RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC00649 (Homo sapiens)

Ensembl gene IDs: ENSG00000237945

Ensembl transcript IDs: ENST00000381181.1, ENST00000400353.6, ENST00000427447.5, ENST00000593977.1, ENST00000594370.5, ENST00000594752.5, ENST00000595747.5, ENST00000596365.5, ENST00000597626.5, ENST00000599421.1, ENST00000600155.1, ENST00000601471.1, ENST00000608431.1, ENST00000609132.1, ENST00000613667.1, ENST00000616030.4, ENST00000620580.1, ENST00000622171.1, ENST00000628906.2

Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CGGGTTCATCTCTCTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTaGGTGCGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGC +
Preference number: 5 (lower is better)
Translates to: RVHLSRECQTVGAGQ*VRAPCASRSRARHC
Trigger: GCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCGCACCCACTGACCTGCGCCCACTGTCTGGCACTCCCTAGAGAGATGAACCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427447.5
ENST00000599421.1
CDS CCA 90 bp GGCTGGGGAAGTCTGGCAGTCTTCAAGGTTATGGGACCTGGCGAGTaGGAGCGACTCAGGACGACCCAGCGTTTGTCCCCCGGGATGCCT +
Preference number: 5 (lower is better)
Translates to: GWGSLAVFKVMGPGE*ERLRTTQRLSPGMP
Trigger: AGGCATCCCGGGGGACAAACGCTGGGTCGTCCTGAGTCGCTCCCACTCGCCAGGTCCCATAACCTTGAAGACTGCCAGACTTCCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000596365.5
ENST00000597626.5
ENST00000616030.4
CDS CCA 90 bp ATGCTTCGGCTGGGGAAGTCTGGCAGTCTTCAAGGTTATGGGACCTaGCGAGTGGGAGCGACTCAGGACGACCCAGCGTTTGTCCCCCGG +
Preference number: 5 (lower is better)
Translates to: MLRLGKSGSLQGYGT*RVGATQDDPAFVPR
Trigger: CCGGGGGACAAACGCTGGGTCGTCCTGAGTCGCTCCCACTCGCCAGGTCCCATAACCTTGAAGACTGCCAGACTTCCCCAGCCGAAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000596365.5
ENST00000597626.5
ENST00000616030.4
CDS TCA 90 bp GGAGCGCCTCTGTGCAGCCTTTGGCCATCCATCCGGAGCCCGCCCTaGTTCTCCACAGGGAGAGTGGGGAATTACAGTTCCCATCCCTGT +
Preference number: 5 (lower is better)
Translates to: GAPLCSLWPSIRSPP*FSTGRVGNYSSHPC
Trigger: ACAGGGATGGGAACTGTAATTCCCCACTCTCCCTGTGGAGAATCAGGGCGGGCTCCGGATGGATGGCCAAAGGCTGCACAGAGGCGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS TCA 90 bp GCTGAGACAACCACAGGTGGGCTCCCTTCTGCTCTCACTCCCTCCTaGGGCTTCCTCTTCACAGGAGCGCCTCTGTGCAGCCTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: AETTTGGLPSALTPS*GFLFTGAPLCSLWP
Trigger: TGGCCAAAGGCTGCACAGAGGCGCTCCTGTGAAGAGGAAGCCTCAGGAGGGAGTGAGAGCAGAAGGGAGCCCACCTGTGGTTGTCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS GCA 90 bp GCCCTGGATCTCAAGGAACCTGCCGCCTCGAGCACCAGGGTGCGATaGTTCGGCTGGGGAAGTCTGGCAGTCTTCAAGGTTATGGGACCT +
Preference number: 5 (lower is better)
Translates to: ALDLKEPAASSTRVR*FGWGSLAVFKVMGP
Trigger: AGGTCCCATAACCTTGAAGACTGCCAGACTTCCCCAGCCGAAGCATCGCACCCTGGTGCTCGAGGCGGCAGGTTCCTTGAGATCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616030.4
CDS CCA 90 bp GGGTGCGATGCTTCGGCTGGGGAAGTCTGGCAGTCTTCAAGGTTATaGGACCTGGCGAGTGGGAGCGACTCAGGACGACCCAGCGTTTGT +
Preference number: 5 (lower is better)
Translates to: GCDASAGEVWQSSRL*DLASGSDSGRPSVC
Trigger: ACAAACGCTGGGTCGTCCTGAGTCGCTCCCACTCGCCAGGTCCCATAACCTTGAAGACTGCCAGACTTCCCCAGCCGAAGCATCGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596365.5
ENST00000597626.5
ENST00000616030.4
CDS TCA 90 bp CCTAGCCCGCCCTTCCTACAAGCCTGCCCTGGACTCACCATCAGCTaGAATGAAGCAGGAAGTGGAGCAGGGGATCTGTGGGCCCCACAA +
Preference number: 5 (lower is better)
Translates to: PSPPFLQACPGLTIS*NEAGSGAGDLWAPQ
Trigger: TTGTGGGGCCCACAGATCCCCTGCTCCACTTCCTGCTTCATTTCAGCTGATGGTGAGTCCAGGGCAGGCTTGTAGGAAGGGCGGGCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 90 bp AGGCTTCCTCACAATGTGAGGAGATGGCGCCCCCTCGTGTCGAGATaGTCCTTCAGCACCTGGACCAGGCTGAGAGCGGTGACCTTGAGC +
Preference number: 5 (lower is better)
Translates to: RLPHNVRRWRPLVSR*SFSTWTRLRAVTLS
Trigger: GCTCAAGGTCACCGCTCTCAGCCTGGTCCAGGTGCTGAAGGATCATCTCGACACGAGGGGGCGCCATCTCCTCACATTGTGAGGAAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601471.1
CDS GCA 90 bp AGAGGTAGAAGGTCTGGAGGACTCGAGCCAAGGCTCCCGCAATTGTaGAAGGACACACAGGGTGGCCTGACGCAGAGTGAGACAGCGAGG +
Preference number: 5 (lower is better)
Translates to: RGRRSGGLEPRLPQL*KDTQGGLTQSETAR
Trigger: CCTCGCTGTCTCACTCTGCGTCAGGCCACCCTGTGTGTCCTTGCACAATTGCGGGAGCCTTGGCTCGAGTCCTCCAGACCTTCTACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS GCA 90 bp CCCTCCTGGGATGACCGGTACCAAACCTCGAGCACCAGGGTGCGATaGTTCGGCTGGGGAAGTCTGGCAGTCTTCAAGGTTATGGGACCT +
Preference number: 5 (lower is better)
Translates to: PSWDDRYQTSSTRVR*FGWGSLAVFKVMGP
Trigger: AGGTCCCATAACCTTGAAGACTGCCAGACTTCCCCAGCCGAAGCATCGCACCCTGGTGCTCGAGGTTTGGTACCGGTCATCCCAGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596365.5
CDS GCA 90 bp ACATGGCCCTGGATCTCAAGGAACCTGCCGCCTCGAGCACCAGGGTaGGATGCTTCGGCTGGGGAAGTCTGGCAGTCTTCAAGGTTATGG +
Preference number: 5 (lower is better)
Translates to: TWPWISRNLPPRAPG*DASAGEVWQSSRLW
Trigger: CCATAACCTTGAAGACTGCCAGACTTCCCCAGCCGAAGCATCGCACCCTGGTGCTCGAGGCGGCAGGTTCCTTGAGATCCAGGGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616030.4
CDS TCA 90 bp TATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAGTCTCGCTaGTTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: YPTPGSEGPTPTESR*LLAQQSEIKLQGSS
Trigger: GCTGCTGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGACTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427447.5
ENST00000599421.1
CDS TCA 90 bp GCTGGTCTGGGGTCAGGATACCATGGAGTCAGGAGGACTCCTGGGTaGCTAGTGCCACCACTCACTTGCAGTGTGACCTTGGGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: AGLGSGYHGVRRTPG*LVPPLTCSVTLGKP
Trigger: TGGCTTCCCCAAGGTCACACTGCAAGTGAGTGGTGGCACTAGTCACCCAGGAGTCCTCCTGACTCCATGGTATCCTGACCCCAGACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 90 bp ACAAGGGCTCTGTGCAGCCTTTGGCCATCCATCCGGAGCCCGCCCTaGTTCTCCACAGGGAGAGTGGGGAATTACAGTTCCCATCCCTGT +
Preference number: 5 (lower is better)
Translates to: TRALCSLWPSIRSPP*FSTGRVGNYSSHPC
Trigger: ACAGGGATGGGAACTGTAATTCCCCACTCTCCCTGTGGAGAATCAGGGCGGGCTCCGGATGGATGGCCAAAGGCTGCACAGAGCCCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600155.1
CDS GCA 90 bp AGGATCCCTCCTGGGATGACCGGTACCAAACCTCGAGCACCAGGGTaGGATGCTTCGGCTGGGGAAGTCTGGCAGTCTTCAAGGTTATGG +
Preference number: 5 (lower is better)
Translates to: RIPPGMTGTKPRAPG*DASAGEVWQSSRLW
Trigger: CCATAACCTTGAAGACTGCCAGACTTCCCCAGCCGAAGCATCGCACCCTGGTGCTCGAGGTTTGGTACCGGTCATCCCAGGAGGGATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596365.5
CDS CCA 90 bp TTCCTCATCTTGTGGCTGGACCTTGGGAGGACCCTTGGAATTCCCTaGGAGAGCTCTTATCTAGGACTGGCCCCCTCTCCTGCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: FLILWLDLGRTLGIP*ESSYLGLAPSPARS
Trigger: GCTCCTGGCAGGAGAGGGGGCCAGTCCTAGATAAGAGCTCTCCCAGGGAATTCCAAGGGTCCTCCCAAGGTCCAGCCACAAGATGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 90 bp CCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTaGGGTACCGGGTTCATCTCTCTAGGGAGTGCCAGACAGTGGGCG +
Preference number: 5 (lower is better)
Translates to: PSVSDAEDGDFCISI*GTGFISLGSARQWA
Trigger: CGCCCACTGTCTGGCACTCCCTAGAGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427447.5
ENST00000599421.1
CDS TCA 90 bp CATGCTTGGCTCAGTTGCGTTTATGAAGCTTCTTCCACTCGGCTCTaGGCCTTGCTCCTGGAGTCATCCTTCGGCCAGGGCTGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: HAWLSCVYEASSTRL*ALLLESSFGQGCWH
Trigger: GTGCCAGCAGCCCTGGCCGAAGGATGACTCCAGGAGCAAGGCTCAGAGCCGAGTGGAAGAAGCTTCATAAACGCAACTGAGCCAAGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 90 bp CCAGTCTCTGCTGAGCTGGGCGTCTTCAGGTTGTCTCGGACCTCATaGAGCTCCCAGTCTATCAGGTGCTGCTTGGACTTCTCGTGTCCT +
Preference number: 5 (lower is better)
Translates to: PVSAELGVFRLSRTS*SSQSIRCCLDFSCP
Trigger: AGGACACGAGAAGTCCAAGCAGCACCTGATAGACTGGGAGCTCCATGAGGTCCGAGACAACCTGAAGACGCCCAGCTCAGCAGAGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593977.1
CDS TCA 90 bp TGCAGCCTCGAACTTCTGACTCAAGCCATCCTCCCACCTGCCTCCTaGGTAGCTGGAACCACAGGCACATCCCATCATGCTTGGCTCAGT +
Preference number: 5 (lower is better)
Translates to: CSLELLTQAILPPAS*VAGTTGTSHHAWLS
Trigger: ACTGAGCCAAGCATGATGGGATGTGCCTGTGGTTCCAGCTACTCAGGAGGCAGGTGGGAGGATGGCTTGAGTCAGAAGTTCGAGGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS GCA 90 bp TCTGGTGGAGCCCTGCCCAGAAAATGGCCACTTCCGGAGCAAAACTaGCACAGCAACAGGCCTTGTCAACAGCAGCCTCCAACCGTTAAC +
Preference number: 5 (lower is better)
Translates to: SGGALPRKWPLPEQN*HSNRPCQQQPPTVN
Trigger: GTTAACGGTTGGAGGCTGCTGTTGACAAGGCCTGTTGCTGTGGCAGTTTTGCTCCGGAAGTGGCCATTTTCTGGGCAGGGCTCCACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600155.1
