Pregenerated sensors for LINC00654 (Homo sapiens)
Ensembl gene IDs: ENSG00000205181Ensembl transcript IDs: ENST00000379053.4, ENST00000589201.2, ENST00000650928.1, ENST00000660858.1, ENST00000661996.1, ENST00000663299.1, ENST00000664106.1, ENST00000665765.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCTGCTGTTTCCTTCAGCCCCGCCAGTTGCATCTGCTGTTCCCACTaGAGGTTAGTGGACAGGGTGGAGGTGGCTTCTCTCCTCCTTTCG | + |
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Preference number: 5 (lower is better) Translates to: PAVSFSPASCICCSH*RLVDRVEVASLLLS Trigger: CGAAAGGAGGAGAGAAGCCACCTCCACCCTGTCCACTAACCTTCAGTGGGAACAGCAGATGCAACTGGCGGGGCTGAAGGAAACAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650928.1 ENST00000661996.1 |
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| CDS GCA 90 bp | CACCTCATTCCACCCTCAAAACAGAGGGTCCAGGAGGACAAGGACTaGCAAGGTGCTAAGAAGTTCTGTCACCCAATGTTGCTCCGGGCA | + |
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Preference number: 5 (lower is better) Translates to: HLIPPSKQRVQEDKD*QGAKKFCHPMLLRA Trigger: TGCCCGGAGCAACATTGGGTGACAGAACTTCTTAGCACCTTGGCAGTCCTTGTCCTCCTGGACCCTCTGTTTTGAGGGTGGAATGAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379053.4 ENST00000664106.1 |
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| CDS GCA 90 bp | GCCTTTAGGGAGTCTTTGAAACAGCCAGCAAATAAGTTCTGGGCGTaGCAGCAGCAAGTTGGCCTTAGCACCCCCACCACACTCGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: AFRESLKQPANKFWA*QQQVGLSTPTTLGH Trigger: ATGACCGAGTGTGGTGGGGGTGCTAAGGCCAACTTGCTGCTGGCACGCCCAGAACTTATTTGCTGGCTGTTTCAAAGACTCCCTAAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS GCA 90 bp | CTCATAAACAGGATCTCAAAGATTCTCCCCTCCTCATCCATCAGATaGCCCAGGCTGGAGGGTGGCCCCAGAAGAACACTTTCTAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: LINRISKILPSSSIR*PRLEGGPRRTLSSP Trigger: GGGGCTAGAAAGTGTTCTTCTGGGGCCACCCTCCAGCCTGGGGCATCTGATGGATGAGGAGGGGAGAATCTTTGAGATCCTGTTTATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS CCA 90 bp | CATGGTGCCTTTAGGGAGTCTTTGAAACAGCCAGCAAATAAGTTCTaGGCGTGCCAGCAGCAAGTTGGCCTTAGCACCCCCACCACACTC | + |
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Preference number: 5 (lower is better) Translates to: HGAFRESLKQPANKF*ACQQQVGLSTPTTL Trigger: GAGTGTGGTGGGGGTGCTAAGGCCAACTTGCTGCTGGCACGCCCAGAACTTATTTGCTGGCTGTTTCAAAGACTCCCTAAAGGCACCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS TCA 90 bp | CAGAAGGCAGTAGAGGGAGGGGGCCTGCTCAGAAGCTCAAGCATCTaGTCCTCCATTACAAAACACCTGCTAGTGCTGCATAGCTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: QKAVEGGGLLRSSSI*SSITKHLLVLHSWD Trigger: ATCCCAGCTATGCAGCACTAGCAGGTGTTTTGTAATGGAGGATCAGATGCTTGAGCTTCTGAGCAGGCCCCCTCCCTCTACTGCCTTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS TCA 90 bp | CTGAGTCACAAGGACCTTCTCCAGTGCTATCTCCCTCTCCCAGAGTaGTGGCCACCCACTCTGTTACCTGAGCTTTGTATGATTGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LSHKDLLQCYLPLPE*WPPTLLPELCMIAS Trigger: TGAAGCAATCATACAAAGCTCAGGTAACAGAGTGGGTGGCCATCACTCTGGGAGAGGGAGATAGCACTGGAGAAGGTCCTTGTGACTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS TCA 90 bp | ACAAAACACCTGCTAGTGCTGCATAGCTGGGATTTCCATGACGACTaGAGACAAGACTGCCACCTTGTCTACTCCTGCCATGGCCACAGT | + |
