Pregenerated sensors for LINC00659 (Homo sapiens)
Ensembl gene IDs: ENSG00000228705Ensembl transcript IDs: ENST00000412500.2, ENST00000653007.1, ENST00000655940.1, ENST00000657741.1, ENST00000658688.1, ENST00000658884.1, ENST00000667589.1, ENST00000667978.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCCAGGAAGCAGCCTCAGCTGGGGGTCACAGGCCAACTGGGCAGTaGCCTTGGCCACACCTGTGGAAGGAGGACAGAGGAGGGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: AQEAASAGGHRPTGQ*PWPHLWKEDRGGQG Trigger: GCCCTGCCCTCCTCTGTCCTCCTTCCACAGGTGTGGCCAAGGGCACTGCCCAGTTGGCCTGTGACCCCCAGCTGAGGCTGCTTCCTGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS CCA 90 bp | GAGCACGGCTCACACGCCACCGCCCTGCTGGCTCTGTCAGCCGCATaGTCCTCCGCGACACCTGGGGCTCTCCCTCCTTCCTTTGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: EHGSHATALLALSAA*SSATPGALPPSFVC Trigger: GCACACAAAGGAAGGAGGGAGAGCCCCAGGTGTCGCGGAGGACCATGCGGCTGACAGAGCCAGCAGGGCGGTGGCGTGTGAGCCGTGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000412500.2 ENST00000653007.1 ENST00000655940.1 ENST00000657741.1 ENST00000658688.1 ENST00000658884.1 ENST00000667589.1 ENST00000667978.1 |
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| CDS GCA 90 bp | GCAGAGGGCAGCGCCCGGGCGAAGGGGACTTTCGCCCTTGCTTCATaGAGCCCTGGCACCCGCAGCAGGGTAAGACGAGATCCCAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: AEGSARAKGTFALAS*SPGTRSRVRRDPRG Trigger: TCCTCTGGGATCTCGTCTTACCCTGCTGCGGGTGCCAGGGCTGCATGAAGCAAGGGCGAAAGTCCCCTTCGCCCGGGCGCTGCCCTCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS GCA 90 bp | ACAGCAGGCAGAGGGCAGCGCCCGGGCGAAGGGGACTTTCGCCCTTaGTTCATGCAGCCCTGGCACCCGCAGCAGGGTAAGACGAGATCC | + |
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Preference number: 5 (lower is better) Translates to: TAGRGQRPGEGDFRP*FMQPWHPQQGKTRS Trigger: GGATCTCGTCTTACCCTGCTGCGGGTGCCAGGGCTGCATGAAGCAAGGGCGAAAGTCCCCTTCGCCCGGGCGCTGCCCTCTGCCTGCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS CCA 90 bp | GAAGCAGCCTCAGCTGGGGGTCACAGGCCAACTGGGCAGTGCCCTTaGCCACACCTGTGGAAGGAGGACAGAGGAGGGCAGGGCGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: EAASAGGHRPTGQCP*PHLWKEDRGGQGGG Trigger: TCCTCCGCCCTGCCCTCCTCTGTCCTCCTTCCACAGGTGTGGCCAAGGGCACTGCCCAGTTGGCCTGTGACCCCCAGCTGAGGCTGCTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS CCA 90 bp | GTCAGCTGCCCAGGAAGCAGCCTCAGCTGGGGGTCACAGGCCAACTaGGCAGTGCCCTTGGCCACACCTGTGGAAGGAGGACAGAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: VSCPGSSLSWGSQAN*AVPLATPVEGGQRR Trigger: CCTCCTCTGTCCTCCTTCCACAGGTGTGGCCAAGGGCACTGCCCAGTTGGCCTGTGACCCCCAGCTGAGGCTGCTTCCTGGGCAGCTGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS TCA 90 bp | AAGGCACCAGCCGCTCGGGGGCCTGGAGAGCTCAGGTCACAAACTTaGAGTCAGCTGCCCAGGAAGCAGCCTCAGCTGGGGGTCACAGGC | + |
