Pregenerated sensors for LINC00624 (Homo sapiens)
Ensembl gene IDs: ENSG00000278811Ensembl transcript IDs: ENST00000619867.4, ENST00000621316.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCCACGTTTATACAGCCAGGATGCCACTGGTGCCAGATGCTCCTGTaGTGTGCCTCTCTCTCTCATCGCCACAGGTATGCTGCAGTAAGC | + |
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Preference number: 5 (lower is better) Translates to: ATFIQPGCHWCQMLL*CASLSHRHRYAAVS Trigger: GCTTACTGCAGCATACCTGTGGCGATGAGAGAGAGAGGCACATCACAGGAGCATCTGGCACCAGTGGCATCCTGGCTGTATAAACGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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| CDS GCA 90 bp | GTTTATACAGCCAGGATGCCACTGGTGCCAGATGCTCCTGTGATGTaGCTCTCTCTCTCATCGCCACAGGTATGCTGCAGTAAGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: VYTARMPLVPDAPVM*LSLSSPQVCCSKPP Trigger: TGGGGGCTTACTGCAGCATACCTGTGGCGATGAGAGAGAGAGGCACATCACAGGAGCATCTGGCACCAGTGGCATCCTGGCTGTATAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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| CDS TCA 90 bp | AGTGCGGACCCAAAGAGTGAGCAGCAGCAAGACTTATTACGAGAGTaGAAGAACAAAGCTCCCACAGCAGGACACCAGAGGGCAGCGGGT | + |
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Preference number: 5 (lower is better) Translates to: SADPKSEQQQDLLRE*KNKAPTAGHQRAAG Trigger: ACCCGCTGCCCTCTGGTGTCCTGCTGTGGGAGCTTTGTTCTTTCACTCTCGTAATAAGTCTTGCTGCTGCTCACTCTTTGGGTCCGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000619867.4 ENST00000621316.1 |
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| CDS GCA 90 bp | CATCTTAAATTCAGGATGCCACTGGTGCCAGATGCTCCTGTGATGTaGCTCTCTCTCTCATCGCCACAGGTATGCTGCAGTAAGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: HLKFRMPLVPDAPVM*LSLSSPQVCCSKPP Trigger: TGGGGGCTTACTGCAGCATACCTGTGGCGATGAGAGAGAGAGGCACATCACAGGAGCATCTGGCACCAGTGGCATCCTGAATTTAAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS TCA 90 bp | GCATCACGAGATCAGAGAATTACAGATGTGACCCTCACTTACAGGTaGGGCCCACTGGTGAATCTCCCCTCCGTACCAGGCAAGTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: ASRDQRITDVTLTYR*GPLVNLPSVPGKLN Trigger: GTTCAACTTGCCTGGTACGGAGGGGAGATTCACCAGTGGGCCTCACCTGTAAGTGAGGGTCACATCTGTAATTCTCTGATCTCGTGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS CCA 90 bp | GTTTGTTCCTTCAGCTGTTCAGATGGGTCCAGAGTTTCTTCCTTCTaGTGGGTTCGTGGTCTCACTCACTCCAGGAATGAAGCCGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: VCSFSCSDGSRVSSF*WVRGLTHSRNEAAD Trigger: GTCTGCGGCTTCATTCCTGGAGTGAGTGAGACCACGAACCCACCAGAAGGAAGAAACTCTGGACCCATCTGAACAGCTGAAGGAACAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000619867.4 ENST00000621316.1 |
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| CDS TCA 90 bp | TGTTTCATCTTAAATTCAGGATGCCACTGGTGCCAGATGCTCCTGTaGTGTGCCTCTCTCTCTCATCGCCACAGGTATGCTGCAGTAAGC | + |
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Preference number: 5 (lower is better) Translates to: CFILNSGCHWCQMLL*CASLSHRHRYAAVS Trigger: GCTTACTGCAGCATACCTGTGGCGATGAGAGAGAGAGGCACATCACAGGAGCATCTGGCACCAGTGGCATCCTGAATTTAAGATGAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS GCA 90 bp | GGCTCATTGCTGAGTTTTCACATGAGACCCAGGTCCAGAAGGCTTTaGACCGTGGCTCCTTTACAATTCTCGGAAAAGTGCTCCTGTTAC | + |