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Preference number: 5 (lower is better) Translates to: TKHLLVLHSWDFHDD*RQDCHLVYSCHGHS Trigger: ACTGTGGCCATGGCAGGAGTAGACAAGGTGGCAGTCTTGTCTTCAGTCGTCATGGAAATCCCAGCTATGCAGCACTAGCAGGTGTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS TCA 90 bp | GAAGATAGGGGCTGTGGTGAGAACAGAACTTCCTTTGCTGCGACATaGACTGCTTCCTCAGATGATGGCTGGATTCTGCATAGGTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: EDRGCGENRTSFAAT*TASSDDGWILHRFS Trigger: GCTGAACCTATGCAGAATCCAGCCATCATCTGAGGAAGCAGTTCATGTCGCAGCAAAGGAAGTTCTGTTCTCACCACAGCCCCTATCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661996.1 |
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| CDS GCA 90 bp | ATCTTATTAAGGAGAGAAAAGAGGCACAAAGAAGCTGGTCGAACTTaGCCAAGATCACACAGCCAGCCCAAGGCCCAGCTTGCTTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: ILLRREKRHKEAGRT*PRSHSQPKAQLALS Trigger: GCTCAAAGCAAGCTGGGCCTTGGGCTGGCTGTGTGATCTTGGGCAAGTTCGACCAGCTTCTTTGTGCCTCTTTTCTCTCCTTAATAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000379053.4 ENST00000589201.2 ENST00000664106.1 ENST00000665765.1 |
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| CDS TCA 90 bp | GAGAGAATGAAGCAGAAGTTGCACCCCAGGCAAATAAATATTTGGTaGGAAAAGCTTCTAATATCATCTCCAGGAAGATCTGGTCATAAA | + |
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Preference number: 5 (lower is better) Translates to: ERMKQKLHPRQINIW*EKLLISSPGRSGHK Trigger: TTTATGACCAGATCTTCCTGGAGATGATATTAGAAGCTTTTCTCACCAAATATTTATTTGCCTGGGGTGCAACTTCTGCTTCATTCTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379053.4 ENST00000664106.1 |
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| CDS TCA 72 bp | GCTGAGGCAGAAGAATGGCTTGAACCCGGCAGGTGGTaGCTCCCCATCCGCGGAGGCTCCCCCGCTGACCCC | + |
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Preference number: 6 (lower is better) Translates to: AEAEEWLEPGRW*LPIRGGSPADP Trigger: GGGGTCAGCGGGGGAGCCTCCGCGGATGGGGAGTCACCACCTGCCGGGTTCAAGCCATTCTTCTGCCTCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589201.2 |
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| CDS TCA 72 bp | TCCTTCAGCCCCGCCAGTTGCATCTGCTGTTCCCACTaGAGGTTAGTGGACAGGGTGGAGGTGGCTTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SFSPASCICCSH*RLVDRVEVASL Trigger: GAGAGAAGCCACCTCCACCCTGTCCACTAACCTTCAGTGGGAACAGCAGATGCAACTGGCGGGGCTGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650928.1 ENST00000661996.1 |
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| CDS CCA 72 bp | GCAGGGCCCAGCCTTACTAAGAGGTCATGTATGCTCTaGGCAAGGCCAGGCTGGCTCTATGGTCTGCAACTG | + |
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Preference number: 6 (lower is better) Translates to: AGPSLTKRSCML*ARPGWLYGLQL Trigger: CAGTTGCAGACCATAGAGCCAGCCTGGCCTTGCCCAGAGCATACATGACCTCTTAGTAAGGCTGGGCCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS CAA 72 bp | CCATTCCCCTTGGCATTGCTGCCAAGCTCCCAACACTaGAAGGCCCTGAACTCCTTGCTGAACAGCCCTAGT | + |
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Preference number: 6 (lower is better) Translates to: PFPLALLPSSQH*KALNSLLNSPS Trigger: ACTAGGGCTGTTCAGCAAGGAGTTCAGGGCCTTCAAGTGTTGGGAGCTTGGCAGCAATGCCAAGGGGAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS CAA 90 bp | AGAATATGCCCAGTTGGTAGAGCACCTGACCAGCTGGGAAAGCACTaGCCCTTCACCTCATTCCACCCTCAAAACAGAGGGTCCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RICPVGRAPDQLGKH*PFTSFHPQNRGSRR Trigger: CCTCCTGGACCCTCTGTTTTGAGGGTGGAATGAGGTGAAGGGCAAGTGCTTTCCCAGCTGGTCAGGTGCTCTACCAACTGGGCATATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379053.4 ENST00000664106.1 |
