGTATACGTGCAAGTCACAGGAGATGCGATaGCTTGGCTTGGGCTCAGAGGCTGGACATTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: IWVYTCKSQEMR*LGLGSEAGHSC Trigger: GCAGGAATGTCCAGCCTCTGAGCCCAAGCCAAGCCATCGCATCTCCTGTGACTTGCACGTATACACCCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000676422.1 |
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| CDS TCA 72 bp | ATGTCCTTTACAGTGGATTACAGCCACCTGCTGAGGTaGGTAGCCCACGCTCCTGGTAGATGGCTCCACGTA | + |
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Preference number: 6 (lower is better) Translates to: MSFTVDYSHLLR*VAHAPGRWLHV Trigger: TACGTGGAGCCATCTACCAGGAGCGTGGGCTACTCACCTCAGCAGGTGGCTGTAATCCACTGTAAAGGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000591372.2 ENST00000656137.1 ENST00000658991.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 ENST00000668768.1 |
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| CDS TCA 72 bp | ATTGTCAGGCAGATCTGGCCCATCGGAGAGCCTGAGTaGGGGCGATCAATTCAGCCTTTTGTGCTGAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: IVRQIWPIGEPE*GRSIQPFVLRC Trigger: ACACCTCAGCACAAAAGGCTGAATTGATCGCCCTCACTCAGGCTCTCCGATGGGCCAGATCTGCCTGACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658301.1 |
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| CDS CAA 72 bp | CCGTGGAGCTACAAACTGGAGGACAAGCGCAAGCCCTaGTCCTCCCCCATTCATTCACCATTCACACAGAGT | + |
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Preference number: 6 (lower is better) Translates to: PWSYKLEDKRKP*SSPIHSPFTQS Trigger: ACTCTGTGTGAATGGTGAATGAATGGGGGAGGACAAGGGCTTGCGCTTGTCCTCCAGTTTGTAGCTCCACGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661195.1 |
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| CDS CCA 72 bp | AAAACCAGGGCTCTACCCTCTAGCATCCTAGAGAAATaGGCAGAGTCAAAAGAGGGACACCCTCATCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: KTRALPSSILEK*AESKEGHPHQG Trigger: ACCCTGATGAGGGTGTCCCTCTTTTGACTCTGCCCATTTCTCTAGGATGCTAGAGGGTAGAGCCCTGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661195.1 |
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| CDS TCA 72 bp | TCAGCCTTTTGTGCTGAGGTGTTTGCTGGTAAAGCCTaGGCCCACAACACATCTGTCTCCATGGTAACAGCT | + |
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Preference number: 6 (lower is better) Translates to: SAFCAEVFAGKA*AHNTSVSMVTA Trigger: AGCTGTTACCATGGAGACAGATGTGTTGTGGGCTCAGGCTTTACCAGCAAACACCTCAGCACAAAAGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000591372.2 ENST00000656137.1 ENST00000658301.1 ENST00000658991.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 ENST00000668768.1 ENST00000675074.1 |
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| CDS TCA 72 bp | GTGGAAAGGAGACTGTGGGCAGCAAGTTTAGAGGCGTaGCTGAAAGTCACACTGCATCTTGAGCTGCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: VERRLWAASLEA*LKVTLHLELLN Trigger: ATTCAGCAGCTCAAGATGCAGTGTGACTTTCAGTCACGCCTCTAAACTTGCTGCCCACAGTCTCCTTTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000591372.2 ENST00000656137.1 ENST00000658991.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 ENST00000668768.1 |
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| CDS GCA 72 bp | ATTAGAGATAGAAAAAGAGAGAGAGAGAGACCAGTCTaGCAGAAACCAGGACTCAGTCCCCCAGCATCCTGG | + |
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Preference number: 6 (lower is better) Translates to: IRDRKRERERPV*QKPGLSPPASW Trigger: CCAGGATGCTGGGGGACTGAGTCCTGGTTTCTGGCAGACTGGTCTCTCTCTCTCTCTTTTTCTATCTCTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000661195.1 |
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| CDS CCA 72 bp | GAGGGAGTAGGGGTATCTTATACTTGTGGGTTAAGGTaGGGGGATACAAGAGGAGGATGCAAAGGAGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: EGVGVSYTCGLR*GDTRGGCKGGF Trigger: AAAGCCTCCTTTGCATCCTCCTCTTGTATCCCCCCACCTTAACCCACAAGTATAAGATACCCCTACTCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000675324.1 |
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| CDS CAA 90 bp | ACCAAATTTCATGCCCGTCCATGTGAAGAGACCACCAAACAGGCTTaGTGTGAGCAACATGGCTGTTTATTTCAACTGGGTGCAGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: TKFHARPCEETTKQA*CEQHGCLFQLGAGG Trigger: CCCACCTGCACCCAGTTGAAATAAACAGCCATGTTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACATGGACGGGCATGAAATTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675324.1 |