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Preference number: 5 (lower is better) Translates to: GSLLSFHMRPRSRRL*TVAPLQFSEKCSCY Trigger: GTAACAGGAGCACTTTTCCGAGAATTGTAAAGGAGCCACGGTGCAAAGCCTTCTGGACCTGGGTCTCATGTGAAAACTCAGCAATGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS TCA 90 bp | ACCCAGTACAGTGAAGACAAACCTTCAGTAGTGAACGCTTCCCTTTaGTCGATGGCCAGAGGTCAGGACTCTCCAGCAATTCTGATGAAT | + |
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Preference number: 5 (lower is better) Translates to: TQYSEDKPSVVNASL*SMARGQDSPAILMN Trigger: ATTCATCAGAATTGCTGGAGAGTCCTGACCTCTGGCCATCGATCAAAGGGAAGCGTTCACTACTGAAGGTTTGTCTTCACTGTACTGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000619867.4 ENST00000621316.1 |
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| CDS CCA 90 bp | ATCAGGTGGCAGTGTTTGTTCAAACTTAGGTCAACTGTAATGAAATaGGATACCTCAACAGGAAGGCAAACCTGGATCCCTAGCAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: IRWQCLFKLRSTVMK*DTSTGRQTWIPSKA Trigger: TGCCTTGCTAGGGATCCAGGTTTGCCTTCCTGTTGAGGTATCCCATTTCATTACAGTTGACCTAAGTTTGAACAAACACTGCCACCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000619867.4 ENST00000621316.1 |
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| CDS GCA 90 bp | TTCCACAGGAATCCAAGGATGAAAATGGAAGATGTGGCCTACTTCTaGATCACGAGATCAGAGAATTACAGATGTGACCCTCACTTACAG | + |
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Preference number: 5 (lower is better) Translates to: FHRNPRMKMEDVAYF*ITRSENYRCDPHLQ Trigger: CTGTAAGTGAGGGTCACATCTGTAATTCTCTGATCTCGTGATGCAGAAGTAGGCCACATCTTCCATTTTCATCCTTGGATTCCTGTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS CCA 90 bp | CATCGCTATCACTCAAAGTCCATAGTTTACATTCGGGTTCACTCTTaGTGGTGTGCATTCTGTAGGTTTGGACAAATGTACAATACCATG | + |
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Preference number: 5 (lower is better) Translates to: HRYHSKSIVYIRVHS*WCAFCRFGQMYNTM Trigger: CATGGTATTGTACATTTGTCCAAACCTACAGAATGCACACCACCAAGAGTGAACCCGAATGTAAACTATGGACTTTGAGTGATAGCGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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| CDS CCA 90 bp | CGCTATCACTCAAAGTCCATAGTTTACATTCGGGTTCACTCTTGGTaGTGTGCATTCTGTAGGTTTGGACAAATGTACAATACCATGATA | + |
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Preference number: 5 (lower is better) Translates to: RYHSKSIVYIRVHSW*CAFCRFGQMYNTMI Trigger: TATCATGGTATTGTACATTTGTCCAAACCTACAGAATGCACACCACCAAGAGTGAACCCGAATGTAAACTATGGACTTTGAGTGATAGCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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| CDS TCA 90 bp | AAGACTGAGGGCCAGCTTCAGAGAATAGTCCACTCATTAAAGAGTTaGAACAAGGCTGGTATTCAAGAAAGCACACTGAATATTCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: KTEGQLQRIVHSLKS*NKAGIQESTLNILV Trigger: AACTAGAATATTCAGTGTGCTTTCTTGAATACCAGCCTTGTTTCAACTCTTTAATGAGTGGACTATTCTCTGAAGCTGGCCCTCAGTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS CCA 90 bp | CCAGCTTCAGAGAATAGTCCACTCATTAAAGAGTTGAAACAAGGCTaGTATTCAAGAAAGCACACTGAATATTCTAGTTTCTCACACATC | + |
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Preference number: 5 (lower is better) Translates to: PASENSPLIKELKQG*YSRKHTEYSSFSHI Trigger: GATGTGTGAGAAACTAGAATATTCAGTGTGCTTTCTTGAATACCAGCCTTGTTTCAACTCTTTAATGAGTGGACTATTCTCTGAAGCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS TCA 90 bp | TTTGATAGTTCACCTGGGTTCATGAAGAGACCAATTACATGCTATTaGATATTACCTCCAGTTTGTCTTGTCTTTGTCCTACTTTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: FDSSPGFMKRPITCY*ILPPVCLVFVLLLS Trigger: GCTCAAAAGTAGGACAAAGACAAGACAAACTGGAGGTAATATTCAATAGCATGTAATTGGTCTCTTCATGAACCCAGGTGAACTATCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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| CDS TCA 90 bp | AAGGACTATACTGGAAAGCAAGCTTTATACTGGTATATCTCTGTTTaGAAAGATTTATGTAGTTCTTGCTGCTATGCCTCAAAACCAAGT | + |
