Pregenerated sensors for LINC00664 (Homo sapiens)
Ensembl gene IDs: ENSG00000268658Ensembl transcript IDs: ENST00000596203.1, ENST00000596718.5, ENST00000599078.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GATACCTGGAACCCAGGAGTCCAAGACTATCCGGGGCCAACATGGTaGGACAGCATCTCTGCGGCACCCTCAGAGCAGCATGTGGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: DTWNPGVQDYPGPTW*DSISAAPSEQHVAP Trigger: AGGGGCCACATGCTGCTCTGAGGGTGCCGCAGAGATGCTGTCTCACCATGTTGGCCCCGGATAGTCTTGGACTCCTGGGTTCCAGGTATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596718.5 |
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| CDS TCA 90 bp | CAGGGGACAGGCAGTAGAGTCCCATCACCTGGGTGCTGGGCTCAGTaGTATGTCACAATGCTCCCTGTGAGCAAAGCTCAGGCAGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: QGTGSRVPSPGCWAQ*YVTMLPVSKAQAGE Trigger: TTCTCCTGCCTGAGCTTTGCTCACAGGGAGCATTGTGACATATCACTGAGCCCAGCACCCAGGTGATGGGACTCTACTGCCTGTCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS TCA 90 bp | CAATCACACCTGGGTTTCGGGGCAGTGATATGTCACAATCTTCTCTaGGGGCAGGGACCAGGCAGCAGTGTCACATCACCTTGGTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: QSHLGFGAVICHNLL*GQGPGSSVTSPWCS Trigger: GGAGCACCAAGGTGATGTGACACTGCTGCCTGGTCCCTGCCCTCAGAGAAGATTGTGACATATCACTGCCCCGAAACCCAGGTGTGATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS TCA 90 bp | CTGCATCATCTGGTTGCTGGGCCAGGGATATGTCACAATCTTCCCTaGGAACAGGCACCAGGCAGAAGACTTATCACCTGGGTGCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: LHHLVAGPGICHNLP*EQAPGRRLITWVLG Trigger: ACCAAGCACCCAGGTGATAAGTCTTCTGCCTGGTGCCTGTTCTCAGGGAAGATTGTGACATATCCCTGGCCCAGCAACCAGATGATGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS CCA 90 bp | GTGCTCAGCCAGGGATATGTTACAATTCTGTCATCACCTAAGTGCTaGGTCCAGCAATGCGGCACAATCCCATCTGTACGCTGGGCCCAA | + |
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Preference number: 5 (lower is better) Translates to: VLSQGYVTILSSPKC*VQQCGTIPSVRWAQ Trigger: TTGGGCCCAGCGTACAGATGGGATTGTGCCGCATTGCTGGACCCAGCACTTAGGTGATGACAGAATTGTAACATATCCCTGGCTGAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599078.1 |
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| CDS TCA 90 bp | CTTATCACCTGGGTGCTTGGTCAGAGATATGTTACAATTTCCTCCTaGAAGCAGGGGACAGGCAGTAGAGTCCCATCACCTGGGTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LITWVLGQRYVTISS*KQGTGSRVPSPGCW Trigger: CCAGCACCCAGGTGATGGGACTCTACTGCCTGTCCCCTGCTTTCAGGAGGAAATTGTAACATATCTCTGACCAAGCACCCAGGTGATAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS TCA 90 bp | AGTATGCCACAATCTCCTTTGTGGGCAGAACCTGTGGATAGAGAGTaGGCAGGAGAGATACGTCATCTGCATCATCTGGTTGCTGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: SMPQSPLWAEPVDRE*AGEIRHLHHLVAGP Trigger: TGGCCCAGCAACCAGATGATGCAGATGACGTATCTCTCCTGCTCACTCTCTATCCACAGGTTCTGCCCACAAAGGAGATTGTGGCATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS GCA 90 bp | GAAGAGGAGAATTATATCACATCACCTAAGTGCTGGGTCCAGCAATaGGGCACAATCCCATCTGTACGCTGGGCCCAAGCAGAAGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: EEENYITSPKCWVQQ*GTIPSVRWAQAEES Trigger: TGACTCTTCTGCTTGGGCCCAGCGTACAGATGGGATTGTGCCGCATTGCTGGACCCAGCACTTAGGTGATGTGATATAATTCTCCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596718.5 |
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| CDS GCA 90 bp | GACCAGGCAGCAGTGTCACATCACCTTGGTGCTCCATTAGGAATATaGTACAATCCCCTCCTGTGTGATGGGTGCAGGGATATGTCACAA | + |
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Preference number: 5 (lower is better) Translates to: DQAAVSHHLGAPLGI*YNPLLCDGCRDMSQ Trigger: TTGTGACATATCCCTGCACCCATCACACAGGAGGGGATTGTAGCATATTCCTAATGGAGCACCAAGGTGATGTGACACTGCTGCCTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599078.1 |
