Pregenerated sensors for LINC00642 (Homo sapiens)
Ensembl gene IDs: ENSG00000233208Ensembl transcript IDs: ENST00000419459.1, ENST00000442515.5, ENST00000444942.2, ENST00000653766.1, ENST00000654220.1, ENST00000654358.1, ENST00000654381.1, ENST00000655041.1, ENST00000656418.1, ENST00000657082.1, ENST00000658034.1, ENST00000658892.1, ENST00000659099.1, ENST00000660562.1, ENST00000661823.1, ENST00000663564.1, ENST00000663901.1, ENST00000666767.1, ENST00000666845.1, ENST00000668126.1
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCGGCCTTCACCTTCATTGGCTGCCGGTCCTGCCACTCCAGACCCTaGTCTGGGGCTCTGCCTTTCGCCGCAGGTTCTCCCGCAGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: SAFTFIGCRSCHSRP*SGALPFAAGSPAEG Trigger: CCCCTCTGCGGGAGAACCTGCGGCGAAAGGCAGAGCCCCAGAGCAGGGTCTGGAGTGGCAGGACCGGCAGCCAATGAAGGTGAAGGCCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660562.1 |
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| CDS GCA 90 bp | TCATTGGCTGCCGGTCCTGCCACTCCAGACCCTGCTCTGGGGCTCTaGCTTTCGCCGCAGGTTCTCCCGCAGAGGGGGTCATTGGTCACC | + |
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Preference number: 5 (lower is better) Translates to: SLAAGPATPDPALGL*LSPQVLPQRGSLVT Trigger: GGTGACCAATGACCCCCTCTGCGGGAGAACCTGCGGCGAAAGGCAGAGCCCCAGAGCAGGGTCTGGAGTGGCAGGACCGGCAGCCAATGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660562.1 |
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| CDS CCA 90 bp | GCTTGCAGGCTGCTGATTGGCTGCCCTGGGACTGGGGCTTCCCTCTaGTCCAATCAGCTATCACCAGGGAGGTGGCGTCCTCCTCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ACRLLIGCPGTGASL*SNQLSPGRWRPPPW Trigger: CCAGGGAGGAGGACGCCACCTCCCTGGTGATAGCTGATTGGACCAGAGGGAAGCCCCAGTCCCAGGGCAGCCAATCAGCAGCCTGCAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
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| CDS CCA 90 bp | CTTCACCTTCATTGGCTGCCGGTCCTGCCACTCCAGACCCTGCTCTaGGGCTCTGCCTTTCGCCGCAGGTTCTCCCGCAGAGGGGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: LHLHWLPVLPLQTLL*GSAFRRRFSRRGGH Trigger: ATGACCCCCTCTGCGGGAGAACCTGCGGCGAAAGGCAGAGCCCCAGAGCAGGGTCTGGAGTGGCAGGACCGGCAGCCAATGAAGGTGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660562.1 |
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| CDS TCA 90 bp | GGGGCGCCTAAGGCCACACAGCAGGGCTGCGCCGGCGCGCATGGCTaGGAAGCAGGTTCCAGGAGTTTCTGGGAGTTCTTGCTCAACATC | + |
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Preference number: 5 (lower is better) Translates to: GAPKATQQGCAGAHG*EAGSRSFWEFLLNI Trigger: GATGTTGAGCAAGAACTCCCAGAAACTCCTGGAACCTGCTTCTCAGCCATGCGCGCCGGCGCAGCCCTGCTGTGTGGCCTTAGGCGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653766.1 |
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| CDS TCA 90 bp | CAGAACTCCCCCTCCAGGCCATCTCATTGGCTGCTTGCAGGCTGCTaGTTGGCTGCCCTGGGACTGGGGCTTCCCTCTGGTCCAATCAGC | + |
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Preference number: 5 (lower is better) Translates to: QNSPSRPSHWLLAGC*LAALGLGLPSGPIS Trigger: GCTGATTGGACCAGAGGGAAGCCCCAGTCCCAGGGCAGCCAATCAGCAGCCTGCAAGCAGCCAATGAGATGGCCTGGAGGGGGAGTTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
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| CDS TCA 90 bp | GCATCGTTTGAAGGGCTCTGGAGCCAGCCGCCTGGGTTCGAATCCTaGCTGTCCCCCTCACCAGGTCCGTGGCCTTGGCCATCACTCAAC | + |
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Preference number: 5 (lower is better) Translates to: ASFEGLWSQPPGFES*LSPSPGPWPWPSLN Trigger: GTTGAGTGATGGCCAAGGCCACGGACCTGGTGAGGGGGACAGTCAGGATTCGAACCCAGGCGGCTGGCTCCAGAGCCCTTCAAACGATGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660562.1 |
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| CDS GCA 90 bp | TGTGATTGGGCAGAACTCCCCCTCCAGGCCATCTCATTGGCTGCTTaGAGGCTGCTGATTGGCTGCCCTGGGACTGGGGCTTCCCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: CDWAELPLQAISLAA*RLLIGCPGTGASLW Trigger: CCAGAGGGAAGCCCCAGTCCCAGGGCAGCCAATCAGCAGCCTGCAAGCAGCCAATGAGATGGCCTGGAGGGGGAGTTCTGCCCAATCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
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| CDS TCA 90 bp | GGGGTCTGCGAGGAGGACGTTCATGGGCGAGTGTGTGGTGGTGGGTaGACTGCGGCAGAACCCGAGATTAACAGCTGGAACCCTCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: GVCEEDVHGRVCGGG*TAAEPEINSWNPLL Trigger: GAGGAGAGGGTTCCAGCTGTTAATCTCGGGTTCTGCCGCAGTTCACCCACCACCACACACTCGCCCATGAACGTCCTCCTCGCAGACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660562.1 |
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| CDS GCA 90 bp | CCTTCAGGACTCCCTCCCTGTGCTCCAGATGCCCACGCTGACCTCTaGTCACACTCACAGCAGCATTGCAAGTGCCTGTTTCCCCACTGG | + |
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Preference number: 5 (lower is better) Translates to: PSGLPPCAPDAHADL*SHSQQHCKCLFPHW Trigger: CCAGTGGGGAAACAGGCACTTGCAATGCTGCTGTGAGTGTGAGCAGAGGTCAGCGTGGGCATCTGGAGCACAGGGAGGGAGTCCTGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659099.1 ENST00000660562.1 |
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| CDS CCA 90 bp | GTCCTACTACTCCCTCAGATACCTGCACCCTCACCCTGGTCCCACTaGGACATCACCCCAACGGCCCAGAACTGTAGGGCACAAGTCTCG | + |
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Preference number: 5 (lower is better) Translates to: VLLLPQIPAPSPWSH*DITPTAQNCRAQVS Trigger: CGAGACTTGTGCCCTACAGTTCTGGGCCGTTGGGGTGATGTCCCAGTGGGACCAGGGTGAGGGTGCAGGTATCTGAGGGAGTAGTAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000658034.1 ENST00000659099.1 ENST00000660562.1 ENST00000661823.1 ENST00000668126.1 |
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| CDS CCA 90 bp | GAGGTTCTGGTCCTACTACTCCCTCAGATACCTGCACCCTCACCCTaGTCCCACTGGGACATCACCCCAACGGCCCAGAACTGTAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: EVLVLLLPQIPAPSP*SHWDITPTAQNCRA Trigger: TGCCCTACAGTTCTGGGCCGTTGGGGTGATGTCCCAGTGGGACCAGGGTGAGGGTGCAGGTATCTGAGGGAGTAGTAGGACCAGAACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000658034.1 ENST00000659099.1 ENST00000660562.1 ENST00000661823.1 ENST00000668126.1 |
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| CDS TCA 90 bp | AACCCAGCCTTCAGGACTCCCTCCCTGTGCTCCAGATGCCCACGCTaGCCTCTGCTCACACTCACAGCAGCATTGCAAGTGCCTGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: NPAFRTPSLCSRCPR*PLLTLTAALQVPVS Trigger: GGAAACAGGCACTTGCAATGCTGCTGTGAGTGTGAGCAGAGGTCAGCGTGGGCATCTGGAGCACAGGGAGGGAGTCCTGAAGGCTGGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659099.1 ENST00000660562.1 |
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| CDS GCA 90 bp | CTCCCTAAGGTTAGAGGTTCTGGTCCTACTACTCCCTCAGATACCTaGACCCTCACCCTGGTCCCACTGGGACATCACCCCAACGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: LPKVRGSGPTTPSDT*TLTLVPLGHHPNGP Trigger: TGGGCCGTTGGGGTGATGTCCCAGTGGGACCAGGGTGAGGGTGCAGGTATCTGAGGGAGTAGTAGGACCAGAACCTCTAACCTTAGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000658034.1 ENST00000659099.1 ENST00000660562.1 ENST00000661823.1 ENST00000668126.1 |
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| CDS GCA 90 bp | GCCACGGTGATGGACAAGTGGCATATTCAGTTAACGGACTCACTGTaGCCTCCCTCCTTCCCCATCCCCGGCAGTATTGTGGGCGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: ATVMDKWHIQLTDSL*PPSFPIPGSIVGEA Trigger: AGCCTCGCCCACAATACTGCCGGGGATGGGGAAGGAGGGAGGGCACAGTGAGTCCGTTAACTGAATATGCCACTTGTCCATCACCGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419459.1 ENST00000659099.1 ENST00000660562.1 ENST00000663564.1 |
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| CDS TCA 90 bp | GGTGGGTGTCTTGGTGACAGCTGCTGCGGTGGCTGGGTGAGATTATaGCCCCTGGCCTTCTTAACATTCCATGCCCACCAGCTCCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: GGCLGDSCCGGWVRL*PLAFLTFHAHQLPS Trigger: AGAAGGGAGCTGGTGGGCATGGAATGTTAAGAAGGCCAGGGGTCATAATCTCACCCAGCCACCGCAGCAGCTGTCACCAAGACACCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655041.1 |
