Pregenerated sensors for LINC00606 (Homo sapiens)
Ensembl gene IDs: ENSG00000226567Ensembl transcript IDs: ENST00000412578.1, ENST00000436060.2, ENST00000664856.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGGCTCTAGCCCCTTCCCGGAGAGTGCTGTCAGGCTCAGGGCCCTaGATTCCAGTCCCGACGGGCCACTTCCTGGCTCAGAGACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GALAPSRRVLSGSGP*IPVPTGHFLAQRPP Trigger: TGGAGGTCTCTGAGCCAGGAAGTGGCCCGTCGGGACTGGAATGCAGGGCCCTGAGCCTGACAGCACTCTCCGGGAAGGGGCTAGAGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412578.1 |
||
| CDS CCA 90 bp | CTACAGGTGACGGGGAAGAAGGCGAGCCAGGCAGGTGAGACGGTGTaGAGAGGATGGGGGCTGGTGAGCCAGTGTGTGTCCCAGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LQVTGKKASQAGETV*RGWGLVSQCVSQQV Trigger: CACCTGCTGGGACACACACTGGCTCACCAGCCCCCATCCTCTCCACACCGTCTCACCTGCCTGGCTCGCCTTCTTCCCCGTCACCTGTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS CCA 90 bp | ACGGGGAAGAAGGCGAGCCAGGCAGGTGAGACGGTGTGGAGAGGATaGGGGCTGGTGAGCCAGTGTGTGTCCCAGCAGGTGAGTGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TGKKASQAGETVWRG*GLVSQCVSQQVSGR Trigger: TCTTCCACTCACCTGCTGGGACACACACTGGCTCACCAGCCCCCATCCTCTCCACACCGTCTCACCTGCCTGGCTCGCCTTCTTCCCCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS GCA 90 bp | CCTGCAAAGAGCCCCAGCTCTGCTGTTGGCGCAGCCCTCTCCAGCTaGACGGCTCAGGGGAGCTACTGCTCTCAGAGCTTCAGTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PAKSPSSAVGAALSS*TAQGSYCSQSFSFL Trigger: GAGGAAACTGAAGCTCTGAGAGCAGTAGCTCCCCTGAGCCGTGCAGCTGGAGAGGGCTGCGCCAACAGCAGAGCTGGGGCTCTTTGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436060.2 |
||
| CDS GCA 90 bp | ACTGCAAAGAGCCCCAGCTCTGCTGTTGGCGCAGCCCTCTCCAGCTaGACGGCTCAGGGGAGCTACTGCTCTCAGAGCTTCAGTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TAKSPSSAVGAALSS*TAQGSYCSQSFSFL Trigger: GAGGAAACTGAAGCTCTGAGAGCAGTAGCTCCCCTGAGCCGTGCAGCTGGAGAGGGCTGCGCCAACAGCAGAGCTGGGGCTCTTTGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664856.1 |
||
| CDS CCA 90 bp | GAGAGGATGGGGGCTGGTGAGCCAGTGTGTGTCCCAGCAGGTGAGTaGAAGAACACAGCCACTTGTGAGAAGCTGAGGGGCAGAGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: ERMGAGEPVCVPAGE*KNTATCEKLRGRDP Trigger: TGGGTCTCTGCCCCTCAGCTTCTCACAAGTGGCTGTGTTCTTCCACTCACCTGCTGGGACACACACTGGCTCACCAGCCCCCATCCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS CCA 90 bp | GGGACTGTTTCTGCTCCAGGATGTCCAGTCCCTCTAGAAGCAGCTTaGAGTGGTCTGGGAGCGGGGGACACTCGTGGCTGCTCCTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GTVSAPGCPVPLEAA*SGLGAGDTRGCSFV Trigger: TACAAAGGAGCAGCCACGAGTGTCCCCCGCTCCCAGACCACTCCAAGCTGCTTCTAGAGGGACTGGACATCCTGGAGCAGAAACAGTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412578.1 |
||
| CDS GCA 90 bp | TGGCAGCAGCGTTCATCCACGCTTCAGGAAGTCGGTGAGGCTGGGTaGTTCAGGGGATGGCCAGATTTAGCGATGCCTCATATCCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: WQQRSSTLQEVGEAG*FRGWPDLAMPHILG Trigger: TCCGAGGATATGAGGCATCGCTAAATCTGGCCATCCCCTGAAGCACCCAGCCTCACCGACTTCCTGAAGCGTGGATGAACGCTGCTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412578.1 ENST00000436060.2 ENST00000664856.1 |