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| CDS TCA 72 bp | AAGTTTAGAGGCGTGACTGAAAGTCACACTGCATCTTaGGCTGCTGAATCAGCTTTCTGGTTACCACGGGCA | + |
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Preference number: 6 (lower is better) Translates to: KFRGVTESHTAS*AAESAFWLPRA Trigger: TGCCCGTGGTAACCAGAAAGCTGATTCAGCAGCTCAAGATGCAGTGTGACTTTCAGTCACGCCTCTAAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000591372.2 ENST00000656137.1 ENST00000658991.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 ENST00000668768.1 |
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| CDS CCA 72 bp | TTCAGGAATTGGATTGGGATGGGTTCCTCGAACAAGTaGCAGGATGATATCTTGTACCTGTTGGGGAGACTG | + |
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Preference number: 6 (lower is better) Translates to: FRNWIGMGSSNK*QDDILYLLGRL Trigger: CAGTCTCCCCAACAGGTACAAGATATCATCCTGCCACTTGTTCGAGGAACCCATCCCAATCCAATTCCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000591372.2 ENST00000662398.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 |
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| CDS CCA 72 bp | GGCAGGGGTGGATCTCACAAAGTATATTCTCAAGGGTaGGAAGAATTTCAAAGAGCCTTCTTAAGGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: GRGGSHKVYSQG*EEFQRAFLRVG Trigger: CCCCACCCTTAAGAAGGCTCTTTGAAATTCTTCCCACCCTTGAGAATATACTTTGTGAGATCCACCCCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676422.1 |
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| CDS CAA 72 bp | TTTCTGGTTACCACGGGCAACAGCCGTGTTTTCCTTTaGATGTCCTTTACAGTGGATTACAGCCACCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: FLVTTGNSRVFL*MSFTVDYSHLL Trigger: CAGCAGGTGGCTGTAATCCACTGTAAAGGACATCAAAAGGAAAACACGGCTGTTGCCCGTGGTAACCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000591372.2 ENST00000656137.1 ENST00000658991.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 ENST00000668768.1 |
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| CDS CAA 72 bp | CATGCCCGTCCATGTGAAGAGACCACCAAACAGGCTTaGTGTGAGCAACATGGCTGTTTATTTCAACTGGGT | + |
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Preference number: 6 (lower is better) Translates to: HARPCEETTKQA*CEQHGCLFQLG Trigger: ACCCAGTTGAAATAAACAGCCATGTTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACATGGACGGGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675324.1 |
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| CDS TCA 72 bp | AGCCTTCTTAAGGGTGGGGGATATTACGGAGTACATTaGTCAGTTAGGGTGGGGCAGGAACAAATCACAATG | + |
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Preference number: 6 (lower is better) Translates to: SLLKGGGYYGVH*SVRVGQEQITM Trigger: CATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATGTACTCCGTAATATCCCCCACCCTTAAGAAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000676422.1 |
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| CDS CCA 72 bp | TTCAGGAATTGGATTGGGATGGGTTCCTCGAACAAGTaGCAGGATGATATCTTGTACCTGTTGGGGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: FRNWIGMGSSNK*QDDILYLLGRL Trigger: AAGTCTCCCCAACAGGTACAAGATATCATCCTGCCACTTGTTCGAGGAACCCATCCCAATCCAATTCCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658301.1 |
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| CDS CCA 72 bp | ACTTCTTTTGTGGATCTTCAGTTACTTCAGGCCATCTaGGTGTATACGTGCAAGTCACAGGAGATGCGATGG | + |
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Preference number: 6 (lower is better) Translates to: TSFVDLQLLQAI*VYTCKSQEMRW Trigger: CCATCGCATCTCCTGTGACTTGCACGTATACACCCAGATGGCCTGAAGTAACTGAAGATCCACAAAAGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676422.1 |
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| CDS CAA 72 bp | GAGGATCCAGGGGCCTGGGGACTTGTTAAATACAGATaGTTGGGTCTCACTCCTAGAGTTTCTTCTTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: EDPGAWGLVKYR*LGLTPRVSSSV Trigger: TACTGAAGAAGAAACTCTAGGAGTGAGACCCAACAATCTGTATTTAACAAGTCCCCAGGCCCCTGGATCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658042.1 ENST00000665982.1 ENST00000675167.1 |
