Pregenerated sensors for LINC00639 (Homo sapiens)
Ensembl gene IDs: ENSG00000259070Ensembl transcript IDs: ENST00000553932.5, ENST00000554732.5, ENST00000556116.1, ENST00000557019.6, ENST00000557440.2, ENST00000650718.1, ENST00000653832.1, ENST00000654295.1, ENST00000655593.1, ENST00000658492.1, ENST00000668589.1, ENST00000669541.1, ENST00000670347.1, ENST00000670844.1, ENST00000671669.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGGTCCTGCCACCACAGTCGCTGCATGGCCTTCATGGTTTCTCAGTaGTCCTTGGTCCCGATGGCGGGTACGTGGCACGTCCGTGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: RSCHHSRCMAFMVSQ*SLVPMAGTWHVRGV Trigger: GACACCACGGACGTGCCACGTACCCGCCATCGGGACCAAGGACCACTGAGAAACCATGAAGGCCATGCAGCGACTGTGGTGGCAGGACCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000553932.5 ENST00000554732.5 ENST00000557440.2 ENST00000653832.1 ENST00000654295.1 ENST00000655593.1 ENST00000658492.1 ENST00000670347.1 ENST00000670844.1 |
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| CDS CCA 90 bp | GATCAGAAGAGTTGTGAAGGACCTTGCTGGGTCGTTTGGCAGACCTaGAGTGTAGACCAGGCACAGTCGGTGCCAGCTCAGCAGCGACAG | + |
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Preference number: 5 (lower is better) Translates to: DQKSCEGPCWVVWQT*SVDQAQSVPAQQRQ Trigger: CTGTCGCTGCTGAGCTGGCACCGACTGTGCCTGGTCTACACTCCAGGTCTGCCAAACGACCCAGCAAGGTCCTTCACAACTCTTCTGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000553932.5 ENST00000554732.5 ENST00000557440.2 ENST00000653832.1 ENST00000654295.1 ENST00000655593.1 ENST00000658492.1 ENST00000670347.1 |
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| CDS GCA 90 bp | GATAGGCAGAAGACAAGTTTACTTCTGGAGAGGCCGAACTGGAGGTaGCCTGTGCTCCAGGCACAGCTGAGGGCAGCATTCCATAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: DRQKTSLLLERPNWR*PVLQAQLRAAFHRQ Trigger: TTGCCTATGGAATGCTGCCCTCAGCTGTGCCTGGAGCACAGGGCACCTCCAGTTCGGCCTCTCCAGAAGTAAACTTGTCTTCTGCCTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669541.1 |
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| CDS GCA 90 bp | GATAGGCAGAAGACAAGTTTACTTCTGGAGAGGCCGAACTGGAGGTaGCCTGTGCTCCAGGCACAGCTGAGGGCAGCAATCATCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: DRQKTSLLLERPNWR*PVLQAQLRAAIIFT Trigger: TGTGAAGATGATTGCTGCCCTCAGCTGTGCCTGGAGCACAGGGCACCTCCAGTTCGGCCTCTCCAGAAGTAAACTTGTCTTCTGCCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000556116.1 ENST00000653832.1 ENST00000654295.1 |
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| CDS TCA 90 bp | CAATGTTATATTAAGTCCTCTGGTGTCAGATCACACTCCCTCCTATaGCCAAGAAACGTCACACCTTCTCCCAGCAAGACGATGGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: QCYIKSSGVRSHSLL*PRNVTPSPSKTMVA Trigger: GGCCACCATCGTCTTGCTGGGAGAAGGTGTGACGTTTCTTGGTCATAGGAGGGAGTGTGATCTGACACCAGAGGACTTAATATAACATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000553932.5 ENST00000557440.2 ENST00000654295.1 ENST00000655593.1 ENST00000658492.1 ENST00000670347.1 |
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| CDS GCA 90 bp | GCATCATCTGATTCTGTTCTTTCTCCACCGTCCATACCTAATCCATaGCAAGCCCTGCCTGTGCCCTATAAGAAGATCCTCATGTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: ASSDSVLSPPSIPNP*QALPVPYKKILMLP Trigger: AGGCAACATGAGGATCTTCTTATAGGGCACAGGCAGGGCTTGGCATGGATTAGGTATGGACGGTGGAGAAAGAACAGAATCAGATGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669541.1 |
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| CDS TCA 90 bp | CTTCTTCTTGGCATCAGCTGGAGCTGTATTTTCACCTGGCTCAACTaGGGGAAGATCCACTTCCAACTCACTCATATGGTGTTGACAGGA | + |