CDS CCA 90 bp CCAGGCATTAAGTCTGACACTGGGGACATCAAAACGGATAACACATaGCCCTGGATCTCAAGGAACCTGCCGCCTCGAGCACCAGGGTGC +
Preference number: 5 (lower is better)
Translates to: PGIKSDTGDIKTDNT*PWISRNLPPRAPGC
Trigger: GCACCCTGGTGCTCGAGGCGGCAGGTTCCTTGAGATCCAGGGCCATGTGTTATCCGTTTTGATGTCCCCAGTGTCAGACTTAATGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616030.4
CDS TCA 90 bp AGGCTGCTCAAGAAGAAGCCACAGAAAGAGCTGAGCCTCAGCAGCTaGGCTCAGTGGACCCCAGAGCATCTTGCAGAATTCGCCTTTCCG +
Preference number: 5 (lower is better)
Translates to: RLLKKKPQKELSLSS*AQWTPEHLAEFAFP
Trigger: CGGAAAGGCGAATTCTGCAAGATGCTCTGGGGTCCACTGAGCTCAGCTGCTGAGGCTCAGCTCTTTCTGTGGCTTCTTCTTGAGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS TCA 90 bp CAGCTCTCCCCAGAGGCTGGAGGGCTACTGATGATTCCACGGAAGTaGCTGCATGCACCGATCCTAACCCCCGATAACTCTAAGGATGCT +
Preference number: 5 (lower is better)
Translates to: QLSPEAGGLLMIPRK*LHAPILTPDNSKDA
Trigger: AGCATCCTTAGAGTTATCGGGGGTTAGGATCGGTGCATGCAGTCACTTCCGTGGAATCATCAGTAGCCCTCCAGCCTCTGGGGAGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS GCA 90 bp CAGGCCAGGGAAGCAGTGGGACTCCCCACAGGGAAGAGGAGCCACTaGCTACTAAACATGCATGGTTTGTCTTCACAGTGGACAGTTTGG +
Preference number: 5 (lower is better)
Translates to: QAREAVGLPTGKRSH*LLNMHGLSSQWTVW
Trigger: CCAAACTGTCCACTGTGAAGACAAACCATGCATGTTTAGTAGGCAGTGGCTCCTCTTCCCTGTGGGGAGTCCCACTGCTTCCCTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400353.6
ENST00000427447.5
ENST00000609132.1
CDS TCA 90 bp GAGAGTGGGGAATTACAGTTCCCATCCCTGTTGGGTGGAACCAGATaGCATCCTAAAGGCCCTTCCTACTGGGACTCGCTCCATCCTGGT +
Preference number: 5 (lower is better)
Translates to: ESGELQFPSLLGGTR*HPKGPSYWDSLHPG
Trigger: ACCAGGATGGAGCGAGTCCCAGTAGGAAGGGCCTTTAGGATGTCATCTGGTTCCACCCAACAGGGATGGGAACTGTAATTCCCCACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000600155.1
CDS TCA 90 bp ACATCTTGGTCAACAGGCTGCTCAAGAAGAAGCCACAGAAAGAGCTaGGCCTCAGCAGCTGAGCTCAGTGGACCCCAGAGCATCTTGCAG +
Preference number: 5 (lower is better)
Translates to: TSWSTGCSRRSHRKS*ASAAELSGPQSILQ
Trigger: CTGCAAGATGCTCTGGGGTCCACTGAGCTCAGCTGCTGAGGCTCAGCTCTTTCTGTGGCTTCTTCTTGAGCAGCCTGTTGACCAAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS TCA 90 bp ACAGCTCTGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCTCTAGG +
Preference number: 5 (lower is better)
Translates to: TALVYSSQRERRRRR*FLHFHLRYRVHLSR
Trigger: CCTAGAGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCAGAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427447.5
ENST00000599421.1
CDS CCA 90 bp ATTAAGTCTGACACTGGGGACATCAAAACGGATAACACATGGCCCTaGATCTCAAGGAACCTGCCGCCTCGAGCACCAGGGTGCGATGCT +
Preference number: 5 (lower is better)
Translates to: IKSDTGDIKTDNTWP*ISRNLPPRAPGCDA
Trigger: AGCATCGCACCCTGGTGCTCGAGGCGGCAGGTTCCTTGAGATCCAGGGCCATGTGTTATCCGTTTTGATGTCCCCAGTGTCAGACTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616030.4
CDS TCA 90 bp CCAAGATGGCCGAATAGGAACAGCTCTGGTCTACAGCTCCCAGCGTaGGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTA +
Preference number: 5 (lower is better)
Translates to: PRWPNRNSSGLQLPA*ATQKTVISAFPSEV
Trigger: TACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCAGAGCTGTTCCTATTCGGCCATCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427447.5
ENST00000599421.1
CDS GCA 90 bp GGAGTGTGGCACCCACAGCTGTGTGGAATGCTGGAGCTGACAATTTaGTTGGAGCTTCCAACAGGGAAATCGCTGCTTGATGACTGGTGT +
Preference number: 5 (lower is better)
Translates to: GVWHPQLCGMLELTI*LELPTGKSLLDDWC
Trigger: ACACCAGTCATCAAGCAGCGATTTCCCTGTTGGAAGCTCCAAGCAAATTGTCAGCTCCAGCATTCCACACAGCTGTGGGTGCCACACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 90 bp GGCACATCTGAGGAAGAGCCCAACAGTAATTCCTCATCTTGTGGCTaGACCTTGGGAGGACCCTTGGAATTCCCTGGGAGAGCTCTTATC +
Preference number: 5 (lower is better)
Translates to: GTSEEEPNSNSSSCG*TLGGPLEFPGRALI
Trigger: GATAAGAGCTCTCCCAGGGAATTCCAAGGGTCCTCCCAAGGTCCAGCCACAAGATGAGGAATTACTGTTGGGCTCTTCCTCAGATGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 90 bp ATGATCACACTCGGTCATCCCAACAACCCAGCCAGACTGTTCTTGTaGACACCCTTTCCAGAAATGGGGACAGTCTCGTGCCAAGATGCC +
Preference number: 5 (lower is better)
Translates to: MITLGHPNNPARLFL*TPFPEMGTVSCQDA
Trigger: GGCATCTTGGCACGAGACTGTCCCCATTTCTGGAAAGGGTGTTCACAAGAACAGTCTGGCTGGGTTGTTGGGATGACCGAGTGTGATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000600155.1
CDS TCA 90 bp AAGCCCACTTTGGGGAGTCAATGTGGAATCAGGGTAGAAGATTCTTaGTGCCCAGGTGGCCATCCTCCACCTAAACAGGATCCTGCCAAC +
Preference number: 5 (lower is better)
Translates to: KPTLGSQCGIRVEDS*CPGGHPPPKQDPAN
Trigger: GTTGGCAGGATCCTGTTTAGGTGGAGGATGGCCACCTGGGCATCAAGAATCTTCTACCCTGATTCCACATTGACTCCCCAAAGTGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400353.6
ENST00000427447.5
CDS TCA 90 bp CTCGGACCTCATGGAGCTCCCAGTCTATCTCGAATCCTCCATATGTaGGGAGTTCCTGGCATAGTCCCCATCATACACATATGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: LGPHGAPSLSRILHM*GVPGIVPIIHICAG
Trigger: CCCTGCACATATGTGTATGATGGGGACTATGCCAGGAACTCCTCACATATGGAGGATTCGAGATAGACTGGGAGCTCCATGAGGTCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620580.1
CDS GCA 90 bp AGAGCTGAGCCTCAGCAGCTGAGCTCAGTGGACCCCAGAGCATCTTaGAGAATTCGCCTTTCCGTTCTACCTGCAGAAGAACTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: RAEPQQLSSVDPRAS*RIRLSVLPAEELPN
Trigger: ATTTGGAAGTTCTTCTGCAGGTAGAACGGAAAGGCGAATTCTGCAAGATGCTCTGGGGTCCACTGAGCTCAGCTGCTGAGGCTCAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS GCA 90 bp CTGACGCAGAGTGAGACAGCGAGGTGGCGAGAAGTGAGTAGATTCTaGATGTCTTTGGAAGGCAGGGCCAAAGGATTTGCCTACACATTG +
Preference number: 5 (lower is better)
Translates to: LTQSETARWREVSRF*MSLEGRAKGFAYTL
Trigger: CAATGTGTAGGCAAATCCTTTGGCCCTGCCTTCCAAAGACATGCAGAATCTACTCACTTCTCGCCACCTCGCTGTCTCACTCTGCGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS GCA 90 bp ACCGAGGTTTGTAGAAGGAAAGCTCTAGAACAAAATTCATCCCGATaGCAGAGGCTTCCTCACAATGTGAGGAGATGGCGCCCCCTCGTG +
Preference number: 5 (lower is better)
Translates to: TEVCRRKALEQNSSR*QRLPHNVRRWRPLV
Trigger: CACGAGGGGGCGCCATCTCCTCACATTGTGAGGAAGCCTCTGGCATCGGGATGAATTTTGTTCTAGAGCTTTCCTTCTACAAACCTCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601471.1
CDS CCA 90 bp AGAGCTGAGAGAGGGCATCAGAAAATGGACTCCGAATATAGGGAGTaGCATGGGCCACATCTTGGTCAACAGGCTGCTCAAGAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: RAERGHQKMDSEYRE*HGPHLGQQAAQEEA
Trigger: GGCTTCTTCTTGAGCAGCCTGTTGACCAAGATGTGGCCCATGCCACTCCCTATATTCGGAGTCCATTTTCTGATGCCCTCTCTCAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000620580.1
CDS CCA 90 bp CTGAGGAAGAGCCCAACAGTAATTCCTCATCTTGTGGCTGGACCTTaGGAGGACCCTTGGAATTCCCTGGGAGAGCTCTTATCTAGGACT +
Preference number: 5 (lower is better)
Translates to: LRKSPTVIPHLVAGP*EDPWNSLGELLSRT
Trigger: AGTCCTAGATAAGAGCTCTCCCAGGGAATTCCAAGGGTCCTCCCAAGGTCCAGCCACAAGATGAGGAATTACTGTTGGGCTCTTCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 90 bp AAGGAAAAGGAGTGTGGCACCCACAGCTGTGTGGAATGCTGGAGCTaGCAATTTGCTTGGAGCTTCCAACAGGGAAATCGCTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: KEKECGTHSCVECWS*QFAWSFQQGNRCLM
Trigger: CATCAAGCAGCGATTTCCCTGTTGGAAGCTCCAAGCAAATTGTCAGCTCCAGCATTCCACACAGCTGTGGGTGCCACACTCCTTTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 90 bp GACGTAAGTAAAGAGCTGTCTGAAGCCCACTTTGGGGAGTCAATGTaGAATCAGGGTAGAAGATTCTTGATGCCCAGGTGGCCATCCTCC +
Preference number: 5 (lower is better)
Translates to: DVSKELSEAHFGESM*NQGRRFLMPRWPSS
Trigger: GGAGGATGGCCACCTGGGCATCAAGAATCTTCTACCCTGATTCCACATTGACTCCCCAAAGTGGGCTTCAGACAGCTCTTTACTTACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400353.6
ENST00000427447.5
CDS TCA 90 bp AATACCTGCCATCGAATAAACACCATGGCCAGCCATAGAGACGCATaGTCACACTCGGTCATCCCAACAACCCAGCCAGACTGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: NTCHRINTMASHRDA*SHSVIPTTQPDCSC
Trigger: ACAAGAACAGTCTGGCTGGGTTGTTGGGATGACCGAGTGTGATCATGCGTCTCTATGGCTGGCCATGGTGTTTATTCGATGGCAGGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000600155.1
CDS GCA 90 bp TGGGGGCATCACAGGGGCTCAGTTTGGGACACTTTAAGTCTGAGATaGCTCTTAGTGGTTCAAATAGAGGTACAGGGTAGACAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: WGHHRGSVWDTLSLR*LLVVQIEVQGRQRE
Trigger: CTCTCTCTGTCTACCCTGTACCTCTATTTGAACCACTAAGAGGCATCTCAGACTTAAAGTGTCCCAAACTGAGCCCCTGTGATGCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS GCA 90 bp GTCTTCAGGTTGTCTCGGACCTCATGGAGCTCCCAGTCTATCAGGTaGTGCTTGGACTTCTCGTGTCCTAATTTTCAAATAGCCCACAAG +
Preference number: 5 (lower is better)
Translates to: VFRLSRTSWSSQSIR*CLDFSCPNFQIAHK
Trigger: CTTGTGGGCTATTTGAAAATTAGGACACGAGAAGTCCAAGCAGCACCTGATAGACTGGGAGCTCCATGAGGTCCGAGACAACCTGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593977.1
