Pregenerated sensors for LINC00616 (Homo sapiens)
Ensembl gene IDs: ENSG00000248307Ensembl transcript IDs: ENST00000503208.1, ENST00000505874.2, ENST00000512536.6, ENST00000513895.1, ENST00000514600.5, ENST00000653614.1, ENST00000653774.1, ENST00000654116.1, ENST00000654802.1, ENST00000655762.1, ENST00000656520.1, ENST00000656980.1, ENST00000658598.1, ENST00000658661.1, ENST00000659104.1, ENST00000659677.1, ENST00000660118.1, ENST00000660320.1, ENST00000660519.1, ENST00000660556.1, ENST00000661081.1, ENST00000661479.1, ENST00000661963.1, ENST00000662849.1, ENST00000663598.1, ENST00000663909.1, ENST00000664696.1, ENST00000665179.1, ENST00000665542.1, ENST00000665774.1, ENST00000666002.1, ENST00000666325.1, ENST00000666423.1, ENST00000666434.1, ENST00000666712.1, ENST00000667051.1, ENST00000667784.1, ENST00000668210.1, ENST00000668713.1, ENST00000668859.1, ENST00000670649.1, ENST00000670981.1, ENST00000671369.1
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCTAGGAGTTGGCCTAGTAGTCACAGTCTACAAGGGTGCTGGCTCTaGCCCTCAACGAGGGACTGTCCATCTTGGGCCTCATTATTCAGT | + |
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Preference number: 5 (lower is better) Translates to: SRSWPSSHSLQGCWL*PSTRDCPSWASLFS Trigger: ACTGAATAATGAGGCCCAAGATGGACAGTCCCTCGTTGAGGGTCAGAGCCAGCACCCTTGTAGACTGTGACTACTAGGCCAACTCCTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000654116.1 ENST00000655762.1 ENST00000658661.1 ENST00000659104.1 ENST00000663909.1 ENST00000666434.1 ENST00000670981.1 |
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| CDS GCA 90 bp | GGATTCCTTAATGAAGCCAGGCACACCGAGAGAGGACAGGACACGTaGTTCAAACTGGAGCGTGTGAGATGCAGGCTAAAGCTATATCCT | + |
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Preference number: 5 (lower is better) Translates to: GFLNEARHTERGQDT*FKLERVRCRLKLYP Trigger: AGGATATAGCTTTAGCCTGCATCTCACACGCTCCAGTTTGAAGCACGTGTCCTGTCCTCTCTCGGTGTGCCTGGCTTCATTAAGGAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513895.1 |
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| CDS GCA 90 bp | CAATCACTGCAGATTCCTGGCCACAGCAAAGAGGAAGCTTGGGTTTaGATGTCCAGGACCTCCACCCTAAGTATTCAGGCACTCTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: QSLQIPGHSKEEAWV*MSRTSTLSIQALFL Trigger: CAAAAAGAGTGCCTGAATACTTAGGGTGGAGGTCCTGGACATGCAAACCCAAGCTTCCTCTTTGCTGTGGCCAGGAATCTGCAGTGATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000503208.1 ENST00000514600.5 ENST00000654802.1 ENST00000656520.1 ENST00000659677.1 ENST00000660118.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000663598.1 ENST00000665179.1 ENST00000665542.1 ENST00000668713.1 ENST00000668859.1 |
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| CDS CCA 90 bp | ACTTTCCAACTATTACTGAGGGGTCATTGCTGCTTTCCTGAAACCTaGTGGCCCCTGTCTATAACCTGTGAAATGGTGGTAGAGCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: TFQLLLRGHCCFPET*WPLSITCEMVVELH Trigger: GTGGAGCTCTACCACCATTTCACAGGTTATAGACAGGGGCCACCAGGTTTCAGGAAAGCAGCAATGACCCCTCAGTAATAGTTGGAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 35 transcripts: ENST00000505874.2 ENST00000512536.6 ENST00000513895.1 ENST00000514600.5 ENST00000653614.1 ENST00000654116.1 ENST00000656520.1 ENST00000656980.1 ENST00000658598.1 ENST00000658661.1 ENST00000659104.1 ENST00000659677.1 ENST00000660118.1 ENST00000660320.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000661479.1 ENST00000661963.1 ENST00000662849.1 ENST00000663598.1 ENST00000663909.1 ENST00000664696.1 ENST00000665774.1 ENST00000666002.1 ENST00000666325.1 ENST00000666423.1 ENST00000666434.1 ENST00000666712.1 ENST00000667051.1 ENST00000668210.1 ENST00000668713.1 ENST00000668859.1 ENST00000670649.1 ENST00000670981.1 |
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| CDS CCA 90 bp | TATCCCATTGGTAACCCAGAAAGGTGTATTGTGCTTCTTCAGAGGTaGAGGCAAACTGCAGCTCTTCTTCACCAACACAGTGAAGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: YPIGNPERCIVLLQR*RQTAALLHQHSEAQ Trigger: CTGAGCTTCACTGTGTTGGTGAAGAAGAGCTGCAGTTTGCCTCCACCTCTGAAGAAGCACAATACACCTTTCTGGGTTACCAATGGGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000512536.6 ENST00000513895.1 ENST00000653614.1 ENST00000655762.1 ENST00000659104.1 ENST00000659677.1 ENST00000660320.1 ENST00000660519.1 ENST00000661479.1 ENST00000661963.1 ENST00000664696.1 ENST00000666002.1 ENST00000666712.1 ENST00000668210.1 ENST00000668859.1 |
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| CDS CCA 90 bp | GTTTTCTCTCTTCACAATTGCGTTGTTGCTTTAGCCAGAACGCTGTaGCATTTTACCAGCCTTTCCCTTTATCAGGGAGGCACCTCACGA | + |
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Preference number: 5 (lower is better) Translates to: VFSLHNCVVALARTL*HFTSLSLYQGGTSR Trigger: TCGTGAGGTGCCTCCCTGATAAAGGGAAAGGCTGGTAAAATGCCACAGCGTTCTGGCTAAAGCAACAACGCAATTGTGAAGAGAGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000660320.1 ENST00000665774.1 ENST00000666423.1 |
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| CDS TCA 90 bp | GACCCTCAACGAGGGACTGTCCATCTTGGGCCTCATTATTCAGTTTaGAGTTATTGCCTGTCCTGTCCAACACAAGCTTCAGATGATTCT | + |
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Preference number: 5 (lower is better) Translates to: DPQRGTVHLGPHYSV*SYCLSCPTQASDDS Trigger: AGAATCATCTGAAGCTTGTGTTGGACAGGACAGGCAATAACTTCAAACTGAATAATGAGGCCCAAGATGGACAGTCCCTCGTTGAGGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000654116.1 ENST00000655762.1 ENST00000658661.1 ENST00000659104.1 ENST00000663909.1 ENST00000666434.1 ENST00000670981.1 |
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| CDS GCA 90 bp | AGCTCAGTGTCATATCACACTTTCCAACTATTACTGAGGGGTCATTaGTGCTTTCCTGAAACCTGGTGGCCCCTGTCTATAACCTGTGAA | + |
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Preference number: 5 (lower is better) Translates to: SSVSYHTFQLLLRGH*CFPETWWPLSITCE Trigger: TTCACAGGTTATAGACAGGGGCCACCAGGTTTCAGGAAAGCAGCAATGACCCCTCAGTAATAGTTGGAAAGTGTGATATGACACTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 35 transcripts: ENST00000505874.2 ENST00000512536.6 ENST00000513895.1 ENST00000514600.5 ENST00000653614.1 ENST00000654116.1 ENST00000656520.1 ENST00000656980.1 ENST00000658598.1 ENST00000658661.1 ENST00000659104.1 ENST00000659677.1 ENST00000660118.1 ENST00000660320.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000661479.1 ENST00000661963.1 ENST00000662849.1 ENST00000663598.1 ENST00000663909.1 ENST00000664696.1 ENST00000665774.1 ENST00000666002.1 ENST00000666325.1 ENST00000666423.1 ENST00000666434.1 ENST00000666712.1 ENST00000667051.1 ENST00000668210.1 ENST00000668713.1 ENST00000668859.1 ENST00000670649.1 ENST00000670981.1 |
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| CDS CCA 90 bp | TATCCCATTGGTAACCCAGAAAGGTGTATTGTGCTTCTTCAGAGGTaGAGGCAAACTGCAGCTGCCACAAGGAGCAACACACATTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: YPIGNPERCIVLLQR*RQTAAATRSNTHSN Trigger: ATTTGAATGTGTGTTGCTCCTTGTGGCAGCTGCAGTTTGCCTCCACCTCTGAAGAAGCACAATACACCTTTCTGGGTTACCAATGGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665542.1 |