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Preference number: 5 (lower is better) Translates to: LLLGISWSCIFTWLN*GKIHFQLTHMVLTG Trigger: TCCTGTCAACACCATATGAGTGAGTTGGAAGTGGATCTTCCCTCAGTTGAGCCAGGTGAAAATACAGCTCCAGCTGATGCCAAGAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669541.1 |
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| CDS GCA 90 bp | CTGCTTCCTTCAGCCAGCTTCAGAGAGTTAGAGCTATGTCCACCCTaGAGAGACATGAGGCATCGTTCATTTCAAGGTGTTGAAATGCAT | + |
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Preference number: 5 (lower is better) Translates to: LLPSASFRELELCPP*RDMRHRSFQGVEMH Trigger: ATGCATTTCAACACCTTGAAATGAACGATGCCTCATGTCTCTGCAGGGTGGACATAGCTCTAACTCTCTGAAGCTGGCTGAAGGAAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654295.1 ENST00000655593.1 |
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| CDS TCA 90 bp | CCGCATTTGATAATAGTAACTACAGCGTGCTTTCGCATCGAGCCTTaGTCTAATTCTGCTCTGAGAACGCGCATACACCAAAGAGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: PHLIIVTTACFRIEP*SNSALRTRIHQRVP Trigger: AGGCACTCTTTGGTGTATGCGCGTTCTCAGAGCAGAATTAGATCAAGGCTCGATGCGAAAGCACGCTGTAGTTACTATTATCAAATGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655593.1 |
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| CDS GCA 90 bp | TCACCTGTCCAACTCAGCTTCAGAGAGTTAGAGCTATGTCCACCCTaGAGAGACATGAGGCATCGTTCATTTCAAGGTGTTGAAATGCAT | + |
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Preference number: 5 (lower is better) Translates to: SPVQLSFRELELCPP*RDMRHRSFQGVEMH Trigger: ATGCATTTCAACACCTTGAAATGAACGATGCCTCATGTCTCTGCAGGGTGGACATAGCTCTAACTCTCTGAAGCTGAGTTGGACAGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557440.2 ENST00000668589.1 |
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| CDS TCA 90 bp | CAATGTTATATTAAGTCCTCTGGTGTCAGATCACACTCCCTCCTATaGCCAAGAAACGTCACACCTTCTCCCTGGAGCTGTATTTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: QCYIKSSGVRSHSLL*PRNVTPSPWSCIFT Trigger: GGTGAAAATACAGCTCCAGGGAGAAGGTGTGACGTTTCTTGGTCATAGGAGGGAGTGTGATCTGACACCAGAGGACTTAATATAACATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650718.1 |
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| CDS GCA 90 bp | ATTCTGTTCTTTCTCCACCGTCCATACCTAATCCATGCCAAGCCCTaGCTGTGCCCTATAAGAAGATCCTCATGTTGCCTTTCAATTCTA | + |
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Preference number: 5 (lower is better) Translates to: ILFFLHRPYLIHAKP*LCPIRRSSCCLSIL Trigger: TAGAATTGAAAGGCAACATGAGGATCTTCTTATAGGGCACAGGCAGGGCTTGGCATGGATTAGGTATGGACGGTGGAGAAAGAACAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669541.1 |
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| CDS GCA 90 bp | GTTATACCGAAAGCAGAGCCTTCTTCTCCTCTGAAAGGTATGCAGTaGCAAACTTCTAATCCCCAGGTTTCGAAAGAGTTACATATCCAG | + |
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Preference number: 5 (lower is better) Translates to: VIPKAEPSSPLKGMQ*QTSNPQVSKELHIQ Trigger: CTGGATATGTAACTCTTTCGAAACCTGGGGATTAGAAGTTTGGCACTGCATACCTTTCAGAGGAGAAGAAGGCTCTGCTTTCGGTATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655593.1 |
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| CDS TCA 90 bp | AGTTCTAGACCCTTGAGGAATCACCACAGTGTCTTCCACAATGGTTaGACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATT | + |
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Preference number: 5 (lower is better) Translates to: SSRPLRNHHSVFHNG*TSLQSHQQCKSVPI Trigger: AATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGACACTGTGGTGATTCCTCAAGGGTCTAGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658492.1 ENST00000670347.1 |
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| CDS TCA 90 bp | GTAATGGGATGGCTGGATCAAATGGTATTTCTAGTTCTAGACCCTTaGGGAATCACCACAGTGTCTTCCACAATGGTTGAACTAGTTTAC | + |