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| CDS TCA 72 bp | CCACCAACCTTCCTGATTTTTATTGGCTCTGAGTTCTaGGGCCAGTTTTCTTCTTCTGTTGAGTATGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: PPTFLIFIGSEF*GQFSSSVEYAG Trigger: TCCCGCATACTCAACAGAAGAAGAAAACTGGCCTCAGAACTCAGAGCCAATAAAAATCAGGAAGGTTGGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000591372.2 ENST00000656137.1 ENST00000658991.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 ENST00000668768.1 |
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| CDS TCA 72 bp | AGCTTTGCTCCTCCTAAATGGGTGGTAGACTGTAGGTaGCTGATTAAAGTTTTCCCAAGAGTTCGGGGTATG | + |
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Preference number: 6 (lower is better) Translates to: SFAPPKWVVDCR*LIKVFPRVRGM Trigger: CATACCCCGAACTCTTGGGAAAACTTTAATCAGTCACCTACAGTCTACCACCCATTTAGGAGGAGCAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000591372.2 ENST00000656137.1 ENST00000658991.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 ENST00000668768.1 |
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| CDS CCA 72 bp | CCTCGAACAAGTGGCAGGATGATATCTTGTACCTGTTaGGGAGACTTCCTGATTTTTATTGGCTCTGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: PRTSGRMISCTC*GDFLIFIGSEF Trigger: GAACTCAGAGCCAATAAAAATCAGGAAGTCTCCCCAACAGGTACAAGATATCATCCTGCCACTTGTTCGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658301.1 |
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| CDS CAA 72 bp | GATCCAGGGGCCTGGGGACTTGTTAAATACAGATTGTaGGGTCTCACTCCTAGAGTTTCTTCTTCAGTATTC | + |
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Preference number: 6 (lower is better) Translates to: DPGAWGLVKYRL*GLTPRVSSSVF Trigger: GAATACTGAAGAAGAAACTCTAGGAGTGAGACCCAACAATCTGTATTTAACAAGTCCCCAGGCCCCTGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658042.1 ENST00000665982.1 ENST00000675167.1 |
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| CDS GCA 72 bp | TACCCAGACGTCTTGGGCAATATCGACGTCCTGACATaGAAAACCTTGACAACCACTAAACAAGACAATAGA | + |
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Preference number: 6 (lower is better) Translates to: YPDVLGNIDVLT*KTLTTTKQDNR Trigger: TCTATTGTCTTGTTTAGTGGTTGTCAAGGTTTTGCATGTCAGGACGTCGATATTGCCCAAGACGTCTGGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661195.1 |
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| CDS CCA 72 bp | ATCCAGGGGCCTGGGGACTTGTTAAATACAGATTGTTaGGTCTCACTCCTAGAGTTTCTTCTTCAGTATTCT | + |
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Preference number: 6 (lower is better) Translates to: IQGPGDLLNTDC*VSLLEFLLQYS Trigger: AGAATACTGAAGAAGAAACTCTAGGAGTGAGACCCAACAATCTGTATTTAACAAGTCCCCAGGCCCCTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658042.1 ENST00000665982.1 ENST00000675167.1 |
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| CDS CCA 72 bp | CCGGCTGAGTCCGAAAAGAGAGTCAATGAAGGGAGATaGATTATCATTAGTTCTTGTAGGTTTTGGGTTAGG | + |
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Preference number: 6 (lower is better) Translates to: PAESEKRVNEGR*IIISSCRFWVR Trigger: CCTAACCCAAAACCTACAAGAACTAATGATAATCCATCTCCCTTCATTGACTCTCTTTTCGGACTCAGCCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000676422.1 |
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| CDS CAA 72 bp | GTCTTGGGCAATATCGACGTCCTGACATGCAAAACCTaGACAACCACTAAACAAGACAATAGACACCGAACA | + |
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Preference number: 6 (lower is better) Translates to: VLGNIDVLTCKT*TTTKQDNRHRT Trigger: TGTTCGGTGTCTATTGTCTTGTTTAGTGGTTGTCAAGGTTTTGCATGTCAGGACGTCGATATTGCCCAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661195.1 |
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| CDS CAA 72 bp | TTCCAAGCAGGAGGGAGTCCTTCTCTCTGGAACATATaGACAGTTTCGTTTTTGGTAGCAAATGCTTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: FQAGGSPSLWNI*TVSFLVANASV Trigger: GACTGAAGCATTTGCTACCAAAAACGAAACTGTCAATATGTTCCAGAGAGAAGGACTCCCTCCTGCTTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656137.1 |
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| CDS GCA 72 bp | CTGGAACATATTGACAGTTTCGTTTTTGGTAGCAAATaGTTCAGTCCATCCAGAGAAGGTGTCTACCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: LEHIDSFVFGSK*FSPSREGVYQY Trigger: GTACTGGTAGACACCTTCTCTGGATGGACTGAAGCATTTGCTACCAAAAACGAAACTGTCAATATGTTCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656137.1 |