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| CDS CCA 90 bp | CACAGAGCTGAGATGAGGGGATCCAGAATAGTGCCCCAGGAAACCTaGAGGTTCCACTCCCACTCAACAGCCTCCTTCCAACGGCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: HRAEMRGSRIVPQET*RFHSHSTASFQRPA Trigger: TGCTGGCCGTTGGAAGGAGGCTGTTGAGTGGGAGTGGAACCTCCAGGTTTCCTGGGGCACTATTCTGGATCCCCTCATCTCAGCTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655041.1 ENST00000658892.1 ENST00000666767.1 |
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| CDS GCA 90 bp | TTGCAGAGGCACAATGAAATAGGGTTGATGTCCAGGTCTTCTCACTaGTGGGATCCCAGTCCAGGACCTGCCTCTGCCCCACTGTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: LQRHNEIGLMSRSSH*WDPSPGPASAPLWG Trigger: ACCCCACAGTGGGGCAGAGGCAGGTCCTGGACTGGGATCCCAGCAGTGAGAAGACCTGGACATCAACCCTATTTCATTGTGCCTCTGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000419459.1 ENST00000442515.5 ENST00000444942.2 ENST00000653766.1 ENST00000654358.1 ENST00000654381.1 ENST00000656418.1 ENST00000657082.1 ENST00000658034.1 ENST00000659099.1 ENST00000661823.1 ENST00000663564.1 ENST00000663901.1 |
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| CDS GCA 90 bp | CTCCACTCACTGCAACTTCCTCCATCTGGATTCAAGCAGTTCTCATaGCTCAGCCTCCCGAGTAGCTGGGAACAGGCTTCATCCGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: LHSLQLPPSGFKQFS*LSLPSSWEQASSGF Trigger: GAACCCGGATGAAGCCTGTTCCCAGCTACTCGGGAGGCTGAGGCATGAGAACTGCTTGAATCCAGATGGAGGAAGTTGCAGTGAGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656418.1 |
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| CDS CCA 90 bp | CTCTGCTCACACTCACAGCAGCATTGCAAGTGCCTGTTTCCCCACTaGGTCTCGTTCTCCTCTGCACTCCTAGCACTTAGCACAACGCCT | + |
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Preference number: 5 (lower is better) Translates to: LCSHSQQHCKCLFPH*VSFSSALLALSTTP Trigger: AGGCGTTGTGCTAAGTGCTAGGAGTGCAGAGGAGAACGAGACCCAGTGGGGAAACAGGCACTTGCAATGCTGCTGTGAGTGTGAGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000658034.1 ENST00000659099.1 ENST00000660562.1 |
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| CDS CCA 90 bp | GCAAAAAGTGACCGGAGAGGCTTGTGTTTCATCTGTAGTCGTTGGTaGCTGCTCCGTGGTCCCAGGATGCCTATGCTCTCGGGAGAATCC | + |
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Preference number: 5 (lower is better) Translates to: AKSDRRGLCFICSRW*LLRGPRMPMLSGES Trigger: GGATTCTCCCGAGAGCATAGGCATCCTGGGACCACGGAGCAGCCACCAACGACTACAGATGAAACACAAGCCTCTCCGGTCACTTTTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655041.1 |
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| CDS CCA 90 bp | CCAGCAAAAAGTGACCGGAGAGGCTTGTGTTTCATCTGTAGTCGTTaGTGGCTGCTCCGTGGTCCCAGGATGCCTATGCTCTCGGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: PAKSDRRGLCFICSR*WLLRGPRMPMLSGE Trigger: TTCTCCCGAGAGCATAGGCATCCTGGGACCACGGAGCAGCCACCAACGACTACAGATGAAACACAAGCCTCTCCGGTCACTTTTTGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655041.1 |
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| CDS TCA 90 bp | AGAAACTTCTACCTGGGAACCTTAGGGAGGCTGCCAGTGCCACACTaGACCAGCCAGCTGCCTCTTCCACAAGACCACTCTTCAGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: RNFYLGTLGRLPVPH*TSQLPLPQDHSSEL Trigger: CAACTCTGAAGAGTGGTCTTGTGGAAGAGGCAGCTGGCTGGTTCAGTGTGGCACTGGCAGCCTCCCTAAGGTTCCCAGGTAGAAGTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000658034.1 ENST00000659099.1 ENST00000660562.1 ENST00000661823.1 ENST00000663564.1 ENST00000668126.1 |
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| CDS GCA 90 bp | AAAGTGACCGGAGAGGCTTGTGTTTCATCTGTAGTCGTTGGTGGCTaGTCCGTGGTCCCAGGATGCCTATGCTCTCGGGAGAATCCATCA | + |
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Preference number: 5 (lower is better) Translates to: KVTGEACVSSVVVGG*SVVPGCLCSRENPS Trigger: TGATGGATTCTCCCGAGAGCATAGGCATCCTGGGACCACGGAGCAGCCACCAACGACTACAGATGAAACACAAGCCTCTCCGGTCACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655041.1 |
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| CDS GCA 90 bp | AAAGTGACCGGAGAGGCTTGTGTTTCATCTGTAGTCGTTGGTGGCTaGTCCGTGGTCCCAGGATGCCTATGCTCTAGAGGCTTGATCCGA | + |
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Preference number: 5 (lower is better) Translates to: KVTGEACVSSVVVGG*SVVPGCLCSRGLIR Trigger: TCGGATCAAGCCTCTAGAGCATAGGCATCCTGGGACCACGGAGCAGCCACCAACGACTACAGATGAAACACAAGCCTCTCCGGTCACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666767.1 |
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| CDS CCA 90 bp | CCTTCATGGCTGGCCACTCGCCAGCTTCTAAAGACCAGAACAAACTaGGGACTGGGAAAGTCCTGCTTCACTTCTGGGGACAGAGAACCT | + |
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Preference number: 5 (lower is better) Translates to: PSWLATRQLLKTRTN*GLGKSCFTSGDREP Trigger: AGGTTCTCTGTCCCCAGAAGTGAAGCAGGACTTTCCCAGTCCCCAGTTTGTTCTGGTCTTTAGAAGCTGGCGAGTGGCCAGCCATGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655041.1 |
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| CDS TCA 90 bp | TCCTGTCTGCCTGGTAAACTTCTGGTTCACCATAAGGCTCAGCAATaGGCTGTATCCTCATCCTCAACCCAGCCTTCAGGACTCCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: SCLPGKLLVHHKAQQ*AVSSSSTQPSGLPP Trigger: GGGAGGGAGTCCTGAAGGCTGGGTTGAGGATGAGGATACAGCTCATTGCTGAGCCTTATGGTGAACCAGAAGTTTACCAGGCAGACAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659099.1 ENST00000660562.1 |
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| CDS CCA 90 bp | GCAAAAAGTGACCGGAGAGGCTTGTGTTTCATCTGTAGTCGTTGGTaGCTGCTCCGTGGTCCCAGGATGCCTATGCAGAAAGTGGTACAC | + |
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Preference number: 5 (lower is better) Translates to: AKSDRRGLCFICSRW*LLRGPRMPMQKVVH Trigger: GTGTACCACTTTCTGCATAGGCATCCTGGGACCACGGAGCAGCCACCAACGACTACAGATGAAACACAAGCCTCTCCGGTCACTTTTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658892.1 |
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| CDS CCA 90 bp | CCAGCAAAAAGTGACCGGAGAGGCTTGTGTTTCATCTGTAGTCGTTaGTGGCTGCTCCGTGGTCCCAGGATGCCTATGCAGAAAGTGGTA | + |
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Preference number: 5 (lower is better) Translates to: PAKSDRRGLCFICSR*WLLRGPRMPMQKVV Trigger: TACCACTTTCTGCATAGGCATCCTGGGACCACGGAGCAGCCACCAACGACTACAGATGAAACACAAGCCTCTCCGGTCACTTTTTGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658892.1 |
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| CDS TCA 90 bp | ACTGAACCAGCCAGCTGCCTCTTCCACAAGACCACTCTTCAGAGTTaGCTCTCTCTCCATTGTCCTCTGCAGCACCCACCAAAAGGTAGT | + |
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Preference number: 5 (lower is better) Translates to: TEPASCLFHKTTLQS*LSLHCPLQHPPKGS Trigger: ACTACCTTTTGGTGGGTGCTGCAGAGGACAATGGAGAGAGAGTCAACTCTGAAGAGTGGTCTTGTGGAAGAGGCAGCTGGCTGGTTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000658034.1 ENST00000659099.1 ENST00000660562.1 ENST00000661823.1 ENST00000668126.1 |
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| CDS TCA 90 bp | AATGAGTTGGGACCTGTTTCAGGCTTAGCCATGACCTCACAGAGCTaGGATGAGGGGATCCAGAATAGTGCCCCAGGAAACCTGGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: NELGPVSGLAMTSQS*DEGIQNSAPGNLEV Trigger: AACCTCCAGGTTTCCTGGGGCACTATTCTGGATCCCCTCATCTCAGCTCTGTGAGGTCATGGCTAAGCCTGAAACAGGTCCCAACTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655041.1 ENST00000658892.1 ENST00000666767.1 |
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| CDS GCA 90 bp | CAGCCCAGAGCCGCACAAGACTTGGATTTGCTTTGGAAACCACTGTaGTTTTCAACAAGATCGTTCAAATGGCCTGGGTGGAGACGGGGA | + |
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Preference number: 5 (lower is better) Translates to: QPRAAQDLDLLWKPL*FSTRSFKWPGWRRG Trigger: TCCCCGTCTCCACCCAGGCCATTTGAACGATCTTGTTGAAAAGCACAGTGGTTTCCAAAGCAAATCCAAGTCTTGTGCGGCTCTGGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653766.1 ENST00000660562.1 |