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| CDS GCA 90 bp | TCTTGCTGGGACATGTGGATGAATGCAGTTTTCTCTCTTCACAATTaGGTTGTTGCTTTAGCCAGAACGCTGTGGCATTTTACCAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: SCWDMWMNAVFSLHN*VVALARTLWHFTSL Trigger: AAGGCTGGTAAAATGCCACAGCGTTCTGGCTAAAGCAACAACGCAATTGTGAAGAGAGAAAACTGCATTCATCCACATGTCCCAGCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000660320.1 ENST00000665774.1 ENST00000666423.1 ENST00000671369.1 |
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| CDS GCA 90 bp | AGGTGCGTTTTTATAATGACACTCTATCAAGCCACTGAGATCAACTaGCAGAGCTCAATCTGCTACAGGAATCTTGATATCCTAGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: RCVFIMTLYQATEIN*QSSICYRNLDILGG Trigger: ACCCCCTAGGATATCAAGATTCCTGTAGCAGATTGAGCTCTGGCAGTTGATCTCAGTGGCTTGATAGAGTGTCATTATAAAAACGCACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 31 transcripts: ENST00000653774.1 ENST00000654116.1 ENST00000656520.1 ENST00000656980.1 ENST00000658598.1 ENST00000659104.1 ENST00000659677.1 ENST00000660118.1 ENST00000660320.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000661479.1 ENST00000661963.1 ENST00000662849.1 ENST00000663909.1 ENST00000664696.1 ENST00000665179.1 ENST00000665542.1 ENST00000665774.1 ENST00000666002.1 ENST00000666325.1 ENST00000666434.1 ENST00000666712.1 ENST00000667051.1 ENST00000667784.1 ENST00000668210.1 ENST00000668713.1 ENST00000668859.1 ENST00000670649.1 ENST00000671369.1 |
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| CDS GCA 90 bp | GGACATGTGGATGAATGCAGTTTTCTCTCTTCACAATTGCGTTGTTaGTTTAGCCAGAACGCTGTGGCATTTTACCAGCCTTTCCCTTTA | + |
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Preference number: 5 (lower is better) Translates to: GHVDECSFLSSQLRC*FSQNAVAFYQPFPL Trigger: TAAAGGGAAAGGCTGGTAAAATGCCACAGCGTTCTGGCTAAAGCAACAACGCAATTGTGAAGAGAGAAAACTGCATTCATCCACATGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000660320.1 ENST00000665774.1 ENST00000666423.1 |
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| CDS GCA 90 bp | GATGTAACTGCTCAACTGCTTCACAATGCCTTTGGTGATAGCTCTTaGTGGGACATGTGGATGAATGCAGTTTTCTCTCTTCACAATTGC | + |
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Preference number: 5 (lower is better) Translates to: DVTAQLLHNAFGDSS*WDMWMNAVFSLHNC Trigger: GCAATTGTGAAGAGAGAAAACTGCATTCATCCACATGTCCCAGCAAGAGCTATCACCAAAGGCATTGTGAAGCAGTTGAGCAGTTACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000660320.1 ENST00000665774.1 ENST00000666423.1 ENST00000671369.1 |
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| CDS CCA 90 bp | TATCCCATTGGTAACCCAGAAAGGTGTATTGTGCTTCTTCAGAGGTaGAGGCAAACTGCAGCTTTTATTTTCCTCACCTCTTCTTCACCA | + |
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Preference number: 5 (lower is better) Translates to: YPIGNPERCIVLLQR*RQTAAFIFLTSSSP Trigger: TGGTGAAGAAGAGGTGAGGAAAATAAAAGCTGCAGTTTGCCTCCACCTCTGAAGAAGCACAATACACCTTTCTGGGTTACCAATGGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 21 transcripts: ENST00000505874.2 ENST00000514600.5 ENST00000654116.1 ENST00000656520.1 ENST00000656980.1 ENST00000658598.1 ENST00000658661.1 ENST00000660118.1 ENST00000660556.1 ENST00000661081.1 ENST00000662849.1 ENST00000663598.1 ENST00000663909.1 ENST00000665774.1 ENST00000666325.1 ENST00000666423.1 ENST00000666434.1 ENST00000667051.1 ENST00000668713.1 ENST00000670649.1 ENST00000670981.1 |
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| CDS CCA 90 bp | GTAACTGCTCAACTGCTTCACAATGCCTTTGGTGATAGCTCTTGCTaGGACATGTGGATGAATGCAGTTTTCTCTCTTCACAATTGCGTT | + |
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Preference number: 5 (lower is better) Translates to: VTAQLLHNAFGDSSC*DMWMNAVFSLHNCV Trigger: AACGCAATTGTGAAGAGAGAAAACTGCATTCATCCACATGTCCCAGCAAGAGCTATCACCAAAGGCATTGTGAAGCAGTTGAGCAGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000660320.1 ENST00000665774.1 ENST00000666423.1 ENST00000671369.1 |
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| CDS GCA 90 bp | CCTCACAACACCCTCACATGGAGTACTCATGTCTTAGGGATGATTTaGATGTCTCTGTATTGCTTCCTTAAACTGAACTGTGAGATGCTA | + |
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Preference number: 5 (lower is better) Translates to: PHNTLTWSTHVLGMI*MSLYCFLKLNCEML Trigger: TAGCATCTCACAGTTCAGTTTAAGGAAGCAATACAGAGACATGCAAATCATCCCTAAGACATGAGTACTCCATGTGAGGGTGTTGTGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000654116.1 ENST00000655762.1 ENST00000658661.1 ENST00000659104.1 ENST00000663909.1 ENST00000666434.1 ENST00000670981.1 |
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| CDS CCA 90 bp | GGAATGAGCACTGGTTCTCAGGAACTCACACAGGTCTTTTCTGTTTaGTACAGATGCTCAGATGGGAATATCCAAGGTTTAACCTACAAA | + |
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Preference number: 5 (lower is better) Translates to: GMSTGSQELTQVFSV*YRCSDGNIQGLTYK Trigger: TTTGTAGGTTAAACCTTGGATATTCCCATCTGAGCATCTGTACCAAACAGAAAAGACCTGTGTGAGTTCCTGAGAACCAGTGCTCATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000653774.1 ENST00000656520.1 ENST00000658598.1 ENST00000660519.1 ENST00000661479.1 ENST00000662849.1 ENST00000665179.1 ENST00000665542.1 ENST00000667051.1 ENST00000668210.1 ENST00000668859.1 |
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| CDS CCA 90 bp | TCAGGAACTCACACAGGTCTTTTCTGTTTGGTACAGATGCTCAGATaGGAATATCCAAGGTTTAACCTACAAATTATCAGGGAGGCACCT | + |
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Preference number: 5 (lower is better) Translates to: SGTHTGLFCLVQMLR*EYPRFNLQIIREAP Trigger: AGGTGCCTCCCTGATAATTTGTAGGTTAAACCTTGGATATTCCCATCTGAGCATCTGTACCAAACAGAAAAGACCTGTGTGAGTTCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662849.1 |
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| CDS CCA 90 bp | CAACTGCTTCACAATGCCTTTGGTGATAGCTCTTGCTGGGACATGTaGATGAATGCAGTTTTCTCTCTTCACAATTGCGTTGTTGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: QLLHNAFGDSSCWDM*MNAVFSLHNCVVAL Trigger: TAAAGCAACAACGCAATTGTGAAGAGAGAAAACTGCATTCATCCACATGTCCCAGCAAGAGCTATCACCAAAGGCATTGTGAAGCAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000660320.1 ENST00000665774.1 ENST00000666423.1 ENST00000671369.1 |
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| CDS TCA 90 bp | AGAATCTTCCAGGTGCGTTTTTATAATGACACTCTATCAAGCCACTaGGATCAACTGCCAGAGCTCAATCTGCTACAGGAATCTTGTGAT | + |
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Preference number: 5 (lower is better) Translates to: RIFQVRFYNDTLSSH*DQLPELNLLQESCD Trigger: ATCACAAGATTCCTGTAGCAGATTGAGCTCTGGCAGTTGATCTCAGTGGCTTGATAGAGTGTCATTATAAAAACGCACCTGGAAGATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000514600.5 |