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Preference number: 5 (lower is better) Translates to: KDYTGKQALYWYISV*KDLCSSCCYASKPS Trigger: ACTTGGTTTTGAGGCATAGCAGCAAGAACTACATAAATCTTTTCAAACAGAGATATACCAGTATAAAGCTTGCTTTCCAGTATAGTCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS GCA 72 bp | GCCAGGATGCCACTGGTGCCAGATGCTCCTGTGATGTaGCTCTCTCTCTCATCGCCACAGGTATGCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: ARMPLVPDAPVM*LSLSSPQVCCS Trigger: ACTGCAGCATACCTGTGGCGATGAGAGAGAGAGGCACATCACAGGAGCATCTGGCACCAGTGGCATCCTGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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| CDS CAA 72 bp | GGTGCTCCGCAGGCTCATCTCAGGCCAGGAGGCTCATaGCTGAGTTTTCACATGAGACCCAGGTCCAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GAPQAHLRPGGS*LSFHMRPRSRR Trigger: CCTTCTGGACCTGGGTCTCATGTGAAAACTCAGCAATGAGCCTCCTGGCCTGAGATGAGCCTGCGGAGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS GCA 72 bp | TTCAGGATGCCACTGGTGCCAGATGCTCCTGTGATGTaGCTCTCTCTCTCATCGCCACAGGTATGCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: FRMPLVPDAPVM*LSLSSPQVCCS Trigger: ACTGCAGCATACCTGTGGCGATGAGAGAGAGAGGCACATCACAGGAGCATCTGGCACCAGTGGCATCCTGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS TCA 72 bp | GATCAGAGAATTACAGATGTGACCCTCACTTACAGGTaGGGCCCACTGGTGAATCTCCCCTCCGTACCAGGC | + |
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Preference number: 6 (lower is better) Translates to: DQRITDVTLTYR*GPLVNLPSVPG Trigger: GCCTGGTACGGAGGGGAGATTCACCAGTGGGCCTCACCTGTAAGTGAGGGTCACATCTGTAATTCTCTGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS GCA 72 bp | TGGAACGTGATGATTCCCCACATTGTCTCTCTAGGTTaGCTCGCTCCCTCCCAGGTCACTGTCATCACCAGT | + |
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Preference number: 6 (lower is better) Translates to: WNVMIPHIVSLG*LAPSQVTVITS Trigger: ACTGGTGATGACAGTGACCTGGGAGGGAGCGAGGCAACCTAGAGAGACAATGTGGGGAATCATCACGTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS CAA 90 bp | ATGACTGTGAACTTTCTGAGGCCCTCATCAGGAGCTGAGCAGATGTaGGTGCCACGTTTATACAGCCAGGATGCCACTGGTGCCAGATGC | + |
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Preference number: 6 (lower is better) Translates to: MTVNFLRPSSGAEQM*VPRLYSQDATGARC Trigger: GCATCTGGCACCAGTGGCATCCTGGCTGTATAAACGTGGCACCAACATCTGCTCAGCTCCTGATGAGGGCCTCAGAAAGTTCACAGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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| CDS CAA 72 bp | GTGCTCCTGTTACGTGCATGTGGACAGATCTTGACCTaGGTTGATGAACCCAGAGTAAGACTGAGGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VLLLRACGQILT*VDEPRVRLRAS Trigger: GCTGGCCCTCAGTCTTACTCTGGGTTCATCAACCAAGGTCAAGATCTGTCCACATGCACGTAACAGGAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS CAA 72 bp | AACTTTCTGAGGCCCTCATCAGGAGCTGAGCAGATGTaGGTGCCACGTTTATACAGCCAGGATGCCACTGGT | + |
