Pregenerated sensors for LINC00621 (Homo sapiens)
Ensembl gene IDs: ENSG00000262619Ensembl transcript IDs: ENST00000577004.2, ENST00000658532.1, ENST00000663150.1, ENST00000668623.1, ENST00000669934.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCAGACAGGGTGGCGGCCTGGCAGAGGCTGCAATCTCGGCTCTTTaGGAGGCCAAGGCAGGCAGCTGGGAGGTGGTTGTAGCGAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: PRQGGGLAEAAISAL*EAKAGSWEVVVASP Trigger: TGGGCTCGCTACAACCACCTCCCAGCTGCCTGCCTTGGCCTCCCAAAGAGCCGAGATTGCAGCCTCTGCCAGGCCGCCACCCTGTCTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663150.1 ENST00000668623.1 |
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| CDS GCA 90 bp | GAGACGCTCCTCACTTCCCAGACAGGGTGGCGGCCTGGCAGAGGCTaGAATCTCGGCTCTTTGGGAGGCCAAGGCAGGCAGCTGGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: ETLLTSQTGWRPGRG*NLGSLGGQGRQLGG Trigger: ACCTCCCAGCTGCCTGCCTTGGCCTCCCAAAGAGCCGAGATTGCAGCCTCTGCCAGGCCGCCACCCTGTCTGGGAAGTGAGGAGCGTCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663150.1 ENST00000668623.1 |
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| CDS TCA 90 bp | GGCGTGGCGGCGCACGCCTGCAATTTTCGCAGGCACTTGGCAGGCTaGGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCGGAGATGG | + |
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Preference number: 5 (lower is better) Translates to: GVAAHACNFRRHLAG*GRRIRQGGCSERRW Trigger: CCATCTCCGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCAAGTGCCTGCGAAAATTGCAGGCGTGCGCCGCCACGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663150.1 ENST00000668623.1 |
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| CDS GCA 90 bp | GCCTGGGAGGGAAAATGGTTTCCTGGGCTGGGTCCAGGGCCCGCCTaGTGTGTGCAGCCTTTAGACTTGGTGCCCTGCATCCCAGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: AWEGKWFPGLGPGPA*CVQPLDLVPCIPAA Trigger: AGCAGCTGGGATGCAGGGCACCAAGTCTAAAGGCTGCACACAGCAGGCGGGCCCTGGACCCAGCCCAGGAAACCATTTTCCCTCCCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CCA 90 bp | ACCAGTCAGGCGTGGCGGCGCACGCCTGCAATTTTCGCAGGCACTTaGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: TSQAWRRTPAIFAGT*QAEAGESGREVAVS Trigger: GCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCAAGTGCCTGCGAAAATTGCAGGCGTGCGCCGCCACGCCTGACTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663150.1 ENST00000668623.1 |
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| CDS CCA 90 bp | GCAGAGGCTGCAATCTCGGCTCTTTGGGAGGCCAAGGCAGGCAGCTaGGAGGTGGTTGTAGCGAGCCCAGATCACGCCACTGCACTCCAG | + |
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Preference number: 5 (lower is better) Translates to: AEAAISALWEAKAGS*EVVVASPDHATALQ Trigger: CTGGAGTGCAGTGGCGTGATCTGGGCTCGCTACAACCACCTCCCAGCTGCCTGCCTTGGCCTCCCAAAGAGCCGAGATTGCAGCCTCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663150.1 ENST00000668623.1 |
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| CDS CCA 90 bp | CTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATaGGATGGCGGCCGGGAAGAGATGCTCCTCACTTTCCAGACTGGG | + |
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Preference number: 5 (lower is better) Translates to: LRRWAAGQRRSSLPR*DGGREEMLLTFQTG Trigger: CCCAGTCTGGAAAGTGAGGAGCATCTCTTCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663150.1 ENST00000668623.1 |
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| CDS CCA 90 bp | TCAGAGACCTTTGCAACAGCCCCTACCATCACAGGCCCAGAGGCCTaGGAGGGAAAATGGTTTCCTGGGCTGGGTCCAGGGCCCGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SETFATAPTITGPEA*EGKWFPGLGPGPAC Trigger: GCAGGCGGGCCCTGGACCCAGCCCAGGAAACCATTTTCCCTCCCAGGCCTCTGGGCCTGTGATGGTAGGGGCTGTTGCAAAGGTCTCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS GCA 90 bp | GGTCCAGGGCCCGCCTGCTGTGTGCAGCCTTTAGACTTGGTGCCCTaGATCCCAGCTGCTCCAGCCATGGCTAAAAGGGCCAAGGTACAG | + |