CDS CCA 90 bp AAGAGGTCAACAATCAAGGAATGCAAGGAATGCAGCATTAGAAGCTaGCAAAGGCAAGGAAATGGGTTCTCCCAGAGCCTCCACGGGGAT +
Preference number: 5 (lower is better)
Translates to: KRSTIKECKECSIRS*QRQGNGFSQSLHGD
Trigger: ATCCCCGTGGAGGCTCTGGGAGAACCCATTTCCTTGCCTTTGCCAGCTTCTAATGCTGCATTCCTTGCATTCCTTGATTGTTGACCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 90 bp GCAAAGGCAAGGAAATGGGTTCTCCCAGAGCCTCCACGGGGATCTTaGTCCTACCAACATCTTGATTTTAGCCCAACGAAATTGATGTCA +
Preference number: 5 (lower is better)
Translates to: AKARKWVLPEPPRGS*SYQHLDFSPTKLMS
Trigger: TGACATCAATTTCGTTGGGCTAAAATCAAGATGTTGGTAGGACCAAGATCCCCGTGGAGGCTCTGGGAGAACCCATTTCCTTGCCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 90 bp GACGTACACAGCCTGACCCCTGGGACCTGTGAATATTTCCCTCTGTaGCAAAAGAGACTTTGCAGAAGAGACCAAGTCAAAGATCTTGAG +
Preference number: 5 (lower is better)
Translates to: DVHSLTPGTCEYFPL*QKRLCRRDQVKDLE
Trigger: CTCAAGATCTTTGACTTGGTCTCTTCTGCAAAGTCTCTTTTGCCACAGAGGGAAATATTCACAGGTCCCAGGGGTCAGGCTGTGTACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 90 bp GGGCAGCAGGGACTTTCAGTGCGTGGCTATAGGAAATTTACCAAGTaGAACAGGAGACTCCGAAGAGTTCATGTGCTTTTCCGAAGAAGT +
Preference number: 5 (lower is better)
Translates to: GQQGLSVRGYRKFTK*NRRLRRVHVLFRRS
Trigger: ACTTCTTCGGAAAAGCACATGAACTCTTCGGAGTCTCCTGTTCCACTTGGTAAATTTCCTATAGCCACGCACTGAAAGTCCCTGCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427447.5
ENST00000609132.1
CDS TCA 90 bp ACTGGTTATGACCACGATCTGATGGGTCATCGTTACTTGAAGGGGTaGGCAGAGGCTTCGCTTAACTTCCTTAAGGCTCTCAATGGAAGA +
Preference number: 5 (lower is better)
Translates to: TGYDHDLMGHRYLKG*AEASLNFLKALNGR
Trigger: TCTTCCATTGAGAGCCTTAAGGAAGTTAAGCGAAGCCTCTGCTCACCCCTTCAAGTAACGATGACCCATCAGATCGTGGTCATAACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400353.6
ENST00000427447.5
CDS TCA 90 bp GGGGCTGGCGTTGACAATAACCATTTCCCAGCTTTTAGAAAGAGGTaGCAGAGCTCTGTTGTAGTGTCTGAGCCACAACTCAAGAAGGTA +
Preference number: 5 (lower is better)
Translates to: GAGVDNNHFPAFRKR*QSSVVVSEPQLKKV
Trigger: TACCTTCTTGAGTTGTGGCTCAGACACTACAACAGAGCTCTGTCACCTCTTTCTAAAAGCTGGGAAATGGTTATTGTCAACGCCAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427447.5
ENST00000599421.1
CDS GCA 90 bp ATAGGAAATTTACCAAGTGGAACAGGAGACTCCGAAGAGTTCATGTaGTTTTCCGAAGAAGTGTCCAAAGGCACGGCAGAGAACACCCAG +
Preference number: 5 (lower is better)
Translates to: IGNLPSGTGDSEEFM*FSEEVSKGTAENTQ
Trigger: CTGGGTGTTCTCTGCCGTGCCTTTGGACACTTCTTCGGAAAAGCACATGAACTCTTCGGAGTCTCCTGTTCCACTTGGTAAATTTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609132.1
CDS TCA 90 bp ATTGTACTGCCCAGCTTGCTACAGCACAGTGACAAGATGTGCTGGTaGTATCTTTCAGTGGAGATTGTACTTTGCACTGGACAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: IVLPSLLQHSDKMCW*YLSVEIVLCTGQVL
Trigger: GAGGACTTGTCCAGTGCAAAGTACAATCTCCACTGAAAGATATCACCAGCACATCTTGTCACTGTGCTGTAGCAAGCTGGGCAGTACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400353.6
ENST00000427447.5
CDS CCA 90 bp CACTGCCTACTAAACATGCATGGTTTGTCTTCACAGTGGACAGTTTaGTGGCCGCAGACATCATCTTCTACAACCACATCTACATCCTTG +
Preference number: 5 (lower is better)
Translates to: HCLLNMHGLSSQWTV*WPQTSSSTTTSTSL
Trigger: CAAGGATGTAGATGTGGTTGTAGAAGATGATGTCTGCGGCCACCAAACTGTCCACTGTGAAGACAAACCATGCATGTTTAGTAGGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000400353.6
ENST00000427447.5
ENST00000593977.1
ENST00000594370.5
ENST00000594752.5
ENST00000595747.5
ENST00000596365.5
ENST00000600155.1
ENST00000616030.4
ENST00000620580.1
CDS TCA 90 bp GACTTGTGTGTGTCTTCTCTTCCCATTAACATCCCAACTGCCTGGTaGACAACCAGCTCGAGGAAAAGAAAAAGGAGATTTGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: DLCVSSLPINIPTAW*TTSSRKRKRRFAAV
Trigger: AACAGCAGCAAATCTCCTTTTTCTTTTCCTCGAGCTGGTTGTTCACCAGGCAGTTGGGATGTTAATGGGAAGAGAAGACACACACAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 90 bp AAAGCTCTATCTGGTGGTTCAATAGTTCAGCAGCTCCACATTGGTTaGATTCCTATTGTGTTCCCAGGCATTAAGTCTGACACTGGGGAC +
Preference number: 5 (lower is better)
Translates to: KALSGGSIVQQLHIG*IPIVFPGIKSDTGD
Trigger: GTCCCCAGTGTCAGACTTAATGCCTGGGAACACAATAGGAATTCAACCAATGTGGAGCTGCTGAACTATTGAACCACCAGATAGAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613667.1
ENST00000616030.4
CDS CCA 90 bp ACACTGATAGTCTACTCTGGCCTCTGTGACCAGAATTTGTTCTTGTaGAATGTAGCCGGAGAATCTACAAGTGAAAACGCAAGGCGTTGT +
Preference number: 5 (lower is better)
Translates to: TLIVYSGLCDQNLFL*NVAGESTSENARRC
Trigger: ACAACGCCTTGCGTTTTCACTTGTAGATTCTCCGGCTACATTCCACAAGAACAAATTCTGGTCACAGAGGCCAGAGTAGACTATCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 90 bp GGGGATCTTGGTCCTACCAACATCTTGATTTTAGCCCAACGAAATTaGTGTCAGACTCCTGACCTCCAGAACGCTAAGAGAATAAATGCA +
Preference number: 5 (lower is better)
Translates to: GDLGPTNILILAQRN*CQTPDLQNAKRINA
Trigger: TGCATTTATTCTCTTAGCGTTCTGGAGGTCAGGAGTCTGACATCAATTTCGTTGGGCTAAAATCAAGATGTTGGTAGGACCAAGATCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 90 bp CCGCACCCAGCTGTTTCACTGTTTTGTATTCCGTTTCACGGTTGTTaGGAGCAATCCATGCATGAAGTAGGACATAGATGTGGAATTCAA +
Preference number: 5 (lower is better)
Translates to: PHPAVSLFCIPFHGC*EQSMHEVGHRCGIQ
Trigger: TTGAATTCCACATCTATGTCCTACTTCATGCATGGATTGCTCTCAACAACCGTGAAACGGAATACAAAACAGTGAAACAGCTGGGTGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594370.5
CDS TCA 90 bp TTAGGGGTAATCTTTAGCTTTTATGTTCTGCCAGTGAGAGGGCATTaGGTTTGTAGATTCCCAGGCATGACTGAAGCCAAGTCTCAGCTT +
Preference number: 5 (lower is better)
Translates to: LGVIFSFYVLPVRGH*VCRFPGMTEAKSQL
Trigger: AAGCTGAGACTTGGCTTCAGTCATGCCTGGGAATCTACAAACTCAATGCCCTCTCACTGGCAGAACATAAAAGCTAAAGATTACCCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628906.2
CDS TCA 90 bp AGCTTCCAACAGGGAAATCGCTGCTTGATGACTGGTGTAGACCCATaGTCTAGCTACTCTATTCAAAGAAATAGTCGGCAACTTTGCAAA +
Preference number: 5 (lower is better)
Translates to: SFQQGNRCLMTGVDP*SSYSIQRNSRQLCK
Trigger: TTTGCAAAGTTGCCGACTATTTCTTTGAATAGAGTAGCTAGATCATGGGTCTACACCAGTCATCAAGCAGCGATTTCCCTGTTGGAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 90 bp CAAACACATGGCAGTTCACTGGGTGATAGTGAACAGGTGTGCCTTTaGGTATTCCCAGAAATAACTGGAGTTGGACATATTCAAAGACAA +
Preference number: 5 (lower is better)
Translates to: QTHGSSLGDSEQVCL*VFPEITGVGHIQRQ
Trigger: TTGTCTTTGAATATGTCCAACTCCAGTTATTTCTGGGAATACCCAAAGGCACACCTGTTCACTATCACCCAGTGAACTGCCATGTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 90 bp CCCAGTCTATCCTGGGTTAAACAAATTCCAGAAAATAGTCTAACTTaGCTCTGTGTGGGTGTAACCCACCAATCTTGCTTTTCTAAAGGC +
Preference number: 5 (lower is better)
Translates to: PSLSWVKQIPENSLT*LCVGVTHQSCFSKG
Trigger: GCCTTTAGAAAAGCAAGATTGGTGGGTTACACCCACACAGAGCCAAGTTAGACTATTTTCTGGAATTTGTTTAACCCAGGATAGACTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613667.1
ENST00000616030.4
CDS GCA 90 bp ATCGTGACAAGCTGCTGTGTTTTTCATGAGGTTGTAAGATGTAATTaGTCAGGCATTCAGATGGTATTAGAACGAGGGAGTGTCATCCTA +
Preference number: 5 (lower is better)
Translates to: IVTSCCVFHEVVRCN*SGIQMVLERGSVIL
Trigger: TAGGATGACACTCCCTCGTTCTAATACCATCTGAATGCCTGAGCAATTACATCTTACAACCTCATGAAAAACACAGCAGCTTGTCACGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS GCA 90 bp ATCGTGACAAGCTGCTGTGTTTTTCATGAGGTTGTAAGATGTAATTaGTCAGGCATTCAGATGGTATTAGAACGAGGGAGTGTCATCCAT +
Preference number: 5 (lower is better)
Translates to: IVTSCCVFHEVVRCN*SGIQMVLERGSVIH
Trigger: ATGGATGACACTCCCTCGTTCTAATACCATCTGAATGCCTGAGCAATTACATCTTACAACCTCATGAAAAACACAGCAGCTTGTCACGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609132.1
CDS GCA 90 bp AAAATGTACTGCCTTAAATCCAACTCATGCCGAGATTTCCAGGTTTaGTTTGAGGAATCCACTGCACTGATGGTGACTTGTTTAAAATTC +
Preference number: 5 (lower is better)
Translates to: KMYCLKSNSCRDFQV*FEESTALMVTCLKF
Trigger: GAATTTTAAACAAGTCACCATCAGTGCAGTGGATTCCTCAAAGCAAACCTGGAAATCTCGGCATGAGTTGGATTTAAGGCAGTACATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000400353.6
ENST00000427447.5
ENST00000593977.1
ENST00000594370.5
ENST00000594752.5
ENST00000595747.5
ENST00000596365.5
ENST00000600155.1
ENST00000613667.1
ENST00000616030.4
ENST00000620580.1
ENST00000628906.2
CDS GCA 90 bp GTTCTCTTGAGAAACTGTTCAAATTTTCAGGAGCTGAAAATGTACTaGCTTAAATCCAACTCATGCCGAGATTTCCAGGTTTGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: VLLRNCSNFQELKMY*LKSNSCRDFQVCFE
Trigger: CTCAAAGCAAACCTGGAAATCTCGGCATGAGTTGGATTTAAGGCAGTACATTTTCAGCTCCTGAAAATTTGAACAGTTTCTCAAGAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000400353.6
ENST00000427447.5
ENST00000593977.1
ENST00000594370.5
ENST00000594752.5
ENST00000595747.5
ENST00000596365.5
ENST00000600155.1
ENST00000613667.1
ENST00000616030.4
ENST00000620580.1
ENST00000628906.2
