Pregenerated sensors for LINC00612 (Homo sapiens)
Ensembl gene IDs: ENSG00000214851Ensembl transcript IDs: ENST00000538094.2, ENST00000675544.1
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCGACTGCGCCGCCACCATCCTCGCGTTGCCGGGTGGGGCGACGTaGTCCCCGGCCAGGAGCCTCCACCGCTCCGGACCCTGGCCCTAT | + |
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Preference number: 5 (lower is better) Translates to: ADCAATILALPGGAT*SPARSLHRSGPWPY Trigger: ATAGGGCCAGGGTCCGGAGCGGTGGAGGCTCCTGGCCGGGGAGCACGTCGCCCCACCCGGCAACGCGAGGATGGTGGCGGCGCAGTCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS CCA 90 bp | AGTCCTTGGAGCCGGCCCCGGGAGTACTCCCGGAGCCTGCCGCCCTaGAAGCCGCCACGATGGACCGGGCTGAGTCGCCCGCCGGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: SPWSRPREYSRSLPP*KPPRWTGLSRPPEG Trigger: CCCCTCCGGCGGGCGACTCAGCCCGGTCCATCGTGGCGGCTTCCAGGGCGGCAGGCTCCGGGAGTACTCCCGGGGCCGGCTCCAAGGACT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS CCA 90 bp | CCCCAAAGCAGCCGACTGCGCCGCCACCATCCTCGCGTTGCCGGGTaGGGCGACGTGCTCCCCGGCCAGGAGCCTCCACCGCTCCGGACC | + |
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Preference number: 5 (lower is better) Translates to: PQSSRLRRHHPRVAG*GDVLPGQEPPPLRT Trigger: GGTCCGGAGCGGTGGAGGCTCCTGGCCGGGGAGCACGTCGCCCCACCCGGCAACGCGAGGATGGTGGCGGCGCAGTCGGCTGCTTTGGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS CCA 90 bp | GGCCCTATGTCGCCGCTCTCGCCCGCCGCCGCCGCGGAGTGGGAGTaGGGAGGAGGGGAACAGTCCTTGGAGCCGGCCCCGGGAGTACTC | + |
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Preference number: 5 (lower is better) Translates to: GPMSPLSPAAAAEWE*GGGEQSLEPAPGVL Trigger: GAGTACTCCCGGGGCCGGCTCCAAGGACTGTTCCCCTCCTCCCCACTCCCACTCCGCGGCGGCGGCGGGCGAGAGCGGCGACATAGGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS GCA 90 bp | AGGGGCGGGCAGCGGCGGCGGAGCAGCTGCGGGAGCCGCAGTGGCTaGTGTGGGACATCTGTGCCTCGCGTCCCCTGTGCCTTGAGACCC | + |
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Preference number: 5 (lower is better) Translates to: RGGQRRRSSCGSRSG*CGTSVPRVPCALRP Trigger: GGGTCTCAAGGCACAGGGGACGCGAGGCACAGATGTCCCACAGCAGCCACTGCGGCTCCCGCAGCTGCTCCGCCGCCGCTGCCCGCCCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS CCA 90 bp | GGCGGAGCTGGGTCCGGGGCGGAGCGGTGTTCGCACACAAAGCGCTaGGGCTGGACCCAGGGTTCGGGGCCAAGGCGAGAAGTGGGAGCG | + |
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Preference number: 5 (lower is better) Translates to: GGAGSGAERCSHTKR*GWTQGSGPRREVGA Trigger: CGCTCCCACTTCTCGCCTTGGCCCCGAACCCTGGGTCCAGCCCCAGCGCTTTGTGTGCGAACACCGCTCCGCCCCGGACCCAGCTCCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS GCA 90 bp | GAGCCGCAGTGGCTGCTGTGGGACATCTGTGCCTCGCGTCCCCTGTaGCTTGAGACCCCAAAGCAGCCGACTGCGCCGCCACCATCCTCG | + |