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Preference number: 5 (lower is better) Translates to: KAPAARGPGELRSQT*SQLPRKQPQLGVTG Trigger: GCCTGTGACCCCCAGCTGAGGCTGCTTCCTGGGCAGCTGACTTCAAGTTTGTGACCTGAGCTCTCCAGGCCCCCGAGCGGCTGGTGCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS GCA 90 bp | CCGCTCGGGGGCCTGGAGAGCTCAGGTCACAAACTTGAAGTCAGCTaGCCAGGAAGCAGCCTCAGCTGGGGGTCACAGGCCAACTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: PLGGLESSGHKLEVS*PGSSLSWGSQANWA Trigger: TGCCCAGTTGGCCTGTGACCCCCAGCTGAGGCTGCTTCCTGGGCAGCTGACTTCAAGTTTGTGACCTGAGCTCTCCAGGCCCCCGAGCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS CCA 90 bp | CAGCGCCCGGGCGAAGGGGACTTTCGCCCTTGCTTCATGCAGCCCTaGCACCCGCAGCAGGGTAAGACGAGATCCCAGAGGAGGAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: QRPGEGDFRPCFMQP*HPQQGKTRSQRRSL Trigger: AAGACTCCTCCTCTGGGATCTCGTCTTACCCTGCTGCGGGTGCCAGGGCTGCATGAAGCAAGGGCGAAAGTCCCCTTCGCCCGGGCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS GCA 90 bp | GTCAGATCCTTATATATCCAGAGCACGGCTCACACGCCACCGCCCTaGTGGCTCTGTCAGCCGCATGGTCCTCCGCGACACCTGGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: VRSLYIQSTAHTPPP*WLCQPHGPPRHLGL Trigger: GAGCCCCAGGTGTCGCGGAGGACCATGCGGCTGACAGAGCCAGCAGGGCGGTGGCGTGTGAGCCGTGCTCTGGATATATAAGGATCTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000412500.2 ENST00000653007.1 ENST00000655940.1 ENST00000657741.1 ENST00000658688.1 ENST00000658884.1 ENST00000667589.1 ENST00000667978.1 |
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| CDS CCA 90 bp | AGATCCTTATATATCCAGAGCACGGCTCACACGCCACCGCCCTGCTaGCTCTGTCAGCCGCATGGTCCTCCGCGACACCTGGGGCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RSLYIQSTAHTPPPC*LCQPHGPPRHLGLS Trigger: GGAGAGCCCCAGGTGTCGCGGAGGACCATGCGGCTGACAGAGCCAGCAGGGCGGTGGCGTGTGAGCCGTGCTCTGGATATATAAGGATCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000412500.2 ENST00000653007.1 ENST00000655940.1 ENST00000657741.1 ENST00000658688.1 ENST00000658884.1 ENST00000667589.1 ENST00000667978.1 |
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| CDS CCA 90 bp | TTGGCCGCAGAACTGCAGGGCCAAGGCACCAGCCGCTCGGGGGCCTaGAGAGCTCAGGTCACAAACTTGAAGTCAGCTGCCCAGGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: LAAELQGQGTSRSGA*RAQVTNLKSAAQEA Trigger: TGCTTCCTGGGCAGCTGACTTCAAGTTTGTGACCTGAGCTCTCCAGGCCCCCGAGCGGCTGGTGCCTTGGCCCTGCAGTTCTGCGGCCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS CCA 90 bp | CACCGCCCTGCTGGCTCTGTCAGCCGCATGGTCCTCCGCGACACCTaGGGCTCTCCCTCCTTCCTTTGTGTGCACAACCTCAAAGCCATT | + |
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Preference number: 5 (lower is better) Translates to: HRPAGSVSRMVLRDT*GSPSFLCVHNLKAI Trigger: AATGGCTTTGAGGTTGTGCACACAAAGGAAGGAGGGAGAGCCCCAGGTGTCGCGGAGGACCATGCGGCTGACAGAGCCAGCAGGGCGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412500.2 ENST00000653007.1 ENST00000655940.1 ENST00000657741.1 ENST00000658688.1 ENST00000658884.1 ENST00000667589.1 ENST00000667978.1 |