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| CDS CAA 90 bp | AATCCACCCCCATTCCCCTTGGCATTGCTGCCAAGCTCCCAACACTaGAAGGCCCTGAACTCCTTGCTGAACAGCCCTAGTCTGACTTCA | + |
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Preference number: 6 (lower is better) Translates to: NPPPFPLALLPSSQH*KALNSLLNSPSLTS Trigger: TGAAGTCAGACTAGGGCTGTTCAGCAAGGAGTTCAGGGCCTTCAAGTGTTGGGAGCTTGGCAGCAATGCCAAGGGGAATGGGGGTGGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS TCA 72 bp | TTCCTTGGGAGTGTCCCTGCCACGGTGTTTGGGCCGTaGTTCAAACAGAGAGATCCCACATTTATGCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: FLGSVPATVFGP*FKQRDPTFMQG Trigger: CCCCTGCATAAATGTGGGATCTCTCTGTTTGAATCACGGCCCAAACACCGTGGCAGGGACACTCCCAAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS GCA 72 bp | AGGAGAGAAAAGAGGCACAAAGAAGCTGGTCGAACTTaGCCAAGATCACACAGCCAGCCCAAGGCCCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: RREKRHKEAGRT*PRSHSQPKAQL Trigger: AAGCTGGGCCTTGGGCTGGCTGTGTGATCTTGGGCAAGTTCGACCAGCTTCTTTGTGCCTCTTTTCTCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000379053.4 ENST00000589201.2 ENST00000664106.1 ENST00000665765.1 |
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| CDS CAA 72 bp | AAGGAGAGAAAAGAGGCACAAAGAAGCTGGTCGAACTaGCCCAAGATCACACAGCCAGCCCAAGGCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: KERKEAQRSWSN*PKITQPAQGPA Trigger: AGCTGGGCCTTGGGCTGGCTGTGTGATCTTGGGCAAGTTCGACCAGCTTCTTTGTGCCTCTTTTCTCTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000379053.4 ENST00000589201.2 ENST00000664106.1 ENST00000665765.1 |
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| CDS GCA 72 bp | CCACCCTCAAAACAGAGGGTCCAGGAGGACAAGGACTaGCAAGGTGCTAAGAAGTTCTGTCACCCAATGTTG | + |
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Preference number: 6 (lower is better) Translates to: PPSKQRVQEDKD*QGAKKFCHPML Trigger: CAACATTGGGTGACAGAACTTCTTAGCACCTTGGCAGTCCTTGTCCTCCTGGACCCTCTGTTTTGAGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379053.4 ENST00000664106.1 |
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| CDS CCA 72 bp | TTTAGGGAGTCTTTGAAACAGCCAGCAAATAAGTTCTaGGCGTGCCAGCAGCAAGTTGGCCTTAGCACCCCC | + |
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Preference number: 6 (lower is better) Translates to: FRESLKQPANKF*ACQQQVGLSTP Trigger: GGGGGTGCTAAGGCCAACTTGCTGCTGGCACGCCCAGAACTTATTTGCTGGCTGTTTCAAAGACTCCCTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS CCA 72 bp | CCTGTTTCTACTAAAATACAAAGAAGTAGCCAGGCGTaGTGGTGGGTGGCTGTAGTCCCAGCTACTCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: PVSTKIQRSSQA*WWVAVVPATRE Trigger: CTCCCGAGTAGCTGGGACTACAGCCACCCACCACCACGCCTGGCTACTTCTTTGTATTTTAGTAGAAACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589201.2 |
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| CDS CAA 72 bp | ACCACTGTTATGACTACAGTGGCCCCCAGTCTAATGTaGCCATCAAGATTGGTAGTCCAGGCCGGGTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: TTVMTTVAPSLM*PSRLVVQAGCG Trigger: ACCACACCCGGCCTGGACTACCAATCTTGATGGCAACATTAGACTGGGGGCCACTGTAGTCATAACAGTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660858.1 |