||
| CDS CCA 90 bp | TGTTTCTGCTCCAGGATGTCCAGTCCCTCTAGAAGCAGCTTGGAGTaGTCTGGGAGCGGGGGACACTCGTGGCTGCTCCTTTGTAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CFCSRMSSPSRSSLE*SGSGGHSWLLLCSS Trigger: ACTGCTACAAAGGAGCAGCCACGAGTGTCCCCCGCTCCCAGACCACTCCAAGCTGCTTCTAGAGGGACTGGACATCCTGGAGCAGAAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412578.1 |
||
| CDS TCA 90 bp | AGCACATTTGTGGCAGCAGCGTTCATCCACGCTTCAGGAAGTCGGTaGGGCTGGGTGCTTCAGGGGATGGCCAGATTTAGCGATGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: STFVAAAFIHASGSR*GWVLQGMARFSDAS Trigger: TGAGGCATCGCTAAATCTGGCCATCCCCTGAAGCACCCAGCCTCACCGACTTCCTGAAGCGTGGATGAACGCTGCTGCCACAAATGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412578.1 ENST00000436060.2 ENST00000664856.1 |
||
| CDS GCA 90 bp | GAGAGCACATGGGACCCTGGAGAGAAGGGAGTGACGGCCTCACCATaGCAACTAGTCAGAGTAGGGCAGGTATGTCTGGGAAATGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: ESTWDPGEKGVTASP*QLVRVGQVCLGNDL Trigger: CAGGTCATTTCCCAGACATACCTGCCCTACTCTGACTAGTTGGCATGGTGAGGCCGTCACTCCCTTCTCTCCAGGGTCCCATGTGCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS CCA 90 bp | CCCTCTAGAAGCAGCTTGGAGTGGTCTGGGAGCGGGGGACACTCGTaGCTGCTCCTTTGTAGCAGTTCTAGAACTTGCAAGCATGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: PSRSSLEWSGSGGHS*LLLCSSSRTCKHGT Trigger: TGTCCCATGCTTGCAAGTTCTAGAACTGCTACAAAGGAGCAGCCACGAGTGTCCCCCGCTCCCAGACCACTCCAAGCTGCTTCTAGAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412578.1 |
||
| CDS GCA 90 bp | CTAGAAGCAGCTTGGAGTGGTCTGGGAGCGGGGGACACTCGTGGCTaGTCCTTTGTAGCAGTTCTAGAACTTGCAAGCATGGGACAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LEAAWSGLGAGDTRG*SFVAVLELASMGQR Trigger: TCTTTGTCCCATGCTTGCAAGTTCTAGAACTGCTACAAAGGAGCAGCCACGAGTGTCCCCCGCTCCCAGACCACTCCAAGCTGCTTCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412578.1 |
||
| CDS CCA 90 bp | AAACATCACTCACTCTCCTTGTCAGCGGTTGTCACAGCACATTTGTaGCAGCAGCGTTCATCCACGCTTCAGGAAGTCGGTGAGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KHHSLSLSAVVTAHL*QQRSSTLQEVGEAG Trigger: CCCAGCCTCACCGACTTCCTGAAGCGTGGATGAACGCTGCTGCCACAAATGTGCTGTGACAACCGCTGACAAGGAGAGTGAGTGATGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412578.1 ENST00000436060.2 ENST00000664856.1 |
||
| CDS CCA 90 bp | AAGAAATGTCTGGGTGAATTTGTGCCTGGAGAGCACATGGGACCCTaGAGAGAAGGGAGTGACGGCCTCACCATGCCAACTAGTCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KKCLGEFVPGEHMGP*REGSDGLTMPTSQS Trigger: ACTCTGACTAGTTGGCATGGTGAGGCCGTCACTCCCTTCTCTCCAGGGTCCCATGTGCTCTCCAGGCACAAATTCACCCAGACATTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS GCA 90 bp | AGCGGGGGACACTCGTGGCTGCTCCTTTGTAGCAGTTCTAGAACTTaGAAGCATGGGACAAAGATGATCATGATCATTTCGCTCATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGGHSWLLLCSSSRT*KHGTKMIMIISLIP Trigger: AGGGATGAGCGAAATGATCATGATCATCTTTGTCCCATGCTTGCAAGTTCTAGAACTGCTACAAAGGAGCAGCCACGAGTGTCCCCCGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412578.1 |