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| CDS CCA 90 bp | CTGTGGATAGAGAGTGAGCAGGAGAGATACGTCATCTGCATCATCTaGTTGCTGGGCCAGGGATATGTCACAATCTTCCCTGAGAACAGG | + |
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Preference number: 5 (lower is better) Translates to: LWIESEQERYVICII*LLGQGYVTIFPENR Trigger: CCTGTTCTCAGGGAAGATTGTGACATATCCCTGGCCCAGCAACCAGATGATGCAGATGACGTATCTCTCCTGCTCACTCTCTATCCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS TCA 90 bp | ATGGGTGCAGATATATGTCACAAGGTCCCTAGGTGCTGGGTTCAGTaGTTTGCCATAATCTCCCACTTTTTGGCAGGGCCAGGCAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: MGADICHKVPRCWVQ*FAIISHFLAGPGRR Trigger: TCTTCTGCCTGGCCCTGCCAAAAAGTGGGAGATTATGGCAAATCACTGAACCCAGCACCTAGGGACCTTGTGACATATATCTGCACCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000596718.5 |
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| CDS TCA 90 bp | CATAATCTGCTGAGGGAAGAAGCCAAGCAGGAGTGTCACATCACCTaGGTGCTCAGCCAGGGATATGTTACAATTCTGGTGTCTGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: HNLLREEAKQECHIT*VLSQGYVTILVSGS Trigger: GGAACCAGACACCAGAATTGTAACATATCCCTGGCTGAGCACTCAGGTGATGTGACACTCCTGCTTGGCTTCTTCCCTCAGCAGATTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596718.5 |
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| CDS CCA 90 bp | CATCACCTGAGTGCTCAGCCAGGGATATGTTACAATTCTGGTGTCTaGTTCCAAGGATATGTCACAATCATTCCTGTGCAGGGCAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: HHLSAQPGICYNSGV*FQGYVTIIPVQGRV Trigger: CACCCTGCCCTGCACAGGAATGATTGTGACATATCCTTGGAACCAGACACCAGAATTGTAACATATCCCTGGCTGAGCACTCAGGTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596718.5 |
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| CDS CCA 90 bp | AGTGTCACATCACCTGAGTGCTCAGCCAGGGATATGTTACAATTCTaGTGTCTGGTTCCAAGGATATGTCACAATCATTCCTGTGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: SVTSPECSARDMLQF*CLVPRICHNHSCAG Trigger: CCCTGCACAGGAATGATTGTGACATATCCTTGGAACCAGACACCAGAATTGTAACATATCCCTGGCTGAGCACTCAGGTGATGTGACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596718.5 |
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| CDS TCA 90 bp | CTTATGATGAATAGAACAGTCACACTTGCTTGGTACTGGGCCAAGTaGTATGTCACAATTCCCCCTGGATTTCAGCCATGGATATCTCAT | + |
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Preference number: 5 (lower is better) Translates to: LMMNRTVTLAWYWAK*YVTIPPGFQPWISH Trigger: ATGAGATATCCATGGCTGAAATCCAGGGGGAATTGTGACATATCACTTGGCCCAGTACCAAGCAAGTGTGACTGTTCTATTCATCATAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS GCA 90 bp | ACAGATGACTACATTCAAACGTTTACATCTTTTGAGAGAATACAGTaGAGTAGGAAGATTACCATTTTGACTATCAGGAGGATAATACCA | + |
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Preference number: 5 (lower is better) Translates to: TDDYIQTFTSFERIQ*SRKITILTIRRIIP Trigger: TGGTATTATCCTCCTGATAGTCAAAATGGTAATCTTCCTACTGCACTGTATTCTCTCAAAAGATGTAAACGTTTGAATGTAGTCATCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000599078.1 |
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| CDS CCA 72 bp | ACCGGGTCCACACTACGCGCCAAGTGTGGCCGAGTGTaGCGCGCGGGGCCTGAGCCCGTCCGTCTGGAGTAT | + |
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Preference number: 6 (lower is better) Translates to: TGSTLRAKCGRV*RAGPEPVRLEY Trigger: ATACTCCAGACGGACGGGCTCAGGCCCCGCGCGCCACACTCGGCCACACTTGGCGCGTAGTGTGGACCCGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599078.1 |