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| CDS GCA 90 bp | AAAGTGACCGGAGAGGCTTGTGTTTCATCTGTAGTCGTTGGTGGCTaGTCCGTGGTCCCAGGATGCCTATGCAGAAAGTGGTACACATCA | + |
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Preference number: 5 (lower is better) Translates to: KVTGEACVSSVVVGG*SVVPGCLCRKWYTS Trigger: TGATGTGTACCACTTTCTGCATAGGCATCCTGGGACCACGGAGCAGCCACCAACGACTACAGATGAAACACAAGCCTCTCCGGTCACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658892.1 |
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| CDS CCA 90 bp | CCCCACTCCACATCCGTGTGGGAAAGCTTATCATTAAGGGAAGGCTaGCAAATTAGAAAGAGCCTTGAGTCTGGGCCTAGCCCTGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: PHSTSVWESLSLREG*QIRKSLESGPSPAD Trigger: ATCTGCAGGGCTAGGCCCAGACTCAAGGCTCTTTCTAATTTGCCAGCCTTCCCTTAATGATAAGCTTTCCCACACGGATGTGGAGTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000419459.1 ENST00000659099.1 ENST00000660562.1 ENST00000663564.1 |
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| CDS TCA 90 bp | CTCCAAGACAGAGATCCAGCCTGGACCTCTTATTTATTGGTATTGTaGTTGGGCAGAACTCCCCCTCCAGGCCATCTCATTGGCTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: LQDRDPAWTSYLLVL*LGRTPPPGHLIGCL Trigger: CAAGCAGCCAATGAGATGGCCTGGAGGGGGAGTTCTGCCCAATCACAATACCAATAAATAAGAGGTCCAGGCTGGATCTCTGTCTTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655041.1 |
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| CDS TCA 90 bp | TTGGTGGCTGCTCCGTGGTCCCAGGATGCCTATGCTCTAGAGGCTTaGTCCGATTCAGATTTGATTTTTCAGCAGGTGTTGTGGTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: LVAAPWSQDAYALEA*SDSDLIFQQVLWSS Trigger: GGAAGACCACAACACCTGCTGAAAAATCAAATCTGAATCGGATCAAGCCTCTAGAGCATAGGCATCCTGGGACCACGGAGCAGCCACCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666767.1 |
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| CDS GCA 90 bp | AGGGATCCAACCTCCTTCCACATTGTGGCTCCACCATCTTCACCTTaGTTGTCTGTGTCAAACCCTCTGTTTCTTCTGAGCAGTAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: RDPTSFHIVAPPSSP*LSVSNPLFLLSSSQ Trigger: CTGGCTACTGCTCAGAAGAAACAGAGGGTTTGACACAGACAAGCAAGGTGAAGATGGTGGAGCCACAATGTGGAAGGAGGTTGGATCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654220.1 ENST00000666845.1 ENST00000668126.1 |
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| CDS CCA 90 bp | AAGACAGAGATCCAGCCTGGACCTCTTATTTATTGGTATTGTGATTaGGCAGAACTCCCCCTCCAGGCCATCTCATTGGCTGCTTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: KTEIQPGPLIYWYCD*AELPLQAISLAACR Trigger: CCTGCAAGCAGCCAATGAGATGGCCTGGAGGGGGAGTTCTGCCCAATCACAATACCAATAAATAAGAGGTCCAGGCTGGATCTCTGTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
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| CDS GCA 90 bp | TCCACAAGACCACTCTTCAGAGTTGACTCTCTCTCCATTGTCCTCTaGAGCACCCACCAAAAGGTAGTGGGATATGGGTCAGACATTCAC | + |
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Preference number: 5 (lower is better) Translates to: STRPLFRVDSLSIVL*STHQKVVGYGSDIH Trigger: GTGAATGTCTGACCCATATCCCACTACCTTTTGGTGGGTGCTGCAGAGGACAATGGAGAGAGAGTCAACTCTGAAGAGTGGTCTTGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000658034.1 ENST00000659099.1 ENST00000660562.1 ENST00000661823.1 ENST00000668126.1 |
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| CDS GCA 90 bp | GTTAGTTATCATTGGTGGATCACTGCCTGGATTCATTGTCCTCTCTaGTCACACTCACAGCAGCATTGCAAGTGCCTGTTTCCCCACTGG | + |
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Preference number: 5 (lower is better) Translates to: VSYHWWITAWIHCPL*SHSQQHCKCLFPHW Trigger: CCAGTGGGGAAACAGGCACTTGCAATGCTGCTGTGAGTGTGAGCAGAGAGGACAATGAATCCAGGCAGTGATCCACCAATGATAACTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000444942.2 ENST00000654220.1 |
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| CDS GCA 90 bp | TGTGTTTCATCTGTAGTCGTTGGTGGCTGCTCCGTGGTCCCAGGATaGCTATGCAGAAAGTGGTACACATCATTCTGGTCACATTCCACT | + |
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Preference number: 5 (lower is better) Translates to: CVSSVVVGGCSVVPG*LCRKWYTSFWSHST Trigger: AGTGGAATGTGACCAGAATGATGTGTACCACTTTCTGCATAGGCATCCTGGGACCACGGAGCAGCCACCAACGACTACAGATGAAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658892.1 |
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| CDS GCA 90 bp | TCATCTGTAGTCGTTGGTGGCTGCTCCGTGGTCCCAGGATGCCTATaGTCTAGAGGCTTGATCCGATTCAGATTTGATTTTTCAGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: SSVVVGGCSVVPGCL*SRGLIRFRFDFSAG Trigger: ACCTGCTGAAAAATCAAATCTGAATCGGATCAAGCCTCTAGAGCATAGGCATCCTGGGACCACGGAGCAGCCACCAACGACTACAGATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666767.1 |
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| CDS GCA 90 bp | TGGGTCTCGTTCTCCTCTGCACTCCTAGCACTTAGCACAACGCCTTaGATAGGTCATCTTGAATGCATATGTGAAAGTGTCCTGCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WVSFSSALLALSTTP*IGHLECICESVLLA Trigger: TGCAAGCAGGACACTTTCACATATGCATTCAAGATGACCTATGCAAGGCGTTGTGCTAAGTGCTAGGAGTGCAGAGGAGAACGAGACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000657082.1 ENST00000658034.1 ENST00000659099.1 ENST00000660562.1 ENST00000661823.1 ENST00000663564.1 ENST00000668126.1 |
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| CDS GCA 90 bp | CGCCAGCTTCTAAAGACCAGAACAAACTGGGGACTGGGAAAGTCCTaGTTCACTTCTGGGGACAGAGAACCTTCCATTCATGGCTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: RQLLKTRTNWGLGKS*FTSGDREPSIHGFK Trigger: TTTAAAGCCATGAATGGAAGGTTCTCTGTCCCCAGAAGTGAAGCAGGACTTTCCCAGTCCCCAGTTTGTTCTGGTCTTTAGAAGCTGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655041.1 |
||
| CDS CCA 90 bp | GGTCATCTTGAATGCATATGTGAAAGTGTCCTGCTTGCATGCCTCTaGAGACAGGGAGCTCACTATCACAAGACCGCTCATTCTGACAAC | + |
|
Preference number: 5 (lower is better) Translates to: GHLECICESVLLACL*RQGAHYHKTAHSDN Trigger: GTTGTCAGAATGAGCGGTCTTGTGATAGTGAGCTCCCTGTCTCCAGAGGCATGCAAGCAGGACACTTTCACATATGCATTCAAGATGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000658034.1 ENST00000659099.1 ENST00000660562.1 ENST00000661823.1 ENST00000663564.1 ENST00000668126.1 |
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| CDS CCA 90 bp | GCTCAAATCTCCAAGACAGAGATCCAGCCTGGACCTCTTATTTATTaGTATTGTGATTGGGCAGAACTCCCCCTCCAGGCCATCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: AQISKTEIQPGPLIY*YCDWAELPLQAISL Trigger: CAATGAGATGGCCTGGAGGGGGAGTTCTGCCCAATCACAATACCAATAAATAAGAGGTCCAGGCTGGATCTCTGTCTTGGAGATTTGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655041.1 |
||
| CDS TCA 90 bp | TGGTCCAATCAGCTATCACCAGGGAGGTGGCGTCCTCCTCCCTGGTaGTACCTAATGTTACTGAATGTTGTTGCTAAGATCATAGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: WSNQLSPGRWRPPPW*YLMLLNVVAKIIDA Trigger: TGCATCTATGATCTTAGCAACAACATTCAGTAACATTAGGTATCACCAGGGAGGAGGACGCCACCTCCCTGGTGATAGCTGATTGGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
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| CDS GCA 90 bp | TGTGTTTCATCTGTAGTCGTTGGTGGCTGCTCCGTGGTCCCAGGATaGCTATGCTCTAGAGGCTTGATCCGATTCAGATTTGATTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CVSSVVVGGCSVVPG*LCSRGLIRFRFDFS Trigger: TGAAAAATCAAATCTGAATCGGATCAAGCCTCTAGAGCATAGGCATCCTGGGACCACGGAGCAGCCACCAACGACTACAGATGAAACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666767.1 |
||
| CDS TCA 90 bp | TTCTGTATCCTGCAGCACAAGCTCCTCCACTCACTGCCTTCAGTGTaGTTTTTGTCTTCTGCTCCTTCTACAGATTGCCCCACATTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FCILQHKLLHSLPSV*FLSSAPSTDCPTFL Trigger: AAGAAATGTGGGGCAATCTGTAGAAGGAGCAGAAGACAAAAATCACACTGAAGGCAGTGAGTGGAGGAGCTTGTGCTGCAGGATACAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655041.1 |
||