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| CDS GCA 90 bp | AGGTGCGTTTTTATAATGACACTCTATCAAGCCACTGAGATCAACTaGCAGAGCTCAATCTGCTACAGGAATCTTGCTAGAAGAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: RCVFIMTLYQATEIN*QSSICYRNLARREE Trigger: TTCTTCTCTTCTAGCAAGATTCCTGTAGCAGATTGAGCTCTGGCAGTTGATCTCAGTGGCTTGATAGAGTGTCATTATAAAAACGCACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512536.6 |
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| CDS GCA 90 bp | ACTGGTTCTCAGGAACTCACACAGGTCTTTTCTGTTTGGTACAGATaGTCAGATGGGAATATCCAAGGTTTAACCTACAAATTATCAGGG | + |
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Preference number: 5 (lower is better) Translates to: TGSQELTQVFSVWYR*SDGNIQGLTYKLSG Trigger: CCCTGATAATTTGTAGGTTAAACCTTGGATATTCCCATCTGAGCATCTGTACCAAACAGAAAAGACCTGTGTGAGTTCCTGAGAACCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662849.1 |
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| CDS CCA 90 bp | TCCAATGAAACATGGTCTTGTAGGTCTCTTCCTCCCACTCTGCTTTaGATTGTAAATCTTGCCTCAGTATCTTCCTCAGTAAACTTTGGA | + |
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Preference number: 5 (lower is better) Translates to: SNETWSCRSLPPTLL*IVNLASVSSSVNFG Trigger: TCCAAAGTTTACTGAGGAAGATACTGAGGCAAGATTTACAATCCAAAGCAGAGTGGGAGGAAGAGACCTACAAGACCATGTTTCATTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514600.5 |
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| CDS CCA 90 bp | AAGGAACTAGAATTTAACCACCCATTAAGAGTCCAGATCAGGCCTTaGATTCACCTTGGTCTTCTGAGGTTGTCTTTTCCACAGAATCTT | + |
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Preference number: 5 (lower is better) Translates to: KELEFNHPLRVQIRP*IHLGLLRLSFPQNL Trigger: AAGATTCTGTGGAAAAGACAACCTCAGAAGACCAAGGTGAATCCAAGGCCTGATCTGGACTCTTAATGGGTGGTTAAATTCTAGTTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000512536.6 ENST00000666002.1 |
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| CDS CCA 90 bp | TATCCCATTGGTAACCCAGAAAGGTGTATTGTGCTTCTTCAGAGGTaGAGGCAAACTGCAGCTTCTACATCAGTTGTTTTGGATAAAACT | + |
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Preference number: 5 (lower is better) Translates to: YPIGNPERCIVLLQR*RQTAASTSVVLDKT Trigger: AGTTTTATCCAAAACAACTGATGTAGAAGCTGCAGTTTGCCTCCACCTCTGAAGAAGCACAATACACCTTTCTGGGTTACCAATGGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000653774.1 ENST00000654802.1 ENST00000665179.1 ENST00000667784.1 ENST00000671369.1 |
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| CDS CCA 90 bp | CCTGTGTGTGATTTAAAACACTCACTCTCCCCTCAGAGAGATATTTaGCCAATGCATTCTGTGCTAACAGTACAGTTCCATAGAATAAGC | + |
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Preference number: 5 (lower is better) Translates to: PVCDLKHSLSPQRDI*PMHSVLTVQFHRIS Trigger: GCTTATTCTATGGAACTGTACTGTTAGCACAGAATGCATTGGCCAAATATCTCTCTGAGGGGAGAGTGAGTGTTTTAAATCACACACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000656980.1 ENST00000661963.1 ENST00000666325.1 ENST00000667784.1 |
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| CDS GCA 90 bp | AGGTGCGTTTTTATAATGACACTCTATCAAGCCACTGAGATCAACTaGCAGAGCTCAATCTGCTACAGGAATCTTGTGATAAAACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: RCVFIMTLYQATEIN*QSSICYRNLVIKQE Trigger: TTCCTGTTTTATCACAAGATTCCTGTAGCAGATTGAGCTCTGGCAGTTGATCTCAGTGGCTTGATAGAGTGTCATTATAAAAACGCACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000514600.5 |
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| CDS TCA 90 bp | ACATTACTTGAAATGTTAGCATGGCATTGGAATAGTGGGGAAGGCTaGTGCAATTATCCAGAAGGTCTGTTTATTCCTTCTTCATTCCTC | + |
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Preference number: 5 (lower is better) Translates to: TLLEMLAWHWNSGEG*CNYPEGLFIPSSFL Trigger: GAGGAATGAAGAAGGAATAAACAGACCTTCTGGATAATTGCATCAGCCTTCCCCACTATTCCAATGCCATGCTAACATTTCAAGTAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 19 transcripts: ENST00000505874.2 ENST00000514600.5 ENST00000653774.1 ENST00000654802.1 ENST00000656520.1 ENST00000658598.1 ENST00000659677.1 ENST00000660118.1 ENST00000660519.1 ENST00000661479.1 ENST00000663598.1 ENST00000665179.1 ENST00000665542.1 ENST00000666712.1 ENST00000667051.1 ENST00000668210.1 ENST00000668713.1 ENST00000668859.1 ENST00000670649.1 |
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| CDS GCA 90 bp | ACATGGAGTACTCATGTCTTAGGGATGATTTGCATGTCTCTGTATTaGTTCCTTAAACTGAACTGTGAGATGCTATCATTACTATCAGGG | + |
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Preference number: 5 (lower is better) Translates to: TWSTHVLGMICMSLY*FLKLNCEMLSLLSG Trigger: CCCTGATAGTAATGATAGCATCTCACAGTTCAGTTTAAGGAAGCAATACAGAGACATGCAAATCATCCCTAAGACATGAGTACTCCATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655762.1 ENST00000658661.1 ENST00000663909.1 ENST00000666434.1 |
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| CDS TCA 72 bp | CCTTGCATGTCCCAAACTGGGCTGGTAGGGGTCCAGTaGAAGGCAGCTACCCCAGCCGGATGCTCCACCCTG | + |
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Preference number: 6 (lower is better) Translates to: PCMSQTGLVGVQ*KAATPAGCSTL Trigger: CAGGGTGGAGCATCCGGCTGGGGTAGCTGCCTTTCACTGGACCCCTACCAGCCCAGTTTGGGACATGCAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000654116.1 ENST00000655762.1 ENST00000658661.1 ENST00000659104.1 ENST00000666434.1 ENST00000670981.1 |
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| CDS TCA 72 bp | TGGCCTAGTAGTCACAGTCTACAAGGGTGCTGGCTCTaGCCCTCAACGAGGGACTGTCCATCTTGGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: WPSSHSLQGCWL*PSTRDCPSWAS Trigger: TGAGGCCCAAGATGGACAGTCCCTCGTTGAGGGTCAGAGCCAGCACCCTTGTAGACTGTGACTACTAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000654116.1 ENST00000655762.1 ENST00000658661.1 ENST00000659104.1 ENST00000663909.1 ENST00000666434.1 ENST00000670981.1 |
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| CDS GCA 72 bp | AATGAAGCCAGGCACACCGAGAGAGGACAGGACACGTaGTTCAAACTGGAGCGTGTGAGATGCAGGCTAAAG | + |
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Preference number: 6 (lower is better) Translates to: NEARHTERGQDT*FKLERVRCRLK Trigger: CTTTAGCCTGCATCTCACACGCTCCAGTTTGAAGCACGTGTCCTGTCCTCTCTCGGTGTGCCTGGCTTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513895.1 |
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| CDS CCA 72 bp | ACACGTGCATCCTCTGCCAGCTTTCCCAGGCTTGAGTaGTGGGCAGATTCATATCCTAGGGGGTACATAGCA | + |
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Preference number: 6 (lower is better) Translates to: TRASSASFPRLE*WADSYPRGYIA Trigger: TGCTATGTACCCCCTAGGATATGAATCTGCCCACCACTCAAGCCTGGGAAAGCTGGCAGAGGATGCACGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000505874.2 ENST00000655762.1 ENST00000658661.1 ENST00000666423.1 |
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| CDS CAA 72 bp | TCCTTCCCACCTTTTATGTTGTTGCTCCAGTGGGAGTaGACTGTACCCGTCCCCCAGCCGAGGCTAAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: SFPPFMLLLQWE*TVPVPQPRLRN Trigger: GTTTCTTAGCCTCGGCTGGGGGACGGGTACAGTCAACTCCCACTGGAGCAACAACATAAAAGGTGGGAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000654116.1 ENST00000655762.1 ENST00000658661.1 ENST00000659104.1 ENST00000666434.1 ENST00000670981.1 |
