Pregenerated sensors for LINC00636 (Homo sapiens)
Ensembl gene IDs: ENSG00000240423Ensembl transcript IDs: ENST00000494231.1, ENST00000649048.1, ENST00000661824.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCGAGCCGACCCGGGCTTGATGAAGTCCCGGGCAGCCCGCGAGGCTaGAGTGTGTCACGCACCAGCTCCCGGCGGCGTCCTCTTCCCCGC | + |
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Preference number: 5 (lower is better) Translates to: PSRPGLDEVPGSPRG*SVSRTSSRRRPLPR Trigger: GCGGGGAAGAGGACGCCGCCGGGAGCTGGTGCGTGACACACTGCAGCCTCGCGGGCTGCCCGGGACTTCATCAAGCCCGGGTCGGCTCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS GCA 90 bp | TATATGGGCGGTGACTTCCACCATTGGGGCAAACGGACCTGGAAATaGCGAGATGTCCCAGGAAGTCTGGAGCTGATGGAGCCCGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: YMGGDFHHWGKRTWK*RDVPGSLELMEPVS Trigger: GGACACGGGCTCCATCAGCTCCAGACTTCCTGGGACATCTCGGCATTTCCAGGTCCGTTTGCCCCAATGGTGGAAGTCACCGCCCATATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS CCA 90 bp | GGGGAAGCTAGGTTGGAAACCCTTGTCAACATGCAGTCAAGTCTATaGTTAGAACTGGCCAGTGTGCGCCCTGCATCTGCGGGAGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: GEARLETLVNMQSSL*LELASVRPASAGGS Trigger: GGACCCTCCCGCAGATGCAGGGCGCACACTGGCCAGTTCTAACCATAGACTTGACTGCATGTTGACAAGGGTTTCCAACCTAGCTTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS CCA 90 bp | TCCTCATATATGGGCGGTGACTTCCACCATTGGGGCAAACGGACCTaGAAATGCCGAGATGTCCCAGGAAGTCTGGAGCTGATGGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: SSYMGGDFHHWGKRT*KCRDVPGSLELMEP Trigger: GGGCTCCATCAGCTCCAGACTTCCTGGGACATCTCGGCATTTCCAGGTCCGTTTGCCCCAATGGTGGAAGTCACCGCCCATATATGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS GCA 90 bp | CGCATGTTTGCATTTGCCGGGCACTGTTGTAGGGACTGGGGATGCTaGAGTGAACAAGATGGACAAAGTCCTTGCCTCCTCCCAGAACCT | + |
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Preference number: 5 (lower is better) Translates to: RMFAFAGHCCRDWGC*SEQDGQSPCLLPEP Trigger: AGGTTCTGGGAGGAGGCAAGGACTTTGTCCATCTTGTTCACTGCAGCATCCCCAGTCCCTACAACAGTGCCCGGCAAATGCAAACATGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649048.1 |
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| CDS GCA 90 bp | CAGCGCATGTTTGCATTTGCCGGGCACTGTTGTAGGGACTGGGGATaGTGCAGTGAACAAGATGGACAAAGTCCTTGCCTCCTCCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: QRMFAFAGHCCRDWG*CSEQDGQSPCLLPE Trigger: TTCTGGGAGGAGGCAAGGACTTTGTCCATCTTGTTCACTGCAGCATCCCCAGTCCCTACAACAGTGCCCGGCAAATGCAAACATGCGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649048.1 |
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| CDS TCA 90 bp | GAGACGGAAGGAGGGAAATTGCAGCTATTTACAGCAACCACCATCTaGGCAAGGACTGATTCATGCAGTACCTCGGGGAAGCTAGGTTGG | + |
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Preference number: 5 (lower is better) Translates to: ETEGGKLQLFTATTI*ARTDSCSTSGKLGW Trigger: CCAACCTAGCTTCCCCGAGGTACTGCATGAATCAGTCCTTGCTCAGATGGTGGTTGCTGTAAATAGCTGCAATTTCCCTCCTTCCGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS TCA 90 bp | GCAAACGGACCTGGAAATGCCGAGATGTCCCAGGAAGTCTGGAGCTaGTGGAGCCCGTGTCCATCTCACCAAGACCTTAAATATAATGCA | + |