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Preference number: 6 (lower is better) Translates to: NFLRPSSGAEQM*VPRLYSQDATG Trigger: ACCAGTGGCATCCTGGCTGTATAAACGTGGCACCAACATCTGCTCAGCTCCTGATGAGGGCCTCAGAAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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| CDS CAA 90 bp | CAAACCTGGATCCCTAGCAAGGCAGAGGGACTTCCTGGTTTAACTTaGTGCTGTTGCTGTGTGCGGAATTCATTCCTTCTGGTGGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: QTWIPSKAEGLPGLT*CCCCVRNSFLLVGS Trigger: AGAACCCACCAGAAGGAATGAATTCCGCACACAGCAACAGCACAAAGTTAAACCAGGAAGTCCCTCTGCCTTGCTAGGGATCCAGGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000619867.4 ENST00000621316.1 |
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| CDS CAA 90 bp | CTCGGAAAAGTGCTCCTGTTACGTGCATGTGGACAGATCTTGACCTaGGTTGATGAACCCAGAGTAAGACTGAGGGCCAGCTTCAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: LGKVLLLRACGQILT*VDEPRVRLRASFRE Trigger: TTCTCTGAAGCTGGCCCTCAGTCTTACTCTGGGTTCATCAACCAAGGTCAAGATCTGTCCACATGCACGTAACAGGAGCACTTTTCCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS GCA 72 bp | CTGAGTTTTCACATGAGACCCAGGTCCAGAAGGCTTTaGACCGTGGCTCCTTTACAATTCTCGGAAAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: LSFHMRPRSRRL*TVAPLQFSEKC Trigger: GCACTTTTCCGAGAATTGTAAAGGAGCCACGGTGCAAAGCCTTCTGGACCTGGGTCTCATGTGAAAACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS CCA 72 bp | TGTGCTGTTGCTGTGTGCGGAATTCATTCCTTCTGGTaGGTTCTTGGTCTCGCTGTCTTCAAGAATGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: CAVAVCGIHSFW*VLGLAVFKNEA Trigger: GGCTTCATTCTTGAAGACAGCGAGACCAAGAACCCACCAGAAGGAATGAATTCCGCACACAGCAACAGCACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000619867.4 ENST00000621316.1 |
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| CDS CAA 72 bp | TTGCTGTGTGCGGAATTCATTCCTTCTGGTGGGTTCTaGGTCTCGCTGTCTTCAAGAATGAAGCCACGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LLCAEFIPSGGF*VSLSSRMKPRR Trigger: TCTCCGTGGCTTCATTCTTGAAGACAGCGAGACCAAGAACCCACCAGAAGGAATGAATTCCGCACACAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000619867.4 ENST00000621316.1 |
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| CDS CAA 72 bp | CAAGGCAGAGGGACTTCCTGGTTTAACTTTGTGCTGTaGCTGTGTGCGGAATTCATTCCTTCTGGTGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: QGRGTSWFNFVL*LCAEFIPSGGF Trigger: GAACCCACCAGAAGGAATGAATTCCGCACACAGCAACAGCACAAAGTTAAACCAGGAAGTCCCTCTGCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000619867.4 ENST00000621316.1 |
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| CDS CAA 72 bp | GCTGAGTTTTCACATGAGACCCAGGTCCAGAAGGCTTaGCACCGTGGCTCCTTTACAATTCTCGGAAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: AEFSHETQVQKA*HRGSFTILGKV Trigger: CACTTTTCCGAGAATTGTAAAGGAGCCACGGTGCAAAGCCTTCTGGACCTGGGTCTCATGTGAAAACTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS CAA 90 bp | ACAATTCTCGGAAAAGTGCTCCTGTTACGTGCATGTGGACAGATCTaGACCTTGGTTGATGAACCCAGAGTAAGACTGAGGGCCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: TILGKVLLLRACGQI*TLVDEPRVRLRASF Trigger: GAAGCTGGCCCTCAGTCTTACTCTGGGTTCATCAACCAAGGTCAAGATCTGTCCACATGCACGTAACAGGAGCACTTTTCCGAGAATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS CAA 90 bp | AGGCTCATTGCTGAGTTTTCACATGAGACCCAGGTCCAGAAGGCTTaGCACCGTGGCTCCTTTACAATTCTCGGAAAAGTGCTCCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: RLIAEFSHETQVQKA*HRGSFTILGKVLLL Trigger: TAACAGGAGCACTTTTCCGAGAATTGTAAAGGAGCCACGGTGCAAAGCCTTCTGGACCTGGGTCTCATGTGAAAACTCAGCAATGAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS TCA 72 bp | AGTGAAGACAAACCTTCAGTAGTGAACGCTTCCCTTTaGTCGATGGCCAGAGGTCAGGACTCTCCAGCAATT | + |