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Preference number: 5 (lower is better) Translates to: VMGWLDQMVFLVLDP*GITTVSSTMVELVY Trigger: GTAAACTAGTTCAACCATTGTGGAAGACACTGTGGTGATTCCTCAAGGGTCTAGAACTAGAAATACCATTTGATCCAGCCATCCCATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658492.1 ENST00000670347.1 |
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| CDS GCA 90 bp | GCCAACTTCATTCTTATCTGGGCCACCCTCAATTTCCCTAAGGACTaGCATTCATTTTATATCTTGTTTTCATCTGGAACTCCTGAACTC | + |
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Preference number: 5 (lower is better) Translates to: ANFILIWATLNFPKD*HSFYILFSSGTPEL Trigger: GAGTTCAGGAGTTCCAGATGAAAACAAGATATAAAATGAATGGCAGTCCTTAGGGAAATTGAGGGTGGCCCAGATAAGAATGAAGTTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669541.1 |
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| CDS TCA 90 bp | TGCTGTTTTAACTCCAGACTTCTCAGAGTTTTTGAACAATCCTCATaGATCCATAAGAGGAACATGACCCGTGTGTCACATATTCACCAC | + |
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Preference number: 5 (lower is better) Translates to: CCFNSRLLRVFEQSS*IHKRNMTRVSHIHH Trigger: GTGGTGAATATGTGACACACGGGTCATGTTCCTCTTATGGATTCATGAGGATTGTTCAAAAACTCTGAGAAGTCTGGAGTTAAAACAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669541.1 |
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| CDS TCA 90 bp | GATATAAAGCAGCTCCAATCTTGGCAGCTCTTGTTCAAGTCAGTTTaGGTTGGGTTCTCTGAAACATCACCAACTGTTTCATTTTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: DIKQLQSWQLLFKSV*VGFSETSPTVSFSH Trigger: ATGAGAAAATGAAACAGTTGGTGATGTTTCAGAGAACCCAACTCAAACTGACTTGAACAAGAGCTGCCAAGATTGGAGCTGCTTTATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669541.1 |
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| CDS CCA 90 bp | TTCGAAAGAGTTACATATCCAGAGTCCCAAATAGTTTTGCAGAACTaGCATCCACAAAAGGACACTTCTAGAGTTGTCTTAAGCACAAAG | + |
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Preference number: 5 (lower is better) Translates to: FERVTYPESQIVLQN*HPQKDTSRVVLSTK Trigger: CTTTGTGCTTAAGACAACTCTAGAAGTGTCCTTTTGTGGATGCCAGTTCTGCAAAACTATTTGGGACTCTGGATATGTAACTCTTTCGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655593.1 |
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| CDS TCA 90 bp | GATATAAAGCAGCTCCAATCTTGGCAGCTCTTGTTCAAGTCAGTTTaGGTTGGGTTCTCTGAAACATCACCAACTGTTTCATTTTATCAT | + |
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Preference number: 5 (lower is better) Translates to: DIKQLQSWQLLFKSV*VGFSETSPTVSFYH Trigger: ATGATAAAATGAAACAGTTGGTGATGTTTCAGAGAACCCAACTCAAACTGACTTGAACAAGAGCTGCCAAGATTGGAGCTGCTTTATATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650718.1 |
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| CDS GCA 72 bp | GCTCTGCGTGTGTCCTCCTCGGTCCCGGTGGGCTGCTaGATTGGTTCGCCTCCCTTCCCTGCTGCTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ALRVSSSVPVGC*IGSPPFPAACW Trigger: CCAGCAAGCAGCAGGGAAGGGAGGCGAACCAATGCAGCAGCCCACCGGGACCGAGGAGGACACACGCAGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000553932.5 ENST00000554732.5 ENST00000556116.1 ENST00000557019.6 ENST00000653832.1 ENST00000654295.1 ENST00000658492.1 ENST00000670347.1 ENST00000671669.1 |
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| CDS CCA 72 bp | CACCACAGTCGCTGCATGGCCTTCATGGTTTCTCAGTaGTCCTTGGTCCCGATGGCGGGTACGTGGCACGTC | + |
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Preference number: 6 (lower is better) Translates to: HHSRCMAFMVSQ*SLVPMAGTWHV Trigger: GACGTGCCACGTACCCGCCATCGGGACCAAGGACCACTGAGAAACCATGAAGGCCATGCAGCGACTGTGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000553932.5 ENST00000554732.5 ENST00000557440.2 ENST00000653832.1 ENST00000654295.1 ENST00000655593.1 ENST00000658492.1 ENST00000670347.1 ENST00000670844.1 |