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Preference number: 5 (lower is better) Translates to: EPQWLLWDICASRPL*LETPKQPTAPPPSS Trigger: CGAGGATGGTGGCGGCGCAGTCGGCTGCTTTGGGGTCTCAAGGCACAGGGGACGCGAGGCACAGATGTCCCACAGCAGCCACTGCGGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS GCA 90 bp | TTCCAAATGGCCTTCCTAATGACTGCTCTTCTCGTACCACGTGCTTaGCTGGTGATGAGATCCCCTAGAAGGACTGTTCACCTGGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: FQMAFLMTALLVPRA*LVMRSPRRTVHLGL Trigger: CAGACCCAGGTGAACAGTCCTTCTAGGGGATCTCATCACCAGGCAAGCACGTGGTACGAGAAGAGCAGTCATTAGGAAGGCCATTTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS TCA 90 bp | GCTATGTGGAGAGGCTTTGACCTATTTAAGGACTGCAAACCATACTaGATCAGGGCCTGCGTGATCACAAAAATGTCAGCTCACTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: AMWRGFDLFKDCKPY*IRACVITKMSAHWG Trigger: TCCCCAGTGAGCTGACATTTTTGTGATCACGCAGGCCCTGATTCAGTATGGTTTGCAGTCCTTAAATAGGTCAAAGCCTCTCCACATAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000675544.1 |
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| CDS TCA 90 bp | GGACAGCAGCAGGGCTTTGCTAAAGGAGACCAAACTGGTTATGGCTaGGAATGGAATCCATCAGATATCTACCCTAATCACAGGGTAATT | + |
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Preference number: 5 (lower is better) Translates to: GQQQGFAKGDQTGYG*EWNPSDIYPNHRVI Trigger: AATTACCCTGTGATTAGGGTAGATATCTGATGGATTCCATTCTCAGCCATAACCAGTTTGGTCTCCTTTAGCAAAGCCCTGCTGCTGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675544.1 |
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| CDS TCA 90 bp | TTGAGGTTTGGCCTCCACTTCCACCCTTGTTGCTACTATCTCAAGTaGAATAACTCAGAAACAGGAGGTCAAATACTTCACATTCTCACT | + |
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Preference number: 5 (lower is better) Translates to: LRFGLHFHPCCYYLK*NNSETGGQILHILT Trigger: AGTGAGAATGTGAAGTATTTGACCTCCTGTTTCTGAGTTATTTCACTTGAGATAGTAGCAACAAGGGTGGAAGTGGAGGCCAAACCTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675544.1 |
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| CDS TCA 90 bp | TTGACCTATTTAAGGACTGCAAACCATACTGAATCAGGGCCTGCGTaGTCACAAAAATGTCAGCTCACTGGGGAAATATATAGACATGGT | + |
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Preference number: 5 (lower is better) Translates to: LTYLRTANHTESGPA*SQKCQLTGEIYRHG Trigger: ACCATGTCTATATATTTCCCCAGTGAGCTGACATTTTTGTGATCACGCAGGCCCTGATTCAGTATGGTTTGCAGTCCTTAAATAGGTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000675544.1 |
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| CDS TCA 90 bp | AACAAGATGTACAAGGGTTTACCACACTTTTATTGCTTTAAGAATTaGGGTTTGGCCTCCACTTCCACCCTTGTTGCTACTATCTCAAGT | + |
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Preference number: 5 (lower is better) Translates to: NKMYKGLPHFYCFKN*GLASTSTLVATISS Trigger: ACTTGAGATAGTAGCAACAAGGGTGGAAGTGGAGGCCAAACCTCAATTCTTAAAGCAATAAAAGTGTGGTAAACCCTTGTACATCTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675544.1 |
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| CDS CCA 90 bp | CAACCCTTGGAAACACTTCCTATCCTTGATTACCAACTTTCAACATaGCTTCTGGATGATGAAGCTTATTTATGGAAAAGAATGTTTATC | + |
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Preference number: 5 (lower is better) Translates to: QPLETLPILDYQLST*LLDDEAYLWKRMFI Trigger: GATAAACATTCTTTTCCATAAATAAGCTTCATCATCCAGAAGCCATGTTGAAAGTTGGTAATCAAGGATAGGAAGTGTTTCCAAGGGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS CCA 72 bp | TGCTCCCCGGCCAGGAGCCTCCACCGCTCCGGACCCTaGCCCTATGTCGCCGCTCTCGCCCGCCGCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: CSPARSLHRSGP*PYVAALARRRR Trigger: GCGGCGGCGGCGGGCGAGAGCGGCGACATAGGGCCAGGGTCCGGAGCGGTGGAGGCTCCTGGCCGGGGAGCA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS GCA 72 bp | GCCGCCACCATCCTCGCGTTGCCGGGTGGGGCGACGTaGTCCCCGGCCAGGAGCCTCCACCGCTCCGGACCC | + |
