Pregenerated sensors for LINC00609 (Homo sapiens)
Ensembl gene IDs: ENSG00000257585Ensembl transcript IDs: ENST00000546508.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGGTCCTGGAGACTCTGCGCCGCAGGGCAGAGATGCTTGTCCAATaGGGCCGGCACAGGAGCTCCTTGGAGAGCAGCAAACCAGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LVLETLRRRAEMLVQ*GRHRSSLESSKPAK Trigger: TTTGGCTGGTTTGCTGCTCTCCAAGGAGCTCCTGTGCCGGCCGCATTGGACAAGCATCTCTGCCCTGCGGCGCAGAGTCTCCAGGACCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS GCA 90 bp | ATGTGTGGACTGTGCAAGTCCGCCATCTGCTGGTCCTGGAGACTCTaGGCCGCAGGGCAGAGATGCTTGTCCAATGCGGCCGGCACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: MCGLCKSAICWSWRL*AAGQRCLSNAAGTG Trigger: TCCTGTGCCGGCCGCATTGGACAAGCATCTCTGCCCTGCGGCGCAGAGTCTCCAGGACCAGCAGATGGCGGACTTGCACAGTCCACACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS CCA 90 bp | GCAGGGCAGAGATGCTTGTCCAATGCGGCCGGCACAGGAGCTCCTTaGAGAGCAGCAAACCAGCCAAAGCTGTTCCCACCACCTCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AGQRCLSNAAGTGAP*RAANQPKLFPPPQV Trigger: GACCTGAGGTGGTGGGAACAGCTTTGGCTGGTTTGCTGCTCTCCAAGGAGCTCCTGTGCCGGCCGCATTGGACAAGCATCTCTGCCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS CCA 90 bp | ACCTGGAAAATGTGTGGACTGTGCAAGTCCGCCATCTGCTGGTCCTaGAGACTCTGCGCCGCAGGGCAGAGATGCTTGTCCAATGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TWKMCGLCKSAICWS*RLCAAGQRCLSNAA Trigger: GGCCGCATTGGACAAGCATCTCTGCCCTGCGGCGCAGAGTCTCCAGGACCAGCAGATGGCGGACTTGCACAGTCCACACATTTTCCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS GCA 90 bp | CACTTGAGAACCTGGAAAATGTGTGGACTGTGCAAGTCCGCCATCTaGTGGTCCTGGAGACTCTGCGCCGCAGGGCAGAGATGCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HLRTWKMCGLCKSAI*WSWRLCAAGQRCLS Trigger: GGACAAGCATCTCTGCCCTGCGGCGCAGAGTCTCCAGGACCAGCAGATGGCGGACTTGCACAGTCCACACATTTTCCAGGTTCTCAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS GCA 90 bp | CATCCAGGAAGCGAACACTTGAGAACCTGGAAAATGTGTGGACTGTaGAAGTCCGCCATCTGCTGGTCCTGGAGACTCTGCGCCGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HPGSEHLRTWKMCGL*KSAICWSWRLCAAG Trigger: CCCTGCGGCGCAGAGTCTCCAGGACCAGCAGATGGCGGACTTGCACAGTCCACACATTTTCCAGGTTCTCAAGTGTTCGCTTCCTGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS CCA 90 bp | TTGAGAACCTGGAAAATGTGTGGACTGTGCAAGTCCGCCATCTGCTaGTCCTGGAGACTCTGCGCCGCAGGGCAGAGATGCTTGTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LRTWKMCGLCKSAIC*SWRLCAAGQRCLSN Trigger: ATTGGACAAGCATCTCTGCCCTGCGGCGCAGAGTCTCCAGGACCAGCAGATGGCGGACTTGCACAGTCCACACATTTTCCAGGTTCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS CCA 90 bp | TCTATCTACTGCTCACACCTCCACTTCCAGTCTTCTGACTGCACGTaGGGAGAGGGCAAAAATGACTTGAGATGGGCGAGATGGGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SIYCSHLHFQSSDCT*GEGKNDLRWARWAE Trigger: CTCGGCCCATCTCGCCCATCTCAAGTCATTTTTGCCCTCTCCCCACGTGCAGTCAGAAGACTGGAAGTGGAGGTGTGAGCAGTAGATAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS GCA 90 bp | AACTGCTCTATCTACTGCTCACACCTCCACTTCCAGTCTTCTGACTaGACGTGGGGAGAGGGCAAAAATGACTTGAGATGGGCGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: NCSIYCSHLHFQSSD*TWGEGKNDLRWARW Trigger: CCATCTCGCCCATCTCAAGTCATTTTTGCCCTCTCCCCACGTGCAGTCAGAAGACTGGAAGTGGAGGTGTGAGCAGTAGATAGAGCAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS TCA 90 bp | ACTTCCAGTCTTCTGACTGCACGTGGGGAGAGGGCAAAAATGACTTaGGATGGGCGAGATGGGCCGAGAATGATGGGATCCTATTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: TSSLLTARGERAKMT*DGRDGPRMMGSYFI Trigger: AATGAAATAGGATCCCATCATTCTCGGCCCATCTCGCCCATCTCAAGTCATTTTTGCCCTCTCCCCACGTGCAGTCAGAAGACTGGAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS TCA 90 bp | AATGATGGGATCCTATTTCATTCTATCCATATGGCTTCTAAGTCTTaGGAGTACAGGTGGAAACTGTCCGTAGCAAATTGTTCCTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: NDGILFHSIHMASKS*EYRWKLSVANCSCH Trigger: ATGACAGGAACAATTTGCTACGGACAGTTTCCACCTGTACTCTCAAGACTTAGAAGCCATATGGATAGAATGAAATAGGATCCCATCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS CAA 72 bp | TGGTCCTGGAGACTCTGCGCCGCAGGGCAGAGATGCTaGTCCAATGCGGCCGGCACAGGAGCTCCTTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: WSWRLCAAGQRC*SNAAGTGAPWR Trigger: TCTCCAAGGAGCTCCTGTGCCGGCCGCATTGGACAAGCATCTCTGCCCTGCGGCGCAGAGTCTCCAGGACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS CAA 90 bp | GCCATCTGCTGGTCCTGGAGACTCTGCGCCGCAGGGCAGAGATGCTaGTCCAATGCGGCCGGCACAGGAGCTCCTTGGAGAGCAGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: AICWSWRLCAAGQRC*SNAAGTGAPWRAAN Trigger: GTTTGCTGCTCTCCAAGGAGCTCCTGTGCCGGCCGCATTGGACAAGCATCTCTGCCCTGCGGCGCAGAGTCTCCAGGACCAGCAGATGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS GCA 72 bp | GAGACTCTGCGCCGCAGGGCAGAGATGCTTGTCCAATaGGGCCGGCACAGGAGCTCCTTGGAGAGCAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: ETLRRRAEMLVQ*GRHRSSLESSK Trigger: TTTGCTGCTCTCCAAGGAGCTCCTGTGCCGGCCGCATTGGACAAGCATCTCTGCCCTGCGGCGCAGAGTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS CCA 72 bp | ATGTGTGGACTGTGCAAGTCCGCCATCTGCTGGTCCTaGAGACTCTGCGCCGCAGGGCAGAGATGCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: MCGLCKSAICWS*RLCAAGQRCLS Trigger: GGACAAGCATCTCTGCCCTGCGGCGCAGAGTCTCCAGGACCAGCAGATGGCGGACTTGCACAGTCCACACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS GCA 72 bp | ACCTGGAAAATGTGTGGACTGTGCAAGTCCGCCATCTaGTGGTCCTGGAGACTCTGCGCCGCAGGGCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: TWKMCGLCKSAI*WSWRLCAAGQR Trigger: TCTCTGCCCTGCGGCGCAGAGTCTCCAGGACCAGCAGATGGCGGACTTGCACAGTCCACACATTTTCCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS CCA 72 bp | TGGAAAATGTGTGGACTGTGCAAGTCCGCCATCTGCTaGTCCTGGAGACTCTGCGCCGCAGGGCAGAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: WKMCGLCKSAIC*SWRLCAAGQRC Trigger: GCATCTCTGCCCTGCGGCGCAGAGTCTCCAGGACCAGCAGATGGCGGACTTGCACAGTCCACACATTTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS CCA 72 bp | AGATGCTTGTCCAATGCGGCCGGCACAGGAGCTCCTTaGAGAGCAGCAAACCAGCCAAAGCTGTTCCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: RCLSNAAGTGAP*RAANQPKLFPP Trigger: TGGTGGGAACAGCTTTGGCTGGTTTGCTGCTCTCCAAGGAGCTCCTGTGCCGGCCGCATTGGACAAGCATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS TCA 72 bp | CTTCTGACTGCACGTGGGGAGAGGGCAAAAATGACTTaGGATGGGCGAGATGGGCCGAGAATGATGGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: LLTARGERAKMT*DGRDGPRMMGS Trigger: GGATCCCATCATTCTCGGCCCATCTCGCCCATCTCAAGTCATTTTTGCCCTCTCCCCACGTGCAGTCAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS GCA 72 bp | AGCGAACACTTGAGAACCTGGAAAATGTGTGGACTGTaGAAGTCCGCCATCTGCTGGTCCTGGAGACTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SEHLRTWKMCGL*KSAICWSWRLC Trigger: GCAGAGTCTCCAGGACCAGCAGATGGCGGACTTGCACAGTCCACACATTTTCCAGGTTCTCAAGTGTTCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS CCA 72 bp | TGCTCACACCTCCACTTCCAGTCTTCTGACTGCACGTaGGGAGAGGGCAAAAATGACTTGAGATGGGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: CSHLHFQSSDCT*GEGKNDLRWAR Trigger: TCTCGCCCATCTCAAGTCATTTTTGCCCTCTCCCCACGTGCAGTCAGAAGACTGGAAGTGGAGGTGTGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS CCA 72 bp | GACTGCACGTGGGGAGAGGGCAAAAATGACTTGAGATaGGCGAGATGGGCCGAGAATGATGGGATCCTATTT | + |
|
Preference number: 6 (lower is better) Translates to: DCTWGEGKNDLR*ARWAENDGILF Trigger: AAATAGGATCCCATCATTCTCGGCCCATCTCGCCCATCTCAAGTCATTTTTGCCCTCTCCCCACGTGCAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS CCA 72 bp | TGGGGAGAGGGCAAAAATGACTTGAGATGGGCGAGATaGGCCGAGAATGATGGGATCCTATTTCATTCTATC | + |
|
Preference number: 6 (lower is better) Translates to: WGEGKNDLRWAR*AENDGILFHSI Trigger: GATAGAATGAAATAGGATCCCATCATTCTCGGCCCATCTCGCCCATCTCAAGTCATTTTTGCCCTCTCCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS CAA 72 bp | CACAGTGAACATGTTGCTTTCCCAAAGGGAGGTGATTaGTTTGAGAGGGTATGTGTGTGGTCTTTAAATAGT | + |
|
Preference number: 6 (lower is better) Translates to: HSEHVAFPKGGD*FERVCVWSLNS Trigger: ACTATTTAAAGACCACACACATACCCTCTCAAACAAATCACCTCCCTTTGGGAAAGCAACATGTTCACTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||
| CDS TCA 72 bp | ATCCTATTTCATTCTATCCATATGGCTTCTAAGTCTTaGGAGTACAGGTGGAAACTGTCCGTAGCAAATTGT | + |
|
Preference number: 6 (lower is better) Translates to: ILFHSIHMASKS*EYRWKLSVANC Trigger: ACAATTTGCTACGGACAGTTTCCACCTGTACTCTCAAGACTTAGAAGCCATATGGATAGAATGAAATAGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546508.1 |
||