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Preference number: 5 (lower is better) Translates to: ANGPGNAEMSQEVWS*WSPCPSHQDLKYNA Trigger: TGCATTATATTTAAGGTCTTGGTGAGATGGACACGGGCTCCATCAGCTCCAGACTTCCTGGGACATCTCGGCATTTCCAGGTCCGTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS GCA 90 bp | GCCCGTGTCCATCTCACCAAGACCTTAAATATAATGCAGAGTCCCTaGTGCAAATCCATTCCCATCCGTGCTTTGAGACGGAAGGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: ARVHLTKTLNIMQSP*CKSIPIRALRRKEG Trigger: TCCCTCCTTCCGTCTCAAAGCACGGATGGGAATGGATTTGCAGCAGGGACTCTGCATTATATTTAAGGTCTTGGTGAGATGGACACGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS CCA 90 bp | CTGCAATTTTCCAGGACAAGAACCCCAACTTCCCTTAGCATAGCTTaGCATTTGGCTAGGCCCGAAGTCATCCAGCTTCTGGCAACAGAT | + |
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Preference number: 5 (lower is better) Translates to: LQFSRTRTPTSLSIA*HLARPEVIQLLATD Trigger: ATCTGTTGCCAGAAGCTGGATGACTTCGGGCCTAGCCAAATGCCAAGCTATGCTAAGGGAAGTTGGGGTTCTTGTCCTGGAAAATTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000494231.1 ENST00000649048.1 |
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| CDS CCA 90 bp | CAGATCATTTTCTTCCTCAGGTCCAGTAGGATGTGCTCTTGCCTGTaGGAGCCTTTCCCAAGGCCTGAAGTTAACCATTCATTCAGCGCA | + |
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Preference number: 5 (lower is better) Translates to: QIIFFLRSSRMCSCL*EPFPRPEVNHSFSA Trigger: TGCGCTGAATGAATGGTTAACTTCAGGCCTTGGGAAAGGCTCCCACAGGCAAGAGCACATCCTACTGGACCTGAGGAAGAAAATGATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649048.1 |
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| CDS TCA 90 bp | AGGGAAATTGCAGCTATTTACAGCAACCACCATCTGAGCAAGGACTaGTTCATGCAGTACCTCGGGGAAGCTAGGTTGGAAACCCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: REIAAIYSNHHLSKD*FMQYLGEARLETLV Trigger: GACAAGGGTTTCCAACCTAGCTTCCCCGAGGTACTGCATGAATCAGTCCTTGCTCAGATGGTGGTTGCTGTAAATAGCTGCAATTTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS TCA 90 bp | TCCCAAATGCTAGGTGTGGACATTTATTTCCTCATATATGGGCGGTaGCTTCCACCATTGGGGCAAACGGACCTGGAAATGCCGAGATGT | + |
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Preference number: 5 (lower is better) Translates to: SQMLGVDIYFLIYGR*LPPLGQTDLEMPRC Trigger: ACATCTCGGCATTTCCAGGTCCGTTTGCCCCAATGGTGGAAGTCACCGCCCATATATGAGGAAATAAATGTCCACACCTAGCATTTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000494231.1 ENST00000649048.1 |
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| CDS CCA 90 bp | CACGTTATCCCAAATGCTAGGTGTGGACATTTATTTCCTCATATATaGGCGGTGACTTCCACCATTGGGGCAAACGGACCTGGAAATGCC | + |
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Preference number: 5 (lower is better) Translates to: HVIPNARCGHLFPHI*AVTSTIGANGPGNA Trigger: GGCATTTCCAGGTCCGTTTGCCCCAATGGTGGAAGTCACCGCCCATATATGAGGAAATAAATGTCCACACCTAGCATTTGGGATAACGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494231.1 |
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| CDS GCA 90 bp | CGTGTCCATCTCACCAAGACCTTAAATATAATGCAGAGTCCCTGCTaGAAATCCATTCCCATCCGTGCTTTGAGACGGAAGGAGGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: RVHLTKTLNIMQSPC*KSIPIRALRRKEGN Trigger: ATTTCCCTCCTTCCGTCTCAAAGCACGGATGGGAATGGATTTGCAGCAGGGACTCTGCATTATATTTAAGGTCTTGGTGAGATGGACACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS GCA 90 bp | TGCAAATCCATTCCCATCCGTGCTTTGAGACGGAAGGAGGGAAATTaGAGCTATTTACAGCAACCACCATCTGAGCAAGGACTGATTCAT | + |