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| CDS TCA 90 bp | AGGAGGGAGGTGCTGGGCTGCAATGTCACCTCTACAGACCTCGGCTaGTCCCAAGGGGGTCCACAGTGGATATGGTCCTTCAGGGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: RREVLGCNVTSTDLG*SQGGPQWIWSFRGA Trigger: GGCACCCCTGAAGGACCATATCCACTGTGGACCCCCTTGGGATCAGCCGAGGTCTGTAGAGGTGACATTGCAGCCCAGCACCTCCCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS CCA 90 bp | TCAGGTCACAAACTTGAAGTCAGCTGCCCAGGAAGCAGCCTCAGCTaGGGGTCACAGGCCAACTGGGCAGTGCCCTTGGCCACACCTGTG | + |
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Preference number: 5 (lower is better) Translates to: SGHKLEVSCPGSSLS*GSQANWAVPLATPV Trigger: CACAGGTGTGGCCAAGGGCACTGCCCAGTTGGCCTGTGACCCCCAGCTGAGGCTGCTTCCTGGGCAGCTGACTTCAAGTTTGTGACCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS CCA 90 bp | GGCCGGCATCGGCTGCAGCTCTCTGTGTGTGGAGACATCTCATTCTaGTGTCTTCTTTACACAGGTCAGCGCTCACAGGCTCGGCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: GRHRLQLSVCGDISF*CLLYTGQRSQARLC Trigger: ACACAGCCGAGCCTGTGAGCGCTGACCTGTGTAAAGAAGACACCAGAATGAGATGTCTCCACACACAGAGAGCTGCAGCCGATGCCGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412500.2 ENST00000653007.1 ENST00000655940.1 ENST00000657741.1 ENST00000658688.1 ENST00000658884.1 ENST00000667589.1 ENST00000667978.1 |
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| CDS CCA 90 bp | CAAGTCCCAAGTCACCGGCCGGCATCGGCTGCAGCTCTCTGTGTGTaGAGACATCTCATTCTGGTGTCTTCTTTACACAGGTCAGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: QVPSHRPASAAALCV*RHLILVSSLHRSAL Trigger: GAGCGCTGACCTGTGTAAAGAAGACACCAGAATGAGATGTCTCCACACACAGAGAGCTGCAGCCGATGCCGGCCGGTGACTTGGGACTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412500.2 ENST00000653007.1 ENST00000655940.1 ENST00000657741.1 ENST00000658688.1 ENST00000658884.1 ENST00000667589.1 ENST00000667978.1 |
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| CDS GCA 90 bp | CAGGACTTTATACTGTTCCTCCCACCCCTTCGAGCAGTCACCAACTaGAGCCCAGATGAGGTCAACAGGTACAGAAAGGAGGGGGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: QDFILFLPPLRAVTN*SPDEVNRYRKEGVG Trigger: TCCCACCCCCTCCTTTCTGTACCTGTTGACCTCATCTGGGCTGCAGTTGGTGACTGCTCGAAGGGGTGGGAGGAACAGTATAAAGTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658884.1 ENST00000667589.1 |
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| CDS GCA 90 bp | CCTCCTGTTAAGCATCCAAGTCCCAAGTCACCGGCCGGCATCGGCTaGAGCTCTCTGTGTGTGGAGACATCTCATTCTGGTGTCTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: PPVKHPSPKSPAGIG*SSLCVETSHSGVFF Trigger: AAAGAAGACACCAGAATGAGATGTCTCCACACACAGAGAGCTGCAGCCGATGCCGGCCGGTGACTTGGGACTTGGATGCTTAACAGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412500.2 ENST00000653007.1 ENST00000655940.1 ENST00000657741.1 ENST00000658688.1 ENST00000658884.1 ENST00000667589.1 ENST00000667978.1 |
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| CDS GCA 90 bp | AGGCTCGGCTGTGTCTCAAGACCCAATTCCTTCGAGTCACTGAGATaGCCAAGGACAAGGGCAACAGAGAGTGTGAAAAGCTGTCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: RLGCVSRPNSFESLR*PRTRATESVKSCPW Trigger: CCAGGGACAGCTTTTCACACTCTCTGTTGCCCTTGTCCTTGGGCATCTCAGTGACTCGAAGGAATTGGGTCTTGAGACACAGCCGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658688.1 |