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| CDS GCA 72 bp | AGACTATCCGGGGCCAACATGGTGAGACAGCATCTCTaGGGCACCCTCAGAGCAGCATGTGGCCCCTTCGGC | + |
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Preference number: 6 (lower is better) Translates to: RLSGANMVRQHL*GTLRAACGPFG Trigger: GCCGAAGGGGCCACATGCTGCTCTGAGGGTGCCGCAGAGATGCTGTCTCACCATGTTGGCCCCGGATAGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596718.5 |
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| CDS TCA 72 bp | AACCCAGGAGTCCAAGACTATCCGGGGCCAACATGGTaGGACAGCATCTCTGCGGCACCCTCAGAGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: NPGVQDYPGPTW*DSISAAPSEQH Trigger: ATGCTGCTCTGAGGGTGCCGCAGAGATGCTGTCTCACCATGTTGGCCCCGGATAGTCTTGGACTCCTGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596718.5 |
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| CDS CAA 72 bp | CAGGGATATGTCACAAGATCTTCTGTAGGCAGGACCTaGGGGCTGACATCTGGTCGACCCAGCGGCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: QGYVTRSSVGRT*GLTSGRPSGWT Trigger: TGTCCAGCCGCTGGGTCGACCAGATGTCAGCCCCAAGGTCCTGCCTACAGAAGATCTTGTGACATATCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599078.1 |
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| CDS TCA 72 bp | CTGGGTTTCGGGGCAGTGATATGTCACAATCTTCTCTaGGGGCAGGGACCAGGCAGCAGTGTCACATCACCT | + |
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Preference number: 6 (lower is better) Translates to: LGFGAVICHNLL*GQGPGSSVTSP Trigger: AGGTGATGTGACACTGCTGCCTGGTCCCTGCCCTCAGAGAAGATTGTGACATATCACTGCCCCGAAACCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS TCA 72 bp | GGCAGTAGAGTCCCATCACCTGGGTGCTGGGCTCAGTaGTATGTCACAATGCTCCCTGTGAGCAAAGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: GSRVPSPGCWAQ*YVTMLPVSKAQ Trigger: CTGAGCTTTGCTCACAGGGAGCATTGTGACATATCACTGAGCCCAGCACCCAGGTGATGGGACTCTACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS GCA 72 bp | GGTCAGGGTTCAGGCAGAGGACTCACATCATCTTGGTaGTGGGCCCAGCAGTGTGTCTCAATGCCTTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: GQGSGRGLTSSW*WAQQCVSMPSK Trigger: CTTAGAAGGCATTGAGACACACTGCTGGGCCCAGCACCAAGATGATGTGAGTCCTCTGCCTGAACCCTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS GCA 72 bp | GGGCAGGGACCAGGCAGCAGTGTCACATCACCTTGGTaGTCCATTAGGAATATGCTACAATCCCCTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GQGPGSSVTSPW*SIRNMLQSPPV Trigger: CACAGGAGGGGATTGTAGCATATTCCTAATGGAGCACCAAGGTGATGTGACACTGCTGCCTGGTCCCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599078.1 |
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| CDS TCA 72 bp | CTGGTTGCTGGGCCAGGGATATGTCACAATCTTCCCTaGGAACAGGCACCAGGCAGAAGACTTATCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: LVAGPGICHNLP*EQAPGRRLITW Trigger: CCAGGTGATAAGTCTTCTGCCTGGTGCCTGTTCTCAGGGAAGATTGTGACATATCCCTGGCCCAGCAACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS GCA 72 bp | GCAGTGTCACATCACCTTGGTGCTCCATTAGGAATATaGTACAATCCCCTCTGTATGGAGGTCCCAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: AVSHHLGAPLGI*YNPLCMEVPGW Trigger: CCAGCCTGGGACCTCCATACAGAGGGGATTGTAGCATATTCCTAATGGAGCACCAAGGTGATGTGACACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596718.5 |
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| CDS GCA 72 bp | GGGCAGGGACCAGGCAGCAGTGTCACATCACCTTGGTaGTCCATTAGGAATATGCTACAATCCCCTCTGTAT | + |
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Preference number: 6 (lower is better) Translates to: GQGPGSSVTSPW*SIRNMLQSPLY Trigger: ATACAGAGGGGATTGTAGCATATTCCTAATGGAGCACCAAGGTGATGTGACACTGCTGCCTGGTCCCTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596718.5 |