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Preference number: 5 (lower is better) Translates to: GPGPACCVQPLDLVP*IPAAPAMAKRAKVQ Trigger: CTGTACCTTGGCCCTTTTAGCCATGGCTGGAGCAGCTGGGATGCAGGGCACCAAGTCTAAAGGCTGCACACAGCAGGCGGGCCCTGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS GCA 90 bp | GAGGGAGAGGGAGACTGGAGGCCTCTGGCTCAGTCTCTCAAAAGCTaGCATCAAGTCACAGGCCAGGGTCATCTCAAGGCTCACCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: EGEGDWRPLAQSLKS*HQVTGQGHLKAHLG Trigger: CCCCAGGTGAGCCTTGAGATGACCCTGGCCTGTGACTTGATGGCAGCTTTTGAGAGACTGAGCCAGAGGCCTCCAGTCTCCCTCTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663150.1 ENST00000668623.1 |
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| CDS GCA 90 bp | ACTCAATGCCAGCCCGCGAAAGCAGCTGGGAGGGGAGCTGTGCCCTaGAAAGTCACAAGGATGGAGCTACCCAAGACCATGGGAACCCAC | + |
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Preference number: 5 (lower is better) Translates to: TQCQPAKAAGRGAVP*KVTRMELPKTMGTH Trigger: GTGGGTTCCCATGGTCTTGGGTAGCTCCATCCTTGTGACTTTGCAGGGCACAGCTCCCCTCCCAGCTGCTTTCGCGGGCTGGCATTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS GCA 90 bp | CAGCCACTCAATGCCAGCCCGCGAAAGCAGCTGGGAGGGGAGCTGTaGCCTGCAAAGTCACAAGGATGGAGCTACCCAAGACCATGGGAA | + |
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Preference number: 5 (lower is better) Translates to: QPLNASPRKQLGGEL*PAKSQGWSYPRPWE Trigger: TTCCCATGGTCTTGGGTAGCTCCATCCTTGTGACTTTGCAGGGCACAGCTCCCCTCCCAGCTGCTTTCGCGGGCTGGCATTGAGTGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CCA 90 bp | ACCTGGAAAAGCCACAGCCACTCAATGCCAGCCCGCGAAAGCAGCTaGGAGGGGAGCTGTGCCCTGCAAAGTCACAAGGATGGAGCTACC | + |
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Preference number: 5 (lower is better) Translates to: TWKSHSHSMPARESS*EGSCALQSHKDGAT Trigger: GGTAGCTCCATCCTTGTGACTTTGCAGGGCACAGCTCCCCTCCCAGCTGCTTTCGCGGGCTGGCATTGAGTGGCTGTGGCTTTTCCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS GCA 90 bp | GGCCACTGTCCTCCAGACCCCAGAATGGTCGATCCACTGACAGTTTaGACCATGAACCTGGAAAAGCCACAGCCACTCAATGCCAGCCCG | + |
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Preference number: 5 (lower is better) Translates to: GHCPPDPRMVDPLTV*TMNLEKPQPLNASP Trigger: CGGGCTGGCATTGAGTGGCTGTGGCTTTTCCAGGTTCATGGTGCAAACTGTCAGTGGATCGACCATTCTGGGGTCTGGAGGACAGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS TCA 90 bp | AAGCCCCTATACAGAGTCTCCATTGGGCACTGCCTAGTGGAGCTGTaGGAAGAGGGCCACTGTCCTCCAGACCCCAGAATGGTCGATCCA | + |
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Preference number: 5 (lower is better) Translates to: KPLYRVSIGHCLVEL*EEGHCPPDPRMVDP Trigger: TGGATCGACCATTCTGGGGTCTGGAGGACAGTGGCCCTCTTCTCACAGCTCCACTAGGCAGTGCCCAATGGAGACTCTGTATAGGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CCA 90 bp | TCATGGAGAACCTCTGCTAGGGCAGTGTGGAAGGGAAATGTGGGGTaGAAGCCCCTATACAGAGTCTCCATTGGGCACTGCCTAGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SWRTSARAVWKGNVG*KPLYRVSIGHCLVE Trigger: CTCCACTAGGCAGTGCCCAATGGAGACTCTGTATAGGGGCTTCCACCCCACATTTCCCTTCCACACTGCCCTAGCAGAGGTTCTCCATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS TCA 90 bp | CATCTGCAAATCAGGGAGACAGCCCTCAGCAGACACAAGACCTGTTaGCGCCTTAATCTTGGACTTCCCAGCCTTCAGAACACAGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: HLQIRETALSRHKTC*RLNLGLPSLQNTGQ Trigger: CTGACCTGTGTTCTGAAGGCTGGGAAGTCCAAGATTAAGGCGTCAACAGGTCTTGTGTCTGCTGAGGGCTGTCTCCCTGATTTGCAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577004.2 ENST00000668623.1 |
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| CDS TCA 90 bp | CATCTGCAAATCAGGGAGACAGCCCTCAGCAGACACAAGACCTGTTaGCGCCTTAATCTTGGACTTCCCAGCCTTCAGAACCCAGACAAC | + |
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Preference number: 5 (lower is better) Translates to: HLQIRETALSRHKTC*RLNLGLPSLQNPDN Trigger: GTTGTCTGGGTTCTGAAGGCTGGGAAGTCCAAGATTAAGGCGTCAACAGGTCTTGTGTCTGCTGAGGGCTGTCTCCCTGATTTGCAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658532.1 ENST00000663150.1 ENST00000669934.1 |
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| CDS TCA 90 bp | CCCATAATCCCCATGTGTCATGGGAGGGATTCAGTGGGAAGTAATTaGATCATGCGGGCGGGTTTTTCCCATGCTGTTCTCATGATAGTG | + |