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Preference number: 6 (lower is better) Translates to: SEDKPSVVNASL*SMARGQDSPAI Trigger: AATTGCTGGAGAGTCCTGACCTCTGGCCATCGATCAAAGGGAAGCGTTCACTACTGAAGGTTTGTCTTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000619867.4 ENST00000621316.1 |
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| CDS CAA 72 bp | GGAAAAGTGCTCCTGTTACGTGCATGTGGACAGATCTaGACCTTGGTTGATGAACCCAGAGTAAGACTGAGG | + |
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Preference number: 6 (lower is better) Translates to: GKVLLLRACGQI*TLVDEPRVRLR Trigger: CCTCAGTCTTACTCTGGGTTCATCAACCAAGGTCAAGATCTGTCCACATGCACGTAACAGGAGCACTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS CAA 90 bp | CACAGATTCCCTTGGAGTGTTCTTGTTGTGGATGAAGCTCACAGGTaGAAAAACCAAAGCTCCCTGCTGCATAAGACCTTGTCAGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: HRFPWSVLVVDEAHR*KNQSSLLHKTLSEV Trigger: TACCTCTGACAAGGTCTTATGCAGCAGGGAGCTTTGGTTTTTCAACCTGTGAGCTTCATCCACAACAAGAACACTCCAAGGGAATCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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| CDS CCA 72 bp | CTTTGTGCTGTTGCTGTGTGCGGAATTCATTCCTTCTaGTGGGTTCTTGGTCTCGCTGTCTTCAAGAATGAA | + |
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Preference number: 6 (lower is better) Translates to: LCAVAVCGIHSF*WVLGLAVFKNE Trigger: TTCATTCTTGAAGACAGCGAGACCAAGAACCCACCAGAAGGAATGAATTCCGCACACAGCAACAGCACAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000619867.4 ENST00000621316.1 |
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| CDS CAA 72 bp | CCTTGGAGTGTTCTTGTTGTGGATGAAGCTCACAGGTaGAAAAACCAAAGCTCCCTGCTGCATAAGACCTTG | + |
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Preference number: 6 (lower is better) Translates to: PWSVLVVDEAHR*KNQSSLLHKTL Trigger: CAAGGTCTTATGCAGCAGGGAGCTTTGGTTTTTCAACCTGTGAGCTTCATCCACAACAAGAACACTCCAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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| CDS TCA 72 bp | CTTGGAGTGTTCTTGTTGTGGATGAAGCTCACAGGTTaGAAAACCAAAGCTCCCTGCTGCATAAGACCTTGT | + |
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Preference number: 6 (lower is better) Translates to: LGVFLLWMKLTG*KTKAPCCIRPC Trigger: ACAAGGTCTTATGCAGCAGGGAGCTTTGGTTTTTCAACCTGTGAGCTTCATCCACAACAAGAACACTCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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| CDS GCA 72 bp | AATCCAAGGATGAAAATGGAAGATGTGGCCTACTTCTaGATCACGAGATCAGAGAATTACAGATGTGACCCT | + |
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Preference number: 6 (lower is better) Translates to: NPRMKMEDVAYF*ITRSENYRCDP Trigger: AGGGTCACATCTGTAATTCTCTGATCTCGTGATGCAGAAGTAGGCCACATCTTCCATTTTCATCCTTGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS CCA 72 bp | CAGTGTTTGTTCAAACTTAGGTCAACTGTAATGAAATaGGATACCTCAACAGGAAGGCAAACCTGGATCCCT | + |
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Preference number: 6 (lower is better) Translates to: QCLFKLRSTVMK*DTSTGRQTWIP Trigger: AGGGATCCAGGTTTGCCTTCCTGTTGAGGTATCCCATTTCATTACAGTTGACCTAAGTTTGAACAAACACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000619867.4 ENST00000621316.1 |