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| CDS GCA 90 bp | AGGCTCGGCTGTGTCTCAAGACCCAATTCCTTCGAGTCACTGAGATaGCCAAGGACAAGGGCAACAGAGAGTGTGAAAAGAGTGGTCCGG | + |
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Preference number: 5 (lower is better) Translates to: RLGCVSRPNSFESLR*PRTRATESVKRVVR Trigger: CCGGACCACTCTTTTCACACTCTCTGTTGCCCTTGTCCTTGGGCATCTCAGTGACTCGAAGGAATTGGGTCTTGAGACACAGCCGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667589.1 |
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| CDS GCA 90 bp | GTGATGATAGCAGCCGACAGATGGGCGAGCATAGAGCTCAGACATTaGCAGCAGCGTCAGATCCTTATATATCCAGAGCACGGCTCACAC | + |
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Preference number: 5 (lower is better) Translates to: VMIAADRWASIELRH*QQRQILIYPEHGSH Trigger: GTGTGAGCCGTGCTCTGGATATATAAGGATCTGACGCTGCTGGCAATGTCTGAGCTCTATGCTCGCCCATCTGTCGGCTGCTATCATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412500.2 ENST00000653007.1 ENST00000655940.1 ENST00000657741.1 ENST00000658688.1 ENST00000658884.1 ENST00000667589.1 ENST00000667978.1 |
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| CDS GCA 90 bp | AGGCTCGGCTGTGTCTCAAGACCCAATTCCTTCGAGTCACTGAGATaGCCAAGGACAAGGGCAACAGAGAGTGTGAAAAGCTGGAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: RLGCVSRPNSFESLR*PRTRATESVKSWSR Trigger: TCTACTCCAGCTTTTCACACTCTCTGTTGCCCTTGTCCTTGGGCATCTCAGTGACTCGAAGGAATTGGGTCTTGAGACACAGCCGAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412500.2 |
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| CDS GCA 90 bp | AGGCTCGGCTGTGTCTCAAGACCCAATTCCTTCGAGTCACTGAGATaGCCAAGGACAAGGGCAACAGAGAGTGTGAAAAGCTCTACAGAC | + |
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Preference number: 5 (lower is better) Translates to: RLGCVSRPNSFESLR*PRTRATESVKSSTD Trigger: GTCTGTAGAGCTTTTCACACTCTCTGTTGCCCTTGTCCTTGGGCATCTCAGTGACTCGAAGGAATTGGGTCTTGAGACACAGCCGAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657741.1 |
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| CDS CCA 90 bp | GCAACAGAGAGTGTGAAAAGAGTGGTCCGGGCTGGGGTTCCTTCTTaGTTGCATTTCCAGCTGTGTTCTTTCCTTCACTTTCTCACTCTC | + |
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Preference number: 5 (lower is better) Translates to: ATESVKRVVRAGVPS*LHFQLCSFLHFLTL Trigger: GAGAGTGAGAAAGTGAAGGAAAGAACACAGCTGGAAATGCAACCAAGAAGGAACCCCAGCCCGGACCACTCTTTTCACACTCTCTGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667589.1 |
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| CDS CAA 90 bp | GGAAGCAGCCTCAGCTGGGGGTCACAGGCCAACTGGGCAGTGCCCTaGGCCACACCTGTGGAAGGAGGACAGAGGAGGGCAGGGCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GSSLSWGSQANWAVP*ATPVEGGQRRAGRR Trigger: CCTCCGCCCTGCCCTCCTCTGTCCTCCTTCCACAGGTGTGGCCAAGGGCACTGCCCAGTTGGCCTGTGACCCCCAGCTGAGGCTGCTTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS GCA 72 bp | AGAGGGCAGCGCCCGGGCGAAGGGGACTTTCGCCCTTaGTTCATGCAGCCCTGGCACCCGCAGCAGGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: RGQRPGEGDFRP*FMQPWHPQQGK Trigger: CTTACCCTGCTGCGGGTGCCAGGGCTGCATGAAGCAAGGGCGAAAGTCCCCTTCGCCCGGGCGCTGCCCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS CCA 72 bp | TCTCCCTTGCCTCAGGGTCTGCATCTGGGGGTCCACTaGGGAGGACTCAGCCTCTCCCGCGTCCTCCATCCC | + |