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Preference number: 5 (lower is better) Translates to: PIIPMCHGRDSVGSN*IMRAGFSHAVLMIV Trigger: CACTATCATGAGAACAGCATGGGAAAAACCCGCCCGCATGATTCAATTACTTCCCACTGAATCCCTCCCATGACACATGGGGATTATGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS TCA 90 bp | GATGGAGCTACCCAAGACCATGGGAACCCACCTCTTGCATCAATGTaGCCTGGATGTGAGACATGGAGTCAAAAGAGATCATTTTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: DGATQDHGNPPLASM*PGCETWSQKRSFWS Trigger: GCTCCAAAATGATCTCTTTTGACTCCATGTCTCACATCCAGGTCACATTGATGCAAGAGGTGGGTTCCCATGGTCTTGGGTAGCTCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CCA 90 bp | CCAAATCTTATCTTGCATTGTAGCTCTCATAATCCCTGTGTGTCATaGGAGGGACCCAGTGGGAGGTATCTGAATCATGGGGGCAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: PNLILHCSSHNPCVS*EGPSGRYLNHGGRF Trigger: AAACCTGCCCCCATGATTCAGATACCTCCCACTGGGTCCCTCCCATGACACACAGGGATTATGAGAGCTACAATGCAAGATAAGATTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CCA 90 bp | CAGGCTGAGGTGGTCTCAGATGGAGATGAGGAACTTGTTGGGAACTaGAGTAAAGGTCACTCTTGCTATGCAAAGAGACTGGTGACATTT | + |
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Preference number: 5 (lower is better) Translates to: QAEVVSDGDEELVGN*SKGHSCYAKRLVTF Trigger: AAATGTCACCAGTCTCTTTGCATAGCAAGAGTGACCTTTACTCCAGTTCCCAACAAGTTCCTCATCTCCATCTGAGACCACCTCAGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CCA 90 bp | TGTCATTCCAGTCAAAGACTTGATAAAATATCCAACGTCTCCAATTaGGTTCCCAGACAACGACGCCGCTTCACCATGATGATGGACAAC | + |
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Preference number: 5 (lower is better) Translates to: CHSSQRLDKISNVSN*VPRQRRRFTMMMDN Trigger: GTTGTCCATCATCATGGTGAAGCGGCGTCGTTGTCTGGGAACCCAATTGGAGACGTTGGATATTTTATCAAGTCTTTGACTGGAATGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577004.2 ENST00000668623.1 |
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| CDS CCA 90 bp | ACCAAAATGTTGATAGTGATATGCACAATAAAGTCCAGGCTGAGGTaGTCTCAGATGGAGATGAGGAACTTGTTGGGAACTGGAGTAAAG | + |
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Preference number: 5 (lower is better) Translates to: TKMLIVICTIKSRLR*SQMEMRNLLGTGVK Trigger: CTTTACTCCAGTTCCCAACAAGTTCCTCATCTCCATCTGAGACCACCTCAGCCTGGACTTTATTGTGCATATCACTATCAACATTTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS TCA 90 bp | CCATATTATATGGTGAATACTGTCAAAAGATTCAAAATCATTATGTaGTGGGCCTGGCCAAGACAATGGTATGCATCAGGGATCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: PYYMVNTVKRFKIIM*WAWPRQWYASGIWK Trigger: CTTCCAGATCCCTGATGCATACCATTGTCTTGGCCAGGCCCATCACATAATGATTTTGAATCTTTTGACAGTATTCACCATATAATATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS TCA 90 bp | TCTCAGATGAGACTTTGGACTTGGACTTTTGGGTTAATGTTGAAATaGGTTAAGACATTGGAGGACTGTTGGGAAGGCATGATTGTATTT | + |
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Preference number: 5 (lower is better) Translates to: SQMRLWTWTFGLMLK*VKTLEDCWEGMIVF Trigger: AAATACAATCATGCCTTCCCAACAGTCCTCCAATGTCTTAACTCATTTCAACATTAACCCAAAAGTCCAAGTCCAAAGTCTCATCTGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS GCA 72 bp | GGACGGAGGGGCTCCTTACTTCTCAGAGGGGGCGGCTaGCGGGCAGAGGGTCTCCTCCCTTCTCAGACGGGG | + |
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Preference number: 6 (lower is better) Translates to: GRRGSLLLRGGG*RAEGLLPSQTG Trigger: CCCCGTCTGAGAAGGGAGGAGACCCTCTGCCCGGCAGCCGCCCCCTCTGAGAAGTAAGGAGCCCCTCCGTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668623.1 |
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| CDS CAA 90 bp | CCTGGGCTGGGTCCAGGGCCCGCCTGCTGTGTGCAGCCTTTAGACTaGGTGCCCTGCATCCCAGCTGCTCCAGCCATGGCTAAAAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PGLGPGPACCVQPLD*VPCIPAAPAMAKRA Trigger: GGCCCTTTTAGCCATGGCTGGAGCAGCTGGGATGCAGGGCACCAAGTCTAAAGGCTGCACACAGCAGGCGGGCCCTGGACCCAGCCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CCA 72 bp | CCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGTaGCCAGGCAGAGACGCTCCTCACTTCCCAGACAGG | + |