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| CDS CAA 72 bp | AAGGCAGCTACCCCAGCCGGATGCTCCACCCTGATCTaGCCTTTCCTCAGCATTAAATTCCCCATAGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: KAATPAGCSTLI*PFLSIKFPIAW Trigger: CCAAGCTATGGGGAATTTAATGCTGAGGAAAGGCAAGATCAGGGTGGAGCATCCGGCTGGGGTAGCTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000654116.1 ENST00000655762.1 ENST00000658661.1 ENST00000659104.1 ENST00000666434.1 ENST00000670981.1 |
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| CDS CAA 72 bp | GTAAAACACGTGCATCCTCTGCCAGCTTTCCCAGGCTaGAGTGGTGGGCAGATTCATATCCTAGGGGGTACA | + |
|
Preference number: 6 (lower is better) Translates to: VKHVHPLPAFPG*SGGQIHILGGT Trigger: TGTACCCCCTAGGATATGAATCTGCCCACCACTCAAGCCTGGGAAAGCTGGCAGAGGATGCACGTGTTTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000505874.2 ENST00000655762.1 ENST00000658661.1 ENST00000666423.1 |
||
| CDS CAA 72 bp | GTAAAACACGTGCATCCTCTGCCAGCTTTCCCAGGCTaGAGTGGTGGGCAGATTCCTTGGTCTTCTGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VKHVHPLPAFPG*SGGQIPWSSEV Trigger: AACCTCAGAAGACCAAGGAATCTGCCCACCACTCAAGCCTGGGAAAGCTGGCAGAGGATGCACGTGTTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000660519.1 ENST00000661081.1 ENST00000661479.1 ENST00000666325.1 ENST00000666434.1 ENST00000667051.1 ENST00000668713.1 |
||
| CDS GCA 72 bp | GGACAGGACACGTGCTTCAAACTGGAGCGTGTGAGATaGAGGCTAAAGCTATATCCTAGGGGGTACATAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GQDTCFKLERVR*RLKLYPRGYIA Trigger: TGCTATGTACCCCCTAGGATATAGCTTTAGCCTGCATCTCACACGCTCCAGTTTGAAGCACGTGTCCTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000513895.1 |
||
| CDS CCA 72 bp | GGTAACCCAGAAAGGTGTATTGTGCTTCTTCAGAGGTaGAGGCAAACTGCAGCTGCCACAAGGAGCAACACA | + |
|
Preference number: 6 (lower is better) Translates to: GNPERCIVLLQR*RQTAAATRSNT Trigger: TGTGTTGCTCCTTGTGGCAGCTGCAGTTTGCCTCCACCTCTGAAGAAGCACAATACACCTTTCTGGGTTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665542.1 |
||
| CDS CAA 72 bp | ATCACTGCAGATTCCTGGCCACAGCAAAGAGGAAGCTaGGGTTTGCATGTCCAGGACCTCCACCCTAAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: ITADSWPQQRGS*GLHVQDLHPKY Trigger: ATACTTAGGGTGGAGGTCCTGGACATGCAAACCCAAGCTTCCTCTTTGCTGTGGCCAGGAATCTGCAGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000503208.1 ENST00000514600.5 ENST00000654802.1 ENST00000656520.1 ENST00000659677.1 ENST00000660118.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000663598.1 ENST00000665179.1 ENST00000665542.1 ENST00000668713.1 ENST00000668859.1 |
||
| CDS CAA 90 bp | TCTACAAGGGTGCTGGCTCTGACCCTCAACGAGGGACTGTCCATCTaGGGCCTCATTATTCAGTTTGAAGTTATTGCCTGTCCTGTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: STRVLALTLNEGLSI*GLIIQFEVIACPVQ Trigger: TTGGACAGGACAGGCAATAACTTCAAACTGAATAATGAGGCCCAAGATGGACAGTCCCTCGTTGAGGGTCAGAGCCAGCACCCTTGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000654116.1 ENST00000655762.1 ENST00000658661.1 ENST00000659104.1 ENST00000663909.1 ENST00000666434.1 ENST00000670981.1 |
||
| CDS TCA 72 bp | GAGTCCAGATCAGGCCTTGGATTCACCTTGGTCTTCTaGGGTTGTCTTTTCCACAGAATCTTCCAGGTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: ESRSGLGFTLVF*GCLFHRIFQVR Trigger: ACGCACCTGGAAGATTCTGTGGAAAAGACAACCTCAGAAGACCAAGGTGAATCCAAGGCCTGATCTGGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000512536.6 ENST00000666002.1 |
||
| CDS GCA 72 bp | GGAAGTATCCCATTGGTAACCCAGAAAGGTGTATTGTaGTTCTTCAGAGGTGGAGGCAAACTGCAGCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GSIPLVTQKGVL*FFRGGGKLQLP Trigger: TGGCAGCTGCAGTTTGCCTCCACCTCTGAAGAAGCACAATACACCTTTCTGGGTTACCAATGGGATACTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665542.1 |
||
| CDS CCA 72 bp | TTGTCCTTGTCCATATGGAACTCTAGCTCTAGGAGTTaGCCTAGTAGTCACAGTCTACAAGGGTGCTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSLSIWNSSSRS*PSSHSLQGCWL Trigger: GAGCCAGCACCCTTGTAGACTGTGACTACTAGGCCAACTCCTAGAGCTAGAGTTCCATATGGACAAGGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000654116.1 ENST00000655762.1 ENST00000658661.1 ENST00000659104.1 ENST00000663909.1 ENST00000666434.1 ENST00000670981.1 |
||
| CDS CAA 72 bp | GTAAAACACGTGCATCCTCTGCCAGCTTTCCCAGGCTaGAGTGGTGGGCAGATTCCCAGATTTTACAATGCT | + |
|
Preference number: 6 (lower is better) Translates to: VKHVHPLPAFPG*SGGQIPRFYNA Trigger: AGCATTGTAAAATCTGGGAATCTGCCCACCACTCAAGCCTGGGAAAGCTGGCAGAGGATGCACGTGTTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 25 transcripts: ENST00000514600.5 ENST00000653774.1 ENST00000654116.1 ENST00000656520.1 ENST00000656980.1 ENST00000658598.1 ENST00000659104.1 ENST00000659677.1 ENST00000660118.1 ENST00000660320.1 ENST00000660556.1 ENST00000661963.1 ENST00000662849.1 ENST00000663598.1 ENST00000663909.1 ENST00000665179.1 ENST00000665542.1 ENST00000665774.1 ENST00000666712.1 ENST00000667784.1 ENST00000668210.1 ENST00000668859.1 ENST00000670649.1 ENST00000670981.1 ENST00000671369.1 |
||
| CDS CAA 72 bp | TCCACGAGGGCAGCAACCATCTCCCTTCTCAGAACGTaGTCCCAAATGATTGTCTTTCTTCTTAGGCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: STRAATISLLRT*SQMIVFLLRPS Trigger: TGAGGGCCTAAGAAGAAAGACAATCATTTGGGACAACGTTCTGAGAAGGGAGATGGTTGCTGCCCTCGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000654116.1 ENST00000655762.1 ENST00000658661.1 ENST00000659104.1 ENST00000663909.1 ENST00000666434.1 ENST00000670981.1 |
||
| CDS CAA 72 bp | GTGCTGGCTCTGACCCTCAACGAGGGACTGTCCATCTaGGGCCTCATTATTCAGTTTGAAGTTATTGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VLALTLNEGLSI*GLIIQFEVIAC Trigger: ACAGGCAATAACTTCAAACTGAATAATGAGGCCCAAGATGGACAGTCCCTCGTTGAGGGTCAGAGCCAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000654116.1 ENST00000655762.1 ENST00000658661.1 ENST00000659104.1 ENST00000663909.1 ENST00000666434.1 ENST00000670981.1 |
||
| CDS CAA 90 bp | TCAATCACTGCAGATTCCTGGCCACAGCAAAGAGGAAGCTTGGGTTaGCATGTCCAGGACCTCCACCCTAAGTATTCAGGCACTCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SITADSWPQQRGSLG*HVQDLHPKYSGTLF Trigger: AAAAAGAGTGCCTGAATACTTAGGGTGGAGGTCCTGGACATGCAAACCCAAGCTTCCTCTTTGCTGTGGCCAGGAATCTGCAGTGATTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000503208.1 ENST00000514600.5 ENST00000654802.1 ENST00000656520.1 ENST00000659677.1 ENST00000660118.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000663598.1 ENST00000665179.1 ENST00000665542.1 ENST00000668713.1 ENST00000668859.1 |
||
| CDS GCA 72 bp | GGAAGTATCCCATTGGTAACCCAGAAAGGTGTATTGTaGTTCTTCAGAGGTGGAGGCAAACTGCAGCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GSIPLVTQKGVL*FFRGGGKLQLF Trigger: GAAGAGCTGCAGTTTGCCTCCACCTCTGAAGAAGCACAATACACCTTTCTGGGTTACCAATGGGATACTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000512536.6 ENST00000513895.1 ENST00000653614.1 ENST00000655762.1 ENST00000659104.1 ENST00000659677.1 ENST00000660320.1 ENST00000660519.1 ENST00000661479.1 ENST00000661963.1 ENST00000664696.1 ENST00000666002.1 ENST00000666712.1 ENST00000668210.1 ENST00000668859.1 |