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Preference number: 6 (lower is better) Translates to: AATILALPGGAT*SPARSLHRSGP Trigger: GGGTCCGGAGCGGTGGAGGCTCCTGGCCGGGGAGCACGTCGCCCCACCCGGCAACGCGAGGATGGTGGCGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS CCA 72 bp | AGCCGGCCCCGGGAGTACTCCCGGAGCCTGCCGCCCTaGAAGCCGCCACGATGGACCGGGCTGAGTCGCCCG | + |
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Preference number: 6 (lower is better) Translates to: SRPREYSRSLPP*KPPRWTGLSRP Trigger: CGGGCGACTCAGCCCGGTCCATCGTGGCGGCTTCCAGGGCGGCAGGCTCCGGGAGTACTCCCGGGGCCGGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS CCA 72 bp | AGCCGACTGCGCCGCCACCATCCTCGCGTTGCCGGGTaGGGCGACGTGCTCCCCGGCCAGGAGCCTCCACCG | + |
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Preference number: 6 (lower is better) Translates to: SRLRRHHPRVAG*GDVLPGQEPPP Trigger: CGGTGGAGGCTCCTGGCCGGGGAGCACGTCGCCCCACCCGGCAACGCGAGGATGGTGGCGGCGCAGTCGGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS CAA 72 bp | TGCTGTGGGACATCTGTGCCTCGCGTCCCCTGTGCCTaGAGACCCCAAAGCAGCCGACTGCGCCGCCACCAT | + |
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Preference number: 6 (lower is better) Translates to: CCGTSVPRVPCA*RPQSSRLRRHH Trigger: ATGGTGGCGGCGCAGTCGGCTGCTTTGGGGTCTCAAGGCACAGGGGACGCGAGGCACAGATGTCCCACAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS TCA 72 bp | TCCATACCTACTGGCCTCCCCCAACCCTCTTGTCTGTaGCACTCCAAATCCCAGGAAGCTTGCGATGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: SIPTGLPQPSCL*HSKSQEACDEE Trigger: TTCCTCATCGCAAGCTTCCTGGGATTTGGAGTGTCACAGACAAGAGGGTTGGGGGAGGCCAGTAGGTATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS GCA 72 bp | GCCTTCCTAATGACTGCTCTTCTCGTACCACGTGCTTaGCTGGTGATGAGATCCCCTAGAAGGACTGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: AFLMTALLVPRA*LVMRSPRRTVH Trigger: GTGAACAGTCCTTCTAGGGGATCTCATCACCAGGCAAGCACGTGGTACGAGAAGAGCAGTCATTAGGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS CAA 90 bp | CTTGAGAATGGGAGCTTCAACGGGACAGGGCTATGTGGAGAGGCTTaGACCTATTTAAGGACTGCAAACCATACTGAATCAGGGCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: LENGSFNGTGLCGEA*TYLRTANHTESGPA Trigger: CGCAGGCCCTGATTCAGTATGGTTTGCAGTCCTTAAATAGGTCAAAGCCTCTCCACATAGCCCTGTCCCGTTGAAGCTCCCATTCTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675544.1 |
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| CDS CAA 72 bp | AAACAAATCCATACCTACTGGCCTCCCCCAACCCTCTaGTCTGTGACACTCCAAATCCCAGGAAGCTTGCGA | + |
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Preference number: 6 (lower is better) Translates to: KQIHTYWPPPTL*SVTLQIPGSLR Trigger: TCGCAAGCTTCCTGGGATTTGGAGTGTCACAGACAAGAGGGTTGGGGGAGGCCAGTAGGTATGGATTTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS GCA 72 bp | AGAGGATGTGCTTTTCCAAATGGCCTTCCTAATGACTaGTCTTCTCGTACCACGTGCTTGCCTGGTGATGAG | + |