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Preference number: 6 (lower is better) Translates to: PGRGAPHIPDDG*PGRDAPHFPDR Trigger: CCTGTCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCACCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663150.1 ENST00000668623.1 |
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| CDS CCA 72 bp | AGAGACGCTCCTCACTTCCCAGACAGGGTGGCGGCCTaGCAGAGGCTGCAATCTCGGCTCTTTGGGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: RDAPHFPDRVAA*QRLQSRLFGRP Trigger: TGGCCTCCCAAAGAGCCGAGATTGCAGCCTCTGCCAGGCCGCCACCCTGTCTGGGAAGTGAGGAGCGTCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663150.1 ENST00000668623.1 |
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| CDS TCA 72 bp | CACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTaGACGAGACTCGGTCTGCAATCCCGGCACCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: HCTPAWAPLSTE*TRLGLQSRHLG Trigger: CCCGAGGTGCCGGGATTGCAGACCGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663150.1 ENST00000668623.1 |
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| CDS CCA 72 bp | GCAATCTCGGCTCTTTGGGAGGCCAAGGCAGGCAGCTaGGAGGTGGTTGTAGCGAGCCCAGATCACGCCACT | + |
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Preference number: 6 (lower is better) Translates to: AISALWEAKAGS*EVVVASPDHAT Trigger: AGTGGCGTGATCTGGGCTCGCTACAACCACCTCCCAGCTGCCTGCCTTGGCCTCCCAAAGAGCCGAGATTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663150.1 ENST00000668623.1 |
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| CDS TCA 72 bp | AGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTaGGCGGAGATGGCAGCAGTACAGTCCAGCTTCGGC | + |
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Preference number: 6 (lower is better) Translates to: RLRQENQAGRLQ*AEMAAVQSSFG Trigger: GCCGAAGCTGGACTGTACTGCTGCCATCTCCGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663150.1 ENST00000668623.1 |
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| CDS TCA 72 bp | GCGCACGCCTGCAATTTTCGCAGGCACTTGGCAGGCTaGGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: AHACNFRRHLAG*GRRIRQGGCSE Trigger: CTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCAAGTGCCTGCGAAAATTGCAGGCGTGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663150.1 ENST00000668623.1 |
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| CDS GCA 72 bp | CCTCACTTCCTAGATGGGATGGCGGCCGGGAAGAGATaGTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: PHFLDGMAAGKR*SSLSRLGSQAE Trigger: CTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCATCTCTTCCCGGCCGCCATCCCATCTAGGAAGTGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663150.1 ENST00000668623.1 |
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| CDS GCA 72 bp | CAGCCCGCGAAAGCAGCTGGGAGGGGAGCTGTGCCCTaGAAAGTCACAAGGATGGAGCTACCCAAGACCATG | + |
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Preference number: 6 (lower is better) Translates to: QPAKAAGRGAVP*KVTRMELPKTM Trigger: CATGGTCTTGGGTAGCTCCATCCTTGTGACTTTGCAGGGCACAGCTCCCCTCCCAGCTGCTTTCGCGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS GCA 72 bp | GGAAAATGGTTTCCTGGGCTGGGTCCAGGGCCCGCCTaGTGTGTGCAGCCTTTAGACTTGGTGCCCTGCATC | + |
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Preference number: 6 (lower is better) Translates to: GKWFPGLGPGPA*CVQPLDLVPCI Trigger: GATGCAGGGCACCAAGTCTAAAGGCTGCACACAGCAGGCGGGCCCTGGACCCAGCCCAGGAAACCATTTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS GCA 72 bp | TTGCACCATGAACCTGGAAAAGCCACAGCCACTCAATaGCAGCCCGCGAAAGCAGCTGGGAGGGGAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LHHEPGKATATQ*QPAKAAGRGAV Trigger: CACAGCTCCCCTCCCAGCTGCTTTCGCGGGCTGGCATTGAGTGGCTGTGGCTTTTCCAGGTTCATGGTGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CCA 72 bp | CTGGGAGGGGAGCTGTGCCCTGCAAAGTCACAAGGATaGAGCTACCCAAGACCATGGGAACCCACCTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: LGGELCPAKSQG*SYPRPWEPTSC Trigger: GCAAGAGGTGGGTTCCCATGGTCTTGGGTAGCTCCATCCTTGTGACTTTGCAGGGCACAGCTCCCCTCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CAA 90 bp | GGGCCACTGTCCTCCAGACCCCAGAATGGTCGATCCACTGACAGTTaGCACCATGAACCTGGAAAAGCCACAGCCACTCAATGCCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: GPLSSRPQNGRSTDS*HHEPGKATATQCQP Trigger: GGGCTGGCATTGAGTGGCTGTGGCTTTTCCAGGTTCATGGTGCAAACTGTCAGTGGATCGACCATTCTGGGGTCTGGAGGACAGTGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CAA 90 bp | GGGAGACAGCCCTCAGCAGACACAAGACCTGTTGACGCCTTAATCTaGGACTTCCCAGCCTTCAGAACCCAGACAACGACGCCGCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: GRQPSADTRPVDALI*DFPAFRTQTTTPLH Trigger: GTGAAGCGGCGTCGTTGTCTGGGTTCTGAAGGCTGGGAAGTCCAAGATTAAGGCGTCAACAGGTCTTGTGTCTGCTGAGGGCTGTCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658532.1 ENST00000663150.1 ENST00000669934.1 |
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| CDS GCA 72 bp | GGAGACTGGAGGCCTCTGGCTCAGTCTCTCAAAAGCTaGCATCAAGTCACAGGCCAGGGTCATCTCAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: GDWRPLAQSLKS*HQVTGQGHLKA Trigger: AGCCTTGAGATGACCCTGGCCTGTGACTTGATGGCAGCTTTTGAGAGACTGAGCCAGAGGCCTCCAGTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663150.1 ENST00000668623.1 |
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| CDS CCA 72 bp | AGGGCCAGGGCCACTGTGACCTGTGGTAACAATGGATaGGCACAGTTACTGGGACCTGGAGCACAGAACATG | + |
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Preference number: 6 (lower is better) Translates to: RARATVTCGNNG*AQLLGPGAQNM Trigger: CATGTTCTGTGCTCCAGGTCCCAGTAACTGTGCCCATCCATTGTTACCACAGGTCACAGTGGCCCTGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000577004.2 ENST00000658532.1 ENST00000669934.1 |
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| CDS CCA 72 bp | TCCAGACAGAGGTGTGCTGCAGGGGCAGAGCCTTCATaGAGAACCTCTGCTAGGGCAGTGTGGAAGGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: SRQRCAAGAEPS*RTSARAVWKGN Trigger: ATTTCCCTTCCACACTGCCCTAGCAGAGGTTCTCCATGAAGGCTCTGCCCCTGCAGCACACCTCTGTCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS GCA 72 bp | CTTACCTGGAGGCCTCTGGCTCAGTCTCTCAAAAGCTaGCATCAAGTCACAGGCCAGGGTCATCTCAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LTWRPLAQSLKS*HQVTGQGHLKA Trigger: AGCCTTGAGATGACCCTGGCCTGTGACTTGATGGCAGCTTTTGAGAGACTGAGCCAGAGGCCTCCAGGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000577004.2 ENST00000658532.1 ENST00000669934.1 |
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| CDS CCA 72 bp | AAATGTGGGGTGGAAGCCCCTATACAGAGTCTCCATTaGGCACTGCCTAGTGGAGCTGTGAGAAGAGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: KCGVEAPIQSLH*ALPSGAVRRGP Trigger: TGGCCCTCTTCTCACAGCTCCACTAGGCAGTGCCCAATGGAGACTCTGTATAGGGGCTTCCACCCCACATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS TCA 72 bp | AAGAGAGAGTATAATGCCCCAGGGCCAGGGCCACTGTaGCCTGTGGTAACAATGGATGGGCACAGTTACTGG | + |
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Preference number: 6 (lower is better) Translates to: KREYNAPGPGPL*PVVTMDGHSYW Trigger: CCAGTAACTGTGCCCATCCATTGTTACCACAGGTCACAGTGGCCCTGGCCCTGGGGCATTATACTCTCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000577004.2 ENST00000658532.1 ENST00000669934.1 |
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| CDS CAA 72 bp | CCCTCAGCAGACACAAGACCTGTTGACGCCTTAATCTaGGACTTCCCAGCCTTCAGAACCCAGACAACGACG | + |
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Preference number: 6 (lower is better) Translates to: PSADTRPVDALI*DFPAFRTQTTT Trigger: CGTCGTTGTCTGGGTTCTGAAGGCTGGGAAGTCCAAGATTAAGGCGTCAACAGGTCTTGTGTCTGCTGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658532.1 ENST00000663150.1 ENST00000669934.1 |
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| CDS GCA 72 bp | CCTCCAGACCCCAGAATGGTCGATCCACTGACAGTTTaGACCATGAACCTGGAAAAGCCACAGCCACTCAAT | + |