||
| CDS CCA 72 bp | CTATTACTGAGGGGTCATTGCTGCTTTCCTGAAACCTaGTGGCCCCTGTCTATAACCTGTGAAATGGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LLLRGHCCFPET*WPLSITCEMVV Trigger: TACCACCATTTCACAGGTTATAGACAGGGGCCACCAGGTTTCAGGAAAGCAGCAATGACCCCTCAGTAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 35 transcripts: ENST00000505874.2 ENST00000512536.6 ENST00000513895.1 ENST00000514600.5 ENST00000653614.1 ENST00000654116.1 ENST00000656520.1 ENST00000656980.1 ENST00000658598.1 ENST00000658661.1 ENST00000659104.1 ENST00000659677.1 ENST00000660118.1 ENST00000660320.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000661479.1 ENST00000661963.1 ENST00000662849.1 ENST00000663598.1 ENST00000663909.1 ENST00000664696.1 ENST00000665774.1 ENST00000666002.1 ENST00000666325.1 ENST00000666423.1 ENST00000666434.1 ENST00000666712.1 ENST00000667051.1 ENST00000668210.1 ENST00000668713.1 ENST00000668859.1 ENST00000670649.1 ENST00000670981.1 |
||
| CDS CCA 72 bp | GGTAACCCAGAAAGGTGTATTGTGCTTCTTCAGAGGTaGAGGCAAACTGCAGCTCTTCTTCACCAACACAGT | + |
|
Preference number: 6 (lower is better) Translates to: GNPERCIVLLQR*RQTAALLHQHS Trigger: ACTGTGTTGGTGAAGAAGAGCTGCAGTTTGCCTCCACCTCTGAAGAAGCACAATACACCTTTCTGGGTTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000512536.6 ENST00000513895.1 ENST00000653614.1 ENST00000655762.1 ENST00000659104.1 ENST00000659677.1 ENST00000660320.1 ENST00000660519.1 ENST00000661479.1 ENST00000661963.1 ENST00000664696.1 ENST00000666002.1 ENST00000666712.1 ENST00000668210.1 ENST00000668859.1 |
||
| CDS CCA 72 bp | CTTCACAATTGCGTTGTTGCTTTAGCCAGAACGCTGTaGCATTTTACCAGCCTTTCCCTTTATCAGGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LHNCVVALARTL*HFTSLSLYQGG Trigger: GCCTCCCTGATAAAGGGAAAGGCTGGTAAAATGCCACAGCGTTCTGGCTAAAGCAACAACGCAATTGTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000660320.1 ENST00000665774.1 ENST00000666423.1 |
||
| CDS CAA 72 bp | TCTGCGCCACCACCAAGGGACAGTCCCATCTGTTATTaGCTCTCAGCTTTGCTTACTGATAAAACAGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SAPPPRDSPICY*LSALLTDKTGR Trigger: CCTTCCTGTTTTATCAGTAAGCAAAGCTGAGAGCAAATAACAGATGGGACTGTCCCTTGGTGGTGGCGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512536.6 |
||
| CDS CAA 90 bp | TCTGTTAAATCCACGAGGGCAGCAACCATCTCCCTTCTCAGAACGTaGTCCCAAATGATTGTCTTTCTTCTTAGGCCCTCACAACACCCT | + |
|
Preference number: 6 (lower is better) Translates to: SVKSTRAATISLLRT*SQMIVFLLRPSQHP Trigger: AGGGTGTTGTGAGGGCCTAAGAAGAAAGACAATCATTTGGGACAACGTTCTGAGAAGGGAGATGGTTGCTGCCCTCGTGGATTTAACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000654116.1 ENST00000655762.1 ENST00000658661.1 ENST00000659104.1 ENST00000663909.1 ENST00000666434.1 ENST00000670981.1 |
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| CDS GCA 72 bp | ACTGGAGGAAGATTGTGCTATATTTCATGCATGCTCTaGGCCACCACCAAGGGACAGTCCCATCTGTTATTT | + |
|
Preference number: 6 (lower is better) Translates to: TGGRLCYISCML*ATTKGQSHLLF Trigger: AAATAACAGATGGGACTGTCCCTTGGTGGTGGCGCAGAGCATGCATGAAATATAGCACAATCTTCCTCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512536.6 |
||
| CDS GCA 72 bp | GGAAGTATCCCATTGGTAACCCAGAAAGGTGTATTGTaGTTCTTCAGAGGTGGAGGCAAACTGCAGCTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: GSIPLVTQKGVL*FFRGGGKLQLL Trigger: TAGAAGCTGCAGTTTGCCTCCACCTCTGAAGAAGCACAATACACCTTTCTGGGTTACCAATGGGATACTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000653774.1 ENST00000654802.1 ENST00000665179.1 ENST00000667784.1 ENST00000671369.1 |
||
| CDS GCA 72 bp | GTGTTCACGGTTCTAAGTGGTAAACGGACTCTCTCTTaGAAAGTCAGCCTATATCCTAGGGGGTACATAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VFTVLSGKRTLS*KVSLYPRGYIA Trigger: TGCTATGTACCCCCTAGGATATAGGCTGACTTTGCAAGAGAGAGTCCGTTTACCACTTAGAACCGTGAACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000663598.1 ENST00000670981.1 |
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| CDS CCA 72 bp | CCCATTAAGAGTCCAGATCAGGCCTTGGATTCACCTTaGTCTTCTGAGGTTGTCTTTTCCACAGAATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PIKSPDQALDSP*SSEVVFSTESS Trigger: GGAAGATTCTGTGGAAAAGACAACCTCAGAAGACCAAGGTGAATCCAAGGCCTGATCTGGACTCTTAATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000512536.6 ENST00000666002.1 |
||
| CDS CAA 72 bp | ACGAGGGACTGTCCATCTTGGGCCTCATTATTCAGTTaGAAGTTATTGCCTGTCCTGTCCAACACAAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TRDCPSWASLFS*KLLPVLSNTSF Trigger: GAAGCTTGTGTTGGACAGGACAGGCAATAACTTCAAACTGAATAATGAGGCCCAAGATGGACAGTCCCTCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000654116.1 ENST00000655762.1 ENST00000658661.1 ENST00000659104.1 ENST00000663909.1 ENST00000666434.1 ENST00000670981.1 |
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| CDS GCA 72 bp | TCATATCACACTTTCCAACTATTACTGAGGGGTCATTaGTGCTTTCCTGAAACCTGGTGGCCCCTGTCTATA | + |
|
Preference number: 6 (lower is better) Translates to: SYHTFQLLLRGH*CFPETWWPLSI Trigger: TATAGACAGGGGCCACCAGGTTTCAGGAAAGCAGCAATGACCCCTCAGTAATAGTTGGAAAGTGTGATATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 35 transcripts: ENST00000505874.2 ENST00000512536.6 ENST00000513895.1 ENST00000514600.5 ENST00000653614.1 ENST00000654116.1 ENST00000656520.1 ENST00000656980.1 ENST00000658598.1 ENST00000658661.1 ENST00000659104.1 ENST00000659677.1 ENST00000660118.1 ENST00000660320.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000661479.1 ENST00000661963.1 ENST00000662849.1 ENST00000663598.1 ENST00000663909.1 ENST00000664696.1 ENST00000665774.1 ENST00000666002.1 ENST00000666325.1 ENST00000666423.1 ENST00000666434.1 ENST00000666712.1 ENST00000667051.1 ENST00000668210.1 ENST00000668713.1 ENST00000668859.1 ENST00000670649.1 ENST00000670981.1 |
||
| CDS GCA 72 bp | GGAAGTATCCCATTGGTAACCCAGAAAGGTGTATTGTaGTTCTTCAGAGGTGGAGGCAAACTGCAGCTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: GSIPLVTQKGVL*FFRGGGKLQLL Trigger: TAAAAGCTGCAGTTTGCCTCCACCTCTGAAGAAGCACAATACACCTTTCTGGGTTACCAATGGGATACTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 21 transcripts: ENST00000505874.2 ENST00000514600.5 ENST00000654116.1 ENST00000656520.1 ENST00000656980.1 ENST00000658598.1 ENST00000658661.1 ENST00000660118.1 ENST00000660556.1 ENST00000661081.1 ENST00000662849.1 ENST00000663598.1 ENST00000663909.1 ENST00000665774.1 ENST00000666325.1 ENST00000666423.1 ENST00000666434.1 ENST00000667051.1 ENST00000668713.1 ENST00000670649.1 ENST00000670981.1 |