CDS GCA 90 bp TTTGGTGGCCGCAGACATCATCTTCTACAACCACATCTACATCCTTaGCTTTCTGTTTCAAGTTGTTCTCTTGAGAAACTGTTCAAATTT +
Preference number: 5 (lower is better)
Translates to: FGGRRHHLLQPHLHP*LSVSSCSLEKLFKF
Trigger: AAATTTGAACAGTTTCTCAAGAGAACAACTTGAAACAGAAAGGCAAGGATGTAGATGTGGTTGTAGAAGATGATGTCTGCGGCCACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000400353.6
ENST00000427447.5
ENST00000593977.1
ENST00000594370.5
ENST00000594752.5
ENST00000595747.5
ENST00000596365.5
ENST00000600155.1
ENST00000613667.1
ENST00000616030.4
ENST00000620580.1
ENST00000628906.2
CDS GCA 90 bp CTCAAAACTGCATTATTCACGGTAACATCATTCATCGTGACAAGCTaGTGTGTTTTTCATGAGGTTGTAAGATGTAATTGCTCAGGCATT +
Preference number: 5 (lower is better)
Translates to: LKTALFTVTSFIVTS*CVFHEVVRCNCSGI
Trigger: AATGCCTGAGCAATTACATCTTACAACCTCATGAAAAACACAGCAGCTTGTCACGATGAATGATGTTACCGTGAATAATGCAGTTTTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427447.5
ENST00000609132.1
CDS TCA 90 bp GTGTTAGCAGGATTAGACAATAGGGTACGAAAGAGAACATGTCATTaGCTTGTACTTATCTCTCAAACTATCCAATGGAAAATTGAGAAA +
Preference number: 5 (lower is better)
Translates to: VLAGLDNRVRKRTCH*LVLISQTIQWKIEK
Trigger: TTTCTCAATTTTCCATTGGATAGTTTGAGAGATAAGTACAAGTCAATGACATGTTCTCTTTCGTACCCTATTGTCTAATCCTGCTAACAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 72 bp CTCTCTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTaGGTGCGCGCACCGTGCGCGAGCCGAAGCAGGGCG +
Preference number: 6 (lower is better)
Translates to: LSRECQTVGAGQ*VRAPCASRSRA
Trigger: CGCCCTGCTTCGGCTCGCGCACGGTGCGCGCACCCACTGACCTGCGCCCACTGTCTGGCACTCCCTAGAGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427447.5
ENST00000599421.1
CDS CCA 72 bp GCTTCGGCTGGGGAAGTCTGGCAGTCTTCAAGGTTATaGGACCTGGCGAGTGGGAGCGACTCAGGACGACCC +
Preference number: 6 (lower is better)
Translates to: ASAGEVWQSSRL*DLASGSDSGRP
Trigger: GGGTCGTCCTGAGTCGCTCCCACTCGCCAGGTCCCATAACCTTGAAGACTGCCAGACTTCCCCAGCCGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596365.5
ENST00000597626.5
ENST00000616030.4
CDS CCA 72 bp CGAGCACCAGGGTGCGATGCTTCGGCTGGGGAAGTCTaGCAGTCTTCAAGGTTATGGGACCTGGCGAGTGGG +
Preference number: 6 (lower is better)
Translates to: RAPGCDASAGEV*QSSRLWDLASG
Trigger: CCCACTCGCCAGGTCCCATAACCTTGAAGACTGCCAGACTTCCCCAGCCGAAGCATCGCACCCTGGTGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596365.5
ENST00000597626.5
ENST00000616030.4
CDS TCA 72 bp CACAATGTGAGGAGATGGCGCCCCCTCGTGTCGAGATaGTCCTTCAGCACCTGGACCAGGCTGAGAGCGGTG +
Preference number: 6 (lower is better)
Translates to: HNVRRWRPLVSR*SFSTWTRLRAV
Trigger: CACCGCTCTCAGCCTGGTCCAGGTGCTGAAGGATCATCTCGACACGAGGGGGCGCCATCTCCTCACATTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601471.1
CDS GCA 72 bp AGGTCTGGAGGACTCGAGCCAAGGCTCCCGCAATTGTaGAAGGACACACAGGGTGGCCTGACGCAGAGTGAG +
Preference number: 6 (lower is better)
Translates to: RSGGLEPRLPQL*KDTQGGLTQSE
Trigger: CTCACTCTGCGTCAGGCCACCCTGTGTGTCCTTGCACAATTGCGGGAGCCTTGGCTCGAGTCCTCCAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS GCA 72 bp CCTGGGATGACCGGTACCAAACCTCGAGCACCAGGGTaGGATGCTTCGGCTGGGGAAGTCTGGCAGTCTTCA +
Preference number: 6 (lower is better)
Translates to: PGMTGTKPRAPG*DASAGEVWQSS
Trigger: TGAAGACTGCCAGACTTCCCCAGCCGAAGCATCGCACCCTGGTGCTCGAGGTTTGGTACCGGTCATCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596365.5
CDS GCA 72 bp CTCAAGGAACCTGCCGCCTCGAGCACCAGGGTGCGATaGTTCGGCTGGGGAAGTCTGGCAGTCTTCAAGGTT +
Preference number: 6 (lower is better)
Translates to: LKEPAASSTRVR*FGWGSLAVFKV
Trigger: AACCTTGAAGACTGCCAGACTTCCCCAGCCGAAGCATCGCACCCTGGTGCTCGAGGCGGCAGGTTCCTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616030.4
CDS GCA 72 bp TGGATCTCAAGGAACCTGCCGCCTCGAGCACCAGGGTaGGATGCTTCGGCTGGGGAAGTCTGGCAGTCTTCA +
Preference number: 6 (lower is better)
Translates to: WISRNLPPRAPG*DASAGEVWQSS
Trigger: TGAAGACTGCCAGACTTCCCCAGCCGAAGCATCGCACCCTGGTGCTCGAGGCGGCAGGTTCCTTGAGATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616030.4
CDS CCA 72 bp AGTCTGGCAGTCTTCAAGGTTATGGGACCTGGCGAGTaGGAGCGACTCAGGACGACCCAGCGTTTGTCCCCC +
Preference number: 6 (lower is better)
Translates to: SLAVFKVMGPGE*ERLRTTQRLSP
Trigger: GGGGGACAAACGCTGGGTCGTCCTGAGTCGCTCCCACTCGCCAGGTCCCATAACCTTGAAGACTGCCAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000596365.5
ENST00000597626.5
ENST00000616030.4
CDS TCA 72 bp CTGTGCAGCCTTTGGCCATCCATCCGGAGCCCGCCCTaGTTCTCCACAGGGAGAGTGGGGAATTACAGTTCC +
Preference number: 6 (lower is better)
Translates to: LCSLWPSIRSPP*FSTGRVGNYSS
Trigger: GGAACTGTAATTCCCCACTCTCCCTGTGGAGAATCAGGGCGGGCTCCGGATGGATGGCCAAAGGCTGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000600155.1
CDS GCA 72 bp GCGTTTATGAAGCTTCTTCCACTCGGCTCTGAGCCTTaGTCCTGGAGTCATCCTTCGGCCAGGGCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: AFMKLLPLGSEP*SWSHPSARAAG
Trigger: GCCAGCAGCCCTGGCCGAAGGATGACTCCAGGAGCAAGGCTCAGAGCCGAGTGGAAGAAGCTTCATAAACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 72 bp GAACAGCACATGCAAAGGCTCTGCTGGCAGCATGCCTaGTGTGTCCAAGGAAGAGCACGGGGCTTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: EQHMQRLCWQHA*CVQGRARGLEQ
Trigger: CTGCTCCAAGCCCCGTGCTCTTCCTTGGACACACCAGGCATGCTGCCAGCAGAGCCTTTGCATGTGCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS CCA 72 bp GCTGAGCTGGGCGTCTTCAGGTTGTCTCGGACCTCATaGAGCTCCCAGTCAGGTGCTGCTTGGACTTCTCGT +
Preference number: 6 (lower is better)
Translates to: AELGVFRLSRTS*SSQSGAAWTSR
Trigger: ACGAGAAGTCCAAGCAGCACCTGACTGGGAGCTCCATGAGGTCCGAGACAACCTGAAGACGCCCAGCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600155.1
CDS CCA 72 bp CTGGGGAAGTCTGGCAGTCTTCAAGGTTATGGGACCTaGCGAGTGGGAGCGACTCAGGACGACCCAGCGTTT +
Preference number: 6 (lower is better)
Translates to: LGKSGSLQGYGT*RVGATQDDPAF
Trigger: AAACGCTGGGTCGTCCTGAGTCGCTCCCACTCGCCAGGTCCCATAACCTTGAAGACTGCCAGACTTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596365.5
ENST00000597626.5
ENST00000616030.4
CDS CAA 72 bp AGAAGGTCTGGAGGACTCGAGCCAAGGCTCCCGCAATaGTGCAAGGACACACAGGGTGGCCTGACGCAGAGT +
Preference number: 6 (lower is better)
Translates to: RRSGGLEPRLPQ*CKDTQGGLTQS
Trigger: ACTCTGCGTCAGGCCACCCTGTGTGTCCTTGCACAATTGCGGGAGCCTTGGCTCGAGTCCTCCAGACCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS CAA 90 bp CAAAGAGGTAGAAGGTCTGGAGGACTCGAGCCAAGGCTCCCGCAATaGTGCAAGGACACACAGGGTGGCCTGACGCAGAGTGAGACAGCG +
Preference number: 6 (lower is better)
Translates to: QRGRRSGGLEPRLPQ*CKDTQGGLTQSETA
Trigger: CGCTGTCTCACTCTGCGTCAGGCCACCCTGTGTGTCCTTGCACAATTGCGGGAGCCTTGGCTCGAGTCCTCCAGACCTTCTACCTCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS CAA 90 bp TGTTTCTCTCCAACTCCACTCCCAGCGGCCCAGGTTCTTCTGCTGTaGCTGAGACAACCACAGGTGGGCTCCCTTCTGCTCTCACTCCCT +
Preference number: 6 (lower is better)
Translates to: CFSPTPLPAAQVLLL*LRQPQVGSLLLSLP
Trigger: AGGGAGTGAGAGCAGAAGGGAGCCCACCTGTGGTTGTCTCAGCAACAGCAGAAGAACCTGGGCCGCTGGGAGTGGAGTTGGAGAGAAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS GCA 72 bp GCCCTGCCCAGAAAATGGCCACTTCCGGAGCAAAACTaGCACAGCAACAGGCCTTGTCAACAGCAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: ALPRKWPLPEQN*HSNRPCQQQPP
Trigger: TGGAGGCTGCTGTTGACAAGGCCTGTTGCTGTGGCAGTTTTGCTCCGGAAGTGGCCATTTTCTGGGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600155.1
CDS GCA 72 bp GATGACCGGTACCAAACCTCGAGCACCAGGGTGCGATaGTTCGGCTGGGGAAGTCTGGCAGTCTTCAAGGTT +
Preference number: 6 (lower is better)
Translates to: DDRYQTSSTRVR*FGWGSLAVFKV
Trigger: AACCTTGAAGACTGCCAGACTTCCCCAGCCGAAGCATCGCACCCTGGTGCTCGAGGTTTGGTACCGGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596365.5
CDS CCA 72 bp TCCCGACAAAGGGAACAGCACATGCAAAGGCTCTGCTaGCAGCATGCCTGGTGTGTCCAAGGAAGAGCACGG +
Preference number: 6 (lower is better)
Translates to: SRQREQHMQRLC*QHAWCVQGRAR
Trigger: CCGTGCTCTTCCTTGGACACACCAGGCATGCTGCCAGCAGAGCCTTTGCATGTGCTGTTCCCTTTGTCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS CCA 72 bp GACAGATGGTGCTCTGGTGGAGCCCTGCCCAGAAAATaGCCACTTCCGGAGCAAAACTGCCACAGCAACAGG +
Preference number: 6 (lower is better)
Translates to: DRWCSGGALPRK*PLPEQNCHSNR
Trigger: CCTGTTGCTGTGGCAGTTTTGCTCCGGAAGTGGCCATTTTCTGGGCAGGGCTCCACCAGAGCACCATCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600155.1
CDS CCA 72 bp GACACTGGGGACATCAAAACGGATAACACATGGCCCTaGATCTCAAGGAACCTGCCGCCTCGAGCACCAGGG +
Preference number: 6 (lower is better)
Translates to: DTGDIKTDNTWP*ISRNLPPRAPG
Trigger: CCCTGGTGCTCGAGGCGGCAGGTTCCTTGAGATCCAGGGCCATGTGTTATCCGTTTTGATGTCCCCAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616030.4
CDS CAA 72 bp TCCTTCAGCACCTGGACCAGGCTGAGAGCGGTGACCTaGAGCACTAAGCAGGTGGTGGCTTCAAGATGGGCT +