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Preference number: 6 (lower is better) Translates to: PPDPRMVDPLTV*TMNLEKPQPLN Trigger: ATTGAGTGGCTGTGGCTTTTCCAGGTTCATGGTGCAAACTGTCAGTGGATCGACCATTCTGGGGTCTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CCA 72 bp | GTTCAGGAATCTGAGAAGGGCTTACCTGGAGGCCTCTaGCTCAGTCTCTCAAAAGCTGCCATCAAGTCACAG | + |
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Preference number: 6 (lower is better) Translates to: VQESEKGLPGGL*LSLSKAAIKSQ Trigger: CTGTGACTTGATGGCAGCTTTTGAGAGACTGAGCCAGAGGCCTCCAGGTAAGCCCTTCTCAGATTCCTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000577004.2 ENST00000658532.1 ENST00000669934.1 |
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| CDS CAA 72 bp | TCCTCCAGACCCCAGAATGGTCGATCCACTGACAGTTaGCACCATGAACCTGGAAAAGCCACAGCCACTCAA | + |
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Preference number: 6 (lower is better) Translates to: SSRPQNGRSTDS*HHEPGKATATQ Trigger: TTGAGTGGCTGTGGCTTTTCCAGGTTCATGGTGCAAACTGTCAGTGGATCGACCATTCTGGGGTCTGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS TCA 72 bp | CCCATGTGTCATGGGAGGGATTCAGTGGGAAGTAATTaGATCATGCGGGCGGGTTTTTCCCATGCTGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: PMCHGRDSVGSN*IMRAGFSHAVL Trigger: GAGAACAGCATGGGAAAAACCCGCCCGCATGATTCAATTACTTCCCACTGAATCCCTCCCATGACACATGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CAA 90 bp | GACAATGGTATGCATCAGGGATCTGGAAGAACCAGCACATTCAAATaGGGCAGGCTGAGACCAGCTTACAAAGGTCTGGGTAGGATGCAG | + |
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Preference number: 6 (lower is better) Translates to: DNGMHQGSGRTSTFK*GRLRPAYKGLGRMQ Trigger: CTGCATCCTACCCAGACCTTTGTAAGCTGGTCTCAGCCTGCCCAATTTGAATGTGCTGGTTCTTCCAGATCCCTGATGCATACCATTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CAA 72 bp | TCCAGGCTGAGGTGGTCTCAGATGGAGATGAGGAACTaGTTGGGAACTGGAGTAAAGGTCACTCTTGCTATG | + |
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Preference number: 6 (lower is better) Translates to: SRLRWSQMEMRN*LGTGVKVTLAM Trigger: CATAGCAAGAGTGACCTTTACTCCAGTTCCCAACAAGTTCCTCATCTCCATCTGAGACCACCTCAGCCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CAA 72 bp | ATGCATCAGGGATCTGGAAGAACCAGCACATTCAAATaGGGCAGGCTGAGACCAGCTTACAAAGGTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: MHQGSGRTSTFK*GRLRPAYKGLG Trigger: ACCCAGACCTTTGTAAGCTGGTCTCAGCCTGCCCAATTTGAATGTGCTGGTTCTTCCAGATCCCTGATGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS TCA 72 bp | ACCCAAGACCATGGGAACCCACCTCTTGCATCAATGTaGCCTGGATGTGAGACATGGAGTCAAAAGAGATCA | + |
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Preference number: 6 (lower is better) Translates to: TQDHGNPPLASM*PGCETWSQKRS Trigger: TGATCTCTTTTGACTCCATGTCTCACATCCAGGTCACATTGATGCAAGAGGTGGGTTCCCATGGTCTTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS GCA 72 bp | GAGGAACTTGTTGGGAACTGGAGTAAAGGTCACTCTTaGTATGCAAAGAGACTGGTGACATTTTGCCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: EELVGNWSKGHS*YAKRLVTFCPC Trigger: GCAGGGGCAAAATGTCACCAGTCTCTTTGCATAGCAAGAGTGACCTTTACTCCAGTTCCCAACAAGTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CAA 72 bp | GCCTTCAGAACACAGGTCAGGAGCTTTGTAAAGGAATaGCATGCAGAGGGTACCATGCCAGTTTTTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: AFRTQVRSFVKE*HAEGTMPVFPR Trigger: CCTTGGAAAAACTGGCATGGTACCCTCTGCATGCAATTCCTTTACAAAGCTCCTGACCTGTGTTCTGAAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000577004.2 ENST00000668623.1 |
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| CDS CAA 72 bp | CACACATGTGGTTGCTGGTATTTGGAAATGGAGTCCTaGGAGGTTATAGGTTTAGGCGAGGTCATGAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: HTCGCWYLEMES*EVIGLGEVMRV Trigger: CACCCTCATGACCTCGCCTAAACCTATAACCTCCAAGGACTCCATTTCCAAATACCAGCAACCACATGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000577004.2 ENST00000658532.1 ENST00000663150.1 ENST00000668623.1 ENST00000669934.1 |
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| CDS CAA 72 bp | AGGCTGAGGTGGTCTCAGATGGAGATGAGGAACTTGTaGGGAACTGGAGTAAAGGTCACTCTTGCTATGCAA | + |