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| CDS CCA 72 bp | CAAAGCTCAGGCAGGAGAAACACATCGCCTGATTTCTaGGCCAGAAGATACATCACGGTCTCCCCTATGAGC | + |
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Preference number: 6 (lower is better) Translates to: QSSGRRNTSPDF*ARRYITVSPMS Trigger: GCTCATAGGGGAGACCGTGATGTATCTTCTGGCCCAGAAATCAGGCGATGTGTTTCTCCTGCCTGAGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS CAA 90 bp | TGGATAGAGAGTGAGCAGGAGAGATACGTCATCTGCATCATCTGGTaGCTGGGCCAGGGATATGTCACAATCTTCCCTGAGAACAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: WIESEQERYVICIIW*LGQGYVTIFPENRH Trigger: GTGCCTGTTCTCAGGGAAGATTGTGACATATCCCTGGCCCAGCAACCAGATGATGCAGATGACGTATCTCTCCTGCTCACTCTCTATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS TCA 72 bp | GGTGTATGTAACAATCACACCTGGGTTTCGGGGCAGTaGTATGTCACAATCTTCTCTGAGGGCAGGGACCAG | + |
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Preference number: 6 (lower is better) Translates to: GVCNNHTWVSGQ*YVTIFSEGRDQ Trigger: CTGGTCCCTGCCCTCAGAGAAGATTGTGACATATCACTGCCCCGAAACCCAGGTGTGATTGTTACATACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS TCA 72 bp | CTGAGGGAAGAAGCCAAGCAGGAGTGTCACATCACCTaGGTGCTCAGCCAGGGATATGTTACAATTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LREEAKQECHIT*VLSQGYVTILV Trigger: CACCAGAATTGTAACATATCCCTGGCTGAGCACTCAGGTGATGTGACACTCCTGCTTGGCTTCTTCCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596718.5 |
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| CDS GCA 72 bp | GGGAAGAAGCCAAGCAGGAGTGTCACATCACCTGAGTaGTCAGCCAGGGATATGTTACAATTCTGGTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: GKKPSRSVTSPE*SARDMLQFWCL Trigger: CAGACACCAGAATTGTAACATATCCCTGGCTGAGCACTCAGGTGATGTGACACTCCTGCTTGGCTTCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596718.5 |
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| CDS GCA 72 bp | GTGAGCAGGAGAGATACGTCATCTGCATCATCTGGTTaGTGGGCCAGGGATATGTCACAATCTTCCCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: VSRRDTSSASSG*WARDMSQSSLR Trigger: TCTCAGGGAAGATTGTGACATATCCCTGGCCCAGCAACCAGATGATGCAGATGACGTATCTCTCCTGCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS GCA 72 bp | GCAGTGTCACATCACCTTGGTGCTCCATTAGGAATATaGTACAATCCCCTCCTGTGTGATGGGTGCAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: AVSHHLGAPLGI*YNPLLCDGCRD Trigger: ATCCCTGCACCCATCACACAGGAGGGGATTGTAGCATATTCCTAATGGAGCACCAAGGTGATGTGACACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599078.1 |
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| CDS CCA 72 bp | GCAGTATGCCACAATCTCCTTTGTGGGCAGAACCTGTaGATAGAGAGTGAGCAGGAGAGATACGTCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: AVCHNLLCGQNL*IESEQERYVIC Trigger: GCAGATGACGTATCTCTCCTGCTCACTCTCTATCCACAGGTTCTGCCCACAAAGGAGATTGTGGCATACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS CAA 72 bp | AGTGAGCAGGAGAGATACGTCATCTGCATCATCTGGTaGCTGGGCCAGGGATATGTCACAATCTTCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SEQERYVICIIW*LGQGYVTIFPE Trigger: CTCAGGGAAGATTGTGACATATCCCTGGCCCAGCAACCAGATGATGCAGATGACGTATCTCTCCTGCTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS TCA 72 bp | CCCCTGGATTTCAGCCATGGATATCTCATAATCTGCTaGGGGAAGAAGCCAAGCAGGAGTGTCACATCACCT | + |
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Preference number: 6 (lower is better) Translates to: PLDFSHGYLIIC*GKKPSRSVTSP Trigger: AGGTGATGTGACACTCCTGCTTGGCTTCTTCCCTCAGCAGATTATGAGATATCCATGGCTGAAATCCAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS TCA 72 bp | TGGGTGCTTGGTCAGAGATATGTTACAATTTCCTCCTaGAAGCAGGGGACAGGCAGTAGAGTCCCATCACCT | + |