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| CDS CAA 72 bp | CACAGAAACATGAAATTCTTTCTCTCTTTCTCTCTCTaGGTAAAGGGGTGCATACTGCAGGAAACAGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: HRNMKFFLSFSL*VKGCILQETVG Trigger: ACCCACTGTTTCCTGCAGTATGCACCCCTTTACCAAGAGAGAGAAAGAGAGAAAGAATTTCATGTTTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS TCA 72 bp | AAGATGGCTTCAGAAGGGGCAGTAGAAGTATTTCCTTaGCATTTTTGTGGGCAGGATAATTCAGATGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: KMASEGAVEVFP*HFCGQDNSDVD Trigger: ATCCACATCTGAATTATCCTGCCCACAAAAATGTCAAGGAAATACTTCTACTGCCCCTTCTGAAGCCATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS TCA 72 bp | TTCTCTGGATCTCTTGCATCATTCTGGCAAAGTAGATaGGAAATACCATTGTACCCTAGATGGGCCCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: FSGSLASFWQSR*EIPLYPRWALF Trigger: AAAAAGGGCCCATCTAGGGTACAATGGTATTTCTCATCTACTTTGCCAGAATGATGCAAGAGATCCAGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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| CDS GCA 72 bp | TATGTAGTTCTTGCTGCTATGCCTCAAAACCAAGTTTaGCATAACTTGAAAAGATCCAGAGAGCACAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: YVVLAAMPQNQV*HNLKRSREHKL Trigger: GAGCTTGTGCTCTCTGGATCTTTTCAAGTTATGGCAAACTTGGTTTTGAGGCATAGCAGCAAGAACTACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS CAA 72 bp | GTCACAGTAGAGCTTTCATGCATCAGGTGGCAGTGTTaGTTCAAACTTAGGTCAACTGTAATGAAATGGGAT | + |
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Preference number: 6 (lower is better) Translates to: VTVELSCIRWQC*FKLRSTVMKWD Trigger: ATCCCATTTCATTACAGTTGACCTAAGTTTGAACAAACACTGCCACCTGATGCATGAAAGCTCTACTGTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000619867.4 ENST00000621316.1 |
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| CDS CAA 72 bp | AGGTTGAAAAACCAAAGCTCCCTGCTGCATAAGACCTaGTCAGAGGTAAACTTACAGTGTAGCCTTAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: RLKNQSSLLHKT*SEVNLQCSLSF Trigger: AAAACTAAGGCTACACTGTAAGTTTACCTCTGACAAGGTCTTATGCAGCAGGGAGCTTTGGTTTTTCAACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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| CDS CAA 90 bp | GAAGCTCACAGGTTGAAAAACCAAAGCTCCCTGCTGCATAAGACCTaGTCAGAGGTAAACTTACAGTGTAGCCTTAGTTTTTATATAACC | + |
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Preference number: 6 (lower is better) Translates to: EAHRLKNQSSLLHKT*SEVNLQCSLSFYIT Trigger: GGTTATATAAAAACTAAGGCTACACTGTAAGTTTACCTCTGACAAGGTCTTATGCAGCAGGGAGCTTTGGTTTTTCAACCTGTGAGCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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| CDS TCA 72 bp | CCTTTTAATTTCAAGGAAGTTGAATACCCAGTACAGTaGAGACAAACCTTCAGTAGTGAACGCTTCCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: PFNFKEVEYPVQ*RQTFSSERFPL Trigger: CAAAGGGAAGCGTTCACTACTGAAGGTTTGTCTTCACTGTACTGGGTATTCAACTTCCTTGAAATTAAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000619867.4 ENST00000621316.1 |
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| CDS CAA 90 bp | AGAGGTCAGGACTCTCCAGCAATTCTGATGAATGTATGTAACTTCTaGGTTCTTTCTCTATTGTTTCATCTTAAATTCAGGATGCCACTG | + |
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Preference number: 6 (lower is better) Translates to: RGQDSPAILMNVCNF*VLSLLFHLKFRMPL Trigger: CAGTGGCATCCTGAATTTAAGATGAAACAATAGAGAAAGAACCAAGAAGTTACATACATTCATCAGAATTGCTGGAGAGTCCTGACCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS TCA 72 bp | TCACCTGGGTTCATGAAGAGACCAATTACATGCTATTaGATATTACCTCCAGTTTGTCTTGTCTTTGTCCTA | + |