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Preference number: 6 (lower is better) Translates to: RLRWSQMEMRNL*GTGVKVTLAMQ Trigger: TTGCATAGCAAGAGTGACCTTTACTCCAGTTCCCAACAAGTTCCTCATCTCCATCTGAGACCACCTCAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CAA 90 bp | AAAGTCACAAGGATGGAGCTACCCAAGACCATGGGAACCCACCTCTaGCATCAATGTGACCTGGATGTGAGACATGGAGTCAAAAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: KVTRMELPKTMGTHL*HQCDLDVRHGVKRD Trigger: ATCTCTTTTGACTCCATGTCTCACATCCAGGTCACATTGATGCAAGAGGTGGGTTCCCATGGTCTTGGGTAGCTCCATCCTTGTGACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CAA 90 bp | CCACCTTTAGAGAGTGATCTAGAAGATCAAGCCCACACATTGAGTTaGGCAGAGAAGAAAGAGGGCCTTAGCCTTACTGAACTGCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: PPLESDLEDQAHTLS*AEKKEGLSLTELLD Trigger: GTCCAGCAGTTCAGTAAGGCTAAGGCCCTCTTTCTTCTCTGCCAAACTCAATGTGTGGGCTTGATCTTCTAGATCACTCTCTAAAGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CAA 90 bp | ACAATAAAGTCCAGGCTGAGGTGGTCTCAGATGGAGATGAGGAACTaGTTGGGAACTGGAGTAAAGGTCACTCTTGCTATGCAAAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: TIKSRLRWSQMEMRN*LGTGVKVTLAMQRD Trigger: GTCTCTTTGCATAGCAAGAGTGACCTTTACTCCAGTTCCCAACAAGTTCCTCATCTCCATCTGAGACCACCTCAGCCTGGACTTTATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS GCA 72 bp | TATAAAGGGCAATTCCCCTGCACATGCTCTCTGTCTTaGCACCATGTAAGATGTGCCTTTGATCCTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: YKGQFPCTCSLS*HHVRCAFDPPS Trigger: TGAAGGAGGATCAAAGGCACATCTTACATGGTGGCAAGACAGAGAGCATGTGCAGGGGAATTGCCCTTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS GCA 72 bp | GGTCACTCTTGCTATGCAAAGAGACTGGTGACATTTTaGCCCTGCCCTAGAGATCTGTGGAACTTTGAACTT | + |
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Preference number: 6 (lower is better) Translates to: GHSCYAKRLVTF*PCPRDLWNFEL Trigger: AAGTTCAAAGTTCCACAGATCTCTAGGGCAGGGGCAAAATGTCACCAGTCTCTTTGCATAGCAAGAGTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CCA 72 bp | GTGGTCTCAGATGGAGATGAGGAACTTGTTGGGAACTaGAGTAAAGGTCACTCTTGCTATGCAAAGAGACTG | + |
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Preference number: 6 (lower is better) Translates to: VVSDGDEELVGN*SKGHSCYAKRL Trigger: CAGTCTCTTTGCATAGCAAGAGTGACCTTTACTCCAGTTCCCAACAAGTTCCTCATCTCCATCTGAGACCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CCA 72 bp | ATTGGATGGTTTTATAAAGGGCAGTTCCCCTACACATaGTCTCTTGCCTGCCGCCGTGTAAGACATACCTTT | + |
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Preference number: 6 (lower is better) Translates to: IGWFYKGQFPYT*SLACRRVRHTF Trigger: AAAGGTATGTCTTACACGGCGGCAGGCAAGAGACCATGTGTAGGGGAACTGCCCTTTATAAAACCATCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CAA 72 bp | CTGGGGAAGGATCCTCTTCTAAGCTCACACATGTGGTaGCTGGTATTTGGAAATGGAGTCCTTGGAGGTTAT | + |
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Preference number: 6 (lower is better) Translates to: LGKDPLLSSHMW*LVFGNGVLGGY Trigger: ATAACCTCCAAGGACTCCATTTCCAAATACCAGCAACCACATGTGTGAGCTTAGAAGAGGATCCTTCCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000577004.2 ENST00000658532.1 ENST00000663150.1 ENST00000668623.1 ENST00000669934.1 |
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| CDS GCA 72 bp | ATATGGTTCGGCTGTGTCCTCACCCAAATCTTATCTTaGATTGTAGCTCTCATAATCCCTGTGTGTCATGGG | + |
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Preference number: 6 (lower is better) Translates to: IWFGCVLTQILS*IVALIIPVCHG Trigger: CCCATGACACACAGGGATTATGAGAGCTACAATGCAAGATAAGATTTGGGTGAGGACACAGCCGAACCATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CAA 72 bp | GAGAGTGATCTAGAAGATCAAGCCCACACATTGAGTTaGGCAGAGAAGAAAGAGGGCCTTAGCCTTACTGAA | + |