Preference number: 6 (lower is better)
Translates to: SFSTWTRLRAVT*STKQVVASRWA
Trigger: AGCCCATCTTGAAGCCACCACCTGCTTAGTGCTCAAGGTCACCGCTCTCAGCCTGGTCCAGGTGCTGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601471.1
CDS TCA 72 bp TCAACAGGCTGCTCAAGAAGAAGCCACAGAAAGAGCTaGGCCTCAGCAGCTGAGCTCAGTGGACCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: STGCSRRSHRKS*ASAAELSGPQS
Trigger: GCTCTGGGGTCCACTGAGCTCAGCTGCTGAGGCTCAGCTCTTTCTGTGGCTTCTTCTTGAGCAGCCTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000620580.1
CDS TCA 72 bp CCCTTCCTACAAGCCTGCCCTGGACTCACCATCAGCTaGAATGAAGCAGGAAGTGGAGCAGGGGATCTGTGG +
Preference number: 6 (lower is better)
Translates to: PFLQACPGLTIS*NEAGSGAGDLW
Trigger: CCACAGATCCCCTGCTCCACTTCCTGCTTCATTTCAGCTGATGGTGAGTCCAGGGCAGGCTTGTAGGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 72 bp GGGTCAGGATACCATGGAGTCAGGAGGACTCCTGGGTaGCTAGTGCCACCACTCACTTGCAGTGTGACCTTG +
Preference number: 6 (lower is better)
Translates to: GSGYHGVRRTPG*LVPPLTCSVTL
Trigger: CAAGGTCACACTGCAAGTGAGTGGTGGCACTAGTCACCCAGGAGTCCTCCTGACTCCATGGTATCCTGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS GCA 72 bp GCTTCCCGACAAAGGGAACAGCACATGCAAAGGCTCTaGTGGCAGCATGCCTGGTGTGTCCAAGGAAGAGCA +
Preference number: 6 (lower is better)
Translates to: ASRQREQHMQRL*WQHAWCVQGRA
Trigger: TGCTCTTCCTTGGACACACCAGGCATGCTGCCAGCAGAGCCTTTGCATGTGCTGTTCCCTTTGTCGGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS CCA 72 bp TCTGGGGTCAGGATACCATGGAGTCAGGAGGACTCCTaGGTGACTAGTGCCACCACTCACTTGCAGTGTGAC +
Preference number: 6 (lower is better)
Translates to: SGVRIPWSQEDS*VTSATTHLQCD
Trigger: GTCACACTGCAAGTGAGTGGTGGCACTAGTCACCCAGGAGTCCTCCTGACTCCATGGTATCCTGACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 72 bp GAACTTCTGACTCAAGCCATCCTCCCACCTGCCTCCTaGGTAGCTGGAACCACAGGCACATCCCATCATGCT +
Preference number: 6 (lower is better)
Translates to: ELLTQAILPPAS*VAGTTGTSHHA
Trigger: AGCATGATGGGATGTGCCTGTGGTTCCAGCTACTCAGGAGGCAGGTGGGAGGATGGCTTGAGTCAGAAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 72 bp CCAGAGGCTGGAGGGCTACTGATGATTCCACGGAAGTaGCTGCATGCACCGATCCTAACCCCCGATAACTCT +
Preference number: 6 (lower is better)
Translates to: PEAGGLLMIPRK*LHAPILTPDNS
Trigger: AGAGTTATCGGGGGTTAGGATCGGTGCATGCAGTCACTTCCGTGGAATCATCAGTAGCCCTCCAGCCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 72 bp TCACTCATGCACAGATGGCCCTGTGGCCTCGTTTCCTaGGAACCCCAGAGGATGCAGAATCACTCTAGCCCT +
Preference number: 6 (lower is better)
Translates to: SLMHRWPCGLVS*EPQRMQNHSSP
Trigger: AGGGCTAGAGTGATTCTGCATCCTCTGGGGTTCTCAGGAAACGAGGCCACAGGGCCATCTGTGCATGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 72 bp GCCTTTTGGCTAAGATCAAGTGTGAGACTCCAGGGATaGCTCGGGTCTGGAAAATCGGGTCACTCCCACCCG +
Preference number: 6 (lower is better)
Translates to: AFWLRSSVRLQG*LGSGKSGHSHP
Trigger: CGGGTGGGAGTGACCCGATTTTCCAGACCCGAGTCATCCCTGGAGTCTCACACTTGATCTTAGCCAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622171.1
CDS GCA 72 bp GAGGAGAAAATTCGACCAAGTTCTCGAGCACCAGGGTaGGATGCTTCGGCTGGGGAAGTCTGGCAGTCTTCA +
Preference number: 6 (lower is better)
Translates to: EEKIRPSSRAPG*DASAGEVWQSS
Trigger: TGAAGACTGCCAGACTTCCCCAGCCGAAGCATCGCACCCTGGTGCTCGAGAACTTGGTCGAATTTTCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597626.5
CDS CAA 72 bp GTTGCTAGGACTAGGGCCCCAAATACATTAAGGCCCTaGATGGGGGAGTTAAGCCTGCCACCGTCCAGCGTT +
Preference number: 6 (lower is better)
Translates to: VARTRAPNTLRP*MGELSLPPSSV
Trigger: AACGCTGGACGGTGGCAGGCTTAACTCCCCCATCAAGGGCCTTAATGTATTTGGGGCCCTAGTCCTAGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CAA 90 bp GCCCAGGTGGCCATCCTCCACCTAAACAGGATCCTGCCAACATCATaGTACTGCCCAGCTTGCTACAGCACAGTGACAAGATGTGCTGGT +
Preference number: 6 (lower is better)
Translates to: AQVAILHLNRILPTS*YCPACYSTVTRCAG
Trigger: ACCAGCACATCTTGTCACTGTGCTGTAGCAAGCTGGGCAGTACAATGATGTTGGCAGGATCCTGTTTAGGTGGAGGATGGCCACCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400353.6
ENST00000427447.5
CDS TCA 72 bp CTCGGTCATCCCAACAACCCAGCCAGACTGTTCTTGTaGACACCCTTTCCAGAAATGGGGACAGTCTCGTGC +
Preference number: 6 (lower is better)
Translates to: LGHPNNPARLFL*TPFPEMGTVSC
Trigger: GCACGAGACTGTCCCCATTTCTGGAAAGGGTGTTCACAAGAACAGTCTGGCTGGGTTGTTGGGATGACCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000600155.1
CDS TCA 72 bp TCCAAGGAAGAGCACGGGGCTTGGAGCAGCACTAGATaGAGTCAAAGAGGTAGAAGGTCTGGAGGACTCGAG +
Preference number: 6 (lower is better)
Translates to: SKEEHGAWSSTR*SQRGRRSGGLE
Trigger: CTCGAGTCCTCCAGACCTTCTACCTCTTTGACTTCATCTAGTGCTGCTCCAAGCCCCGTGCTCTTCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS TCA 72 bp AGGATGGTCAGAAAGGCTTCACAGAGAAGGGGAATCTaGGCGAGGACGAAAGAGACAGCGGATGAGCTGAGC +
Preference number: 6 (lower is better)
Translates to: RMVRKASQRRGI*ARTKETADELS
Trigger: GCTCAGCTCATCCGCTGTCTCTTTCGTCCTCGCTCAGATTCCCCTTCTCTGTGAAGCCTTTCTGACCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS TCA 72 bp GTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCAT +
Preference number: 6 (lower is better)
Translates to: VYSSQRERRRRR*FLHFHLRYRVH
Trigger: ATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427447.5
ENST00000599421.1
CDS TCA 72 bp CCGAATAGGAACAGCTCTGGTCTACAGCTCCCAGCGTaGGCGACGCAGAAGACGGTGATTTCTGCATTTCCA +
Preference number: 6 (lower is better)
Translates to: PNRNSSGLQLPA*ATQKTVISAFP
Trigger: TGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCAGAGCTGTTCCTATTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427447.5
ENST00000599421.1
CDS TCA 72 bp GAGTGTGGCACCCACAGCTGTGTGGAATGCTGGAGCTaGCAATTTGCTTGGAGCTTCCAACAGGGAAATCGC +
Preference number: 6 (lower is better)
Translates to: ECGTHSCVECWS*QFAWSFQQGNR
Trigger: GCGATTTCCCTGTTGGAAGCTCCAAGCAAATTGTCAGCTCCAGCATTCCACACAGCTGTGGGTGCCACACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 72 bp AAAATTCATCCCGATGCCAGAGGCTTCCTCACAATGTaGGGAGATGGCGCCCCCTCGTGTCGAGATGATCCT +
Preference number: 6 (lower is better)
Translates to: KIHPDARGFLTM*GDGAPSCRDDP
Trigger: AGGATCATCTCGACACGAGGGGGCGCCATCTCCTCACATTGTGAGGAAGCCTCTGGCATCGGGATGAATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601471.1
CDS GCA 72 bp GAAGCAGTGGGACTCCCCACAGGGAAGAGGAGCCACTaGCTACTAAACATGCATGGTTTGTCTTCACAGTGG +
Preference number: 6 (lower is better)
Translates to: EAVGLPTGKRSH*LLNMHGLSSQW
Trigger: CCACTGTGAAGACAAACCATGCATGTTTAGTAGGCAGTGGCTCCTCTTCCCTGTGGGGAGTCCCACTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400353.6
ENST00000427447.5
ENST00000609132.1
CDS CCA 72 bp AGTGCAGGCGAAGAGCTGAGAGAGGGCATCAGAAAATaGACTCCGAATATAGGGAGTGGCATGGGCCACATC +
Preference number: 6 (lower is better)
Translates to: SAGEELREGIRK*TPNIGSGMGHI
Trigger: GATGTGGCCCATGCCACTCCCTATATTCGGAGTCCATTTTCTGATGCCCTCTCTCAGCTCTTCGCCTGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000620580.1
CDS CCA 72 bp GAGGAAGAGCCCAACAGTAATTCCTCATCTTGTGGCTaGACCTTGGGAGGACCCTTGGAATTCCCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: EEEPNSNSSSCG*TLGGPLEFPGR
Trigger: TCTCCCAGGGAATTCCAAGGGTCCTCCCAAGGTCCAGCCACAAGATGAGGAATTACTGTTGGGCTCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 72 bp TGCAGTGTGACCTTGGGGAAGCCACTGTTCCCTCGCTaGGCCTCCGTTTTCTTTCCAGTCCTAATTAAGGAC +
Preference number: 6 (lower is better)
Translates to: CSVTLGKPLFPR*ASVFFPVLIKD
Trigger: GTCCTTAATTAGGACTGGAAAGAAAACGGAGGCCCAGCGAGGGAACAGTGGCTTCCCCAAGGTCACACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 72 bp AAGTCTGACACTGGGGACATCAAAACGGATAACACATaGCCCTGGATCTCAAGGAACCTGCCGCCTCGAGCA +
Preference number: 6 (lower is better)
Translates to: KSDTGDIKTDNT*PWISRNLPPRA
Trigger: TGCTCGAGGCGGCAGGTTCCTTGAGATCCAGGGCCATGTGTTATCCGTTTTGATGTCCCCAGTGTCAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616030.4
CDS CAA 72 bp GACATCAGTGTGAACCAGATGGACCCCACACATGTCTaGGCACCTCAGAGGCCCCTGGAATGTGTGTGTGTA +
Preference number: 6 (lower is better)
Translates to: DISVNQMDPTHV*APQRPLECVCV
Trigger: TACACACACACATTCCAGGGGCCTCTGAGGTGCCAAGACATGTGTGGGGTCCATCTGGTTCACACTGATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 72 bp CATCGAATAAACACCATGGCCAGCCATAGAGACGCATaGTCACACTCGGTCATCCCAACAACCCAGCCAGAC +
Preference number: 6 (lower is better)
Translates to: HRINTMASHRDA*SHSVIPTTQPD
Trigger: GTCTGGCTGGGTTGTTGGGATGACCGAGTGTGATCATGCGTCTCTATGGCTGGCCATGGTGTTTATTCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000600155.1
CDS TCA 72 bp GAATTACAGTTCCCATCCCTGTTGGGTGGAACCAGATaGCATCCTAAAGGCCCTTCCTACTGGGACTCGCTC +
Preference number: 6 (lower is better)
Translates to: ELQFPSLLGGTR*HPKGPSYWDSL