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Preference number: 6 (lower is better) Translates to: WVLGQRYVTISS*KQGTGSRVPSP Trigger: AGGTGATGGGACTCTACTGCCTGTCCCCTGCTTTCAGGAGGAAATTGTAACATATCTCTGACCAAGCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS TCA 72 bp | CTGAGGGAAGAAGCCAAGCAGGAGTGTCACATCACCTaGGTGCTCAGCCAGGGATATGTTACAATTCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: LREEAKQECHIT*VLSQGYVTILS Trigger: TGACAGAATTGTAACATATCCCTGGCTGAGCACTCAGGTGATGTGACACTCCTGCTTGGCTTCTTCCCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599078.1 |
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| CDS GCA 72 bp | GGGAAGAAGCCAAGCAGGAGTGTCACATCACCTGAGTaGTCAGCCAGGGATATGTTACAATTCTGTCATCAC | + |
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Preference number: 6 (lower is better) Translates to: GKKPSRSVTSPE*SARDMLQFCHH Trigger: GTGATGACAGAATTGTAACATATCCCTGGCTGAGCACTCAGGTGATGTGACACTCCTGCTTGGCTTCTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599078.1 |
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| CDS CCA 72 bp | CAGGGATATGTTACAATTCTGTCATCACCTAAGTGCTaGGTCCAGCAATGCGGCACAATCCCATCTGTACGC | + |
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Preference number: 6 (lower is better) Translates to: QGYVTILSSPKC*VQQCGTIPSVR Trigger: GCGTACAGATGGGATTGTGCCGCATTGCTGGACCCAGCACTTAGGTGATGACAGAATTGTAACATATCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599078.1 |
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| CDS CAA 90 bp | CATCACCAAGGTGCTGGGTCCAGTGATATGTCACAATCACCCTTTTaGGCAGGTTCCAGTGAAAAGACGAGAGTCATAACACCTGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: HHQGAGSSDMSQSPF*AGSSEKTRVITPGL Trigger: AAGCCCAGGTGTTATGACTCTCGTCTTTTCACTGGAACCTGCCAAAAAGGGTGATTGTGACATATCACTGGACCCAGCACCTTGGTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596203.1 |
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| CDS TCA 72 bp | GATATATGTCACAAGGTCCCTAGGTGCTGGGTTCAGTaGTTTGCCATAATCTCCCACTTTTTGGCAGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: DICHKVPRCWVQ*FAIISHFLAGP Trigger: TGGCCCTGCCAAAAAGTGGGAGATTATGGCAAATCACTGAACCCAGCACCTAGGGACCTTGTGACATATATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000596718.5 |
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| CDS TCA 72 bp | CTGGGCCAAGGCAAAACAGTAATGTCACATTGGTGTTaGGCCCCACAATATGTCCCAATCTCCCTTGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: LGQGKTVMSHWC*APQYVPISLES Trigger: GCTTTCAAGGGAGATTGGGACATATTGTGGGGCTCAACACCAATGTGACATTACTGTTTTGCCTTGGCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS TCA 72 bp | CAATCTCCTTTGTGGGCAGAACCTGTGGATAGAGAGTaGGCAGGAGAGATACGTCATCTGCATCATCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: QSPLWAEPVDRE*AGEIRHLHHLV Trigger: AACCAGATGATGCAGATGACGTATCTCTCCTGCTCACTCTCTATCCACAGGTTCTGCCCACAAAGGAGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS GCA 72 bp | CAGGCAGAAGAGGAGAATTATATCACATCACCTAAGTaGTGGGTCCAGCAATGCGGCACAATCCCATCTGTA | + |
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Preference number: 6 (lower is better) Translates to: QAEEENYITSPK*WVQQCGTIPSV Trigger: TACAGATGGGATTGTGCCGCATTGCTGGACCCAGCACTTAGGTGATGTGATATAATTCTCCTCTTCTGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596718.5 |
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| CDS GCA 72 bp | AGCCAGGGATATGTTACAATTCTGTCATCACCTAAGTaGTGGGTCCAGCAATGCGGCACAATCCCATCTGTA | + |