| CDS TCA 90 bp | AGACCGCTCATTCTGACAACTTCAAAGTTCTTCCTTAAACACAGCTaGAATCTACCTGTCAGAAACTTCTACCTGGGAACCTTAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPLILTTSKFFLKHS*NLPVRNFYLGTLGR Trigger: CCTCCCTAAGGTTCCCAGGTAGAAGTTTCTGACAGGTAGATTTCAGCTGTGTTTAAGGAAGAACTTTGAAGTTGTCAGAATGAGCGGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000658034.1 ENST00000659099.1 ENST00000660562.1 ENST00000661823.1 ENST00000663564.1 ENST00000668126.1 |
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| CDS CCA 90 bp | CATGTATCTTTTTATGATGTTAGTTATCATTGGTGGATCACTGCCTaGATTCATTGTCCTTGTGATTTACGCGCCACCGTCCTTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HVSFYDVSYHWWITA*IHCPCDLRATVLGV Trigger: CACCCCAAGGACGGTGGCGCGTAAATCACAAGGACAATGAATCCAGGCAGTGATCCACCAATGATAACTAACATCATAAAAAGATACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000654381.1 ENST00000666767.1 ENST00000666845.1 |
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| CDS CCA 90 bp | ATCATATCCGGCCATGTATCTTTTTATGATGTTAGTTATCATTGGTaGATCACTGCCTGGATTCATTGTCCTCTCTGCTCACACTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: IISGHVSFYDVSYHW*ITAWIHCPLCSHSQ Trigger: CTGTGAGTGTGAGCAGAGAGGACAATGAATCCAGGCAGTGATCCACCAATGATAACTAACATCATAAAAAGATACATGGCCGGATATGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000444942.2 ENST00000654220.1 |
||
| CDS CCA 90 bp | CATGTATCTTTTTATGATGTTAGTTATCATTGGTGGATCACTGCCTaGATTCATTGTCCTCTGTATACAGGGATCAATTCGGACCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HVSFYDVSYHWWITA*IHCPLYTGINSDRP Trigger: TGGGCGGTCCGAATTGATCCCTGTATACAGAGGACAATGAATCCAGGCAGTGATCCACCAATGATAACTAACATCATAAAAAGATACATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000442515.5 ENST00000658034.1 ENST00000661823.1 |
||
| CDS CCA 90 bp | CATGTATCTTTTTATGATGTTAGTTATCATTGGTGGATCACTGCCTaGATTCATTGTCCTAGCAGCATTGCAAGTGCCTGTTTCCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: HVSFYDVSYHWWITA*IHCPSSIASACFPT Trigger: AGTGGGGAAACAGGCACTTGCAATGCTGCTAGGACAATGAATCCAGGCAGTGATCCACCAATGATAACTAACATCATAAAAAGATACATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000654358.1 ENST00000657082.1 ENST00000668126.1 |
||
| CDS CCA 90 bp | AACATCATATCCGGCCATGTATCTTTTTATGATGTTAGTTATCATTaGTGGATCACTGCCTGGATTCATTGTCCTCTCTGCTCACACTCA | + |
|
Preference number: 5 (lower is better) Translates to: NIISGHVSFYDVSYH*WITAWIHCPLCSHS Trigger: TGAGTGTGAGCAGAGAGGACAATGAATCCAGGCAGTGATCCACCAATGATAACTAACATCATAAAAAGATACATGGCCGGATATGATGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000444942.2 ENST00000654220.1 |
||
| CDS CCA 90 bp | ATCATATCCGGCCATGTATCTTTTTATGATGTTAGTTATCATTGGTaGATCACTGCCTGGATTCATTGTCCTCTAAATGGTGATAAACCG | + |
|
Preference number: 5 (lower is better) Translates to: IISGHVSFYDVSYHW*ITAWIHCPLNGDKP Trigger: CGGTTTATCACCATTTAGAGGACAATGAATCCAGGCAGTGATCCACCAATGATAACTAACATCATAAAAAGATACATGGCCGGATATGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000419459.1 ENST00000659099.1 ENST00000660562.1 ENST00000663564.1 |
||
| CDS CCA 90 bp | ATCATATCCGGCCATGTATCTTTTTATGATGTTAGTTATCATTGGTaGATCACTGCCTGGATTCATTGTCCTCTGTATACAGGGATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: IISGHVSFYDVSYHW*ITAWIHCPLYTGIN Trigger: ATTGATCCCTGTATACAGAGGACAATGAATCCAGGCAGTGATCCACCAATGATAACTAACATCATAAAAAGATACATGGCCGGATATGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000442515.5 ENST00000658034.1 ENST00000661823.1 |
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| CDS GCA 72 bp | GCCGGTCCTGCCACTCCAGACCCTGCTCTGGGGCTCTaGCTTTCGCCGCAGGTTCTCCCGCAGAGGGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: AGPATPDPALGL*LSPQVLPQRGS Trigger: TGACCCCCTCTGCGGGAGAACCTGCGGCGAAAGGCAGAGCCCCAGAGCAGGGTCTGGAGTGGCAGGACCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660562.1 |
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| CDS GCA 72 bp | AGCCCAGACCTCGGGCTCCCGCCTAGCCCAGGACTCTaGCCGACTGTGGCCTTCTGGGCAAAGCTGGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SPDLGLPPSPGL*PTVAFWAKLAP Trigger: TGGTGCCAGCTTTGCCCAGAAGGCCACAGTCGGGCAGAGTCCTGGGCTAGGCGGGAGCCCGAGGTCTGGGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660562.1 |
||
| CDS TCA 72 bp | GAAGGGCTCTGGAGCCAGCCGCCTGGGTTCGAATCCTaGCTGTCCCCCTCACCAGGTCCGTGGCCTTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: EGLWSQPPGFES*LSPSPGPWPWP Trigger: TGGCCAAGGCCACGGACCTGGTGAGGGGGACAGTCAGGATTCGAACCCAGGCGGCTGGCTCCAGAGCCCTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660562.1 |
||
| CDS GCA 72 bp | GAGGTGGGAGGAGGAGTGGCACCCCACAGACAGGCCTaGAAAGAAGGGGTTGGTCCGCACTCCTCCCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: EVGGGVAPHRQA*KEGVGPHSSRS Trigger: GCTCCGGGAGGAGTGCGGACCAACCCCTTCTTTGCAGGCCTGTCTGTGGGGTGCCACTCCTCCTCCCACCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419459.1 ENST00000659099.1 ENST00000660562.1 ENST00000663564.1 |
||
| CDS CCA 72 bp | CATTGGCTGCCGGTCCTGCCACTCCAGACCCTGCTCTaGGGCTCTGCCTTTCGCCGCAGGTTCTCCCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: HWLPVLPLQTLL*GSAFRRRFSRR Trigger: TCTGCGGGAGAACCTGCGGCGAAAGGCAGAGCCCCAGAGCAGGGTCTGGAGTGGCAGGACCGGCAGCCAATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660562.1 |
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| CDS GCA 72 bp | ACCTTCATTGGCTGCCGGTCCTGCCACTCCAGACCCTaGTCTGGGGCTCTGCCTTTCGCCGCAGGTTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TFIGCRSCHSRP*SGALPFAAGSP Trigger: GGGAGAACCTGCGGCGAAAGGCAGAGCCCCAGAGCAGGGTCTGGAGTGGCAGGACCGGCAGCCAATGAAGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660562.1 |
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| CDS CCA 72 bp | AGTGGCACCCCACAGACAGGCCTGCAAAGAAGGGGTTaGTCCGCACTCCTCCCGGAGCTCCATGGAGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SGTPQTGLQRRG*SALLPELHGAG Trigger: CCCTGCTCCATGGAGCTCCGGGAGGAGTGCGGACCAACCCCTTCTTTGCAGGCCTGTCTGTGGGGTGCCACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419459.1 ENST00000659099.1 ENST00000660562.1 ENST00000663564.1 |
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| CDS CAA 72 bp | GGCAGAACTCCCCCTCCAGGCCATCTCATTGGCTGCTaGCAGGCTGCTGATTGGCTGCCCTGGGACTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRTPPPGHLIGC*QAADWLPWDWG Trigger: GCCCCAGTCCCAGGGCAGCCAATCAGCAGCCTGCAAGCAGCCAATGAGATGGCCTGGAGGGGGAGTTCTGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
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| CDS TCA 72 bp | CCCTCCAGGCCATCTCATTGGCTGCTTGCAGGCTGCTaGTTGGCTGCCCTGGGACTGGGGCTTCCCTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PSRPSHWLLAGC*LAALGLGLPSG Trigger: ACCAGAGGGAAGCCCCAGTCCCAGGGCAGCCAATCAGCAGCCTGCAAGCAGCCAATGAGATGGCCTGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
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| CDS GCA 72 bp | GCAGAACTCCCCCTCCAGGCCATCTCATTGGCTGCTTaGAGGCTGCTGATTGGCTGCCCTGGGACTGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AELPLQAISLAA*RLLIGCPGTGA Trigger: AGCCCCAGTCCCAGGGCAGCCAATCAGCAGCCTGCAAGCAGCCAATGAGATGGCCTGGAGGGGGAGTTCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
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| CDS CAA 90 bp | GCCTGGGTTCGAATCCTGACTGTCCCCCTCACCAGGTCCGTGGCCTaGGCCATCACTCAACCTGGCCCAGCCTCAGAGTCAGTGCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: AWVRILTVPLTRSVA*AITQPGPASESVLV Trigger: GACAAGCACTGACTCTGAGGCTGGGCCAGGTTGAGTGATGGCCAAGGCCACGGACCTGGTGAGGGGGACAGTCAGGATTCGAACCCAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660562.1 |
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| CDS TCA 72 bp | AAGGCCACACAGCAGGGCTGCGCCGGCGCGCATGGCTaGGAAGCAGGTTCCAGGAGTTTCTGGGAGTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KATQQGCAGAHG*EAGSRSFWEFL Trigger: CAAGAACTCCCAGAAACTCCTGGAACCTGCTTCTCAGCCATGCGCGCCGGCGCAGCCCTGCTGTGTGGCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653766.1 |