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Preference number: 5 (lower is better) Translates to: CKSIPIRALRRKEGN*SYLQQPPSEQGLIH Trigger: ATGAATCAGTCCTTGCTCAGATGGTGGTTGCTGTAAATAGCTGCAATTTCCCTCCTTCCGTCTCAAAGCACGGATGGGAATGGATTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS CCA 72 bp | ATGGGCGGTGACTTCCACCATTGGGGCAAACGGACCTaGAAATGCCGAGATGTCCCAGGAAGTCTGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: MGGDFHHWGKRT*KCRDVPGSLEL Trigger: CAGCTCCAGACTTCCTGGGACATCTCGGCATTTCCAGGTCCGTTTGCCCCAATGGTGGAAGTCACCGCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS GCA 72 bp | TCTATGGTTAGAACTGGCCAGTGTGCGCCCTGCATCTaGGGGAGGGTCCGGGGGCCATTTGGAATTTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SMVRTGQCAPCI*GRVRGPFGIWF Trigger: AAACCAAATTCCAAATGGCCCCCGGACCCTCCCGCAGATGCAGGGCGCACACTGGCCAGTTCTAACCATAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS GCA 72 bp | GGTGACTTCCACCATTGGGGCAAACGGACCTGGAAATaGCGAGATGTCCCAGGAAGTCTGGAGCTGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: GDFHHWGKRTWK*RDVPGSLELME Trigger: CTCCATCAGCTCCAGACTTCCTGGGACATCTCGGCATTTCCAGGTCCGTTTGCCCCAATGGTGGAAGTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS TCA 72 bp | CCTGGAAATGCCGAGATGTCCCAGGAAGTCTGGAGCTaGTGGAGCCCGTGTCCATCTCACCAAGACCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: PGNAEMSQEVWS*WSPCPSHQDLK Trigger: TTTAAGGTCTTGGTGAGATGGACACGGGCTCCATCAGCTCCAGACTTCCTGGGACATCTCGGCATTTCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS CCA 72 bp | CTTGGCATTTGGCTAGGCCCGAAGTCATCCAGCTTCTaGCAACAGATCATTCTCCAGGCAGTGGGTATGGAC | + |
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Preference number: 6 (lower is better) Translates to: LGIWLGPKSSSF*QQIILQAVGMD Trigger: GTCCATACCCACTGCCTGGAGAATGATCTGTTGCCAGAAGCTGGATGACTTCGGGCCTAGCCAAATGCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000494231.1 ENST00000649048.1 |
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| CDS CAA 90 bp | GAGCCTTTCCCAAGGCCTGAAGTTAACCATTCATTCAGCGCATGTTaGCATTTGCCGGGCACTGTTGTAGGGACTGGGGATGCTGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: EPFPRPEVNHSFSAC*HLPGTVVGTGDAAV Trigger: CACTGCAGCATCCCCAGTCCCTACAACAGTGCCCGGCAAATGCAAACATGCGCTGAATGAATGGTTAACTTCAGGCCTTGGGAAAGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649048.1 |
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| CDS GCA 72 bp | GGACAGATCATTTTCTTCCTCAGGTCCAGTAGGATGTaGTCTTGCCTGTGGGAGCCTTTCCCAAGGCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: GQIIFFLRSSRM*SCLWEPFPRPE Trigger: TTCAGGCCTTGGGAAAGGCTCCCACAGGCAAGAGCACATCCTACTGGACCTGAGGAAGAAAATGATCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649048.1 |
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| CDS CCA 72 bp | AGGTTGGAAACCCTTGTCAACATGCAGTCAAGTCTATaGTTAGAACTGGCCAGTGTGCGCCCTGCATCTGCG | + |