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Preference number: 6 (lower is better) Translates to: RGCAFPNGLPND*SSRTTCLPGDE Trigger: CTCATCACCAGGCAAGCACGTGGTACGAGAAGAGCAGTCATTAGGAAGGCCATTTGGAAAAGCACATCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS CAA 72 bp | GGGAGCTTCAACGGGACAGGGCTATGTGGAGAGGCTTaGACCTATTTAAGGACTGCAAACCATACTGAATCA | + |
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Preference number: 6 (lower is better) Translates to: GSFNGTGLCGEA*TYLRTANHTES Trigger: TGATTCAGTATGGTTTGCAGTCCTTAAATAGGTCAAAGCCTCTCCACATAGCCCTGTCCCGTTGAAGCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675544.1 |
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| CDS CAA 72 bp | TTCATTGTGCTCCCTAATGGCTCACATAGGGAGCAGTaGGAGGGTGATGTGGATTTTAGAGTAGGAACCTCA | + |
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Preference number: 6 (lower is better) Translates to: FIVLPNGSHREQ*EGDVDFRVGTS Trigger: TGAGGTTCCTACTCTAAAATCCACATCACCCTCCAACTGCTCCCTATGTGAGCCATTAGGGAGCACAATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS TCA 72 bp | GGCCTCCACTTCCACCCTTGTTGCTACTATCTCAAGTaGAATAACTCAGAAACAGGAGGTCAAATACTTCAC | + |
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Preference number: 6 (lower is better) Translates to: GLHFHPCCYYLK*NNSETGGQILH Trigger: GTGAAGTATTTGACCTCCTGTTTCTGAGTTATTTCACTTGAGATAGTAGCAACAAGGGTGGAAGTGGAGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675544.1 |
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| CDS TCA 72 bp | AGAGGCTTTGACCTATTTAAGGACTGCAAACCATACTaGATCAGGGCCTGCGTGATCACAAAAATGTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RGFDLFKDCKPY*IRACVITKMSA Trigger: AGCTGACATTTTTGTGATCACGCAGGCCCTGATTCAGTATGGTTTGCAGTCCTTAAATAGGTCAAAGCCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000675544.1 |
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| CDS TCA 72 bp | CAGGGCTTTGCTAAAGGAGACCAAACTGGTTATGGCTaGGAATGGAATCCATCAGATATCTACCCTAATCAC | + |
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Preference number: 6 (lower is better) Translates to: QGFAKGDQTGYG*EWNPSDIYPNH Trigger: GTGATTAGGGTAGATATCTGATGGATTCCATTCTCAGCCATAACCAGTTTGGTCTCCTTTAGCAAAGCCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675544.1 |
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| CDS CAA 72 bp | CGTACATCAGGGGCTGTTCTTTTGCTGCAAATGAAGTaGATGGAATTACACTGTGATACGACTGACTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: RTSGAVLLLQMK*MELHCDTTDCE Trigger: CTCACAGTCAGTCGTATCACAGTGTAATTCCATCAACTTCATTTGCAGCAAAAGAACAGCCCCTGATGTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS TCA 72 bp | TTAAGGACTGCAAACCATACTGAATCAGGGCCTGCGTaGTCACAAAAATGTCAGCTCACTGGGGAAATATAT | + |
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Preference number: 6 (lower is better) Translates to: LRTANHTESGPA*SQKCQLTGEIY Trigger: ATATATTTCCCCAGTGAGCTGACATTTTTGTGATCACGCAGGCCCTGATTCAGTATGGTTTGCAGTCCTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000675544.1 |