||
| CDS GCA 90 bp | GGGTCTAAGAAGGAGGCTTCATTCAGTTTAGCAGCCAAAGGGAAGTaGAAGGTCAGAAAGCTCTGTCATGCATCCCCCAGAATCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GSKKEASFSLAAKGK*KVRKLCHASPRISS Trigger: ACTGCTGATTCTGGGGGATGCATGACAGAGCTTTCTGACCTTGCACTTCCCTTTGGCTGCTAAACTGAATGAAGCCTCCTTCTTAGACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000412578.1 ENST00000436060.2 ENST00000664856.1 |
||
| CDS CCA 90 bp | TGCAAAGGTAACGCTTTCTGGGACAGAGCTAGATCAAGAAATGTCTaGGTGAATTTGTGCCTGGAGAGCACATGGGACCCTGGAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CKGNAFWDRARSRNV*VNLCLESTWDPGEK Trigger: CTTCTCTCCAGGGTCCCATGTGCTCTCCAGGCACAAATTCACCCAGACATTTCTTGATCTAGCTCTGTCCCAGAAAGCGTTACCTTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS CCA 90 bp | TTAAATGAAATAATATGTGACAGTGCCTGGGGCACAACAGACACATaGGTTAAGCAGTCAGCCTGCCTCAGTGGAGTTCCCACTCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: LNEIICDSAWGTTDT*VKQSACLSGVPTPL Trigger: TAGTGGAGTGGGAACTCCACTGAGGCAGGCTGACTGCTTAACCCATGTGTCTGTTGTGCCCCAGGCACTGTCACATATTATTTCATTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS CCA 72 bp | CAGGGCCCTGCATTCCAGTCCCGACGGGCCACTTCCTaGCTCAGAGACCTCCAGCACCACTCTGGGCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QGPAFQSRRATS*LRDLQHHSGPQ Trigger: CTGAGGCCCAGAGTGGTGCTGGAGGTCTCTGAGCCAGGAAGTGGCCCGTCGGGACTGGAATGCAGGGCCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412578.1 |
||
| CDS GCA 72 bp | AGCCCCAGCTCTGCTGTTGGCGCAGCCCTCTCCAGCTaGACGGCTCAGGGGAGCTACTGCTCTCAGAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SPSSAVGAALSS*TAQGSYCSQSF Trigger: GAAGCTCTGAGAGCAGTAGCTCCCCTGAGCCGTGCAGCTGGAGAGGGCTGCGCCAACAGCAGAGCTGGGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000436060.2 ENST00000664856.1 |
||
| CDS CCA 72 bp | AAGGCGAGCCAGGCAGGTGAGACGGTGTGGAGAGGATaGGGGCTGGTGAGCCAGTGTGTGTCCCAGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KASQAGETVWRG*GLVSQCVSQQV Trigger: CACCTGCTGGGACACACACTGGCTCACCAGCCCCCATCCTCTCCACACCGTCTCACCTGCCTGGCTCGCCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS CCA 72 bp | CTCTATTCTGTTTGGCTCAGATGGCCCCACGCTCCCTaGGGCAGAGCCGTCCCGAGGCAGCCTCTGCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LYSVWLRWPHAP*GRAVPRQPLPS Trigger: TGAAGGCAGAGGCTGCCTCGGGACGGCTCTGCCCCAGGGAGCGTGGGGCCATCTGAGCCAAACAGAATAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412578.1 ENST00000436060.2 ENST00000664856.1 |
||
| CDS CCA 72 bp | TCTGCTCCAGGATGTCCAGTCCCTCTAGAAGCAGCTTaGAGTGGTCTGGGAGCGGGGGACACTCGTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SAPGCPVPLEAA*SGLGAGDTRGC Trigger: GCAGCCACGAGTGTCCCCCGCTCCCAGACCACTCCAAGCTGCTTCTAGAGGGACTGGACATCCTGGAGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412578.1 |
||
| CDS GCA 72 bp | AGCAGTGGAAAATGGGACTGCAAAGAGCCCCAGCTCTaGTGTTGGCGCAGCCCTCTCCAGCTGCACGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSGKWDCKEPQL*CWRSPLQLHGS Trigger: TGAGCCGTGCAGCTGGAGAGGGCTGCGCCAACAGCAGAGCTGGGGCTCTTTGCAGTCCCATTTTCCACTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664856.1 |