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| CDS CCA 72 bp | TGCATAAAAGAATATTGTCTAAGTTGGCACCAGAGCTaGGGAGTTTTAAGAGGTTTAGAAGCCTGGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: CIKEYCLSWHQS*GVLRGLEAWLS Trigger: TGACAGCCAGGCTTCTAAACCTCTTAAAACTCCCCAGCTCTGGTGCCAACTTAGACAATATTCTTTTATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000675324.1 |
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| CDS TCA 72 bp | AAGATTCTAGAGTCAGGAAGAATCCACCAACCTTCCTaGTTTTTATTGGCTCTGAGTTCTGAGGCCAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: KILESGRIHQPS*FLLALSSEASF Trigger: AAAACTGGCCTCAGAACTCAGAGCCAATAAAAATCAGGAAGGTTGGTGGATTCTTCCTGACTCTAGAATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000591372.2 ENST00000656137.1 ENST00000658991.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 ENST00000668768.1 |
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| CDS GCA 72 bp | AACTACCATATTGACAGTTTCGTTTTTGGTAGCAAATaGTTCAGTCCATCCAGAGAAGGTGTCTACCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: NYHIDSFVFGSK*FSPSREGVYQY Trigger: GTACTGGTAGACACCTTCTCTGGATGGACTGAAGCATTTGCTACCAAAAACGAAACTGTCAATATGGTAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000591372.2 ENST00000658991.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 |
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| CDS GCA 72 bp | CAATTGGACGAATTCCTGGGAACTGCGGATATAGCTTaGCACAGTATCTTATCAGTTAATTGCATTCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: QLDEFLGTADIA*HSILSVNCILG Trigger: TCCAAGAATGCAATTAACTGATAAGATACTGTGGCAAGCTATATCCGCAGTTCCCAGGAATTCGTCCAATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000591372.2 ENST00000651681.2 ENST00000656137.1 ENST00000658301.1 ENST00000658991.1 ENST00000662398.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 ENST00000668768.1 |
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| CDS CAA 72 bp | AGAAAGAGCAGAAAAACCACAACAGCTAAATACCACTaGCCACATCACTGTAGCTTTAAGATTGAGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: RKSRKTTTAKYH*PHHCSFKIEGG Trigger: TCCTCCCTCAATCTTAAAGCTACAGTGATGTGGCAAGTGGTATTTAGCTGTTGTGGTTTTTCTGCTCTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661195.1 |
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| CDS CAA 72 bp | GTGAATCTGTATTTCCAGCATGATTTTCAGGTGCTATaGATACTGTTGGTCCAAGGACCACACTATGATCTA | + |
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Preference number: 6 (lower is better) Translates to: VNLYFQHDFQVL*ILLVQGPHYDL Trigger: TAGATCATAGTGTGGTCCTTGGACCAACAGTATCAATAGCACCTGAAAATCATGCTGGAAATACAGATTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658042.1 ENST00000665982.1 |
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| CDS CAA 90 bp | CCATGTCGAGGGATGATTTCATTGAGTAAAAACTTAACTACCATATaGACAGTTTCGTTTTTGGTAGCAAATGCTTCAGTCCATCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: PCRGMISLSKNLTTI*TVSFLVANASVHPE Trigger: CTCTGGATGGACTGAAGCATTTGCTACCAAAAACGAAACTGTCAATATGGTAGTTAAGTTTTTACTCAATGAAATCATCCCTCGACATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000591372.2 ENST00000658991.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 |
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| CDS TCA 72 bp | ATCACAATGATGGAATGTAATCACTTAAAGCTATTTTaGCTTCTTTTGTGGATCTTCAGTTACTTCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: ITMMECNHLKLF*LLLWIFSYFRP Trigger: TGGCCTGAAGTAACTGAAGATCCACAAAAGAAGTCAAAATAGCTTTAAGTGATTACATTCCATCATTGTGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000676422.1 |
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| CDS CAA 72 bp | GGGATGATTTCATTGAGTAAAAACTTAACTACCATATaGACAGTTTCGTTTTTGGTAGCAAATGCTTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: GMISLSKNLTTI*TVSFLVANASV Trigger: GACTGAAGCATTTGCTACCAAAAACGAAACTGTCAATATGGTAGTTAAGTTTTTACTCAATGAAATCATCCC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000591372.2 ENST00000658991.1 ENST00000666458.1 ENST00000667789.1 ENST00000667829.1 |
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