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Preference number: 6 (lower is better) Translates to: SQGYVTILSSPK*WVQQCGTIPSV Trigger: TACAGATGGGATTGTGCCGCATTGCTGGACCCAGCACTTAGGTGATGACAGAATTGTAACATATCCCTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599078.1 |
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| CDS GCA 72 bp | GAGAACAGGCACCAGGCAGAAGACTTATCACCTGGGTaGTTGGTCAGAGATATGTTACAATTTCCTCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: ENRHQAEDLSPG*LVRDMLQFPPE Trigger: TTCAGGAGGAAATTGTAACATATCTCTGACCAAGCACCCAGGTGATAAGTCTTCTGCCTGGTGCCTGTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS GCA 72 bp | AGAAGTAACATCACCTTAGTGTTAGGCCCAGCAGTATaGCACAATCTCCTTTGTGGGCAGAACCTGTGGATA | + |
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Preference number: 6 (lower is better) Translates to: RSNITLVLGPAV*HNLLCGQNLWI Trigger: TATCCACAGGTTCTGCCCACAAAGGAGATTGTGGCATACTGCTGGGCCTAACACTAAGGTGATGTTACTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS CCA 72 bp | ACAGGCACCAGGCAGAAGACTTATCACCTGGGTGCTTaGTCAGAGATATGTTACAATTTCCTCCTGAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: TGTRQKTYHLGA*SEICYNFLLKA Trigger: TGCTTTCAGGAGGAAATTGTAACATATCTCTGACCAAGCACCCAGGTGATAAGTCTTCTGCCTGGTGCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS CAA 72 bp | TTAAGGTCTGGGCCAAGGCAAAACAGTAATGTCACATaGGTGTTGAGCCCCACAATATGTCCCAATCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LRSGPRQNSNVT*VLSPTICPNLP Trigger: AGGGAGATTGGGACATATTGTGGGGCTCAACACCAATGTGACATTACTGTTTTGCCTTGGCCCAGACCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS CAA 72 bp | GCTGATGCTCCCAAAGATATGTCACAATGCTCTCTGTaGTCAATGTCCACACAGGATCTCTCGTCACCTTGT | + |
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Preference number: 6 (lower is better) Translates to: ADAPKDMSQCSL*SMSTQDLSSPC Trigger: ACAAGGTGACGAGAGATCCTGTGTGGACATTGACAACAGAGAGCATTGTGACATATCTTTGGGAGCATCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS CAA 72 bp | GGTGCTGGGTCCAGTGATATGTCACAATCACCCTTTTaGGCAGGTTCCAGTGAAAAGACGAGAGTCATAACA | + |
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Preference number: 6 (lower is better) Translates to: GAGSSDMSQSPF*AGSSEKTRVIT Trigger: TGTTATGACTCTCGTCTTTTCACTGGAACCTGCCAAAAAGGGTGATTGTGACATATCACTGGACCCAGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000596203.1 ENST00000596718.5 ENST00000599078.1 |
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| CDS CAA 72 bp | GGTGCTGGGTCCAGCAATATGTCACAATCACCCTTTTaGGCAGGTTCCAGTCAAAAGACAAGTCACAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: GAGSSNMSQSPF*AGSSQKTSHKV Trigger: CACTTTGTGACTTGTCTTTTGACTGGAACCTGCCAAAAAGGGTGATTGTGACATATTGCTGGACCCAGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596203.1 ENST00000596718.5 |
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| CDS TCA 72 bp | ATTTCTGGGCCAGAAGATACATCACGGTCTCCCCTATaGGCAAAGCCTTGGTATAAAAGGAGAGTCACATCA | + |
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Preference number: 6 (lower is better) Translates to: ISGPEDTSRSPL*AKPWYKRRVTS Trigger: TGATGTGACTCTCCTTTTATACCAAGGCTTTGCTCATAGGGGAGACCGTGATGTATCTTCTGGCCCAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS CCA 72 bp | AGTGCTCAGCCAGGGATATGTTACAATTCTGGTGTCTaGTTCCAAGGATATGTCACAATCATTCCTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SAQPGICYNSGV*FQGYVTIIPVQ Trigger: CTGCACAGGAATGATTGTGACATATCCTTGGAACCAGACACCAGAATTGTAACATATCCCTGGCTGAGCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596718.5 |