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| CDS CCA 72 bp | GACGGTCCTGCCACCACAGTCGCTGCATGGCCTTCATaGTTTCTCAGTGGTCCTTGGTCCCGATGGCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: DGPATTVAAWPS*FLSGPWSRWRV Trigger: TACCCGCCATCGGGACCAAGGACCACTGAGAAACCATGAAGGCCATGCAGCGACTGTGGTGGCAGGACCGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000553932.5 ENST00000554732.5 ENST00000557440.2 ENST00000653832.1 ENST00000654295.1 ENST00000655593.1 ENST00000658492.1 ENST00000670347.1 ENST00000670844.1 |
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| CDS CAA 72 bp | AGTCGCTGCATGGCCTTCATGGTTTCTCAGTGGTCCTaGGTCCCGATGGCGGGTACGTGGCACGTCCGTGGT | + |
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Preference number: 6 (lower is better) Translates to: SRCMAFMVSQWS*VPMAGTWHVRG Trigger: ACCACGGACGTGCCACGTACCCGCCATCGGGACCAAGGACCACTGAGAAACCATGAAGGCCATGCAGCGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000553932.5 ENST00000554732.5 ENST00000557440.2 ENST00000653832.1 ENST00000654295.1 ENST00000655593.1 ENST00000658492.1 ENST00000670347.1 ENST00000670844.1 |
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| CDS CCA 72 bp | AGTTGTGAAGGACCTTGCTGGGTCGTTTGGCAGACCTaGAGTGTAGACCAGGCACAGTCGGTGCCAGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SCEGPCWVVWQT*SVDQAQSVPAQ Trigger: CTGAGCTGGCACCGACTGTGCCTGGTCTACACTCCAGGTCTGCCAAACGACCCAGCAAGGTCCTTCACAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000553932.5 ENST00000554732.5 ENST00000557440.2 ENST00000653832.1 ENST00000654295.1 ENST00000655593.1 ENST00000658492.1 ENST00000670347.1 |
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| CDS GCA 72 bp | AAGACAAGTTTACTTCTGGAGAGGCCGAACTGGAGGTaGCCTGTGCTCCAGGCACAGCTGAGGGCAGCATTC | + |
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Preference number: 6 (lower is better) Translates to: KTSLLLERPNWR*PVLQAQLRAAF Trigger: GAATGCTGCCCTCAGCTGTGCCTGGAGCACAGGGCACCTCCAGTTCGGCCTCTCCAGAAGTAAACTTGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669541.1 |
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| CDS CCA 72 bp | GATCAGAAGAGTTGTGAAGGACCTTGCTGGGTCGTTTaGCAGACCTGGAGTGTAGACCAGGCACAGTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: DQKSCEGPCWVV*QTWSVDQAQSV Trigger: CACCGACTGTGCCTGGTCTACACTCCAGGTCTGCCAAACGACCCAGCAAGGTCCTTCACAACTCTTCTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000553932.5 ENST00000554732.5 ENST00000557440.2 ENST00000653832.1 ENST00000654295.1 ENST00000655593.1 ENST00000658492.1 ENST00000670347.1 |
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| CDS TCA 72 bp | GGCCGAACTGGAGGTGCCCTGTGCTCCAGGCACAGCTaGGGGCAGCATTCCATAGGCAATATTCAGATTTTT | + |
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Preference number: 6 (lower is better) Translates to: GRTGGALCSRHS*GQHSIGNIQIF Trigger: AAAAATCTGAATATTGCCTATGGAATGCTGCCCTCAGCTGTGCCTGGAGCACAGGGCACCTCCAGTTCGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669541.1 |
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| CDS GCA 72 bp | ACAGGCCCCGGTGTGGGATGTTCCTTCCCCACCATGTaGCCAAGTGTTCTCATTGTTCAATTCCCACCTATG | + |
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Preference number: 6 (lower is better) Translates to: TGPGVGCSFPTM*PSVLIVQFPPM Trigger: CATAGGTGGGAATTGAACAATGAGAACACTTGGGCACATGGTGGGGAAGGAACATCCCACACCGGGGCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658492.1 |