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| CDS CAA 90 bp | AGCTGCTTCCAGAAGATAGGGGCTGTGGTGAGAACAGAACTTCCTTaGCTGCGACATGAACTGCTTCCTCAGATGATGGCTGGATTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SCFQKIGAVVRTELP*LRHELLPQMMAGFC Trigger: GCAGAATCCAGCCATCATCTGAGGAAGCAGTTCATGTCGCAGCAAAGGAAGTTCTGTTCTCACCACAGCCCCTATCTTCTGGAAGCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661996.1 |
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| CDS TCA 72 bp | CTGCTAGTGCTGCATAGCTGGGATTTCCATGACGACTaGAGACAAGACTGCCACCTTGTCTACTCCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LLVLHSWDFHDD*RQDCHLVYSCH Trigger: ATGGCAGGAGTAGACAAGGTGGCAGTCTTGTCTTCAGTCGTCATGGAAATCCCAGCTATGCAGCACTAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS TCA 72 bp | CGGACTCAAGTACCTGAGGGAAGGGCAGTGAAGTCATaGAGATCCCTTTGTGACACCAACATACCAGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: RTQVPEGRAVKS*RSLCDTNIPGG Trigger: ACCTCCTGGTATGTTGGTGTCACAAAGGGATCTTCATGACTTCACTGCCCTTCCCTCAGGTACTTGAGTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663299.1 |
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| CDS TCA 72 bp | GGCTGTGGTGAGAACAGAACTTCCTTTGCTGCGACATaGACTGCTTCCTCAGATGATGGCTGGATTCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: GCGENRTSFAAT*TASSDDGWILH Trigger: ATGCAGAATCCAGCCATCATCTGAGGAAGCAGTTCATGTCGCAGCAAAGGAAGTTCTGTTCTCACCACAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661996.1 |
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| CDS TCA 72 bp | TCATGGCTGATTGCTGAGGGAAGGGCAGTGAAGTCATaGAGATCCCTTTGTGACACCAACATACCAGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: SWLIAEGRAVKS*RSLCDTNIPGG Trigger: ACCTCCTGGTATGTTGGTGTCACAAAGGGATCTTCATGACTTCACTGCCCTTCCCTCAGCAATCAGCCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665765.1 |
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| CDS CAA 72 bp | CAGAAGATAGGGGCTGTGGTGAGAACAGAACTTCCTTaGCTGCGACATGAACTGCTTCCTCAGATGATGGCT | + |
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Preference number: 6 (lower is better) Translates to: QKIGAVVRTELP*LRHELLPQMMA Trigger: AGCCATCATCTGAGGAAGCAGTTCATGTCGCAGCAAAGGAAGTTCTGTTCTCACCACAGCCCCTATCTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661996.1 |
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| CDS CAA 90 bp | TATCTTATTAAGGAGAGAAAAGAGGCACAAAGAAGCTGGTCGAACTaGCCCAAGATCACACAGCCAGCCCAAGGCCCAGCTTGCTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: YLIKERKEAQRSWSN*PKITQPAQGPACFE Trigger: CTCAAAGCAAGCTGGGCCTTGGGCTGGCTGTGTGATCTTGGGCAAGTTCGACCAGCTTCTTTGTGCCTCTTTTCTCTCCTTAATAAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000379053.4 ENST00000589201.2 ENST00000664106.1 ENST00000665765.1 |
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| CDS CAA 72 bp | GGCCGTGTTACCCAATCTGAGCCTCAGGTTTGTCTCTaGTGCAAACTTAGGACAGGGAATAGAATAGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: GRVTQSEPQVCL*CKLRTGNRIGS Trigger: TGAGCCTATTCTATTCCCTGTCCTAAGTTTGCACAAGAGACAAACCTGAGGCTCAGATTGGGTAACACGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650928.1 ENST00000663299.1 |