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| CDS GCA 72 bp | TTGGGCAGAACTCCCCCTCCAGGCCATCTCATTGGCTaGTTGCAGGCTGCTGATTGGCTGCCCTGGGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LGRTPPPGHLIG*LQAADWLPWDW Trigger: CCAGTCCCAGGGCAGCCAATCAGCAGCCTGCAAGCAGCCAATGAGATGGCCTGGAGGGGGAGTTCTGCCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
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| CDS CCA 72 bp | CTCCCTCAGATACCTGCACCCTCACCCTGGTCCCACTaGGACATCACCCCAACGGCCCAGAACTGTAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LPQIPAPSPWSH*DITPTAQNCRA Trigger: TGCCCTACAGTTCTGGGCCGTTGGGGTGATGTCCCAGTGGGACCAGGGTGAGGGTGCAGGTATCTGAGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000658034.1 ENST00000659099.1 ENST00000660562.1 ENST00000661823.1 ENST00000668126.1 |
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| CDS CCA 72 bp | CCAGGCCATCTCATTGGCTGCTTGCAGGCTGCTGATTaGCTGCCCTGGGACTGGGGCTTCCCTCTGGTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PGHLIGCLQAAD*LPWDWGFPLVQ Trigger: TTGGACCAGAGGGAAGCCCCAGTCCCAGGGCAGCCAATCAGCAGCCTGCAAGCAGCCAATGAGATGGCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
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| CDS CAA 72 bp | CGAATCCTGACTGTCCCCCTCACCAGGTCCGTGGCCTaGGCCATCACTCAACCTGGCCCAGCCTCAGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RILTVPLTRSVA*AITQPGPASES Trigger: TGACTCTGAGGCTGGGCCAGGTTGAGTGATGGCCAAGGCCACGGACCTGGTGAGGGGGACAGTCAGGATTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660562.1 |
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| CDS GCA 72 bp | GCCATCTCATTGGCTGCTTGCAGGCTGCTGATTGGCTaGCCTGGGACTGGGGCTTCCCTCTGGTCCAATCAG | + |
|
Preference number: 6 (lower is better) Translates to: AISLAACRLLIG*PGTGASLWSNQ Trigger: CTGATTGGACCAGAGGGAAGCCCCAGTCCCAGGGCAGCCAATCAGCAGCCTGCAAGCAGCCAATGAGATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
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| CDS CCA 72 bp | GTCCTACTACTCCCTCAGATACCTGCACCCTCACCCTaGTCCCACTGGGACATCACCCCAACGGCCCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VLLLPQIPAPSP*SHWDITPTAQN Trigger: GTTCTGGGCCGTTGGGGTGATGTCCCAGTGGGACCAGGGTGAGGGTGCAGGTATCTGAGGGAGTAGTAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000658034.1 ENST00000659099.1 ENST00000660562.1 ENST00000661823.1 ENST00000668126.1 |
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| CDS CAA 72 bp | TGTGATTGGGCAGAACTCCCCCTCCAGGCCATCTCATaGGCTGCTTGCAGGCTGCTGATTGGCTGCCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CDWAELPLQAIS*AACRLLIGCPG Trigger: CCCAGGGCAGCCAATCAGCAGCCTGCAAGCAGCCAATGAGATGGCCTGGAGGGGGAGTTCTGCCCAATCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
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| CDS TCA 72 bp | AGGCTAGTGACCCCCATCCATTCCCATGGCATCGTTTaGAGGGCTCTGGAGCCAGCCGCCTGGGTTCGAATC | + |
|
Preference number: 6 (lower is better) Translates to: RLVTPIHSHGIV*RALEPAAWVRI Trigger: GATTCGAACCCAGGCGGCTGGCTCCAGAGCCCTTCAAACGATGCCATGGGAATGGATGGGGGTCACTAGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660562.1 |
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| CDS CCA 72 bp | CTCATTGGCTGCTTGCAGGCTGCTGATTGGCTGCCCTaGGACTGGGGCTTCCCTCTGGTCCAATCAGCTATC | + |
|
Preference number: 6 (lower is better) Translates to: LIGCLQAADWLP*DWGFPLVQSAI Trigger: GATAGCTGATTGGACCAGAGGGAAGCCCCAGTCCCAGGGCAGCCAATCAGCAGCCTGCAAGCAGCCAATGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
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| CDS CAA 90 bp | TATTGGTATTGTGATTGGGCAGAACTCCCCCTCCAGGCCATCTCATaGGCTGCTTGCAGGCTGCTGATTGGCTGCCCTGGGACTGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: YWYCDWAELPLQAIS*AACRLLIGCPGTGA Trigger: AGCCCCAGTCCCAGGGCAGCCAATCAGCAGCCTGCAAGCAGCCAATGAGATGGCCTGGAGGGGGAGTTCTGCCCAATCACAATACCAATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
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| CDS TCA 72 bp | TACCTGGGAACCTTAGGGAGGCTGCCAGTGCCACACTaGACCAGCCAGCTGCCTCTTCCACAAGACCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: YLGTLGRLPVPH*TSQLPLPQDHS Trigger: AGAGTGGTCTTGTGGAAGAGGCAGCTGGCTGGTTCAGTGTGGCACTGGCAGCCTCCCTAAGGTTCCCAGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000658034.1 ENST00000659099.1 ENST00000660562.1 ENST00000661823.1 ENST00000663564.1 ENST00000668126.1 |
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| CDS TCA 72 bp | GAGGAGGACGTTCATGGGCGAGTGTGTGGTGGTGGGTaGACTGCGGCAGAACCCGAGATTAACAGCTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: EEDVHGRVCGGG*TAAEPEINSWN Trigger: GTTCCAGCTGTTAATCTCGGGTTCTGCCGCAGTTCACCCACCACCACACACTCGCCCATGAACGTCCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660562.1 |
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| CDS GCA 72 bp | GTTAGAGGTTCTGGTCCTACTACTCCCTCAGATACCTaGACCCTCACCCTGGTCCCACTGGGACATCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: VRGSGPTTPSDT*TLTLVPLGHHP Trigger: GGGGTGATGTCCCAGTGGGACCAGGGTGAGGGTGCAGGTATCTGAGGGAGTAGTAGGACCAGAACCTCTAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000658034.1 ENST00000659099.1 ENST00000660562.1 ENST00000661823.1 ENST00000668126.1 |
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| CDS GCA 72 bp | GGAGAGGCTTGTGTTTCATCTGTAGTCGTTGGTGGCTaGTCCGTGGTCCCAGGATGCCTATGCTCTCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GEACVSSVVVGG*SVVPGCLCSRE Trigger: CTCCCGAGAGCATAGGCATCCTGGGACCACGGAGCAGCCACCAACGACTACAGATGAAACACAAGCCTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655041.1 |
||
| CDS GCA 72 bp | CTGCCTGCGCCTCACTCTCTCCTGGCTTCTGTATCCTaGAGCACAAGCTCCTCCACTCACTGCCTTCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LPAPHSLLASVS*STSSSTHCLQC Trigger: ACACTGAAGGCAGTGAGTGGAGGAGCTTGTGCTGCAGGATACAGAAGCCAGGAGAGAGTGAGGCGCAGGCAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655041.1 |
||
| CDS GCA 72 bp | CTCCCTCCCTGTGCTCCAGATGCCCACGCTGACCTCTaGTCACACTCACAGCAGCATTGCAAGTGCCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LPPCAPDAHADL*SHSQQHCKCLF Trigger: AAACAGGCACTTGCAATGCTGCTGTGAGTGTGAGCAGAGGTCAGCGTGGGCATCTGGAGCACAGGGAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659099.1 ENST00000660562.1 |
||
| CDS CAA 90 bp | TCAACAGCCTCCTTCCAACGGCCAGCAAAAAGTGACCGGAGAGGCTaGTGTTTCATCTGTAGTCGTTGGTGGCTGCTCCGTGGTCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: STASFQRPAKSDRRG*CFICSRWWLLRGPR Trigger: CCTGGGACCACGGAGCAGCCACCAACGACTACAGATGAAACACAAGCCTCTCCGGTCACTTTTTGCTGGCCGTTGGAAGGAGGCTGTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655041.1 ENST00000658892.1 ENST00000666767.1 |
||
| CDS TCA 72 bp | CTTGGTGACAGCTGCTGCGGTGGCTGGGTGAGATTATaGCCCCTGGCCTTCTTAACATTCCATGCCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGDSCCGGWVRL*PLAFLTFHAHQ Trigger: CTGGTGGGCATGGAATGTTAAGAAGGCCAGGGGTCATAATCTCACCCAGCCACCGCAGCAGCTGTCACCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655041.1 |
||
| CDS TCA 72 bp | ATCCATCAGATGAAGGGGTCTGCAAGCAAGGCTCTCTaGGAGGTGGGTGTCTTGGTGACAGCTGCTGCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: IHQMKGSASKAL*EVGVLVTAAAV Trigger: CACCGCAGCAGCTGTCACCAAGACACCCACCTCTCAGAGAGCCTTGCTTGCAGACCCCTTCATCTGATGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655041.1 |
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| CDS TCA 72 bp | CCCAGGATGCCTATGCTCTCGGGAGAATCCATCAGATaGAGGGGTCTGCAAGCAAGGCTCTCTGAGAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRMPMLSGESIR*RGLQARLSERW Trigger: CCACCTCTCAGAGAGCCTTGCTTGCAGACCCCTTCATCTGATGGATTCTCCCGAGAGCATAGGCATCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655041.1 |
||