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| CDS CCA 72 bp | GGTAACCCAGAAAGGTGTATTGTGCTTCTTCAGAGGTaGAGGCAAACTGCAGCTTTTATTTTCCTCACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GNPERCIVLLQR*RQTAAFIFLTS Trigger: AGAGGTGAGGAAAATAAAAGCTGCAGTTTGCCTCCACCTCTGAAGAAGCACAATACACCTTTCTGGGTTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 21 transcripts: ENST00000505874.2 ENST00000514600.5 ENST00000654116.1 ENST00000656520.1 ENST00000656980.1 ENST00000658598.1 ENST00000658661.1 ENST00000660118.1 ENST00000660556.1 ENST00000661081.1 ENST00000662849.1 ENST00000663598.1 ENST00000663909.1 ENST00000665774.1 ENST00000666325.1 ENST00000666423.1 ENST00000666434.1 ENST00000667051.1 ENST00000668713.1 ENST00000670649.1 ENST00000670981.1 |
||
| CDS CCA 72 bp | GGTAACCCAGAAAGGTGTATTGTGCTTCTTCAGAGGTaGAGGCAAACTGCAGCTTCTACATCAGTTGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GNPERCIVLLQR*RQTAASTSVVL Trigger: CAAAACAACTGATGTAGAAGCTGCAGTTTGCCTCCACCTCTGAAGAAGCACAATACACCTTTCTGGGTTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653774.1 ENST00000654802.1 ENST00000665179.1 ENST00000667784.1 ENST00000671369.1 |
||
| CDS CAA 90 bp | GTTTGCATGTCCAGGACCTCCACCCTAAGTATTCAGGCACTCTTTTaGACATCATTGCTGTTGTTACTTAGGTGTATCTCCTTGGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VCMSRTSTLSIQALF*TSLLLLLRCISLVV Trigger: CACAACCAAGGAGATACACCTAAGTAACAACAGCAATGATGTCAAAAAGAGTGCCTGAATACTTAGGGTGGAGGTCCTGGACATGCAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000503208.1 ENST00000514600.5 ENST00000654802.1 ENST00000656520.1 ENST00000659677.1 ENST00000660118.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000663598.1 ENST00000665179.1 ENST00000665542.1 ENST00000668713.1 ENST00000668859.1 |
||
| CDS TCA 72 bp | CAGGTGCGTTTTTATAATGACACTCTATCAAGCCACTaGGATCAACTGCCAGAGCTCAATCTGCTACAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QVRFYNDTLSSH*DQLPELNLLQE Trigger: TTCCTGTAGCAGATTGAGCTCTGGCAGTTGATCTCAGTGGCTTGATAGAGTGTCATTATAAAAACGCACCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 33 transcripts: ENST00000512536.6 ENST00000514600.5 ENST00000653774.1 ENST00000654116.1 ENST00000656520.1 ENST00000656980.1 ENST00000658598.1 ENST00000659104.1 ENST00000659677.1 ENST00000660118.1 ENST00000660320.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000661479.1 ENST00000661963.1 ENST00000662849.1 ENST00000663909.1 ENST00000664696.1 ENST00000665179.1 ENST00000665542.1 ENST00000665774.1 ENST00000666002.1 ENST00000666325.1 ENST00000666434.1 ENST00000666712.1 ENST00000667051.1 ENST00000667784.1 ENST00000668210.1 ENST00000668713.1 ENST00000668859.1 ENST00000670649.1 ENST00000671369.1 |
||
| CDS TCA 72 bp | ATGCCTTTGGTGATAGCTCTTGCTGGGACATGTGGATaGATGCAGTTTTCTCTCTTCACAATTGCGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: MPLVIALAGTCG*MQFSLFTIALL Trigger: CAACAACGCAATTGTGAAGAGAGAAAACTGCATTCATCCACATGTCCCAGCAAGAGCTATCACCAAAGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000660320.1 ENST00000665774.1 ENST00000666423.1 ENST00000671369.1 |
||
| CDS GCA 72 bp | GATGAATGCAGTTTTCTCTCTTCACAATTGCGTTGTTaGTTTAGCCAGAACGCTGTGGCATTTTACCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: DECSFLSSQLRC*FSQNAVAFYQP Trigger: AGGCTGGTAAAATGCCACAGCGTTCTGGCTAAAGCAACAACGCAATTGTGAAGAGAGAAAACTGCATTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000660320.1 ENST00000665774.1 ENST00000666423.1 ENST00000671369.1 |
||
| CDS CCA 72 bp | GAATTTAACCACCCATTAAGAGTCCAGATCAGGCCTTaGATTCACCTTGGTCTTCTGAGGTTGTCTTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: EFNHPLRVQIRP*IHLGLLRLSFP Trigger: TGGAAAAGACAACCTCAGAAGACCAAGGTGAATCCAAGGCCTGATCTGGACTCTTAATGGGTGGTTAAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000512536.6 ENST00000666002.1 |
||
| CDS CCA 72 bp | TTGTCTTTCTTCTTAGGCCCTCACAACACCCTCACATaGAGTACTCATGTCTTAGGGATGATTTGCATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSFFLGPHNTLT*STHVLGMICMS Trigger: AGACATGCAAATCATCCCTAAGACATGAGTACTCCATGTGAGGGTGTTGTGAGGGCCTAAGAAGAAAGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000654116.1 ENST00000655762.1 ENST00000658661.1 ENST00000659104.1 ENST00000663909.1 ENST00000666434.1 ENST00000670981.1 |
||
| CDS CCA 72 bp | CACAATGCCTTTGGTGATAGCTCTTGCTGGGACATGTaGATGAATGCAGTTTTCTCTCTTCACAATTGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: HNAFGDSSCWDM*MNAVFSLHNCV Trigger: AACGCAATTGTGAAGAGAGAAAACTGCATTCATCCACATGTCCCAGCAAGAGCTATCACCAAAGGCATTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000660320.1 ENST00000665774.1 ENST00000666423.1 ENST00000671369.1 |
||
| CDS CAA 72 bp | CACTGGTTCTCAGGAACTCACACAGGTCTTTTCTGTTaGGTACAGATGCTCAGATGGGAATATCCAAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: HWFSGTHTGLFC*VQMLRWEYPRF Trigger: AAACCTTGGATATTCCCATCTGAGCATCTGTACCAAACAGAAAAGACCTGTGTGAGTTCCTGAGAACCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000653774.1 ENST00000656520.1 ENST00000658598.1 ENST00000660519.1 ENST00000661479.1 ENST00000662849.1 ENST00000665179.1 ENST00000665542.1 ENST00000667051.1 ENST00000668210.1 ENST00000668859.1 |
||
| CDS CAA 90 bp | TCCAGGACCTCCACCCTAAGTATTCAGGCACTCTTTTTGACATCATaGCTGTTGTTACTTAGGTGTATCTCCTTGGTTGTGTTTCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SRTSTLSIQALFLTS*LLLLRCISLVVFLH Trigger: ATGGAGAAACACAACCAAGGAGATACACCTAAGTAACAACAGCAATGATGTCAAAAAGAGTGCCTGAATACTTAGGGTGGAGGTCCTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000503208.1 ENST00000514600.5 ENST00000654802.1 ENST00000656520.1 ENST00000659677.1 ENST00000660118.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000663598.1 ENST00000665179.1 ENST00000665542.1 ENST00000668713.1 ENST00000668859.1 |
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| CDS CAA 90 bp | TGGAATGAGCACTGGTTCTCAGGAACTCACACAGGTCTTTTCTGTTaGGTACAGATGCTCAGATGGGAATATCCAAGGTTTAACCTACAA | + |
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Preference number: 6 (lower is better) Translates to: WNEHWFSGTHTGLFC*VQMLRWEYPRFNLQ Trigger: TTGTAGGTTAAACCTTGGATATTCCCATCTGAGCATCTGTACCAAACAGAAAAGACCTGTGTGAGTTCCTGAGAACCAGTGCTCATTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000653774.1 ENST00000656520.1 ENST00000658598.1 ENST00000660519.1 ENST00000661479.1 ENST00000662849.1 ENST00000665179.1 ENST00000665542.1 ENST00000667051.1 ENST00000668210.1 ENST00000668859.1 |
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| CDS GCA 72 bp | CTGAACTTTGAAAGGTGGAATTTTAGATACAGTCTGTaGTCTCAATCACTGCAGATTCCTGGCCACAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LNFERWNFRYSL*SQSLQIPGHSK Trigger: TTTGCTGTGGCCAGGAATCTGCAGTGATTGAGAGCACAGACTGTATCTAAAATTCCACCTTTCAAAGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000503208.1 ENST00000514600.5 ENST00000654802.1 ENST00000656520.1 ENST00000659677.1 ENST00000660118.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000663598.1 ENST00000665179.1 ENST00000665542.1 ENST00000668713.1 ENST00000668859.1 |
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| CDS GCA 72 bp | ACACATCAACTGTTTCTGATATCCTTTATGCTTGCTTaGCCTTCAGTCATGTTCCAACTCCAGAGTGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: THQLFLISFMLA*PSVMFQLQSVH Trigger: ATGCACACTCTGGAGTTGGAACATGACTGAAGGGCAAGCAAGCATAAAGGATATCAGAAACAGTTGATGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000514600.5 ENST00000653774.1 ENST00000654802.1 ENST00000656520.1 ENST00000658598.1 ENST00000660519.1 ENST00000661479.1 ENST00000665179.1 ENST00000665542.1 ENST00000666712.1 ENST00000667051.1 ENST00000668210.1 ENST00000668859.1 |