Trigger: GAGCGAGTCCCAGTAGGAAGGGCCTTTAGGATGTCATCTGGTTCCACCCAACAGGGATGGGAACTGTAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000600155.1
CDS TCA 72 bp AGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTaGGGTACCGGGTTCATCTCTCTAGGGAGTGCCAGA +
Preference number: 6 (lower is better)
Translates to: SDAEDGDFCISI*GTGFISLGSAR
Trigger: TCTGGCACTCCCTAGAGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427447.5
ENST00000599421.1
CDS GCA 72 bp CCTTCCTACTGGGACTCGCTCCATCCTGGTAATACCTaGCATCGAATAAACACCATGGCCAGCCATAGAGAC +
Preference number: 6 (lower is better)
Translates to: PSYWDSLHPGNT*HRINTMASHRD
Trigger: GTCTCTATGGCTGGCCATGGTGTTTATTCGATGGCAGGTATTACCAGGATGGAGCGAGTCCCAGTAGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000600155.1
CDS GCA 72 bp AGTGAGACAGCGAGGTGGCGAGAAGTGAGTAGATTCTaGATGTCTTTGGAAGGCAGGGCCAAAGGATTTGCC +
Preference number: 6 (lower is better)
Translates to: SETARWREVSRF*MSLEGRAKGFA
Trigger: GGCAAATCCTTTGGCCCTGCCTTCCAAAGACATGCAGAATCTACTCACTTCTCGCCACCTCGCTGTCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS CCA 72 bp ACAGGGAGAGTGGGGAATTACAGTTCCCATCCCTGTTaGGTGGAACCAGATGACATCCTAAAGGCCCTTCCT +
Preference number: 6 (lower is better)
Translates to: TGRVGNYSSHPC*VEPDDILKALP
Trigger: AGGAAGGGCCTTTAGGATGTCATCTGGTTCCACCCAACAGGGATGGGAACTGTAATTCCCCACTCTCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000600155.1
CDS CCA 72 bp AAGTCTGACACTGGGGACATCAAAACGGATAACACATaGCCCTGGATCTCAAGGAACCTGCCGCCTGATGGA +
Preference number: 6 (lower is better)
Translates to: KSDTGDIKTDNT*PWISRNLPPDG
Trigger: TCCATCAGGCGGCAGGTTCCTTGAGATCCAGGGCCATGTGTTATCCGTTTTGATGTCCCCAGTGTCAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613667.1
CDS CAA 72 bp GGGAAGAGGAGCCACTGCCTACTAAACATGCATGGTTaGTCTTCACAGTGGACAGTTTGGTGGCCGCAGACA +
Preference number: 6 (lower is better)
Translates to: GKRSHCLLNMHG*SSQWTVWWPQT
Trigger: TGTCTGCGGCCACCAAACTGTCCACTGTGAAGACAAACCATGCATGTTTAGTAGGCAGTGGCTCCTCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400353.6
ENST00000427447.5
ENST00000594370.5
ENST00000594752.5
ENST00000595747.5
ENST00000600155.1
ENST00000609132.1
ENST00000616030.4
CDS CAA 72 bp GTCTCGGACCTCATGGAGCTCCCAGTCAGGTGCTGCTaGGACTTCTCGTGTCCTAATTTTCAAATAGCCCAC +
Preference number: 6 (lower is better)
Translates to: VSDLMELPVRCC*DFSCPNFQIAH
Trigger: GTGGGCTATTTGAAAATTAGGACACGAGAAGTCCAAGCAGCACCTGACTGGGAGCTCCATGAGGTCCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600155.1
CDS CAA 90 bp CTCCCCACAGGGAAGAGGAGCCACTGCCTACTAAACATGCATGGTTaGTCTTCACAGTGGACAGTTTGGTGGCCGCAGACATCATCTTCT +
Preference number: 6 (lower is better)
Translates to: LPTGKRSHCLLNMHG*SSQWTVWWPQTSSS
Trigger: AGAAGATGATGTCTGCGGCCACCAAACTGTCCACTGTGAAGACAAACCATGCATGTTTAGTAGGCAGTGGCTCCTCTTCCCTGTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400353.6
ENST00000427447.5
CDS CAA 90 bp AGGTTGTCTCGGACCTCATGGAGCTCCCAGTCTATCAGGTGCTGCTaGGACTTCTCGTGTCCTAATTTTCAAATAGCCCACAAGGCCCCA +
Preference number: 6 (lower is better)
Translates to: RLSRTSWSSQSIRCC*DFSCPNFQIAHKAP
Trigger: TGGGGCCTTGTGGGCTATTTGAAAATTAGGACACGAGAAGTCCAAGCAGCACCTGATAGACTGGGAGCTCCATGAGGTCCGAGACAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593977.1
CDS TCA 72 bp GACCACGATCTGATGGGTCATCGTTACTTGAAGGGGTaGGCAGAGGCTTCGCTTAACTTCCTTAAGGCTCTC +
Preference number: 6 (lower is better)
Translates to: DHDLMGHRYLKG*AEASLNFLKAL
Trigger: GAGAGCCTTAAGGAAGTTAAGCGAAGCCTCTGCTCACCCCTTCAAGTAACGATGACCCATCAGATCGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400353.6
ENST00000427447.5
CDS GCA 72 bp AGGAGTTCGCGATGTCTCATTAGTGGAGGCTGCCATTaGTGGGTAAGTGTCCTTGAGCAAATGGCTTACCTC +
Preference number: 6 (lower is better)
Translates to: RSSRCLISGGCH*WVSVLEQMAYL
Trigger: GAGGTAAGCCATTTGCTCAAGGACACTTACCCAGCAATGGCAGCCTCCACTAATGAGACATCGCGAACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS CCA 72 bp CAGCCAGACTGTTCTTGTGAACACCCTTTCCAGAAATaGGGACAGTCTCGTGCCAAGATGCCAAAATGGGTG +
Preference number: 6 (lower is better)
Translates to: QPDCSCEHPFQK*GQSRAKMPKWV
Trigger: CACCCATTTTGGCATCTTGGCACGAGACTGTCCCCATTTCTGGAAAGGGTGTTCACAAGAACAGTCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000600155.1
CDS CCA 72 bp AGAGGGCATCAGAAAATGGACTCCGAATATAGGGAGTaGCATGGGCCACATCTTGGTCAACAGGCTGCTCAA +
Preference number: 6 (lower is better)
Translates to: RGHQKMDSEYRE*HGPHLGQQAAQ
Trigger: TTGAGCAGCCTGTTGACCAAGATGTGGCCCATGCCACTCCCTATATTCGGAGTCCATTTTCTGATGCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000620580.1
CDS CCA 72 bp TGGACCCCACACATGTCTTGGCACCTCAGAGGCCCCTaGAATGTGTGTGTGTATATATGTGTGTGTGTGTGT +
Preference number: 6 (lower is better)
Translates to: WTPHMSWHLRGP*NVCVYICVCVC
Trigger: ACACACACACACACATATATACACACACACATTCCAGGGGCCTCTGAGGTGCCAAGACATGTGTGGGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CAA 72 bp TGGACTCCGAATATAGGGAGTGGCATGGGCCACATCTaGGTCAACAGGCTGCTCAAGAAGAAGCCACAGAAA +
Preference number: 6 (lower is better)
Translates to: WTPNIGSGMGHI*VNRLLKKKPQK
Trigger: TTTCTGTGGCTTCTTCTTGAGCAGCCTGTTGACCAAGATGTGGCCCATGCCACTCCCTATATTCGGAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000620580.1
CDS CAA 72 bp CGGACCTCATGGAGCTCCCAGTCTATCAGGTGCTGCTaGGACTTCTCGTGTCCTAATTTTCAAATAGCCCAC +
Preference number: 6 (lower is better)
Translates to: RTSWSSQSIRCC*DFSCPNFQIAH
Trigger: GTGGGCTATTTGAAAATTAGGACACGAGAAGTCCAAGCAGCACCTGATAGACTGGGAGCTCCATGAGGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593977.1
CDS CAA 90 bp ATCAGAAAATGGACTCCGAATATAGGGAGTGGCATGGGCCACATCTaGGTCAACAGGCTGCTCAAGAAGAAGCCACAGAAAGAGCTGAGC +
Preference number: 6 (lower is better)
Translates to: IRKWTPNIGSGMGHI*VNRLLKKKPQKELS
Trigger: GCTCAGCTCTTTCTGTGGCTTCTTCTTGAGCAGCCTGTTGACCAAGATGTGGCCCATGCCACTCCCTATATTCGGAGTCCATTTTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000620580.1
CDS CAA 90 bp CCAGAGGCCGGGATGACCAGTTTTCTGCTGACCACTTCTTTGTGGTaGAGTAAAAAGGCCTTCGCATTTCGGGATAGAACTGAGGTTCCT +
Preference number: 6 (lower is better)
Translates to: PEAGMTSFLLTTSLW*SKKAFAFRDRTEVP
Trigger: AGGAACCTCAGTTCTATCCCGAAATGCGAAGGCCTTTTTACTCAACCACAAAGAAGTGGTCAGCAGAAAACTGGTCATCCCGGCCTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000593977.1
ENST00000600155.1
ENST00000608431.1
CDS GCA 72 bp TTACCAAGTGGAACAGGAGACTCCGAAGAGTTCATGTaGTTTTCCGAAGAAGTGTCCAAAGGCACGGCAGAG +
Preference number: 6 (lower is better)
Translates to: LPSGTGDSEEFM*FSEEVSKGTAE
Trigger: CTCTGCCGTGCCTTTGGACACTTCTTCGGAAAAGCACATGAACTCTTCGGAGTCTCCTGTTCCACTTGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609132.1
CDS CCA 72 bp TTAGAGTTTCAAAATAGAGACAGCAGGGCATGCAGCTaGCCACACCGTCAGCATTTTAGGAGTCAGGGACAC +
Preference number: 6 (lower is better)
Translates to: LEFQNRDSRACS*PHRQHFRSQGH
Trigger: GTGTCCCTGACTCCTAAAATGCTGACGGTGTGGCCAGCTGCATGCCCTGCTGTCTCTATTTTGAAACTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS CCA 72 bp AAAGAGCTGTCTGAAGCCCACTTTGGGGAGTCAATGTaGAATCAGGGTAGAAGATTCTTGATGCCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: KELSEAHFGESM*NQGRRFLMPRW
Trigger: CCACCTGGGCATCAAGAATCTTCTACCCTGATTCCACATTGACTCCCCAAAGTGGGCTTCAGACAGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400353.6
ENST00000427447.5
CDS CCA 72 bp AGGAAATGGGTTCTCCCAGAGCCTCCACGGGGATCTTaGTCCTACCAACATCTTGATTTTAGCCCAACGAAA +
Preference number: 6 (lower is better)
Translates to: RKWVLPEPPRGS*SYQHLDFSPTK
Trigger: TTTCGTTGGGCTAAAATCAAGATGTTGGTAGGACCAAGATCCCCGTGGAGGCTCTGGGAGAACCCATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CAA 72 bp GAGGCCGGGATGACCAGTTTTCTGCTGACCACTTCTTaGTGGTTGAGTAAAAAGGCCTTCGCATTTCGGGAT +
Preference number: 6 (lower is better)
Translates to: EAGMTSFLLTTS*WLSKKAFAFRD
Trigger: ATCCCGAAATGCGAAGGCCTTTTTACTCAACCACAAAGAAGTGGTCAGCAGAAAACTGGTCATCCCGGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000593977.1
ENST00000600155.1
ENST00000608431.1
CDS TCA 72 bp CATGGAGCTCCCAGTCTATCTCGAATCCTCCATATGTaGGGAGTTCCTGGCATAGTCCCCATCATACACATA +
Preference number: 6 (lower is better)
Translates to: HGAPSLSRILHM*GVPGIVPIIHI
Trigger: TATGTGTATGATGGGGACTATGCCAGGAACTCCTCACATATGGAGGATTCGAGATAGACTGGGAGCTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620580.1
CDS GCA 72 bp AACAGGATCCTGCCAACATCATTGTACTGCCCAGCTTaGTACAGCACAGTGACAAGATGTGCTGGTGATATC +
Preference number: 6 (lower is better)
Translates to: NRILPTSLYCPA*YSTVTRCAGDI
Trigger: GATATCACCAGCACATCTTGTCACTGTGCTGTAGCAAGCTGGGCAGTACAATGATGTTGGCAGGATCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400353.6
ENST00000427447.5
CDS GCA 72 bp CAGAAGCACAAGACCCCTAGCCAGAAGATGACAGCATaGCAGAGCTTAGTGTCACCAAGCTTTCCTTTCTAT +