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Preference number: 6 (lower is better) Translates to: SPLPQGLHLGVH*GGLSLSRVLHP Trigger: GGGATGGAGGACGCGGGAGAGGCTGAGTCCTCCCCAGTGGACCCCCAGATGCAGACCCTGAGGCAAGGGAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667589.1 |
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| CDS GCA 72 bp | GCAGCCTCAGCTGGGGGTCACAGGCCAACTGGGCAGTaGCCTTGGCCACACCTGTGGAAGGAGGACAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: AASAGGHRPTGQ*PWPHLWKEDRG Trigger: TCCTCTGTCCTCCTTCCACAGGTGTGGCCAAGGGCACTGCCCAGTTGGCCTGTGACCCCCAGCTGAGGCTGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS GCA 72 bp | AGCGCCCGGGCGAAGGGGACTTTCGCCCTTGCTTCATaGAGCCCTGGCACCCGCAGCAGGGTAAGACGAGAT | + |
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Preference number: 6 (lower is better) Translates to: SARAKGTFALAS*SPGTRSRVRRD Trigger: ATCTCGTCTTACCCTGCTGCGGGTGCCAGGGCTGCATGAAGCAAGGGCGAAAGTCCCCTTCGCCCGGGCGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS CCA 72 bp | TATATCCAGAGCACGGCTCACACGCCACCGCCCTGCTaGCTCTGTCAGCCGCATGGTCCTCCGCGACACCTG | + |
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Preference number: 6 (lower is better) Translates to: YIQSTAHTPPPC*LCQPHGPPRHL Trigger: CAGGTGTCGCGGAGGACCATGCGGCTGACAGAGCCAGCAGGGCGGTGGCGTGTGAGCCGTGCTCTGGATATA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412500.2 ENST00000653007.1 ENST00000655940.1 ENST00000657741.1 ENST00000658688.1 ENST00000658884.1 ENST00000667589.1 ENST00000667978.1 |
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| CDS CCA 72 bp | TCAGCTGGGGGTCACAGGCCAACTGGGCAGTGCCCTTaGCCACACCTGTGGAAGGAGGACAGAGGAGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SAGGHRPTGQCP*PHLWKEDRGGQ Trigger: CTGCCCTCCTCTGTCCTCCTTCCACAGGTGTGGCCAAGGGCACTGCCCAGTTGGCCTGTGACCCCCAGCTGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS CCA 72 bp | CCAGGAAGCAGCCTCAGCTGGGGGTCACAGGCCAACTaGGCAGTGCCCTTGGCCACACCTGTGGAAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: PGSSLSWGSQAN*AVPLATPVEGG Trigger: TCCTCCTTCCACAGGTGTGGCCAAGGGCACTGCCCAGTTGGCCTGTGACCCCCAGCTGAGGCTGCTTCCTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS CCA 72 bp | GAACTGCAGGGCCAAGGCACCAGCCGCTCGGGGGCCTaGAGAGCTCAGGTCACAAACTTGAAGTCAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: ELQGQGTSRSGA*RAQVTNLKSAA Trigger: GGCAGCTGACTTCAAGTTTGTGACCTGAGCTCTCCAGGCCCCCGAGCGGCTGGTGCCTTGGCCCTGCAGTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS CCA 72 bp | GGCGAAGGGGACTTTCGCCCTTGCTTCATGCAGCCCTaGCACCCGCAGCAGGGTAAGACGAGATCCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: GEGDFRPCFMQP*HPQQGKTRSQR Trigger: CCTCTGGGATCTCGTCTTACCCTGCTGCGGGTGCCAGGGCTGCATGAAGCAAGGGCGAAAGTCCCCTTCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS GCA 72 bp | TTATATATCCAGAGCACGGCTCACACGCCACCGCCCTaGTGGCTCTGTCAGCCGCATGGTCCTCCGCGACAC | + |