| CDS GCA 72 bp | GGAGAGGCTTGTGTTTCATCTGTAGTCGTTGGTGGCTaGTCCGTGGTCCCAGGATGCCTATGCTCTAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GEACVSSVVVGG*SVVPGCLCSRG Trigger: GCCTCTAGAGCATAGGCATCCTGGGACCACGGAGCAGCCACCAACGACTACAGATGAAACACAAGCCTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666767.1 |
||
| CDS CAA 90 bp | GTTGGTGAAGTCTGGGCTCTTGCTTCTGGCATCCAAGGCCTTCCCTaGGGCTCATCCCTATCTCACCTCTCCCTACCATCTTCCCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: VGEVWALASGIQGLP*GSSLSHLSLPSSHD Trigger: GTCATGGGAAGATGGTAGGGAGAGGTGAGATAGGGATGAGCCCAAGGGAAGGCCTTGGATGCCAGAAGCAAGAGCCCAGACTTCACCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655041.1 |
||
| CDS TCA 72 bp | GCCCATGTTCTGCAGGGATCGTTTATGCTCCAGGAATaGCCCTGGGTGCTGCCTCCACCTCCTCTAAACATC | + |
|
Preference number: 6 (lower is better) Translates to: AHVLQGSFMLQE*PWVLPPPPLNI Trigger: GATGTTTAGAGGAGGTGGAGGCAGCACCCAGGGTCATTCCTGGAGCATAAACGATCCCTGCAGAACATGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653766.1 |
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| CDS TCA 72 bp | GCCAGCTGCCTCTTCCACAAGACCACTCTTCAGAGTTaGCTCTCTCTCCATTGTCCTCTGCACCCTCACCCT | + |
|
Preference number: 6 (lower is better) Translates to: ASCLFHKTTLQS*LSLHCPLHPHP Trigger: AGGGTGAGGGTGCAGAGGACAATGGAGAGAGAGTCAACTCTGAAGAGTGGTCTTGTGGAAGAGGCAGCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663564.1 |
||
| CDS GCA 72 bp | GATGGGAGGCCACATATAAGGATAGCAACTCAGCCATaGCAGTCACTTGGCATGGCCTTCATGGCTGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: DGRPHIRIATQP*QSLGMAFMAGH Trigger: GTGGCCAGCCATGAAGGCCATGCCAAGTGACTGGCATGGCTGAGTTGCTATCCTTATATGTGGCCTCCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655041.1 |
||
| CDS GCA 72 bp | ATTCTTCAGAATTTCAGGCTTCAATGCCCTCCTTGCTaGCTCTCCAGTGAAGGCGAGGGGCAGATGGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ILQNFRLQCPPC*LSSEGEGQMGG Trigger: GCCTCCCATCTGCCCCTCGCCTTCACTGGAGAGGCAGCAAGGAGGGCATTGAAGCCTGAAATTCTGAAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655041.1 |
||
| CDS GCA 72 bp | GGAGAGGCTTGTGTTTCATCTGTAGTCGTTGGTGGCTaGTCCGTGGTCCCAGGATGCCTATGCAGAAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GEACVSSVVVGG*SVVPGCLCRKW Trigger: CCACTTTCTGCATAGGCATCCTGGGACCACGGAGCAGCCACCAACGACTACAGATGAAACACAAGCCTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658892.1 |
||
| CDS CCA 72 bp | CTGGCCACTCGCCAGCTTCTAAAGACCAGAACAAACTaGGGACTGGGAAAGTCCTGCTTCACTTCTGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LATRQLLKTRTN*GLGKSCFTSGD Trigger: GTCCCCAGAAGTGAAGCAGGACTTTCCCAGTCCCCAGTTTGTTCTGGTCTTTAGAAGCTGGCGAGTGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655041.1 |
||
| CDS CCA 72 bp | CAACTCAGCCATGCCAGTCACTTGGCATGGCCTTCATaGCTGGCCACTCGCCAGCTTCTAAAGACCAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: QLSHASHLAWPS*LATRQLLKTRT Trigger: TGTTCTGGTCTTTAGAAGCTGGCGAGTGGCCAGCCATGAAGGCCATGCCAAGTGACTGGCATGGCTGAGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655041.1 |
||
| CDS CAA 72 bp | TATTGTGGGCGAGGCTTGACCTACTCTGTGATGGGGTaGGAGGCAACACTTCCTGCCCACTTCTCCCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: YCGRGLTYSVMG*EATLPAHFSPL Trigger: AAGAGGGGAGAAGTGGGCAGGAAGTGTTGCCTCCAACCCCATCACAGAGTAGGTCAAGCCTCGCCCACAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419459.1 ENST00000659099.1 ENST00000660562.1 ENST00000663564.1 |
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| CDS CAA 72 bp | AGCCAGCTGCCTCTTCCACAAGACCACTCTTCAGAGTaGACTCTCTCTCCATTGTCCTCTGCACCCTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: SQLPLPQDHSSE*TLSPLSSAPSP Trigger: GGGTGAGGGTGCAGAGGACAATGGAGAGAGAGTCAACTCTGAAGAGTGGTCTTGTGGAAGAGGCAGCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663564.1 |
||
| CDS TCA 72 bp | GGACCTGTTTCAGGCTTAGCCATGACCTCACAGAGCTaGGATGAGGGGATCCAGAATAGTGCCCCAGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: GPVSGLAMTSQS*DEGIQNSAPGN Trigger: GTTTCCTGGGGCACTATTCTGGATCCCCTCATCTCAGCTCTGTGAGGTCATGGCTAAGCCTGAAACAGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655041.1 ENST00000658892.1 ENST00000666767.1 |
||
| CDS GCA 72 bp | CTGCAACTTCCTCCATCTGGATTCAAGCAGTTCTCATaGCTCAGCCTCCCGAGTAGCTGGGAACAGGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LQLPPSGFKQFS*LSLPSSWEQAS Trigger: TGAAGCCTGTTCCCAGCTACTCGGGAGGCTGAGGCATGAGAACTGCTTGAATCCAGATGGAGGAAGTTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656418.1 |
||
| CDS GCA 72 bp | GTCGTTGGTGGCTGCTCCGTGGTCCCAGGATGCCTATaGAGAAAGTGGTACACATCATTCTGGTCACATTCC | + |
|
Preference number: 6 (lower is better) Translates to: VVGGCSVVPGCL*RKWYTSFWSHS Trigger: GGAATGTGACCAGAATGATGTGTACCACTTTCTGCATAGGCATCCTGGGACCACGGAGCAGCCACCAACGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658892.1 |
||
| CDS CCA 72 bp | ACATATAAGGATAGCAACTCAGCCATGCCAGTCACTTaGCATGGCCTTCATGGCTGGCCACTCGCCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TYKDSNSAMPVT*HGLHGWPLASF Trigger: GAAGCTGGCGAGTGGCCAGCCATGAAGGCCATGCCAAGTGACTGGCATGGCTGAGTTGCTATCCTTATATGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655041.1 |
||
| CDS CAA 72 bp | GCAACATGTCCTTCTCTGCTCACACTCACAGCAGCATaGCAAGTGCCTGTTTCCCCACTGGGTCTCGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ATCPSLLTLTAA*QVPVSPLGLVL Trigger: GAGAACGAGACCCAGTGGGGAAACAGGCACTTGCAATGCTGCTGTGAGTGTGAGCAGAGAAGGACATGTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419459.1 ENST00000658034.1 |
||
| CDS CAA 72 bp | TCCTTCCAACGGCCAGCAAAAAGTGACCGGAGAGGCTaGTGTTTCATCTGTAGTCGTTGGTGGCTGCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SFQRPAKSDRRG*CFICSRWWLLR Trigger: ACGGAGCAGCCACCAACGACTACAGATGAAACACAAGCCTCTCCGGTCACTTTTTGCTGGCCGTTGGAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655041.1 ENST00000658892.1 ENST00000666767.1 |
||
| CDS CAA 72 bp | GGTGGATCACTGCCTGGATTCATTGTCCTAGCAGCATaGCAAGTGCCTGTTTCCCCACTGGGTCTCGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GGSLPGFIVLAA*QVPVSPLGLVL Trigger: GAGAACGAGACCCAGTGGGGAAACAGGCACTTGCAATGCTGCTAGGACAATGAATCCAGGCAGTGATCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654358.1 ENST00000657082.1 ENST00000668126.1 |
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| CDS TCA 72 bp | ACCTGGGCCTCCTCCAGGTACAGGAAACCACAAGTCTaGGCTTGCAGCTACAGCTCCAAAAGTTGGGAGATT | + |
|
Preference number: 6 (lower is better) Translates to: TWASSRYRKPQV*ACSYSSKSWEI Trigger: AATCTCCCAACTTTTGGAGCTGTAGCTGCAAGCTCAGACTTGTGGTTTCCTGTACCTGGAGGAGGCCCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000419459.1 ENST00000442515.5 ENST00000444942.2 ENST00000653766.1 ENST00000654358.1 ENST00000654381.1 ENST00000656418.1 ENST00000657082.1 ENST00000658034.1 ENST00000659099.1 ENST00000661823.1 ENST00000663564.1 ENST00000663901.1 |
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| CDS TCA 72 bp | TCATTGGTGGATCACTGCCTGGATTCATTGTCCTTGTaGTTTACGCGCCACCGTCCTTGGGGTGGCAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLVDHCLDSLSL*FTRHRPWGGRR Trigger: TCTTCTGCCACCCCAAGGACGGTGGCGCGTAAATCACAAGGACAATGAATCCAGGCAGTGATCCACCAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654381.1 ENST00000666767.1 ENST00000666845.1 |
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| CDS TCA 72 bp | CCTCCTCTAAACATCTGTGATGATTATAGGTCTGGGTaGAAAGCGTGGGACCCTCAGCCCAGAGCCGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: PPLNICDDYRSG*KAWDPQPRAAQ Trigger: TTGTGCGGCTCTGGGCTGAGGGTCCCACGCTTTTCACCCAGACCTATAATCATCACAGATGTTTAGAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653766.1 ENST00000660562.1 |
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| CDS GCA 72 bp | TCTGTAGTCGTTGGTGGCTGCTCCGTGGTCCCAGGATaGCTATGCAGAAAGTGGTACACATCATTCTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SVVVGGCSVVPG*LCRKWYTSFWS Trigger: TGACCAGAATGATGTGTACCACTTTCTGCATAGGCATCCTGGGACCACGGAGCAGCCACCAACGACTACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658892.1 |