||
| CDS CCA 72 bp | GGGGCTGGTGAGCCAGTGTGTGTCCCAGCAGGTGAGTaGAAGAACACAGCCACTTGTGAGAAGCTGAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GAGEPVCVPAGE*KNTATCEKLRG Trigger: GCCCCTCAGCTTCTCACAAGTGGCTGTGTTCTTCCACTCACCTGCTGGGACACACACTGGCTCACCAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS CAA 72 bp | TTCTGCTCCAGGATGTCCAGTCCCTCTAGAAGCAGCTaGGAGTGGTCTGGGAGCGGGGGACACTCGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FCSRMSSPSRSS*EWSGSGGHSWL Trigger: CAGCCACGAGTGTCCCCCGCTCCCAGACCACTCCAAGCTGCTTCTAGAGGGACTGGACATCCTGGAGCAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412578.1 |
||
| CDS TCA 72 bp | GTGGCAGCAGCGTTCATCCACGCTTCAGGAAGTCGGTaGGGCTGGGTGCTTCAGGGGATGGCCAGATTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: VAAAFIHASGSR*GWVLQGMARFS Trigger: GCTAAATCTGGCCATCCCCTGAAGCACCCAGCCTCACCGACTTCCTGAAGCGTGGATGAACGCTGCTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412578.1 ENST00000436060.2 ENST00000664856.1 |
||
| CDS CAA 90 bp | TGGGACTGTTTCTGCTCCAGGATGTCCAGTCCCTCTAGAAGCAGCTaGGAGTGGTCTGGGAGCGGGGGACACTCGTGGCTGCTCCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: WDCFCSRMSSPSRSS*EWSGSGGHSWLLLC Trigger: ACAAAGGAGCAGCCACGAGTGTCCCCCGCTCCCAGACCACTCCAAGCTGCTTCTAGAGGGACTGGACATCCTGGAGCAGAAACAGTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412578.1 |
||
| CDS GCA 72 bp | TGGGACCCTGGAGAGAAGGGAGTGACGGCCTCACCATaGCAACTAGTCAGAGTAGGGCAGGTATGTCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: WDPGEKGVTASP*QLVRVGQVCLG Trigger: TCCCAGACATACCTGCCCTACTCTGACTAGTTGGCATGGTGAGGCCGTCACTCCCTTCTCTCCAGGGTCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS GCA 72 bp | GACTCACTCCCTGACCAAAGCAGTGGAAAATGGGACTaGAAAGAGCCCCAGCTCTGCTGTTGGCGCAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: DSLPDQSSGKWD*KEPQLCCWRSP Trigger: AGGGCTGCGCCAACAGCAGAGCTGGGGCTCTTTGCAGTCCCATTTTCCACTGCTTTGGTCAGGGAGTGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664856.1 |
||
| CDS CCA 72 bp | CTGGGTGAATTTGTGCCTGGAGAGCACATGGGACCCTaGAGAGAAGGGAGTGACGGCCTCACCATGCCAACT | + |
|
Preference number: 6 (lower is better) Translates to: LGEFVPGEHMGP*REGSDGLTMPT Trigger: AGTTGGCATGGTGAGGCCGTCACTCCCTTCTCTCCAGGGTCCCATGTGCTCTCCAGGCACAAATTCACCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS CCA 72 bp | GCAGGTAGGTGGGAGACATTTGGCACCAACTGCATGTaGAGGTGCAGAGGAAGTTTCCAGGTTTGGGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AGRWETFGTNCM*RCRGSFQVWGQ Trigger: CTGCCCCCAAACCTGGAAACTTCCTCTGCACCTCCACATGCAGTTGGTGCCAAATGTCTCCCACCTACCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS CAA 90 bp | GCTCCCTCGTGCTCAGCAGGATGGCACAAACATCACTCACTCTCCTaGTCAGCGGTTGTCACAGCACATTTGTGGCAGCAGCGTTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: APSCSAGWHKHHSLS*SAVVTAHLWQQRSS Trigger: GGATGAACGCTGCTGCCACAAATGTGCTGTGACAACCGCTGACAAGGAGAGTGAGTGATGTTTGTGCCATCCTGCTGAGCACGAGGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412578.1 ENST00000436060.2 ENST00000664856.1 |