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| CDS CCA 72 bp | ACTGGTTCTCAGGAACTCACACAGGTCTTTTCTGTTTaGTACAGATGCTCAGATGGGAATATCCAAGGTTTA | + |
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Preference number: 6 (lower is better) Translates to: TGSQELTQVFSV*YRCSDGNIQGL Trigger: TAAACCTTGGATATTCCCATCTGAGCATCTGTACCAAACAGAAAAGACCTGTGTGAGTTCCTGAGAACCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000653774.1 ENST00000656520.1 ENST00000658598.1 ENST00000660519.1 ENST00000661479.1 ENST00000662849.1 ENST00000665179.1 ENST00000665542.1 ENST00000667051.1 ENST00000668210.1 ENST00000668859.1 |
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| CDS CAA 72 bp | AACACATCAACTGTTTCTGATATCCTTTATGCTTGCTaGCCCTTCAGTCATGTTCCAACTCCAGAGTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: NTSTVSDILYAC*PFSHVPTPECA Trigger: TGCACACTCTGGAGTTGGAACATGACTGAAGGGCAAGCAAGCATAAAGGATATCAGAAACAGTTGATGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000514600.5 ENST00000653774.1 ENST00000654802.1 ENST00000656520.1 ENST00000658598.1 ENST00000660519.1 ENST00000661479.1 ENST00000665179.1 ENST00000665542.1 ENST00000666712.1 ENST00000667051.1 ENST00000668210.1 ENST00000668859.1 |
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| CDS CAA 90 bp | ACCTCCACCCTAAGTATTCAGGCACTCTTTTTGACATCATTGCTGTaGTTACTTAGGTGTATCTCCTTGGTTGTGTTTCTCCATTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: TSTLSIQALFLTSLL*LLRCISLVVFLHSA Trigger: AGCAGAATGGAGAAACACAACCAAGGAGATACACCTAAGTAACAACAGCAATGATGTCAAAAAGAGTGCCTGAATACTTAGGGTGGAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000503208.1 ENST00000514600.5 ENST00000654802.1 ENST00000656520.1 ENST00000659677.1 ENST00000660118.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000663598.1 ENST00000665179.1 ENST00000665542.1 ENST00000668713.1 ENST00000668859.1 |
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| CDS GCA 72 bp | TCTTCTGAGGTTGTCTTTTCCACAGAATCTTCCAGGTaGGTTTTTATAATGACACTCTATCAAGCCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: SSEVVFSTESSR*VFIMTLYQATE Trigger: CTCAGTGGCTTGATAGAGTGTCATTATAAAAACGCACCTGGAAGATTCTGTGGAAAAGACAACCTCAGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 33 transcripts: ENST00000512536.6 ENST00000514600.5 ENST00000653774.1 ENST00000654116.1 ENST00000656520.1 ENST00000656980.1 ENST00000658598.1 ENST00000659104.1 ENST00000659677.1 ENST00000660118.1 ENST00000660320.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000661479.1 ENST00000661963.1 ENST00000662849.1 ENST00000663909.1 ENST00000664696.1 ENST00000665179.1 ENST00000665542.1 ENST00000665774.1 ENST00000666002.1 ENST00000666325.1 ENST00000666434.1 ENST00000666712.1 ENST00000667051.1 ENST00000667784.1 ENST00000668210.1 ENST00000668713.1 ENST00000668859.1 ENST00000670649.1 ENST00000671369.1 |
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| CDS GCA 72 bp | CAGGAACTCACACAGGTCTTTTCTGTTTGGTACAGATaGTCAGATGGGAATATCCAAGGTTTAACCTACAAA | + |
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Preference number: 6 (lower is better) Translates to: QELTQVFSVWYR*SDGNIQGLTYK Trigger: TTTGTAGGTTAAACCTTGGATATTCCCATCTGAGCATCTGTACCAAACAGAAAAGACCTGTGTGAGTTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000653774.1 ENST00000656520.1 ENST00000658598.1 ENST00000660519.1 ENST00000661479.1 ENST00000662849.1 ENST00000665179.1 ENST00000665542.1 ENST00000667051.1 ENST00000668210.1 ENST00000668859.1 |
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| CDS GCA 72 bp | ACCCTCACATGGAGTACTCATGTCTTAGGGATGATTTaGATGTCTCTGTATTGCTTCCTTAAACTGAACTGT | + |
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Preference number: 6 (lower is better) Translates to: TLTWSTHVLGMI*MSLYCFLKLNC Trigger: ACAGTTCAGTTTAAGGAAGCAATACAGAGACATGCAAATCATCCCTAAGACATGAGTACTCCATGTGAGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000654116.1 ENST00000655762.1 ENST00000658661.1 ENST00000659104.1 ENST00000663909.1 ENST00000666434.1 ENST00000670981.1 |
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| CDS CCA 72 bp | GATTTAAAACACTCACTCTCCCCTCAGAGAGATATTTaGCCAATGCATTCTGTGCTAACAGTACAGTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: DLKHSLSPQRDI*PMHSVLTVQFH Trigger: ATGGAACTGTACTGTTAGCACAGAATGCATTGGCCAAATATCTCTCTGAGGGGAGAGTGAGTGTTTTAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000656980.1 ENST00000661963.1 ENST00000666325.1 ENST00000667784.1 |
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| CDS CAA 72 bp | TTGTATGTGATGACAAAGCTGTTGGGAAGTATCCCATaGGTAACCCAGAAAGGTGTATTGTGCTTCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LYVMTKLLGSIP*VTQKGVLCFFR Trigger: TCTGAAGAAGCACAATACACCTTTCTGGGTTACCAATGGGATACTTCCCAACAGCTTTGTCATCACATACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 42 transcripts: ENST00000505874.2 ENST00000512536.6 ENST00000513895.1 ENST00000514600.5 ENST00000653614.1 ENST00000653774.1 ENST00000654116.1 ENST00000654802.1 ENST00000655762.1 ENST00000656520.1 ENST00000656980.1 ENST00000658598.1 ENST00000658661.1 ENST00000659104.1 ENST00000659677.1 ENST00000660118.1 ENST00000660320.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000661479.1 ENST00000661963.1 ENST00000662849.1 ENST00000663598.1 ENST00000663909.1 ENST00000664696.1 ENST00000665179.1 ENST00000665542.1 ENST00000665774.1 ENST00000666002.1 ENST00000666325.1 ENST00000666423.1 ENST00000666434.1 ENST00000666712.1 ENST00000667051.1 ENST00000667784.1 ENST00000668210.1 ENST00000668713.1 ENST00000668859.1 ENST00000670649.1 ENST00000670981.1 ENST00000671369.1 |
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| CDS CAA 72 bp | TCCACCCTAAGTATTCAGGCACTCTTTTTGACATCATaGCTGTTGTTACTTAGGTGTATCTCCTTGGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: STLSIQALFLTS*LLLLRCISLVV Trigger: CACAACCAAGGAGATACACCTAAGTAACAACAGCAATGATGTCAAAAAGAGTGCCTGAATACTTAGGGTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000503208.1 ENST00000514600.5 ENST00000654802.1 ENST00000656520.1 ENST00000659677.1 ENST00000660118.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000663598.1 ENST00000665179.1 ENST00000665542.1 ENST00000668713.1 ENST00000668859.1 |
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| CDS TCA 72 bp | TTCACTTTTACTCTATGTGTGTCCTTAAAATTGAGGTaGGTCTCTTGTAGTCAGCACATAACTGGGTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: FTFTLCVSLKLR*VSCSQHITGSC Trigger: ACAGGACCCAGTTATGTGCTGACTACAAGAGACTCACCTCAATTTTAAGGACACACATAGAGTAAAAGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653614.1 |