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| CDS GCA 72 bp | TCTGTAGTCGTTGGTGGCTGCTCCGTGGTCCCAGGATaGCTATGCTCTAGAGGCTTGATCCGATTCAGATTT | + |
|
Preference number: 6 (lower is better) Translates to: SVVVGGCSVVPG*LCSRGLIRFRF Trigger: AAATCTGAATCGGATCAAGCCTCTAGAGCATAGGCATCCTGGGACCACGGAGCAGCCACCAACGACTACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666767.1 |
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| CDS CCA 72 bp | TTCAAGCAGTTCTCATGCCTCAGCCTCCCGAGTAGCTaGGAACAGGCTTCATCCGGGTTCAAGCAATTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FKQFSCLSLPSS*EQASSGFKQFS Trigger: TGAGAATTGCTTGAACCCGGATGAAGCCTGTTCCCAGCTACTCGGGAGGCTGAGGCATGAGAACTGCTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656418.1 |
||
| CDS CCA 72 bp | CAGAAAGTGGTACACATCATTCTGGTCACATTCCACTaGCTAGCACACAGCAGGCTTCTCCCACACCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: QKVVHIILVTFH*LAHSRLLPHHP Trigger: GGGATGGTGTGGGAGAAGCCTGCTGTGTGCTAGCCAGTGGAATGTGACCAGAATGATGTGTACCACTTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658892.1 |
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| CDS CAA 90 bp | ATTTCTTCTGCAACATGTCCTTCTCTGCTCACACTCACAGCAGCATaGCAAGTGCCTGTTTCCCCACTGGGTCTCGTTCTCCTCTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: ISSATCPSLLTLTAA*QVPVSPLGLVLLCT Trigger: AGTGCAGAGGAGAACGAGACCCAGTGGGGAAACAGGCACTTGCAATGCTGCTGTGAGTGTGAGCAGAGAAGGACATGTTGCAGAAGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419459.1 ENST00000658034.1 |
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| CDS CAA 90 bp | GTTATCATTGGTGGATCACTGCCTGGATTCATTGTCCTAGCAGCATaGCAAGTGCCTGTTTCCCCACTGGGTCTCGTTCTCCTCTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: VIIGGSLPGFIVLAA*QVPVSPLGLVLLCT Trigger: AGTGCAGAGGAGAACGAGACCCAGTGGGGAAACAGGCACTTGCAATGCTGCTAGGACAATGAATCCAGGCAGTGATCCACCAATGATAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654358.1 ENST00000657082.1 ENST00000668126.1 |
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| CDS CAA 90 bp | GTTGGTGGCTGCTCCGTGGTCCCAGGATGCCTATGCTCTAGAGGCTaGATCCGATTCAGATTTGATTTTTCAGCAGGTGTTGTGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VGGCSVVPGCLCSRG*IRFRFDFSAGVVVF Trigger: GAAGACCACAACACCTGCTGAAAAATCAAATCTGAATCGGATCAAGCCTCTAGAGCATAGGCATCCTGGGACCACGGAGCAGCCACCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666767.1 |
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| CDS TCA 72 bp | CTGCAGCACAAGCTCCTCCACTCACTGCCTTCAGTGTaGTTTTTGTCTTCTGCTCCTTCTACAGATTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LQHKLLHSLPSV*FLSSAPSTDCP Trigger: GGGGCAATCTGTAGAAGGAGCAGAAGACAAAAATCACACTGAAGGCAGTGAGTGGAGGAGCTTGTGCTGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655041.1 |
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| CDS TCA 72 bp | AATGCATATGTGAAAGTGTCCTGCTTGCATGCCTTGTaGTTTACGCGCCACCGTCCTTGGGGTGGCAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: NAYVKVSCLHAL*FTRHRPWGGRR Trigger: TCTTCTGCCACCCCAAGGACGGTGGCGCGTAAATCACAAGGCATGCAAGCAGGACACTTTCACATATGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657082.1 |
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| CDS GCA 72 bp | AAAATTCTTCAGAATTTCAGGCTTCAATGCCCTCCTTaGTGCCTCTCCAGTGAAGGCGAGGGGCAGATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KILQNFRLQCPP*CLSSEGEGQMG Trigger: TCCCATCTGCCCCTCGCCTTCACTGGAGAGGCAGCAAGGAGGGCATTGAAGCCTGAAATTCTGAAGAATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655041.1 |
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| CDS GCA 72 bp | GTCGTTGGTGGCTGCTCCGTGGTCCCAGGATGCCTATaGTCTAGAGGCTTGATCCGATTCAGATTTGATTTT | + |
|
Preference number: 6 (lower is better) Translates to: VVGGCSVVPGCL*SRGLIRFRFDF Trigger: AAAATCAAATCTGAATCGGATCAAGCCTCTAGAGCATAGGCATCCTGGGACCACGGAGCAGCCACCAACGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666767.1 |
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| CDS CCA 72 bp | CTAAATGGTGATAAACCGGCCACGGTGATGGACAAGTaGCATATTCAGTTAACGGACTCACTGTGCCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LNGDKPATVMDK*HIQLTDSLCPP Trigger: GGGAGGGCACAGTGAGTCCGTTAACTGAATATGCCACTTGTCCATCACCGTGGCCGGTTTATCACCATTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000419459.1 ENST00000659099.1 ENST00000660562.1 ENST00000663564.1 |
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| CDS CCA 72 bp | TCCAAGACAGAGATCCAGCCTGGACCTCTTATTTATTaGTATTGTGATTGGGCAGAACTCCCCCTCCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SKTEIQPGPLIY*YCDWAELPLQA Trigger: GGCCTGGAGGGGGAGTTCTGCCCAATCACAATACCAATAAATAAGAGGTCCAGGCTGGATCTCTGTCTTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
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| CDS CAA 90 bp | GATCCAACCTCCTTCCACATTGTGGCTCCACCATCTTCACCTTGCTaGTCTGTGTCAAACCCTCTGTTTCTTCTGAGCAGTAGCCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: DPTSFHIVAPPSSPC*SVSNPLFLLSSSQR Trigger: TCTCTGGCTACTGCTCAGAAGAAACAGAGGGTTTGACACAGACAAGCAAGGTGAAGATGGTGGAGCCACAATGTGGAAGGAGGTTGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654220.1 ENST00000666845.1 ENST00000668126.1 |
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| CDS TCA 72 bp | CAGCTATCACCAGGGAGGTGGCGTCCTCCTCCCTGGTaGTACCTAATGTTACTGAATGTTGTTGCTAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: QLSPGRWRPPPW*YLMLLNVVAKI Trigger: GATCTTAGCAACAACATTCAGTAACATTAGGTATCACCAGGGAGGAGGACGCCACCTCCCTGGTGATAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
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| CDS TCA 72 bp | GCTCCGTGGTCCCAGGATGCCTATGCTCTAGAGGCTTaGTCCGATTCAGATTTGATTTTTCAGCAGGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: APWSQDAYALEA*SDSDLIFQQVL Trigger: CAACACCTGCTGAAAAATCAAATCTGAATCGGATCAAGCCTCTAGAGCATAGGCATCCTGGGACCACGGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666767.1 |
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| CDS CCA 72 bp | ATCCAGCCTGGACCTCTTATTTATTGGTATTGTGATTaGGCAGAACTCCCCCTCCAGGCCATCTCATTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: IQPGPLIYWYCD*AELPLQAISLA Trigger: AGCCAATGAGATGGCCTGGAGGGGGAGTTCTGCCCAATCACAATACCAATAAATAAGAGGTCCAGGCTGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
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| CDS TCA 72 bp | GGCAGTTTTCTCAAAAATCACCCAGGGAATCTGTGCTaGTCTCAAACTAGAGCTGAGAGAGGGAGAGACGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSFLKNHPGNLC*SQTRAERGRDA Trigger: TGCGTCTCTCCCTCTCTCAGCTCTAGTTTGAGATCAGCACAGATTCCCTGGGTGATTTTTGAGAAAACTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000658034.1 ENST00000660562.1 ENST00000661823.1 ENST00000663564.1 ENST00000668126.1 |
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| CDS TCA 72 bp | AGAGATCCAGCCTGGACCTCTTATTTATTGGTATTGTaGTTGGGCAGAACTCCCCCTCCAGGCCATCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: RDPAWTSYLLVL*LGRTPPPGHLI Trigger: AATGAGATGGCCTGGAGGGGGAGTTCTGCCCAATCACAATACCAATAAATAAGAGGTCCAGGCTGGATCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655041.1 ENST00000666767.1 |
||
| CDS GCA 72 bp | ATCTGTCGCCACCCTTTCCTGATGCAGGTTAGGGGATaGCAAGTCCTAAAGAGGAGGCAGTTTTCTCAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: ICRHPFLMQVRG*QVLKRRQFSQK Trigger: TTTTTGAGAAAACTGCCTCCTCTTTAGGACTTGGCATCCCCTAACCTGCATCAGGAAAGGGTGGCGACAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000658034.1 ENST00000660562.1 ENST00000661823.1 ENST00000663564.1 ENST00000668126.1 |
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| CDS GCA 72 bp | CTAAAGACCAGAACAAACTGGGGACTGGGAAAGTCCTaGTTCACTTCTGGGGACAGAGAACCTTCCATTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LKTRTNWGLGKS*FTSGDREPSIH Trigger: ATGAATGGAAGGTTCTCTGTCCCCAGAAGTGAAGCAGGACTTTCCCAGTCCCCAGTTTGTTCTGGTCTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655041.1 |