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| CDS CCA 72 bp | AACAAACACAAGATAGGCAGAAGACAAGTTTACTTCTaGAGAGGCCGAACTGGAGGTGCCCTGTGCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: NKHKIGRRQVYF*RGRTGGALCSR Trigger: CCTGGAGCACAGGGCACCTCCAGTTCGGCCTCTCCAGAAGTAAACTTGTCTTCTGCCTATCTTGTGTTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000556116.1 ENST00000653832.1 ENST00000654295.1 ENST00000669541.1 |
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| CDS TCA 72 bp | CCTTCTCCCTGGAGCTGTATTTTCACCTGGCTCAACTaGGGGAAGATCCACTTCCAACTCACTCATATGGTG | + |
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Preference number: 6 (lower is better) Translates to: PSPWSCIFTWLN*GKIHFQLTHMV Trigger: CACCATATGAGTGAGTTGGAAGTGGATCTTCCCTCAGTTGAGCCAGGTGAAAATACAGCTCCAGGGAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650718.1 |
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| CDS GCA 72 bp | TTTCTCCACCGTCCATACCTAATCCATGCCAAGCCCTaGCTGTGCCCTATAAGAAGATCCTCATGTTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: FLHRPYLIHAKP*LCPIRRSSCCL Trigger: AAGGCAACATGAGGATCTTCTTATAGGGCACAGGCAGGGCTTGGCATGGATTAGGTATGGACGGTGGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669541.1 |
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| CDS GCA 72 bp | GATTCTGTTCTTTCTCCACCGTCCATACCTAATCCATaGCAAGCCCTGCCTGTGCCCTATAAGAAGATCCTC | + |
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Preference number: 6 (lower is better) Translates to: DSVLSPPSIPNP*QALPVPYKKIL Trigger: GAGGATCTTCTTATAGGGCACAGGCAGGGCTTGGCATGGATTAGGTATGGACGGTGGAGAAAGAACAGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669541.1 |
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| CDS TCA 72 bp | CGTGCTTTCGCATCGAGCCTTGATCTAATTCTGCTCTaGGAACGCGCATACACCAAAGAGTGCCTCAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: RAFASSLDLILL*ERAYTKECLSF Trigger: AAAACTGAGGCACTCTTTGGTGTATGCGCGTTCTCAGAGCAGAATTAGATCAAGGCTCGATGCGAAAGCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655593.1 |
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| CDS GCA 72 bp | TCAGCCAGCTTCAGAGAGTTAGAGCTATGTCCACCCTaGAGAGACATGAGGCATCGTTCATTTCAAGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: SASFRELELCPP*RDMRHRSFQGV Trigger: AACACCTTGAAATGAACGATGCCTCATGTCTCTGCAGGGTGGACATAGCTCTAACTCTCTGAAGCTGGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654295.1 ENST00000655593.1 |
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| CDS GCA 72 bp | CAACTCAGCTTCAGAGAGTTAGAGCTATGTCCACCCTaGAGAGACATGAGGCATCGTTCATTTCAAGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: QLSFRELELCPP*RDMRHRSFQGV Trigger: AACACCTTGAAATGAACGATGCCTCATGTCTCTGCAGGGTGGACATAGCTCTAACTCTCTGAAGCTGAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557440.2 ENST00000668589.1 |
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| CDS GCA 72 bp | TGCACAACGTGCAGGTTTGTTAGATATGTATACACGTaGCATGTTGGTGTGCTGTACCCAGTAACTCGTCAT | + |
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Preference number: 6 (lower is better) Translates to: CTTCRFVRYVYT*HVGVLYPVTRH Trigger: ATGACGAGTTACTGGGTACAGCACACCAACATGGCACGTGTATACATATCTAACAAACCTGCACGTTGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658492.1 |
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| CDS CCA 72 bp | TGTCACTCTGAGCTTGATTCAGGTCAAGAAAGACTGTaGATGTTTCACCTGTCCAACTCAGCTTCAGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: CHSELDSGQERL*MFHLSNSASES Trigger: ACTCTCTGAAGCTGAGTTGGACAGGTGAAACATCCACAGTCTTTCTTGACCTGAATCAAGCTCAGAGTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557440.2 ENST00000668589.1 |
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| CDS CCA 72 bp | TCTCTGCTTCTTCCCAAAAGCCTCATAGGTAGGGTGTaGCACAGGGCTAATAGAAGACTTTTTCGGATTCTT | + |