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| CDS TCA 72 bp | GGTGATGTGGATTTTAGAGTAGGAACCTCAGGAACTTaGGCAGAGGCTCCCAAAAGTAGATTAGAAGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: GDVDFRVGTSGT*AEAPKSRLEVY Trigger: ATAAACTTCTAATCTACTTTTGGGAGCCTCTGCTCAAGTTCCTGAGGTTCCTACTCTAAAATCCACATCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS CAA 72 bp | TATTCAGGAAACAGGCGTACATCAGGGGCTGTTCTTTaGCTGCAAATGAAGTTGATGGAATTACACTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: YSGNRRTSGAVL*LQMKLMELHCD Trigger: ATCACAGTGTAATTCCATCAACTTCATTTGCAGCAAAAGAACAGCCCCTGATGTACGCCTGTTTCCTGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS CAA 90 bp | ATTTCCAAATATTCAGGAAACAGGCGTACATCAGGGGCTGTTCTTTaGCTGCAAATGAAGTTGATGGAATTACACTGTGATACGACTGAC | + |
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Preference number: 6 (lower is better) Translates to: ISKYSGNRRTSGAVL*LQMKLMELHCDTTD Trigger: GTCAGTCGTATCACAGTGTAATTCCATCAACTTCATTTGCAGCAAAAGAACAGCCCCTGATGTACGCCTGTTTCCTGAATATTTGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS CCA 72 bp | GTTTACCACACTTTTATTGCTTTAAGAATTGAGGTTTaGCCTCCACTTCCACCCTTGTTGCTACTATCTCAA | + |
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Preference number: 6 (lower is better) Translates to: VYHTFIALRIEV*PPLPPLLLLSQ Trigger: TTGAGATAGTAGCAACAAGGGTGGAAGTGGAGGCCAAACCTCAATTCTTAAAGCAATAAAAGTGTGGTAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675544.1 |
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| CDS CAA 72 bp | TTAATCACTGACAACCCTTGGAAACACTTCCTATCCTaGATTACCAACTTTCAACATGGCTTCTGGATGATG | + |
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Preference number: 6 (lower is better) Translates to: LITDNPWKHFLS*ITNFQHGFWMM Trigger: CATCATCCAGAAGCCATGTTGAAAGTTGGTAATCAAGGATAGGAAGTGTTTCCAAGGGTTGTCAGTGATTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS CAA 90 bp | AAGGTTGATTTAATCACTGACAACCCTTGGAAACACTTCCTATCCTaGATTACCAACTTTCAACATGGCTTCTGGATGATGAAGCTTATT | + |
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Preference number: 6 (lower is better) Translates to: KVDLITDNPWKHFLS*ITNFQHGFWMMKLI Trigger: AATAAGCTTCATCATCCAGAAGCCATGTTGAAAGTTGGTAATCAAGGATAGGAAGTGTTTCCAAGGGTTGTCAGTGATTAAATCAACCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS CCA 72 bp | GAAACACTTCCTATCCTTGATTACCAACTTTCAACATaGCTTCTGGATGATGAAGCTTATTTATGGAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: ETLPILDYQLST*LLDDEAYLWKR Trigger: TCTTTTCCATAAATAAGCTTCATCATCCAGAAGCCATGTTGAAAGTTGGTAATCAAGGATAGGAAGTGTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538094.2 ENST00000675544.1 |
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| CDS GCA 72 bp | TGTTCCTCTCCAAAGCTGTATAGTTCTGCGTTACCTTaGAGTATGATAAATCTGATATCAACTAATAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: CSSPKLYSSALP*SMINLISTNKR Trigger: TCTTTTATTAGTTGATATCAGATTTATCATACTGCAAGGTAACGCAGAACTATACAGCTTTGGAGAGGAACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675544.1 |
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