Preference number: 6 (lower is better)
Translates to: QKHKTPSQKMTA*QSLVSPSFPFY
Trigger: ATAGAAAGGAAAGCTTGGTGACACTAAGCTCTGGCATGCTGTCATCTTCTGGCTAGGGGTCTTGTGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400353.6
ENST00000427447.5
CDS GCA 72 bp TGGGGGAAGAGGTCAACAATCAAGGAATGCAAGGAATaGAGCATTAGAAGCTGGCAAAGGCAAGGAAATGGG +
Preference number: 6 (lower is better)
Translates to: WGKRSTIKECKE*SIRSWQRQGNG
Trigger: CCCATTTCCTTGCCTTTGCCAGCTTCTAATGCTGCATTCCTTGCATTCCTTGATTGTTGACCTCTTCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS GCA 72 bp TGTAGAAGGAAAGCTCTAGAACAAAATTCATCCCGATaGCAGAGGCTTCCTCACAATGTGAGGAGATGGCGC +
Preference number: 6 (lower is better)
Translates to: CRRKALEQNSSR*QRLPHNVRRWR
Trigger: GCGCCATCTCCTCACATTGTGAGGAAGCCTCTGGCATCGGGATGAATTTTGTTCTAGAGCTTTCCTTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601471.1
CDS CCA 72 bp ACAATCAAGGAATGCAAGGAATGCAGCATTAGAAGCTaGCAAAGGCAAGGAAATGGGTTCTCCCAGAGCCTC +
Preference number: 6 (lower is better)
Translates to: TIKECKECSIRS*QRQGNGFSQSL
Trigger: GAGGCTCTGGGAGAACCCATTTCCTTGCCTTTGCCAGCTTCTAATGCTGCATTCCTTGCATTCCTTGATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 72 bp AGCCTGACCCCTGGGACCTGTGAATATTTCCCTCTGTaGCAAAAGAGACTTTGCAGAAGAGACCAAGTCAAA +
Preference number: 6 (lower is better)
Translates to: SLTPGTCEYFPL*QKRLCRRDQVK
Trigger: TTTGACTTGGTCTCTTCTGCAAAGTCTCTTTTGCCACAGAGGGAAATATTCACAGGTCCCAGGGGTCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 72 bp TTTAAAAGGAAAAGGAGTGTGGCACCCACAGCTGTGTaGAATGCTGGAGCTGACAATTTGCTTGGAGCTTCC +
Preference number: 6 (lower is better)
Translates to: FKRKRSVAPTAV*NAGADNLLGAS
Trigger: GGAAGCTCCAAGCAAATTGTCAGCTCCAGCATTCCACACAGCTGTGGGTGCCACACTCCTTTTCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 72 bp GTTACCATGACAGGAGACAAACACATGGCAGTTCACTaGGTGATAGTGAACAGGTGTGCCTTTGGGTATTCC +
Preference number: 6 (lower is better)
Translates to: VTMTGDKHMAVH*VIVNRCAFGYS
Trigger: GGAATACCCAAAGGCACACCTGTTCACTATCACCCAGTGAACTGCCATGTGTTTGTCTCCTGTCATGGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 72 bp GCCGGGATGACCAGTTTTCTGCTGACCACTTCTTTGTaGTTGAGTAAAAAGGCCTTCGCATTTCGGGATAGA +
Preference number: 6 (lower is better)
Translates to: AGMTSFLLTTSL*LSKKAFAFRDR
Trigger: TCTATCCCGAAATGCGAAGGCCTTTTTACTCAACCACAAAGAAGTGGTCAGCAGAAAACTGGTCATCCCGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000593977.1
ENST00000600155.1
ENST00000608431.1
CDS CAA 72 bp TTGTTAGGGTTTGACATAAGCGACTCCATTCTGATATaGAGAACCCCCACAAAGGAAAGGACCCCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: LLGFDISDSILI*RTPTKERTPRS
Trigger: GCTCCTGGGGGTCCTTTCCTTTGTGGGGGTTCTCAATATCAGAATGGAGTCGCTTATGTCAAACCCTAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000620580.1
CDS CAA 90 bp CCACTGCCTACTAAACATGCATGGTTTGTCTTCACAGTGGACAGTTaGGTGGCCGCAGACATCATCTTCTACAACCACATCTACATCCTT +
Preference number: 6 (lower is better)
Translates to: PLPTKHAWFVFTVDS*VAADIIFYNHIYIL
Trigger: AAGGATGTAGATGTGGTTGTAGAAGATGATGTCTGCGGCCACCAAACTGTCCACTGTGAAGACAAACCATGCATGTTTAGTAGGCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000400353.6
ENST00000427447.5
ENST00000593977.1
ENST00000594370.5
ENST00000594752.5
ENST00000595747.5
ENST00000600155.1
ENST00000616030.4
ENST00000620580.1
CDS TCA 72 bp CCCAGCTTGCTACAGCACAGTGACAAGATGTGCTGGTaGTATCTTTCAGTGGAGATTGTACTTTGCACTGGA +
Preference number: 6 (lower is better)
Translates to: PSLLQHSDKMCW*YLSVEIVLCTG
Trigger: TCCAGTGCAAAGTACAATCTCCACTGAAAGATATCACCAGCACATCTTGTCACTGTGCTGTAGCAAGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400353.6
ENST00000427447.5
CDS GCA 72 bp CACAGGGGCTCAGTTTGGGACACTTTAAGTCTGAGATaGCTCTTAGTGGTTCAAATAGAGGTACAGGGTAGA +
Preference number: 6 (lower is better)
Translates to: HRGSVWDTLSLR*LLVVQIEVQGR
Trigger: TCTACCCTGTACCTCTATTTGAACCACTAAGAGGCATCTCAGACTTAAAGTGTCCCAAACTGAGCCCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS GCA 72 bp GGGAGATTTGACAGTAAAGAAGGCAATGAAACAAGGTaGTGTTCTGCTGGCTTTGAAGATGGGGGAAGAGGT +
Preference number: 6 (lower is better)
Translates to: GRFDSKEGNETR*CSAGFEDGGRG
Trigger: ACCTCTTCCCCCATCTTCAAAGCCAGCAGAACAGCACCTTGTTTCATTGCCTTCTTTACTGTCAAATCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS GCA 72 bp TTGTCTCGGACCTCATGGAGCTCCCAGTCTATCAGGTaGTGCTTGGACTTCTCGTGTCCTAATTTTCAAATA +
Preference number: 6 (lower is better)
Translates to: LSRTSWSSQSIR*CLDFSCPNFQI
Trigger: TATTTGAAAATTAGGACACGAGAAGTCCAAGCAGCACCTGATAGACTGGGAGCTCCATGAGGTCCGAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593977.1
CDS CAA 72 bp GAGACAGGATCTCCACAAAAGGAGCTTATTTGGGAATaGCAGGGGATTGCAACCTGGGAAACATGTGCTATG +
Preference number: 6 (lower is better)
Translates to: ETGSPQKELIWE*QGIATWETCAM
Trigger: CATAGCACATGTTTCCCAGGTTGCAATCCCCTGCAATTCCCAAATAAGCTCCTTTTGTGGAGATCCTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS CAA 90 bp AAGTCACGCAGCAAGTCAGTGGAGCTGGAATTCACACTCTGGCTTTaGGATTCTAAGCCTCATATTCTTTCTGTTACACCATGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: KSRSKSVELEFTLWL*DSKPHILSVTPCCF
Trigger: GAAGCAGCATGGTGTAACAGAAAGAATATGAGGCTTAGAATCCAAAAGCCAGAGTGTGAATTCCAGCTCCACTGACTTGCTGCGTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CAA 90 bp AGGGCCATTACACTGATAGTCTACTCTGGCCTCTGTGACCAGAATTaGTTCTTGTGGAATGTAGCCGGAGAATCTACAAGTGAAAACGCA +
Preference number: 6 (lower is better)
Translates to: RAITLIVYSGLCDQN*FLWNVAGESTSENA
Trigger: TGCGTTTTCACTTGTAGATTCTCCGGCTACATTCCACAAGAACAAATTCTGGTCACAGAGGCCAGAGTAGACTATCAGTGTAATGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 72 bp CAACATCATTGTACTGCCCAGCTTGCTACAGCACAGTaGCAAGATGTGCTGGTGATATCTTTCAGTGGAGAT +
Preference number: 6 (lower is better)
Translates to: QHHCTAQLATAQ*QDVLVISFSGD
Trigger: ATCTCCACTGAAAGATATCACCAGCACATCTTGTCACTGTGCTGTAGCAAGCTGGGCAGTACAATGATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400353.6
ENST00000427447.5
CDS GCA 72 bp TGCCTTAAATCCAACTCATGCCGAGATTTCCAGGTTTaGTTTGAGGAATCCACTGCACTGATGGTGACTTGT +
Preference number: 6 (lower is better)
Translates to: CLKSNSCRDFQV*FEESTALMVTC
Trigger: ACAAGTCACCATCAGTGCAGTGGATTCCTCAAAGCAAACCTGGAAATCTCGGCATGAGTTGGATTTAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000400353.6
ENST00000427447.5
ENST00000593977.1
ENST00000594370.5
ENST00000594752.5
ENST00000595747.5
ENST00000596365.5
ENST00000600155.1
ENST00000613667.1
ENST00000616030.4
ENST00000620580.1
ENST00000628906.2
CDS CCA 72 bp CTAAACATGCATGGTTTGTCTTCACAGTGGACAGTTTaGTGGCCGCAGACATCATCTTCTACAACCACATCT +
Preference number: 6 (lower is better)
Translates to: LNMHGLSSQWTV*WPQTSSSTTTS
Trigger: AGATGTGGTTGTAGAAGATGATGTCTGCGGCCACCAAACTGTCCACTGTGAAGACAAACCATGCATGTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000400353.6
ENST00000427447.5
ENST00000593977.1
ENST00000594370.5
ENST00000594752.5
ENST00000595747.5
ENST00000596365.5
ENST00000600155.1
ENST00000616030.4
ENST00000620580.1
CDS CCA 72 bp GTCTACTCTGGCCTCTGTGACCAGAATTTGTTCTTGTaGAATGTAGCCGGAGAATCTACAAGTGAAAACGCA +
Preference number: 6 (lower is better)
Translates to: VYSGLCDQNLFL*NVAGESTSENA
Trigger: TGCGTTTTCACTTGTAGATTCTCCGGCTACATTCCACAAGAACAAATTCTGGTCACAGAGGCCAGAGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CAA 72 bp ACTAAACATGCATGGTTTGTCTTCACAGTGGACAGTTaGGTGGCCGCAGACATCATCTTCTACAACCACATC +
Preference number: 6 (lower is better)
Translates to: TKHAWFVFTVDS*VAADIIFYNHI
Trigger: GATGTGGTTGTAGAAGATGATGTCTGCGGCCACCAAACTGTCCACTGTGAAGACAAACCATGCATGTTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000400353.6
ENST00000427447.5
ENST00000593977.1
ENST00000594370.5
ENST00000594752.5
ENST00000595747.5
ENST00000596365.5
ENST00000600155.1
ENST00000616030.4
ENST00000620580.1
CDS CAA 72 bp GGACGTGACCAGACTGCCTTATTGAAAACAAGGGACTaGTGTGTGTCTTCTCTTCCCATTAACATCCCAACT +
Preference number: 6 (lower is better)
Translates to: GRDQTALLKTRD*CVSSLPINIPT
Trigger: AGTTGGGATGTTAATGGGAAGAGAAGACACACACAAGTCCCTTGTTTTCAATAAGGCAGTCTGGTCACGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CAA 72 bp GGGATGACCAGTTTTCTGCTGACCACTTCTTTGTGGTaGAGTAAAAAGGCCTTCGCATTTCGGGATAGAACT +
Preference number: 6 (lower is better)
Translates to: GMTSFLLTTSLW*SKKAFAFRDRT
Trigger: AGTTCTATCCCGAAATGCGAAGGCCTTTTTACTCAACCACAAAGAAGTGGTCAGCAGAAAACTGGTCATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000593977.1
ENST00000600155.1
ENST00000608431.1
CDS CAA 90 bp TTGACAGTAAAGAAGGCAATGAAACAAGGTGCTGTTCTGCTGGCTTaGAAGATGGGGGAAGAGGTCAACAATCAAGGAATGCAAGGAATG +
Preference number: 6 (lower is better)
Translates to: LTVKKAMKQGAVLLA*KMGEEVNNQGMQGM