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Preference number: 6 (lower is better) Translates to: SLLLPKSLIGRV*HRANRRLFRIL Trigger: AAGAATCCGAAAAAGTCTTCTATTAGCCCTGTGCCACACCCTACCTATGAGGCTTTTGGGAAGAAGCAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653832.1 |
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| CDS CAA 90 bp | CTATTGAGCTTAAGAGAGCATTCGATGCTCCCTGATGAGGTGAGATaGGAATCTCTTTCCACTTCCCAGGATTCTTACAGTACCTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: LLSLREHSMLPDEVR*ESLSTSQDSYSTCV Trigger: TACACAGGTACTGTAAGAATCCTGGGAAGTGGAAAGAGATTCCAATCTCACCTCATCAGGGAGCATCGAATGCTCTCTTAAGCTCAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655593.1 |
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| CDS TCA 72 bp | ATAATAGTAACTACAGCGTGCTTTCGCATCGAGCCTTaGTCTAATTCTGCTCTGAGAACGCGCATACACCAA | + |
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Preference number: 6 (lower is better) Translates to: IIVTTACFRIEP*SNSALRTRIHQ Trigger: TTGGTGTATGCGCGTTCTCAGAGCAGAATTAGATCAAGGCTCGATGCGAAAGCACGCTGTAGTTACTATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655593.1 |
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| CDS TCA 72 bp | CCCTTGAGGAATCACCACAGTGTCTTCCACAATGGTTaGACTAGTTTACAGTCCCACCAACAGTGTAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: PLRNHHSVFHNG*TSLQSHQQCKS Trigger: ACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGACACTGTGGTGATTCCTCAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658492.1 ENST00000670347.1 |
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| CDS GCA 72 bp | ATAATCAGCTTCAGAGAGTTAGAGCTATGTCCACCCTaGAGAGACATGAGGCATCGTTCATTTCAAGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: IISFRELELCPP*RDMRHRSFQGV Trigger: AACACCTTGAAATGAACGATGCCTCATGTCTCTGCAGGGTGGACATAGCTCTAACTCTCTGAAGCTGATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553932.5 ENST00000650718.1 ENST00000658492.1 |
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| CDS GCA 72 bp | AAAGCAGAGCCTTCTTCTCCTCTGAAAGGTATGCAGTaGCAAACTTCTAATCCCCAGGTTTCGAAAGAGTTA | + |
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Preference number: 6 (lower is better) Translates to: KAEPSSPLKGMQ*QTSNPQVSKEL Trigger: TAACTCTTTCGAAACCTGGGGATTAGAAGTTTGGCACTGCATACCTTTCAGAGGAGAAGAAGGCTCTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655593.1 |
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| CDS CCA 72 bp | AACATCACCAACTGTTTCATTTTAGTTCCACATAGCTaGGGAGGCTTCACAATTATGGCAGAAGGCAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: NITNCFILVPHS*GGFTIMAEGKE Trigger: CTCCTTGCCTTCTGCCATAATTGTGAAGCCTCCCCAGCTATGTGGAACTAAAATGAAACAGTTGGTGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554732.5 |
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| CDS CAA 72 bp | TTAAGAGAGCATTCGATGCTCCCTGATGAGGTGAGATaGGAATCTCTTTCCACTTCCCAGGATTCTTACAGT | + |
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Preference number: 6 (lower is better) Translates to: LREHSMLPDEVR*ESLSTSQDSYS Trigger: ACTGTAAGAATCCTGGGAAGTGGAAAGAGATTCCAATCTCACCTCATCAGGGAGCATCGAATGCTCTCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655593.1 |
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| CDS CAA 90 bp | GAATCGTGTGAACATTACGAATTGTTGAATCATGCTTCTCTCAACTaGTTGGCTGCTAGAAAGTTCAGCGCTCATTCTGTGATCCACCTC | + |
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Preference number: 6 (lower is better) Translates to: ESCEHYELLNHASLN*LAARKFSAHSVIHL Trigger: GAGGTGGATCACAGAATGAGCGCTGAACTTTCTAGCAGCCAACAAGTTGAGAGAAGCATGATTCAACAATTCGTAATGTTCACACGATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653832.1 ENST00000670844.1 ENST00000671669.1 |