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Preference number: 6 (lower is better) Translates to: LYIQSTAHTPPP*WLCQPHGPPRH Trigger: GTGTCGCGGAGGACCATGCGGCTGACAGAGCCAGCAGGGCGGTGGCGTGTGAGCCGTGCTCTGGATATATAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412500.2 ENST00000653007.1 ENST00000655940.1 ENST00000657741.1 ENST00000658688.1 ENST00000658884.1 ENST00000667589.1 ENST00000667978.1 |
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| CDS CCA 72 bp | AAACTTGAAGTCAGCTGCCCAGGAAGCAGCCTCAGCTaGGGGTCACAGGCCAACTGGGCAGTGCCCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: KLEVSCPGSSLS*GSQANWAVPLA Trigger: GGCCAAGGGCACTGCCCAGTTGGCCTGTGACCCCCAGCTGAGGCTGCTTCCTGGGCAGCTGACTTCAAGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS TCA 72 bp | GTGCTGGGCTGCAATGTCACCTCTACAGACCTCGGCTaGTCCCAAGGGGGTCCACAGTGGATATGGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: VLGCNVTSTDLG*SQGGPQWIWSF Trigger: GAAGGACCATATCCACTGTGGACCCCCTTGGGATCAGCCGAGGTCTGTAGAGGTGACATTGCAGCCCAGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658688.1 ENST00000667589.1 |
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| CDS GCA 72 bp | AAGCATCCAAGTCCCAAGTCACCGGCCGGCATCGGCTaGAGCTCTCTGTGTGTGGAGACATCTCATTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: KHPSPKSPAGIG*SSLCVETSHSG Trigger: ACCAGAATGAGATGTCTCCACACACAGAGAGCTGCAGCCGATGCCGGCCGGTGACTTGGGACTTGGATGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412500.2 ENST00000653007.1 ENST00000655940.1 ENST00000657741.1 ENST00000658688.1 ENST00000658884.1 ENST00000667589.1 ENST00000667978.1 |
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| CDS CCA 72 bp | AGTCACCGGCCGGCATCGGCTGCAGCTCTCTGTGTGTaGAGACATCTCATTCTGGTGTCTTCTTTACACAGG | + |
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Preference number: 6 (lower is better) Translates to: SHRPASAAALCV*RHLILVSSLHR Trigger: CCTGTGTAAAGAAGACACCAGAATGAGATGTCTCCACACACAGAGAGCTGCAGCCGATGCCGGCCGGTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412500.2 ENST00000653007.1 ENST00000655940.1 ENST00000657741.1 ENST00000658688.1 ENST00000658884.1 ENST00000667589.1 ENST00000667978.1 |
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| CDS TCA 72 bp | GCAACAGAGAGTGTGAAAAGCTCTACAGACCTCGGCTaGTCCCAAGGGGGTCCACAGTGGATATGGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: ATESVKSSTDLG*SQGGPQWIWSF Trigger: GAAGGACCATATCCACTGTGGACCCCCTTGGGATCAGCCGAGGTCTGTAGAGCTTTTCACACTCTCTGTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657741.1 |