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Preference number: 6 (lower is better) Translates to: RLETLVNMQSSL*LELASVRPASA Trigger: CGCAGATGCAGGGCGCACACTGGCCAGTTCTAACCATAGACTTGACTGCATGTTGACAAGGGTTTCCAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS CCA 72 bp | CGCATGTTTGCATTTGCCGGGCACTGTTGTAGGGACTaGGGATGCTGCAGTGAACAAGATGGACAAAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: RMFAFAGHCCRD*GCCSEQDGQSP Trigger: AGGACTTTGTCCATCTTGTTCACTGCAGCATCCCCAGTCCCTACAACAGTGCCCGGCAAATGCAAACATGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649048.1 |
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| CDS CAA 90 bp | TTCCCAAGGCCTGAAGTTAACCATTCATTCAGCGCATGTTTGCATTaGCCGGGCACTGTTGTAGGGACTGGGGATGCTGCAGTGAACAAG | + |
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Preference number: 6 (lower is better) Translates to: FPRPEVNHSFSACLH*PGTVVGTGDAAVNK Trigger: CTTGTTCACTGCAGCATCCCCAGTCCCTACAACAGTGCCCGGCAAATGCAAACATGCGCTGAATGAATGGTTAACTTCAGGCCTTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649048.1 |
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| CDS CCA 72 bp | TTCTTCCTCAGGTCCAGTAGGATGTGCTCTTGCCTGTaGGAGCCTTTCCCAAGGCCTGAAGTTAACCATTCA | + |
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Preference number: 6 (lower is better) Translates to: FFLRSSRMCSCL*EPFPRPEVNHS Trigger: TGAATGGTTAACTTCAGGCCTTGGGAAAGGCTCCCACAGGCAAGAGCACATCCTACTGGACCTGAGGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649048.1 |
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| CDS CAA 72 bp | ACAAGAACCCCAACTTCCCTTAGCATAGCTTGGCATTaGGCTAGGCCCGAAGTCATCCAGCTTCTGGCAACA | + |
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Preference number: 6 (lower is better) Translates to: TRTPTSLSIAWH*ARPEVIQLLAT Trigger: TGTTGCCAGAAGCTGGATGACTTCGGGCCTAGCCAAATGCCAAGCTATGCTAAGGGAAGTTGGGGTTCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000494231.1 ENST00000649048.1 |
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| CDS CAA 72 bp | CCTGAAGTTAACCATTCATTCAGCGCATGTTTGCATTaGCCGGGCACTGTTGTAGGGACTGGGGATGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: PEVNHSFSACLH*PGTVVGTGDAA Trigger: TGCAGCATCCCCAGTCCCTACAACAGTGCCCGGCAAATGCAAACATGCGCTGAATGAATGGTTAACTTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649048.1 |
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| CDS TCA 72 bp | GCAGCTATTTACAGCAACCACCATCTGAGCAAGGACTaGTTCATGCAGTACCTCGGGGAAGCTAGGTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: AAIYSNHHLSKD*FMQYLGEARLE Trigger: TTCCAACCTAGCTTCCCCGAGGTACTGCATGAATCAGTCCTTGCTCAGATGGTGGTTGCTGTAAATAGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS TCA 72 bp | GGAGGGAAATTGCAGCTATTTACAGCAACCACCATCTaGGCAAGGACTGATTCATGCAGTACCTCGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: GGKLQLFTATTI*ARTDSCSTSGK Trigger: CTTCCCCGAGGTACTGCATGAATCAGTCCTTGCTCAGATGGTGGTTGCTGTAAATAGCTGCAATTTCCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS TCA 72 bp | AGAGTCCCTGCTGCAAATCCATTCCCATCCGTGCTTTaGGACGGAAGGAGGGAAATTGCAGCTATTTACAGC | + |