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| CDS CAA 90 bp | AGTGTTGACTTTCCCAACTATAAAATTGCACCAAAGAATGGACTTTaGTGTCCACCTGCTTCCTTCAGCCAGCTTCAGAGAGTTAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: SVDFPNYKIAPKNGL*CPPASFSQLQRVRA Trigger: AGCTCTAACTCTCTGAAGCTGGCTGAAGGAAGCAGGTGGACACAAAAGTCCATTCTTTGGTGCAATTTTATAGTTGGGAAAGTCAACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654295.1 ENST00000655593.1 |
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| CDS CAA 90 bp | TTGTGTTCATTTGGCCACACAGTGTTGACTTTCCCAACTATAAAATaGCACCAAAGAATGGACTTTTGTGTCCACCTGCTTCCTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LCSFGHTVLTFPTIK*HQRMDFCVHLLPSA Trigger: GGCTGAAGGAAGCAGGTGGACACAAAAGTCCATTCTTTGGTGCAATTTTATAGTTGGGAAAGTCAACACTGTGTGGCCAAATGAACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654295.1 ENST00000655593.1 |
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| CDS TCA 72 bp | TGGCTGGATCAAATGGTATTTCTAGTTCTAGACCCTTaGGGAATCACCACAGTGTCTTCCACAATGGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: WLDQMVFLVLDP*GITTVSSTMVE Trigger: TTCAACCATTGTGGAAGACACTGTGGTGATTCCTCAAGGGTCTAGAACTAGAAATACCATTTGATCCAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658492.1 ENST00000670347.1 |
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| CDS CAA 72 bp | TTTCCCAACTATAAAATTGCACCAAAGAATGGACTTTaGTGTCCACCTGCTTCCTTCAGCCAGCTTCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: FPNYKIAPKNGL*CPPASFSQLQR Trigger: TCTCTGAAGCTGGCTGAAGGAAGCAGGTGGACACAAAAGTCCATTCTTTGGTGCAATTTTATAGTTGGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654295.1 ENST00000655593.1 |
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| CDS CCA 72 bp | TGCCTAATTATGCACACTCCTCTCGTGAGGATCATTTaGGAGAAATTCTCTCTGGTCTCAATTTCAGGAATA | + |
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Preference number: 6 (lower is better) Translates to: CLIMHTPLVRII*EKFSLVSISGI Trigger: TATTCCTGAAATTGAGACCAGAGAGAATTTCTCCCAAATGATCCTCACGAGAGGAGTGTGCATAATTAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653832.1 ENST00000670844.1 ENST00000671669.1 |
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| CDS CAA 72 bp | TTGCCTAATTATGCACACTCCTCTCGTGAGGATCATTaGGGAGAAATTCTCTCTGGTCTCAATTTCAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: LPNYAHSSREDH*GEILSGLNFRN Trigger: ATTCCTGAAATTGAGACCAGAGAGAATTTCTCCCAAATGATCCTCACGAGAGGAGTGTGCATAATTAGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653832.1 ENST00000670844.1 ENST00000671669.1 |
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| CDS CCA 72 bp | GTTACATATCCAGAGTCCCAAATAGTTTTGCAGAACTaGCATCCACAAAAGGACACTTCTAGAGTTGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: VTYPESQIVLQN*HPQKDTSRVVL Trigger: TAAGACAACTCTAGAAGTGTCCTTTTGTGGATGCCAGTTCTGCAAAACTATTTGGGACTCTGGATATGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655593.1 |
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| CDS CAA 72 bp | TTTCTGTTAGCCAACTATCTCTTTGATCAAATGCAGTaGTGTTCATTTGGCCACACAGTGTTGACTTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: FLLANYLFDQMQ*CSFGHTVLTFP Trigger: TGGGAAAGTCAACACTGTGTGGCCAAATGAACACAACTGCATTTGATCAAAGAGATAGTTGGCTAACAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654295.1 ENST00000655593.1 |
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| CDS CAA 72 bp | TTCGAAAGAGTTACATATCCAGAGTCCCAAATAGTTTaGCAGAACTGGCATCCACAAAAGGACACTTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: FERVTYPESQIV*QNWHPQKDTSR Trigger: TCTAGAAGTGTCCTTTTGTGGATGCCAGTTCTGCAAAACTATTTGGGACTCTGGATATGTAACTCTTTCGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655593.1 |