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| CDS GCA 72 bp | GCAGCCGACAGATGGGCGAGCATAGAGCTCAGACATTaGCAGCAGCGTCAGATCCTTATATATCCAGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: AADRWASIELRH*QQRQILIYPEH Trigger: GTGCTCTGGATATATAAGGATCTGACGCTGCTGGCAATGTCTGAGCTCTATGCTCGCCCATCTGTCGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412500.2 ENST00000653007.1 ENST00000655940.1 ENST00000657741.1 ENST00000658688.1 ENST00000658884.1 ENST00000667589.1 ENST00000667978.1 |
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| CDS GCA 72 bp | ATACTGTTCCTCCCACCCCTTCGAGCAGTCACCAACTaGAGCCCAGATGAGGTCAACAGGTACAGAAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: ILFLPPLRAVTN*SPDEVNRYRKE Trigger: CTCCTTTCTGTACCTGTTGACCTCATCTGGGCTGCAGTTGGTGACTGCTCGAAGGGGTGGGAGGAACAGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655940.1 ENST00000658884.1 ENST00000667589.1 |
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| CDS CCA 72 bp | TGCCCAAGGACAAGGGCAACAGAGAGTGTGAAAAGCTaGAGTAGACAGGACAGAAAACAGGGTGCAGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: CPRTRATESVKS*SRQDRKQGAAS Trigger: GGACGCTGCACCCTGTTTTCTGTCCTGTCTACTCCAGCTTTTCACACTCTCTGTTGCCCTTGTCCTTGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412500.2 |
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| CDS CAA 90 bp | GGTGATGATAGCAGCCGACAGATGGGCGAGCATAGAGCTCAGACATaGCCAGCAGCGTCAGATCCTTATATATCCAGAGCACGGCTCACA | + |
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Preference number: 6 (lower is better) Translates to: GDDSSRQMGEHRAQT*PAASDPYISRARLT Trigger: TGTGAGCCGTGCTCTGGATATATAAGGATCTGACGCTGCTGGCAATGTCTGAGCTCTATGCTCGCCCATCTGTCGGCTGCTATCATCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412500.2 ENST00000653007.1 ENST00000655940.1 ENST00000657741.1 ENST00000658688.1 ENST00000658884.1 ENST00000667589.1 ENST00000667978.1 |
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| CDS CCA 72 bp | AAGGGCAACAGAGAGTGTGAAAAGAGTGGTCCGGGCTaGGGTTCCTTCTTGGTTGCATTTCCAGCTGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: KGNRECEKSGPG*GSFLVAFPAVF Trigger: GAACACAGCTGGAAATGCAACCAAGAAGGAACCCCAGCCCGGACCACTCTTTTCACACTCTCTGTTGCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667589.1 |
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| CDS CAA 72 bp | AGCAGCCGACAGATGGGCGAGCATAGAGCTCAGACATaGCCAGCAGCGTCAGATCCTTATATATCCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: SSRQMGEHRAQT*PAASDPYISRA Trigger: TGCTCTGGATATATAAGGATCTGACGCTGCTGGCAATGTCTGAGCTCTATGCTCGCCCATCTGTCGGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412500.2 ENST00000653007.1 ENST00000655940.1 ENST00000657741.1 ENST00000658688.1 ENST00000658884.1 ENST00000667589.1 ENST00000667978.1 |
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| CDS CCA 72 bp | AGTGTGAAAAGAGTGGTCCGGGCTGGGGTTCCTTCTTaGTTGCATTTCCAGCTGTGTTCTTTCCTTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: SVKRVVRAGVPS*LHFQLCSFLHF Trigger: AAAGTGAAGGAAAGAACACAGCTGGAAATGCAACCAAGAAGGAACCCCAGCCCGGACCACTCTTTTCACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667589.1 |
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