||
| CDS TCA 72 bp | CTCATATCCTCGGATGACATCAGGGGACTCACTCCCTaGCCAAAGCAGTGGAAAATGGGACTGAGGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LISSDDIRGLTP*PKQWKMGLRAG Trigger: CCCAGCCCTCAGTCCCATTTTCCACTGCTTTGGTCAGGGAGTGAGTCCCCTGATGTCATCCGAGGATATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436060.2 |
||
| CDS GCA 72 bp | ACCCAGGCAGGTAGGTGGGAGACATTTGGCACCAACTaGATGTGGAGGTGCAGAGGAAGTTTCCAGGTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: TQAGRWETFGTN*MWRCRGSFQVW Trigger: CCAAACCTGGAAACTTCCTCTGCACCTCCACATGCAGTTGGTGCCAAATGTCTCCCACCTACCTGCCTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS GCA 72 bp | TGGGGCACAACAGACACATGGGTTAAGCAGTCAGCCTaGCTCAGTGGAGTTCCCACTCCACTATGTTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: WGTTDTWVKQSA*LSGVPTPLCSG Trigger: GCCAGAACATAGTGGAGTGGGAACTCCACTGAGGCAGGCTGACTGCTTAACCCATGTGTCTGTTGTGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS CAA 90 bp | GCTCAGCAGGATGGCACAAACATCACTCACTCTCCTTGTCAGCGGTaGTCACAGCACATTTGTGGCAGCAGCGTTCATCCACGCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AQQDGTNITHSPCQR*SQHICGSSVHPRFR Trigger: CCTGAAGCGTGGATGAACGCTGCTGCCACAAATGTGCTGTGACAACCGCTGACAAGGAGAGTGAGTGATGTTTGTGCCATCCTGCTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412578.1 ENST00000436060.2 ENST00000664856.1 |
||
| CDS CAA 72 bp | CACTCACTCTCCTTGTCAGCGGTTGTCACAGCACATTaGTGGCAGCAGCGTTCATCCACGCTTCAGGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: HSLSLSAVVTAH*WQQRSSTLQEV Trigger: GACTTCCTGAAGCGTGGATGAACGCTGCTGCCACAAATGTGCTGTGACAACCGCTGACAAGGAGAGTGAGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412578.1 ENST00000436060.2 ENST00000664856.1 |
||
| CDS CAA 90 bp | CACAAACATCACTCACTCTCCTTGTCAGCGGTTGTCACAGCACATTaGTGGCAGCAGCGTTCATCCACGCTTCAGGAAGTCGGTGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: HKHHSLSLSAVVTAH*WQQRSSTLQEVGEA Trigger: AGCCTCACCGACTTCCTGAAGCGTGGATGAACGCTGCTGCCACAAATGTGCTGTGACAACCGCTGACAAGGAGAGTGAGTGATGTTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412578.1 ENST00000436060.2 ENST00000664856.1 |
||
| CDS CAA 72 bp | TGCTCAGCAGGATGGCACAAACATCACTCACTCTCCTaGTCAGCGGTTGTCACAGCACATTTGTGGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CSAGWHKHHSLS*SAVVTAHLWQQ Trigger: CTGCTGCCACAAATGTGCTGTGACAACCGCTGACAAGGAGAGTGAGTGATGTTTGTGCCATCCTGCTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412578.1 ENST00000436060.2 ENST00000664856.1 |
||
| CDS CAA 90 bp | AACGCTTTCTGGGACAGAGCTAGATCAAGAAATGTCTGGGTGAATTaGTGCCTGGAGAGCACATGGGACCCTGGAGAGAAGGGAGTGACG | + |
|
Preference number: 6 (lower is better) Translates to: NAFWDRARSRNVWVN*CLESTWDPGEKGVT Trigger: CGTCACTCCCTTCTCTCCAGGGTCCCATGTGCTCTCCAGGCACAAATTCACCCAGACATTTCTTGATCTAGCTCTGTCCCAGAAAGCGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS TCA 72 bp | CTCATATCCTCGGATGACATCAGGGGACTCACTCCCTaGCCAAAGCAGTGGAAAATGGGACTGTTTCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LISSDDIRGLTP*PKQWKMGLFLL Trigger: GAGCAGAAACAGTCCCATTTTCCACTGCTTTGGTCAGGGAGTGAGTCCCCTGATGTCATCCGAGGATATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412578.1 |