Trigger: CATTCCTTGCATTCCTTGATTGTTGACCTCTTCCCCCATCTTCAAAGCCAGCAGAACAGCACCTTGTTTCATTGCCTTCTTTACTGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CAA 90 bp GATGAGAGGGTAATAGAGTACACAGTGAGTCAACCTAACATGCATTaGATGGCGGTATCAAAAGAAGTAAAAGGAGGGAAGGCCCAGAAG +
Preference number: 6 (lower is better)
Translates to: DERVIEYTVSQPNMH*MAVSKEVKGGKAQK
Trigger: CTTCTGGGCCTTCCCTCCTTTTACTTCTTTTGATACCGCCATCAAATGCATGTTAGGTTGACTCACTGTGTACTCTATTACCCTCTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CAA 90 bp ATTACACTGATAGTCTACTCTGGCCTCTGTGACCAGAATTTGTTCTaGTGGAATGTAGCCGGAGAATCTACAAGTGAAAACGCAAGGCGT +
Preference number: 6 (lower is better)
Translates to: ITLIVYSGLCDQNLF*WNVAGESTSENARR
Trigger: ACGCCTTGCGTTTTCACTTGTAGATTCTCCGGCTACATTCCACAAGAACAAATTCTGGTCACAGAGGCCAGAGTAGACTATCAGTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 72 bp GGCCAAAGGATTTGCCTACACATTGAATATGGCATGTaGGCAATAGAGAGGGGTCAAGAAAGCTCCAAAGTT +
Preference number: 6 (lower is better)
Translates to: GQRICLHIEYGM*AIERGQESSKV
Trigger: AACTTTGGAGCTTTCTTGACCCCTCTCTATTGCTCACATGCCATATTCAATGTGTAGGCAAATCCTTTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381181.1
CDS TCA 72 bp GTTGACAATAACCATTTCCCAGCTTTTAGAAAGAGGTaGCAGAGCTCTGTTGTAGTGTCTGAGCCACAACTC +
Preference number: 6 (lower is better)
Translates to: VDNNHFPAFRKR*QSSVVVSEPQL
Trigger: GAGTTGTGGCTCAGACACTACAACAGAGCTCTGTCACCTCTTTCTAAAAGCTGGGAAATGGTTATTGTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427447.5
ENST00000599421.1
CDS TCA 72 bp GTGTCTTCTCTTCCCATTAACATCCCAACTGCCTGGTaGACAACCAGCTCGAGGAAAAGAAAAAGGAGATTT +
Preference number: 6 (lower is better)
Translates to: VSSLPINIPTAW*TTSSRKRKRRF
Trigger: AAATCTCCTTTTTCTTTTCCTCGAGCTGGTTGTTCACCAGGCAGTTGGGATGTTAATGGGAAGAGAAGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 72 bp CAGGGAAATCGCTGCTTGATGACTGGTGTAGACCCATaGTCTAGCTACTCTATTCAAAGAAATAGTCGGCAA +
Preference number: 6 (lower is better)
Translates to: QGNRCLMTGVDP*SSYSIQRNSRQ
Trigger: TTGCCGACTATTTCTTTGAATAGAGTAGCTAGATCATGGGTCTACACCAGTCATCAAGCAGCGATTTCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 72 bp GACAACCAACTAAACATCCAGGAAAACATGACGCCATaGGTAGGGCTAGCAGACAAAAGAAACAGACTCACA +
Preference number: 6 (lower is better)
Translates to: DNQLNIQENMTP*VGLADKRNRLT
Trigger: TGTGAGTCTGTTTCTTTTGTCTGCTAGCCCTACTCATGGCGTCATGTTTTCCTGGATGTTTAGTTGGTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 72 bp TCTGGTGGTTCAATAGTTCAGCAGCTCCACATTGGTTaGATTCCTATTGTGTTCCCAGGCATTAAGTCTGAC +
Preference number: 6 (lower is better)
Translates to: SGGSIVQQLHIG*IPIVFPGIKSD
Trigger: GTCAGACTTAATGCCTGGGAACACAATAGGAATTCAACCAATGTGGAGCTGCTGAACTATTGAACCACCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613667.1
ENST00000616030.4
CDS TCA 72 bp ATCTTTAGCTTTTATGTTCTGCCAGTGAGAGGGCATTaGGTTTGTAGATTCCCAGGCATGACTGAAGCCAAG +
Preference number: 6 (lower is better)
Translates to: IFSFYVLPVRGH*VCRFPGMTEAK
Trigger: CTTGGCTTCAGTCATGCCTGGGAATCTACAAACTCAATGCCCTCTCACTGGCAGAACATAAAAGCTAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628906.2
CDS CAA 72 bp GCATATAGGCTCCAATTCGTGACCTCCACCTCCATTTaGTTAGGGTTTGACATAAGCGACTCCATTCTGATA +
Preference number: 6 (lower is better)
Translates to: AYRLQFVTSTSI*LGFDISDSILI
Trigger: TATCAGAATGGAGTCGCTTATGTCAAACCCTAACAAAATGGAGGTGGAGGTCACGAATTGGAGCCTATATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381181.1
ENST00000620580.1
CDS CAA 72 bp GATGTGCTGGTGATATCTTTCAGTGGAGATTGTACTTaGCACTGGACAAGTCCTCATAGATGCCGAACTCAT +
Preference number: 6 (lower is better)
Translates to: DVLVISFSGDCT*HWTSPHRCRTH
Trigger: ATGAGTTCGGCATCTATGAGGACTTGTCCAGTGCAAAGTACAATCTCCACTGAAAGATATCACCAGCACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400353.6
ENST00000427447.5
CDS CAA 72 bp ACACTGATAGTCTACTCTGGCCTCTGTGACCAGAATTaGTTCTTGTGGAATGTAGCCGGAGAATCTACAAGT +
Preference number: 6 (lower is better)
Translates to: TLIVYSGLCDQN*FLWNVAGESTS
Trigger: ACTTGTAGATTCTCCGGCTACATTCCACAAGAACAAATTCTGGTCACAGAGGCCAGAGTAGACTATCAGTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS GCA 72 bp AGTCATAAAATGAGTAAACAGAGACACGTAATGACTTaGTTCAAGTCACGCAGCAAGTCAGTGGAGCTGGAA +
Preference number: 6 (lower is better)
Translates to: SHKMSKQRHVMT*FKSRSKSVELE
Trigger: TTCCAGCTCCACTGACTTGCTGCGTGACTTGAAGCAAGTCATTACGTGTCTCTGTTTACTCATTTTATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CAA 72 bp TTTACCTGTAAAAACTCCACTCTGGTTAGTTACTGCTaGGACATGATACCACAGCATTACCTGAGAGGTCAC +
Preference number: 6 (lower is better)
Translates to: FTCKNSTLVSYC*DMIPQHYLRGH
Trigger: GTGACCTCTCAGGTAATGCTGTGGTATCATGTCCAAGCAGTAACTAACCAGAGTGGAGTTTTTACAGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400353.6
ENST00000427447.5
CDS TCA 72 bp GCTGTTTCACTGTTTTGTATTCCGTTTCACGGTTGTTaGGAGCAATCCATGCATGAAGTAGGACATAGATGT +
Preference number: 6 (lower is better)
Translates to: AVSLFCIPFHGC*EQSMHEVGHRC
Trigger: ACATCTATGTCCTACTTCATGCATGGATTGCTCTCAACAACCGTGAAACGGAATACAAAACAGTGAAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594370.5
CDS CCA 72 bp TCCTGGGTTAAACAAATTCCAGAAAATAGTCTAACTTaGCTCTGTGTGGGTGTAACCCACCAATCTTGCTTT +
Preference number: 6 (lower is better)
Translates to: SWVKQIPENSLT*LCVGVTHQSCF
Trigger: AAAGCAAGATTGGTGGGTTACACCCACACAGAGCCAAGTTAGACTATTTTCTGGAATTTGTTTAACCCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613667.1
ENST00000616030.4
CDS GCA 72 bp GTGTTTTTCCATTCGCCTACTGGAGGACATCTTGGTTaGTTCCAAGTTTTGACAACTATGAATAAAGCAGTT +
Preference number: 6 (lower is better)
Translates to: VFFHSPTGGHLG*FQVLTTMNKAV
Trigger: AACTGCTTTATTCATAGTTGTCAAAACTTGGAAGCAACCAAGATGTCCTCCAGTAGGCGAATGGAAAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595747.5
CDS CCA 72 bp ATCAGGTCTCTAAGTGGTAAACATAATTTTCCCACATaGGAGACACTAATCCACATCATGCTGAAAGCAAAG +
Preference number: 6 (lower is better)
Translates to: IRSLSGKHNFPT*ETLIHIMLKAK
Trigger: CTTTGCTTTCAGCATGATGTGGATTAGTGTCTCCCATGTGGGAAAATTATGTTTACCACTTAGAGACCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 72 bp TTTGTTCTTGTGGAATGTAGCCGGAGAATCTACAAGTaGAAACGCAAGGCGTTGTTTTCACCAAGATATAAA +
Preference number: 6 (lower is better)
Translates to: FVLVECSRRIYK*KRKALFSPRYK
Trigger: TTTATATCTTGGTGAAAACAACGCCTTGCGTTTTCACTTGTAGATTCTCCGGCTACATTCCACAAGAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 72 bp ATTTTTAACTCCTCAGGAACCCCTAGAATGGTAAACTaGGAAGTCACCTCATTTAACTTAACAAGGAATCTG +
Preference number: 6 (lower is better)
Translates to: IFNSSGTPRMVN*EVTSFNLTRNL
Trigger: CAGATTCCTTGTTAAGTTAAATGAGGTGACTTCCCAGTTTACCATTCTAGGGGTTCCTGAGGAGTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400353.6
ENST00000427447.5
CDS CAA 72 bp TCGCCTACTGGAGGACATCTTGGTTGCTTCCAAGTTTaGACAACTATGAATAAAGCAGTTATAAAATCCTGT +
Preference number: 6 (lower is better)
Translates to: SPTGGHLGCFQV*TTMNKAVIKSC
Trigger: ACAGGATTTTATAACTGCTTTATTCATAGTTGTCAAAACTTGGAAGCAACCAAGATGTCCTCCAGTAGGCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595747.5
CDS CAA 90 bp TTTTTCCATTCGCCTACTGGAGGACATCTTGGTTGCTTCCAAGTTTaGACAACTATGAATAAAGCAGTTATAAAATCCTGTGTAGGTTTC +
Preference number: 6 (lower is better)
Translates to: FFHSPTGGHLGCFQV*TTMNKAVIKSCVGF
Trigger: GAAACCTACACAGGATTTTATAACTGCTTTATTCATAGTTGTCAAAACTTGGAAGCAACCAAGATGTCCTCCAGTAGGCGAATGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595747.5
CDS TCA 72 bp GGATTAGACAATAGGGTACGAAAGAGAACATGTCATTaGCTTGTACTTATCTCTCAAACTATCCAATGGAAA +
Preference number: 6 (lower is better)
Translates to: GLDNRVRKRTCH*LVLISQTIQWK
Trigger: TTTCCATTGGATAGTTTGAGAGATAAGTACAAGTCAATGACATGTTCTCTTTCGTACCCTATTGTCTAATCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CAA 72 bp AAGAGAATAAATGCATGTTGTTTTAAGTCCACACGTTaGTGGTGCTATATTACAGAGGCAATAGGAAAGTCA +
Preference number: 6 (lower is better)
Translates to: KRINACCFKSTR*WCYITEAIGKS
Trigger: TGACTTTCCTATTGCCTCTGTAATATAGCACCACAAACGTGTGGACTTAAAACAACATGCATTTATTCTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS TCA 72 bp AAAGAGACTTTGCAGAAGAGACCAAGTCAAAGATCTTaGGATAAAGATATTATTCTGGATTATCACAGCTTC +
Preference number: 6 (lower is better)
Translates to: KETLQKRPSQRS*DKDIILDYHSF
Trigger: GAAGCTGTGATAATCCAGAATAATATCTTTATCTCAAGATCTTTGACTTGGTCTCTTCTGCAAAGTCTCTTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5
CDS CCA 72 bp GACCAAGTCAAAGATCTTGAGATAAAGATATTATTCTaGATTATCACAGCTTCTAAATGCAACCACAAGTGT +
Preference number: 6 (lower is better)
Translates to: DQVKDLEIKILF*IITASKCNHKC
Trigger: ACACTTGTGGTTGCATTTAGAAGCTGTGATAATCCAGAATAATATCTTTATCTCAAGATCTTTGACTTGGTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427447.5