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Preference number: 6 (lower is better) Translates to: ESDLEDQAHTLS*AEKKEGLSLTE Trigger: TTCAGTAAGGCTAAGGCCCTCTTTCTTCTCTGCCAAACTCAATGTGTGGGCTTGATCTTCTAGATCACTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS GCA 72 bp | AATCATTATGTGATGGGCCTGGCCAAGACAATGGTATaGATCAGGGATCTGGAAGAACCAGCACATTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: NHYVMGLAKTMV*IRDLEEPAHSN Trigger: ATTTGAATGTGCTGGTTCTTCCAGATCCCTGATGCATACCATTGTCTTGGCCAGGCCCATCACATAATGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CCA 72 bp | TTGATAGTGATATGCACAATAAAGTCCAGGCTGAGGTaGTCTCAGATGGAGATGAGGAACTTGTTGGGAACT | + |
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Preference number: 6 (lower is better) Translates to: LIVICTIKSRLR*SQMEMRNLLGT Trigger: AGTTCCCAACAAGTTCCTCATCTCCATCTGAGACCACCTCAGCCTGGACTTTATTGTGCATATCACTATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CAA 72 bp | TTGATTTTACAGACTCATAGGCGAAAGGGACTTGCCTaGTCTCAGATGAGACTTTGGACTTGGACTTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LILQTHRRKGLA*SQMRLWTWTFG Trigger: CCCAAAAGTCCAAGTCCAAAGTCTCATCTGAGACAAGGCAAGTCCCTTTCGCCTATGAGTCTGTAAAATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CAA 72 bp | GCCTGGAGCCCCTTTGTTTTGGCCAATTTCTCTTATTaGGAATGGGAATATTTATTCAATGCCTGTACCCCC | + |
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Preference number: 6 (lower is better) Translates to: AWSPFVLANFSY*EWEYLFNACTP Trigger: GGGGGTACAGGCATTGAATAAATATTCCCATTCCAAATAAGAGAAATTGGCCAAAACAAAGGGGCTCCAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS GCA 72 bp | GTGCATAGCAGTCAAGAATTGAAGTTTGGAAACCTCTaGCTAGATTTCAGAGGATGTATGGAAATGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: VHSSQELKFGNL*LDFRGCMEMPG Trigger: TCCAGGCATTTCCATACATCCTCTGAAATCTAGGCAGAGGTTTCCAAACTTCAATTCTTGACTGCTATGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS TCA 72 bp | GCTGTTCTCATGATAGTGAATAAGTCTCATGAGATCTaGTGGTTTTATAAAGGGCAATTCCCCTGCACATGC | + |
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Preference number: 6 (lower is better) Translates to: AVLMIVNKSHEI*WFYKGQFPCTC Trigger: GCATGTGCAGGGGAATTGCCCTTTATAAAACCATCAGATCTCATGAGACTTATTCACTATCATGAGAACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS TCA 72 bp | AGACTTTGGACTTGGACTTTTGGGTTAATGTTGAAATaGGTTAAGACATTGGAGGACTGTTGGGAAGGCATG | + |
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Preference number: 6 (lower is better) Translates to: RLWTWTFGLMLK*VKTLEDCWEGM Trigger: CATGCCTTCCCAACAGTCCTCCAATGTCTTAACTCATTTCAACATTAACCCAAAAGTCCAAGTCCAAAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS CCA 72 bp | AGACTGGTGACATTTTGCCCCTGCCCTAGAGATCTGTaGAACTTTGAACTTGAGAGAGATGATTTAAAGTAT | + |
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Preference number: 6 (lower is better) Translates to: RLVTFCPCPRDL*NFELERDDLKY Trigger: ATACTTTAAATCATCTCTCTCAAGTTCAAAGTTCCACAGATCTCTAGGGCAGGGGCAAAATGTCACCAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS TCA 72 bp | TCTCTCTCTCTCTTTCCTTTGAGAAGTAAATTTTGCTaGTTTTCACCTGAGAGTTGTTCCTTCGGTATACAA | + |
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Preference number: 6 (lower is better) Translates to: SLSLFPLRSKFC*FSPESCSFGIQ Trigger: TTGTATACCGAAGGAACAACTCTCAGGTGAAAATCAGCAAAATTTACTTCTCAAAGGAAAGAGAGAGAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS TCA 72 bp | AAAATGTGGGAAAGTTTGGAACTTCCTAGAGACTGTTaGATGGCTTTGACCAAAATGTTGATAGTGATATGC | + |
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Preference number: 6 (lower is better) Translates to: KMWESLELPRDC*MALTKMLIVIC Trigger: GCATATCACTATCAACATTTTGGTCAAAGCCATTCAACAGTCTCTAGGAAGTTCCAAACTTTCCCACATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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| CDS GCA 72 bp | TTTTCTGAGGATAAATTCAAGCCAGCTGCAGAAATTTaGATAAGTAACAAGGAGCCAAATGCTAATCACCAA | + |
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Preference number: 6 (lower is better) Translates to: FSEDKFKPAAEI*ISNKEPNANHQ Trigger: TTGGTGATTAGCATTTGGCTCCTTGTTACTTATGCAAATTTCTGCAGCTGGCTTGAATTTATCCTCAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669934.1 |
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