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| CDS CCA 72 bp | GGAAACTTCTGTTTTGTTATAACAGGAGTGAGGATGTaGCCTATATGCTGTCTAGAGCTGGCTGCACCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GNFCFVITGVRM*PICCLELAAPA Trigger: AGCAGGTGCAGCCAGCTCTAGACAGCATATAGGCCACATCCTCACTCCTGTTATAACAAAACAGAAGTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS CAA 72 bp | CTTCATCAAGAGATTCTCACTTGGGCATTGGACCCATaGGCCACATCAAACTCTGATCTGTATACTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LHQEILTWALDP*ATSNSDLYTLG Trigger: CCCCAGAGTATACAGATCAGAGTTTGATGTGGCCAATGGGTCCAATGCCCAAGTGAGAATCTCTTGATGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379053.4 ENST00000664106.1 |
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| CDS CAA 90 bp | CAGAACTGTATTCTAAGGAAAATCCATGGTGCCTTTAGGGAGTCTTaGAAACAGCCAGCAAATAAGTTCTGGGCGTGCCAGCAGCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: QNCILRKIHGAFRES*KQPANKFWACQQQV Trigger: AACTTGCTGCTGGCACGCCCAGAACTTATTTGCTGGCTGTTTCAAAGACTCCCTAAAGGCACCATGGATTTTCCTTAGAATACAGTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS GCA 72 bp | TGTTTTGTTATAACAGGAGTGAGGATGTGGCCTATATaGTGTCTAGAGCTGGCTGCACCTGCTGTTCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: CFVITGVRMWPI*CLELAAPAVLL Trigger: CAAAAGAACAGCAGGTGCAGCCAGCTCTAGACAGCATATAGGCCACATCCTCACTCCTGTTATAACAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS GCA 72 bp | CGACATGAACTGCTTCCTCAGATGATGGCTGGATTCTaGATAGGTTCAGCTGTAACCAGGTCTAAGTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: RHELLPQMMAGF*IGSAVTRSKCF Trigger: AAAACACTTAGACCTGGTTACAGCTGAACCTATGCAGAATCCAGCCATCATCTGAGGAAGCAGTTCATGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661996.1 |
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| CDS CAA 72 bp | TTCAAGGGCTTACCACACTCCCAGCTCTGTGTGATATaGACAAGTTCACCCTCTCTGAGCTCCAATTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: FKGLPHSQLCVI*TSSPSLSSNFC Trigger: ACAAAAATTGGAGCTCAGAGAGGGTGAACTTGTCAATATCACACAGAGCTGGGAGTGTGGTAAGCCCTTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS CAA 72 bp | ATTCTAAGGAAAATCCATGGTGCCTTTAGGGAGTCTTaGAAACAGCCAGCAAATAAGTTCTGGGCGTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: ILRKIHGAFRES*KQPANKFWACQ Trigger: CTGGCACGCCCAGAACTTATTTGCTGGCTGTTTCAAAGACTCCCTAAAGGCACCATGGATTTTCCTTAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS CCA 72 bp | ACCAATAACTTCATCAAGAGATTCTCACTTGGGCATTaGACCCATTGGCCACATCAAACTCTGATCTGTATA | + |
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Preference number: 6 (lower is better) Translates to: TNNFIKRFSLGH*THWPHQTLICI Trigger: TATACAGATCAGAGTTTGATGTGGCCAATGGGTCCAATGCCCAAGTGAGAATCTCTTGATGAAGTTATTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379053.4 ENST00000664106.1 |
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| CDS CCA 72 bp | AGGAAGGAACATAACATTGTGAAAATTATGAAGGACTaGGTGAGCCATCAGACCTTAAAGCAAGTATCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RKEHNIVKIMKD*VSHQTLKQVSA Trigger: GGCTGATACTTGCTTTAAGGTCTGATGGCTCACCCAGTCCTTCATAATTTTCACAATGTTATGTTCCTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379053.4 |
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| CDS TCA 72 bp | AAGCAGAAGTTGCACCCCAGGCAAATAAATATTTGGTaGGAAAAGCTTCTAATATCATCTCCAGGAAGATCT | + |
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Preference number: 6 (lower is better) Translates to: KQKLHPRQINIW*EKLLISSPGRS Trigger: AGATCTTCCTGGAGATGATATTAGAAGCTTTTCTCACCAAATATTTATTTGCCTGGGGTGCAACTTCTGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379053.4 ENST00000664106.1 |
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