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| CDS CAA 72 bp | TGCATGTGTCTGTATAGCAGCATGATTTATAATCCTTaGGGTATATACCCAGTAATGGGATGGCTGGATCAA | + |
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Preference number: 6 (lower is better) Translates to: CMCLYSSMIYNP*GIYPVMGWLDQ Trigger: TTGATCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTGCTATACAGACACATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658492.1 ENST00000670347.1 |
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| CDS CAA 90 bp | AAAATATTGTTGCCTAATTATGCACACTCCTCTCGTGAGGATCATTaGGGAGAAATTCTCTCTGGTCTCAATTTCAGGAATAGTCACACT | + |
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Preference number: 6 (lower is better) Translates to: KILLPNYAHSSREDH*GEILSGLNFRNSHT Trigger: AGTGTGACTATTCCTGAAATTGAGACCAGAGAGAATTTCTCCCAAATGATCCTCACGAGAGGAGTGTGCATAATTAGGCAACAATATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653832.1 ENST00000670844.1 ENST00000671669.1 |
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| CDS CAA 90 bp | ACATACGTGTGCATGTGTCTGTATAGCAGCATGATTTATAATCCTTaGGGTATATACCCAGTAATGGGATGGCTGGATCAAATGGTATTT | + |
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Preference number: 6 (lower is better) Translates to: TYVCMCLYSSMIYNP*GIYPVMGWLDQMVF Trigger: AAATACCATTTGATCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTGCTATACAGACACATGCACACGTATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658492.1 ENST00000670347.1 |
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| CDS GCA 72 bp | ATTCTTATCTGGGCCACCCTCAATTTCCCTAAGGACTaGCATTCATTTTATATCTTGTTTTCATCTGGAACT | + |
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Preference number: 6 (lower is better) Translates to: ILIWATLNFPKD*HSFYILFSSGT Trigger: AGTTCCAGATGAAAACAAGATATAAAATGAATGGCAGTCCTTAGGGAAATTGAGGGTGGCCCAGATAAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669541.1 |
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| CDS CAA 72 bp | GATCAAATGCAGTTGTGTTCATTTGGCCACACAGTGTaGACTTTCCCAACTATAAAATTGCACCAAAGAATG | + |
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Preference number: 6 (lower is better) Translates to: DQMQLCSFGHTV*TFPTIKLHQRM Trigger: CATTCTTTGGTGCAATTTTATAGTTGGGAAAGTCAACACTGTGTGGCCAAATGAACACAACTGCATTTGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654295.1 ENST00000655593.1 |
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| CDS CCA 72 bp | ATTTATAATCCTTTGGGTATATACCCAGTAATGGGATaGCTGGATCAAATGGTATTTCTAGTTCTAGACCCT | + |
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Preference number: 6 (lower is better) Translates to: IYNPLGIYPVMG*LDQMVFLVLDP Trigger: AGGGTCTAGAACTAGAAATACCATTTGATCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658492.1 ENST00000670347.1 |
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| CDS CCA 72 bp | GTCTTTAGTTGGATGCTTACAAATATCTTCAGTGTGTaGGATGCTTTAGAAAATTTAAACATTGACTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: VFSWMLTNIFSV*DALENLNIDCA Trigger: GGCACAGTCAATGTTTAAATTTTCTAAAGCATCCCACACACTGAAGATATTTGTAAGCATCCAACTAAAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655593.1 |
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| CDS CAA 72 bp | GTAAACACTGATTTCTCTTGTTCAAGTCAGTTTGAGTaGGGTTCTCTGAAACATCACCAACTGTTTCATTTT | + |
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Preference number: 6 (lower is better) Translates to: VNTDFSCSSQFE*GSLKHHQLFHF Trigger: AAAATGAAACAGTTGGTGATGTTTCAGAGAACCCAACTCAAACTGACTTGAACAAGAGAAATCAGTGTTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000553932.5 ENST00000554732.5 ENST00000557019.6 ENST00000654295.1 ENST00000671669.1 |
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