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| CDS CCA 72 bp | ATTATAGATATTACTCCAAAGCTATCCAATGAAACATaGTCTTGTAGGTCTCTTCCTCCCACTCTGCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: IIDITPKLSNET*SCRSLPPTLLW Trigger: CCAAAGCAGAGTGGGAGGAAGAGACCTACAAGACCATGTTTCATTGGATAGCTTTGGAGTAATATCTATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000514600.5 ENST00000654802.1 ENST00000666002.1 |
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| CDS CCA 72 bp | CACACAGGTCTTTTCTGTTTGGTACAGATGCTCAGATaGGAATATCCAAGGTTTAACCTACAAATTATCAGG | + |
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Preference number: 6 (lower is better) Translates to: HTGLFCLVQMLR*EYPRFNLQIIR Trigger: CCTGATAATTTGTAGGTTAAACCTTGGATATTCCCATCTGAGCATCTGTACCAAACAGAAAAGACCTGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662849.1 |
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| CDS CAA 90 bp | GAAACAACAGTAGACAAAGAAAATTGTATTTCTCGGCTGACTGTATaGTCTTTCCTGAGGACCCTCATCATAACAACTTTTTCTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: ETTVDKENCISRLTV*SFLRTLIITTFSLV Trigger: CACCAGAGAAAAAGTTGTTATGATGAGGGTCCTCAGGAAAGACAATACAGTCAGCCGAGAAATACAATTTTCTTTGTCTACTGTTGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000514600.5 ENST00000654802.1 ENST00000666002.1 |
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| CDS CCA 72 bp | AGTCCCAAATATAGCTGTCTATGGCAGCTTTATCTGTaGTTTTGTGGCGTCTTTGATGCTTATTTAAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: SPKYSCLWQLYL*FCGVFDAYLKE Trigger: TTCCTTTAAATAAGCATCAAAGACGCCACAAAACCACAGATAAAGCTGCCATAGACAGCTATATTTGGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666002.1 |
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| CDS CAA 72 bp | CTAAGTATTCAGGCACTCTTTTTGACATCATTGCTGTaGTTACTTAGGTGTATCTCCTTGGTTGTGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LSIQALFLTSLL*LLRCISLVVFL Trigger: GAGAAACACAACCAAGGAGATACACCTAAGTAACAACAGCAATGATGTCAAAAAGAGTGCCTGAATACTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000503208.1 ENST00000514600.5 ENST00000654802.1 ENST00000656520.1 ENST00000659677.1 ENST00000660118.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000663598.1 ENST00000665179.1 ENST00000665542.1 ENST00000668713.1 ENST00000668859.1 |
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| CDS CAA 72 bp | TTCAGAGGTGGAGGCAAACTGCAGCTTCTACATCAGTaGTTTTGGATAAAACTCTTTGAGTTGATAGCTATT | + |
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Preference number: 6 (lower is better) Translates to: FRGGGKLQLLHQ*FWIKLFELIAI Trigger: AATAGCTATCAACTCAAAGAGTTTTATCCAAAACAACTGATGTAGAAGCTGCAGTTTGCCTCCACCTCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000653774.1 ENST00000654802.1 ENST00000665179.1 ENST00000667784.1 ENST00000671369.1 |
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| CDS TCA 72 bp | AATTTTCCCACAATAGAGATCTGTCGATATTTAGCCTaGCCTTTGTGGTCTGCAGCGATGATTGAAAATAAA | + |
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Preference number: 6 (lower is better) Translates to: NFPTIEICRYLA*PLWSAAMIENK Trigger: TTTATTTTCAATCATCGCTGCAGACCACAAAGGTCAGGCTAAATATCGACAGATCTCTATTGTGGGAAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000654116.1 ENST00000655762.1 ENST00000658661.1 ENST00000659104.1 ENST00000663909.1 ENST00000666434.1 ENST00000670981.1 |
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| CDS TCA 72 bp | CTAATATCATCCACATTCATATTATCACCCTGTGTGTaGTTTAAAACACTCACTCTCCCCTCAGAGAGATAT | + |
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Preference number: 6 (lower is better) Translates to: LISSTFILSPCV*FKTLTLPSERY Trigger: ATATCTCTCTGAGGGGAGAGTGAGTGTTTTAAATCACACACAGGGTGATAATATGAATGTGGATGATATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000656980.1 ENST00000661963.1 ENST00000666325.1 ENST00000667784.1 |
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| CDS CCA 72 bp | CACACAGGTCTTTTCTGTTTGGTACAGATGCTCAGATaGGAATATCCAAGGTTTAACCTACAAATCTTAATT | + |
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Preference number: 6 (lower is better) Translates to: HTGLFCLVQMLR*EYPRFNLQILI Trigger: AATTAAGATTTGTAGGTTAAACCTTGGATATTCCCATCTGAGCATCTGTACCAAACAGAAAAGACCTGTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000653774.1 ENST00000656520.1 ENST00000658598.1 ENST00000660519.1 ENST00000661479.1 ENST00000665179.1 ENST00000665542.1 ENST00000667051.1 ENST00000668210.1 ENST00000668859.1 |
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| CDS CAA 72 bp | GCTGTGTTCCTGGAGAAAGTAGATGCCATTAAGATCTaGTTTGAGAATATTGTATGTGATGACAAAGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: AVFLEKVDAIKI*FENIVCDDKAV Trigger: AACAGCTTTGTCATCACATACAATATTCTCAAACAAGATCTTAATGGCATCTACTTTCTCCAGGAACACAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 42 transcripts: ENST00000505874.2 ENST00000512536.6 ENST00000513895.1 ENST00000514600.5 ENST00000653614.1 ENST00000653774.1 ENST00000654116.1 ENST00000654802.1 ENST00000655762.1 ENST00000656520.1 ENST00000656980.1 ENST00000658598.1 ENST00000658661.1 ENST00000659104.1 ENST00000659677.1 ENST00000660118.1 ENST00000660320.1 ENST00000660519.1 ENST00000660556.1 ENST00000661081.1 ENST00000661479.1 ENST00000661963.1 ENST00000662849.1 ENST00000663598.1 ENST00000663909.1 ENST00000664696.1 ENST00000665179.1 ENST00000665542.1 ENST00000665774.1 ENST00000666002.1 ENST00000666325.1 ENST00000666423.1 ENST00000666434.1 ENST00000666712.1 ENST00000667051.1 ENST00000667784.1 ENST00000668210.1 ENST00000668713.1 ENST00000668859.1 ENST00000670649.1 ENST00000670981.1 ENST00000671369.1 |
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| CDS CAA 72 bp | TTGACATCATTGCTGTTGTTACTTAGGTGTATCTCCTaGGTTGTGTTTCTCCATTCTGCTATAAAAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: LTSLLLLLRCIS*VVFLHSAIKTA Trigger: TGCTGTTTTTATAGCAGAATGGAGAAACACAACCAAGGAGATACACCTAAGTAACAACAGCAATGATGTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503208.1 |
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| CDS CAA 72 bp | GTAGACAAAGAAAATTGTATTTCTCGGCTGACTGTATaGTCTTTCCTGAGGACCCTCATCATAACAACTTTT | + |
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Preference number: 6 (lower is better) Translates to: VDKENCISRLTV*SFLRTLIITTF Trigger: AAAAGTTGTTATGATGAGGGTCCTCAGGAAAGACAATACAGTCAGCCGAGAAATACAATTTTCTTTGTCTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000514600.5 ENST00000654802.1 ENST00000666002.1 |
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| CDS CAA 72 bp | AAATTCAGTTCTGGTGTTGATGTCCTTCTGTATCCTTaGAAATTTTTAGACACCGTCAATCTATCTATCAGG | + |
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Preference number: 6 (lower is better) Translates to: KFSSGVDVLLYP*KFLDTVNLSIR Trigger: CCTGATAGATAGATTGACGGTGTCTAAAAATTTCAAAGGATACAGAAGGACATCAACACCAGAACTGAATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000656980.1 ENST00000661963.1 ENST00000666325.1 ENST00000667784.1 |
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