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| CDS CCA 72 bp | TCACCTGAGTGCTCAGCCAGGGATATGTTACAATTCTaGTGTCTGGTTCCAAGGATATGTCACAATCATTCC | + |
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Preference number: 6 (lower is better) Translates to: SPECSARDMLQF*CLVPRICHNHS Trigger: GGAATGATTGTGACATATCCTTGGAACCAGACACCAGAATTGTAACATATCCCTGGCTGAGCACTCAGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596718.5 |
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| CDS TCA 72 bp | GAGAGGAGAGTCACCTCTTCTAGGTTCTTGACAGAGTaGTATGTCACAATCCCTTTTTGGGTAGAGACCAAA | + |
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Preference number: 6 (lower is better) Translates to: ERRVTSSRFLTE*YVTIPFWVETK Trigger: TTTGGTCTCTACCCAAAAAGGGATTGTGACATATCACTCTGTCAAGAACCTAGAAGAGGTGACTCTCCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000596718.5 |
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| CDS GCA 72 bp | CATCAAATAGCTGATGCTCCCAAAGATATGTCACAATaGTCTCTGTTGTCAATGTCCACACAGGATCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: HQIADAPKDMSQ*SLLSMSTQDLS Trigger: CGAGAGATCCTGTGTGGACATTGACAACAGAGAGCATTGTGACATATCTTTGGGAGCATCAGCTATTTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS GCA 72 bp | GAGATTATCAATCCAATGTTCAAGGTCTTGAAGTCTTaGGTCAGTGTAGGTGGCAGGCAGATTCAATCTCTG | + |
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Preference number: 6 (lower is better) Translates to: EIINPMFKVLKS*VSVGGRQIQSL Trigger: CAGAGATTGAATCTGCCTGCCACCTACACTGACGCAAGACTTCAAGACCTTGAACATTGGATTGATAATCTC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599078.1 |
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| CDS CAA 72 bp | CTAAGTTGTGAGATTATCAATCCAATGTTCAAGGTCTaGAAGTCTTGCGTCAGTGTAGGTGGCAGGCAGATT | + |
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Preference number: 6 (lower is better) Translates to: LSCEIINPMFKV*KSCVSVGGRQI Trigger: AATCTGCCTGCCACCTACACTGACGCAAGACTTCAAGACCTTGAACATTGGATTGATAATCTCACAACTTAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599078.1 |
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| CDS CCA 72 bp | TTTGTCAGTATGAGTGTCATTATCACAACTGTGAGCTaGGCTAAAGTATATGTCACAATCCAACCTGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: FVSMSVIITTVS*AKVYVTIQPGL Trigger: AAGCCCAGGTTGGATTGTGACATATACTTTAGCCCAGCTCACAGTTGTGATAATGACACTCATACTGACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS CCA 72 bp | CAACTGCATCTCTGTAATACCGGCTGTAGTTCTCCATaGGCAACTATTAGCAACTGCACAGATATCTATTTA | + |
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Preference number: 6 (lower is better) Translates to: QLHLCNTGCSSP*ATISNCTDIYL Trigger: TAAATAGATATCTGTGCAGTTGCTAATAGTTGCCCATGGAGAACTACAGCCGGTATTACAGAGATGCAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599078.1 |
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| CDS TCA 72 bp | AAGCCTTGGTATAAAAGGAGAGTCACATCAAATAGCTaGTGCTCCCAAAGATATGTCACAATGCTCTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: KPWYKRRVTSNS*CSQRYVTMLSV Trigger: AACAGAGAGCATTGTGACATATCTTTGGGAGCATCAGCTATTTGATGTGACTCTCCTTTTATACCAAGGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596718.5 ENST00000599078.1 |
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| CDS GCA 72 bp | TACATTCAAACGTTTACATCTTTTGAGAGAATACAGTaGAGTAGGAAGATTACCATTTTGACTATCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: YIQTFTSFERIQ*SRKITILTIRR Trigger: CCTCCTGATAGTCAAAATGGTAATCTTCCTACTGCACTGTATTCTCTCAAAAGATGTAAACGTTTGAATGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000599078.1 |
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