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Preference number: 6 (lower is better) Translates to: SPGFMKRPITCY*ILPPVCLVFVL Trigger: TAGGACAAAGACAAGACAAACTGGAGGTAATATTCAATAGCATGTAATTGGTCTCTTCATGAACCCAGGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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| CDS CAA 90 bp | TCAGCATACCACTTTTTATCCTTCTTCCTTTTAATTTCAAGGAAGTaGAATACCCAGTACAGTGAAGACAAACCTTCAGTAGTGAACGCT | + |
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Preference number: 6 (lower is better) Translates to: SAYHFLSFFLLISRK*NTQYSEDKPSVVNA Trigger: AGCGTTCACTACTGAAGGTTTGTCTTCACTGTACTGGGTATTCAACTTCCTTGAAATTAAAAGGAAGAAGGATAAAAAGTGGTATGCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000619867.4 ENST00000621316.1 |
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| CDS CAA 90 bp | CTTTTGAGCATAATACACTTGCTTTCATTCCTTTCTCTGGATCTCTaGCATCATTCTGGCAAAGTAGATGAGAAATACCATTGTACCCTA | + |
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Preference number: 6 (lower is better) Translates to: LLSIIHLLSFLSLDL*HHSGKVDEKYHCTL Trigger: TAGGGTACAATGGTATTTCTCATCTACTTTGCCAGAATGATGCAAGAGATCCAGAGAAAGGAATGAAAGCAAGTGTATTATGCTCAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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| CDS CAA 72 bp | AAGATTGCTCAAGAATCCATTCTGGGGCAGAGTCTGTaGAATAGGTTTATAAATGATGATAAGGAAGGAGTA | + |
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Preference number: 6 (lower is better) Translates to: KIAQESILGQSL*NRFINDDKEGV Trigger: TACTCCTTCCTTATCATCATTTATAAACCTATTCAACAGACTCTGCCCCAGAATGGATTCTTGAGCAATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS CAA 90 bp | GTTCATGAAGAGACCAATTACATGCTATTGAATATTACCTCCAGTTaGTCTTGTCTTTGTCCTACTTTTGAGCATAATACACTTGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: VHEETNYMLLNITSS*SCLCPTFEHNTLAF Trigger: GAAAGCAAGTGTATTATGCTCAAAAGTAGGACAAAGACAAGACAAACTGGAGGTAATATTCAATAGCATGTAATTGGTCTCTTCATGAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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| CDS CCA 72 bp | GAGAATAGTCCACTCATTAAAGAGTTGAAACAAGGCTaGTATTCAAGAAAGCACACTGAATATTCTAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: ENSPLIKELKQG*YSRKHTEYSSF Trigger: GAAACTAGAATATTCAGTGTGCTTTCTTGAATACCAGCCTTGTTTCAACTCTTTAATGAGTGGACTATTCTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS CAA 72 bp | AAATTTTGGCTGATGCAGTTATCAATGACTTTGAAATaGATTCAACTCCTGGAATTAAGATGGCTTCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: KFWLMQLSMTLK*IQLLELRWLQK Trigger: CTTCTGAAGCCATCTTAATTCCAGGAGTTGAATCAATTTCAAAGTCATTGATAACTGCATCAGCCAAAATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS CAA 72 bp | TTGGACAAATTTTGGCTGATGCAGTTATCAATGACTTaGAAATTGATTCAACTCCTGGAATTAAGATGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LDKFWLMQLSMT*KLIQLLELRWL Trigger: AAGCCATCTTAATTCCAGGAGTTGAATCAATTTCAAAGTCATTGATAACTGCATCAGCCAAAATTTGTCCAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621316.1 |
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| CDS CAA 72 bp | GAGACCAATTACATGCTATTGAATATTACCTCCAGTTaGTCTTGTCTTTGTCCTACTTTTGAGCATAATACA | + |
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Preference number: 6 (lower is better) Translates to: ETNYMLLNITSS*SCLCPTFEHNT Trigger: TGTATTATGCTCAAAAGTAGGACAAAGACAAGACAAACTGGAGGTAATATTCAATAGCATGTAATTGGTCTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619867.4 |
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