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Preference number: 6 (lower is better) Translates to: RVPAANPFPSVL*DGRREIAAIYS Trigger: GCTGTAAATAGCTGCAATTTCCCTCCTTCCGTCTCAAAGCACGGATGGGAATGGATTTGCAGCAGGGACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS GCA 72 bp | GGACAGATCATTTTCTTCCTCAGGTCCAGTAGGATGTaGTCTTGCCTGTGGGAGCTTGGATCTCCCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: GQIIFFLRSSRM*SCLWELGSPFK Trigger: TTTGAAGGGAGATCCAAGCTCCCACAGGCAAGAGCACATCCTACTGGACCTGAGGAAGAAAATGATCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494231.1 |
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| CDS CCA 72 bp | TTTATTTCCTCATATATGGGCGGTGACTTCCACCATTaGGGCAAACGGACCTGGAAATGCCGAGATGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: FISSYMGGDFHH*GKRTWKCRDVP Trigger: TGGGACATCTCGGCATTTCCAGGTCCGTTTGCCCCAATGGTGGAAGTCACCGCCCATATATGAGGAAATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS CAA 72 bp | CAGAGTCCCTGCTGCAAATCCATTCCCATCCGTGCTTaGAGACGGAAGGAGGGAAATTGCAGCTATTTACAG | + |
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Preference number: 6 (lower is better) Translates to: QSPCCKSIPIRA*RRKEGNCSYLQ Trigger: CTGTAAATAGCTGCAATTTCCCTCCTTCCGTCTCAAAGCACGGATGGGAATGGATTTGCAGCAGGGACTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS CAA 90 bp | TTTTCCAGGACAAGAACCCCAACTTCCCTTAGCATAGCTTGGCATTaGGCTAGGCCCGAAGTCATCCAGCTTCTGGCAACAGATCATTCT | + |
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Preference number: 6 (lower is better) Translates to: FSRTRTPTSLSIAWH*ARPEVIQLLATDHS Trigger: AGAATGATCTGTTGCCAGAAGCTGGATGACTTCGGGCCTAGCCAAATGCCAAGCTATGCTAAGGGAAGTTGGGGTTCTTGTCCTGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000494231.1 ENST00000649048.1 |
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| CDS GCA 72 bp | ATTCCCATCCGTGCTTTGAGACGGAAGGAGGGAAATTaGAGCTATTTACAGCAACCACCATCTGAGCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: IPIRALRRKEGN*SYLQQPPSEQG Trigger: TCCTTGCTCAGATGGTGGTTGCTGTAAATAGCTGCAATTTCCCTCCTTCCGTCTCAAAGCACGGATGGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS CCA 72 bp | AGGACTGATTCATGCAGTACCTCGGGGAAGCTAGGTTaGAAACCCTTGTCAACATGCAGTCAAGTCTATGGT | + |
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Preference number: 6 (lower is better) Translates to: RTDSCSTSGKLG*KPLSTCSQVYG Trigger: ACCATAGACTTGACTGCATGTTGACAAGGGTTTCCAACCTAGCTTCCCCGAGGTACTGCATGAATCAGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS CAA 90 bp | AATATAATGCAGAGTCCCTGCTGCAAATCCATTCCCATCCGTGCTTaGAGACGGAAGGAGGGAAATTGCAGCTATTTACAGCAACCACCA | + |
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Preference number: 6 (lower is better) Translates to: NIMQSPCCKSIPIRA*RRKEGNCSYLQQPP Trigger: TGGTGGTTGCTGTAAATAGCTGCAATTTCCCTCCTTCCGTCTCAAAGCACGGATGGGAATGGATTTGCAGCAGGGACTCTGCATTATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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| CDS GCA 72 bp | CTCACCAAGACCTTAAATATAATGCAGAGTCCCTGCTaGAAATCCATTCCCATCCGTGCTTTGAGACGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LTKTLNIMQSPC*KSIPIRALRRK Trigger: CTTCCGTCTCAAAGCACGGATGGGAATGGATTTGCAGCAGGGACTCTGCATTATATTTAAGGTCTTGGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000494231.1 ENST00000649048.1 ENST00000661824.1 |
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