||
| CDS CAA 72 bp | GATGGCACAAACATCACTCACTCTCCTTGTCAGCGGTaGTCACAGCACATTTGTGGCAGCAGCGTTCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: DGTNITHSPCQR*SQHICGSSVHP Trigger: TGGATGAACGCTGCTGCCACAAATGTGCTGTGACAACCGCTGACAAGGAGAGTGAGTGATGTTTGTGCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412578.1 ENST00000436060.2 ENST00000664856.1 |
||
| CDS CAA 72 bp | TGGGACAGAGCTAGATCAAGAAATGTCTGGGTGAATTaGTGCCTGGAGAGCACATGGGACCCTGGAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WDRARSRNVWVN*CLESTWDPGEK Trigger: CTTCTCTCCAGGGTCCCATGTGCTCTCCAGGCACAAATTCACCCAGACATTTCTTGATCTAGCTCTGTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS CCA 72 bp | AACGCTTTCTGGGACAGAGCTAGATCAAGAAATGTCTaGGTGAATTTGTGCCTGGAGAGCACATGGGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: NAFWDRARSRNV*VNLCLESTWDP Trigger: AGGGTCCCATGTGCTCTCCAGGCACAAATTCACCCAGACATTTCTTGATCTAGCTCTGTCCCAGAAAGCGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS TCA 72 bp | TCAGTGGAGTTCCCACTCCACTATGTTCTGGCTGTGTaGCTTTGGACAAGTTGCTTAACCACTCTGAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: SVEFPLHYVLAV*LWTSCLTTLNL Trigger: GAGGTTCAGAGTGGTTAAGCAACTTGTCCAAAGTCACACAGCCAGAACATAGTGGAGTGGGAACTCCACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS GCA 72 bp | CACTCGTGGCTGCTCCTTTGTAGCAGTTCTAGAACTTaGAAGCATGGGACAAAGATGATCATGATCATTTCG | + |
|
Preference number: 6 (lower is better) Translates to: HSWLLLCSSSRT*KHGTKMIMIIS Trigger: CGAAATGATCATGATCATCTTTGTCCCATGCTTGCAAGTTCTAGAACTGCTACAAAGGAGCAGCCACGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412578.1 |
||
| CDS GCA 72 bp | GTATGTGTCACTTGCACGGCAATTAATACAGGTATTTaGCATTGCAAAGGTAACGCTTTCTGGGACAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VCVTCTAINTGI*HCKGNAFWDRA Trigger: AGCTCTGTCCCAGAAAGCGTTACCTTTGCAATGGCAAATACCTGTATTAATTGCCGTGCAAGTGACACATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS TCA 72 bp | GATGTACAGATCTTAAGTGACCCATCAAATGACTATTaGCAAGTACACACACTTGTCCACCCAAATAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: DVQILSDPSNDY*QVHTLVHPNRI Trigger: GATTCTATTTGGGTGGACAAGTGTGTGTACTTGTCAATAGTCATTTGATGGGTCACTTAAGATCTGTACATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664856.1 |
||
| CDS CCA 72 bp | AACATTGGCATCAGAAAGGGCCTTCTAGATCTTAATTaGACAGAATTAGCCATTTTAGAGAAGAGGAACCAA | + |
|
Preference number: 6 (lower is better) Translates to: NIGIRKGLLDLN*TELAILEKRNQ Trigger: TTGGTTCCTCTTCTCTAAAATGGCTAATTCTGTCCAATTAAGATCTAGAAGGCCCTTTCTGATGCCAATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||
| CDS CAA 72 bp | GCCCAGTTTTCTCATCTACAAAATAGAGGAACATACTaGCCTCTCTTTCAAGAATACTGCAAAGAGTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AQFSHLQNRGTY*PLFQEYCKEFV Trigger: CACAAACTCTTTGCAGTATTCTTGAAAGAGAGGCAAGTATGTTCCTCTATTTTGTAGATGAGAAAACTGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412578.1 ENST00000664856.1 |
||