||
| CDS CAA 72 bp | TCCTTCCACATTGTGGCTCCACCATCTTCACCTTGCTaGTCTGTGTCAAACCCTCTGTTTCTTCTGAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SFHIVAPPSSPC*SVSNPLFLLSS Trigger: ACTGCTCAGAAGAAACAGAGGGTTTGACACAGACAAGCAAGGTGAAGATGGTGGAGCCACAATGTGGAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654220.1 ENST00000666845.1 ENST00000668126.1 |
||
| CDS CAA 72 bp | TGCTCCGTGGTCCCAGGATGCCTATGCTCTAGAGGCTaGATCCGATTCAGATTTGATTTTTCAGCAGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: CSVVPGCLCSRG*IRFRFDFSAGV Trigger: AACACCTGCTGAAAAATCAAATCTGAATCGGATCAAGCCTCTAGAGCATAGGCATCCTGGGACCACGGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666767.1 |
||
| CDS CAA 90 bp | ACCACAAGTCTGAGCTTGCAGCTACAGCTCCAAAAGTTGGGAGATTaGCAGAGGCACAATGAAATAGGGTTGATGTCCAGGTCTTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: TTSLSLQLQLQKLGD*QRHNEIGLMSRSSH Trigger: GTGAGAAGACCTGGACATCAACCCTATTTCATTGTGCCTCTGCAAATCTCCCAACTTTTGGAGCTGTAGCTGCAAGCTCAGACTTGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000419459.1 ENST00000442515.5 ENST00000444942.2 ENST00000653766.1 ENST00000654358.1 ENST00000654381.1 ENST00000656418.1 ENST00000657082.1 ENST00000658034.1 ENST00000659099.1 ENST00000661823.1 ENST00000663564.1 ENST00000663901.1 |
||
| CDS GCA 72 bp | CCCCAGTCTTATTCTTCACTGTACTTGCATTTCTTCTaGAACATGTCCTTCTCTGCTCACACTCACAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PQSYSSLYLHFF*NMSFSAHTHSS Trigger: GCTGCTGTGAGTGTGAGCAGAGAAGGACATGTTGCAGAAGAAATGCAAGTACAGTGAAGAATAAGACTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419459.1 ENST00000658034.1 |
||
| CDS GCA 72 bp | AGGGATCGTTTATGCTCCAGGAATGACCCTGGGTGCTaGCTCCTTGTTTCATCCAAACTTTTACTTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RDRLCSRNDPGC*LLVSSKLLLPS Trigger: AGAAGGAAGTAAAAGTTTGGATGAAACAAGGAGGCAGCACCCAGGGTCATTCCTGGAGCATAAACGATCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656418.1 |
||
| CDS TCA 72 bp | TTGTTTAAGCCAGTCATTGTTGCTAATCCTTTGACCTaGACAGCCACCCCCTCACTACTTGGAGTCATGACA | + |
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Preference number: 6 (lower is better) Translates to: LFKPVIVANPLT*TATPSLLGVMT Trigger: TGTCATGACTCCAAGTAGTGAGGGGGTGGCTGTTCAGGTCAAAGGATTAGCAACAATGACTGGCTTAAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655041.1 ENST00000658892.1 ENST00000666767.1 |
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| CDS GCA 72 bp | TTCTCCTCTGCACTCCTAGCACTTAGCACAACGCCTTaGATAGGTCATCTTGAATGCATATGTGAAAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: FSSALLALSTTP*IGHLECICESV Trigger: GACACTTTCACATATGCATTCAAGATGACCTATGCAAGGCGTTGTGCTAAGTGCTAGGAGTGCAGAGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000657082.1 ENST00000658034.1 ENST00000659099.1 ENST00000660562.1 ENST00000661823.1 ENST00000663564.1 ENST00000668126.1 |
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| CDS TCA 72 bp | GAGACAGGGAGCTCACTATCACAAGACCGCTCATTCTaGCAACTTCAAAGTTCTTCCTTAAACACAGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: ETGSSLSQDRSF*QLQSSSLNTAE Trigger: TTCAGCTGTGTTTAAGGAAGAACTTTGAAGTTGTCAGAATGAGCGGTCTTGTGATAGTGAGCTCCCTGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000658034.1 ENST00000659099.1 ENST00000660562.1 ENST00000661823.1 ENST00000663564.1 ENST00000668126.1 |
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| CDS CAA 72 bp | AGAGCTGAAATCCTTTCTGACATCTCAGGACCAAACTaGTCAAATCTCAGCAACAGCTTTTCCCCATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RAEILSDISGPN*SNLSNSFSPSA Trigger: TGCTGATGGGGAAAAGCTGTTGCTGAGATTTGACAAGTTTGGTCCTGAGATGTCAGAAAGGATTTCAGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 15 transcripts: ENST00000419459.1 ENST00000444942.2 ENST00000654220.1 ENST00000654358.1 ENST00000654381.1 ENST00000657082.1 ENST00000658034.1 ENST00000658892.1 ENST00000660562.1 ENST00000661823.1 ENST00000663564.1 ENST00000663901.1 ENST00000666767.1 ENST00000666845.1 ENST00000668126.1 |
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| CDS CCA 72 bp | TTTTATGATGTTAGTTATCATTGGTGGATCACTGCCTaGATTCATTGTCCTCTCTGCTCACACTCACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: FYDVSYHWWITA*IHCPLCSHSQQ Trigger: CTGCTGTGAGTGTGAGCAGAGAGGACAATGAATCCAGGCAGTGATCCACCAATGATAACTAACATCATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000444942.2 ENST00000654220.1 |
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| CDS CCA 72 bp | TTTTATGATGTTAGTTATCATTGGTGGATCACTGCCTaGATTCATTGTCCTTGTGATTTACGCGCCACCGTC | + |
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Preference number: 6 (lower is better) Translates to: FYDVSYHWWITA*IHCPCDLRATV Trigger: GACGGTGGCGCGTAAATCACAAGGACAATGAATCCAGGCAGTGATCCACCAATGATAACTAACATCATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654381.1 ENST00000666767.1 ENST00000666845.1 |
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| CDS TCA 72 bp | TCTAATTCCTATAGCTGGGAGTTACCTCTAGAGGCTTaGTCCGATTCAGATTTGATTTTTCAGCAGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: SNSYSWELPLEA*SDSDLIFQQVL Trigger: CAACACCTGCTGAAAAATCAAATCTGAATCGGATCAAGCCTCTAGAGGTAACTCCCAGCTATAGGAATTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660562.1 |
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| CDS CCA 72 bp | TTTTATGATGTTAGTTATCATTGGTGGATCACTGCCTaGATTCATTGTCCTAGCAGCATTGCAAGTGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: FYDVSYHWWITA*IHCPSSIASAC Trigger: ACAGGCACTTGCAATGCTGCTAGGACAATGAATCCAGGCAGTGATCCACCAATGATAACTAACATCATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654358.1 ENST00000657082.1 ENST00000668126.1 |
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| CDS CCA 72 bp | GGCCATGTATCTTTTTATGATGTTAGTTATCATTGGTaGATCACTGCCTGGATTCATTGTCCTCTAAATGGT | + |
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Preference number: 6 (lower is better) Translates to: GHVSFYDVSYHW*ITAWIHCPLNG Trigger: ACCATTTAGAGGACAATGAATCCAGGCAGTGATCCACCAATGATAACTAACATCATAAAAAGATACATGGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000419459.1 ENST00000659099.1 ENST00000660562.1 ENST00000663564.1 |
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| CDS CCA 72 bp | TCCGGCCATGTATCTTTTTATGATGTTAGTTATCATTaGTGGATCACTGCCTGGATTCATTGTCCTCTAAAT | + |
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Preference number: 6 (lower is better) Translates to: SGHVSFYDVSYH*WITAWIHCPLN Trigger: ATTTAGAGGACAATGAATCCAGGCAGTGATCCACCAATGATAACTAACATCATAAAAAGATACATGGCCGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000419459.1 ENST00000659099.1 ENST00000660562.1 ENST00000663564.1 |
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| CDS CCA 72 bp | TTTTATGATGTTAGTTATCATTGGTGGATCACTGCCTaGATTCATTGTCCTCTGTATACAGGGATCAATTCG | + |
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Preference number: 6 (lower is better) Translates to: FYDVSYHWWITA*IHCPLYTGINS Trigger: CGAATTGATCCCTGTATACAGAGGACAATGAATCCAGGCAGTGATCCACCAATGATAACTAACATCATAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000442515.5 ENST00000658034.1 ENST00000661823.1 |
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| CDS CCA 72 bp | GGCCATGTATCTTTTTATGATGTTAGTTATCATTGGTaGATCACTGCCTGGATTCATTGTCCTCTGTATACA | + |
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Preference number: 6 (lower is better) Translates to: GHVSFYDVSYHW*ITAWIHCPLYT Trigger: TGTATACAGAGGACAATGAATCCAGGCAGTGATCCACCAATGATAACTAACATCATAAAAAGATACATGGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000442515.5 ENST00000658034.1 ENST00000661823.1 |
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