Pregenerated sensors for LINC00605 (Homo sapiens)

Ensembl gene IDs: ENSG00000251533

Ensembl transcript IDs: ENST00000514902.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CACCACCAGGCTAGTGGACAAATCCCTTTGTTTCCAGGGTGGGCCTaGAAGGGATTAGGTTACTTTCTGGTCCACACCAGAGGCTCCCCT	+
Preference number: 5 (lower is better) Translates to: HHQASGQIPLFPGWA*KGLGYFLVHTRGSP Trigger: AGGGGAGCCTCTGGTGTGGACCAGAAAGTAACCTAATCCCTTCCAGGCCCACCCTGGAAACAAAGGGATTTGTCCACTAGCCTGGTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514902.2
CDS CCA 90 bp	GGTTCTCACCACCAGGCTAGTGGACAAATCCCTTTGTTTCCAGGGTaGGCCTGGAAGGGATTAGGTTACTTTCTGGTCCACACCAGAGGC	+
Preference number: 5 (lower is better) Translates to: GSHHQASGQIPLFPG*AWKGLGYFLVHTRG Trigger: GCCTCTGGTGTGGACCAGAAAGTAACCTAATCCCTTCCAGGCCCACCCTGGAAACAAAGGGATTTGTCCACTAGCCTGGTGGTGAGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514902.2
CDS TCA 90 bp	CACACGGTGTGGAATCCTCAACTTAAGTACAAAACACGACGAAACTaGTTAGGAAAATCCATTTGTCAACTGTGGGAGGCTCTGGATGTG	+
Preference number: 5 (lower is better) Translates to: HTVWNPQLKYKTRRN*LGKSICQLWEALDV Trigger: CACATCCAGAGCCTCCCACAGTTGACAAATGGATTTTCCTAATCAGTTTCGTCGTGTTTTGTACTTAAGTTGAGGATTCCACACCGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514902.2
CDS TCA 90 bp	GAAAACATCACAACCGTTGCGATTGATTCACCACTACATCTCTTCTaGAAGTACCACACGGTGTGGAATCCTCAACTTAAGTACAAAACA	+
Preference number: 5 (lower is better) Translates to: ENITTVAIDSPLHLF*KYHTVWNPQLKYKT Trigger: TGTTTTGTACTTAAGTTGAGGATTCCACACCGTGTGGTACTTTCAGAAGAGATGTAGTGGTGAATCAATCGCAACGGTTGTGATGTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514902.2
CDS CAA 90 bp	AGGAGGCCACATGGTTCTCACCACCAGGCTAGTGGACAAATCCCTTaGTTTCCAGGGTGGGCCTGGAAGGGATTAGGTTACTTTCTGGTC	+
Preference number: 6 (lower is better) Translates to: RRPHGSHHQASGQIP*FPGWAWKGLGYFLV Trigger: GACCAGAAAGTAACCTAATCCCTTCCAGGCCCACCCTGGAAACAAAGGGATTTGTCCACTAGCCTGGTGGTGAGAACCATGTGGCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514902.2
CDS TCA 72 bp	GGACTTTATCAAGGGTGTAATGGAAGACGCTGGGCATaGTTCACATGTTGTGGAGACCCCTGGAGAAGGGGG	+
Preference number: 6 (lower is better) Translates to: GLYQGCNGRRWA*FTCCGDPWRRG Trigger: CCCCCTTCTCCAGGGGTCTCCACAACATGTGAATCATGCCCAGCGTCTTCCATTACACCCTTGATAAAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514902.2
CDS CAA 72 bp	CATGGTTCTCACCACCAGGCTAGTGGACAAATCCCTTaGTTTCCAGGGTGGGCCTGGAAGGGATTAGGTTAC	+
Preference number: 6 (lower is better) Translates to: HGSHHQASGQIP*FPGWAWKGLGY Trigger: GTAACCTAATCCCTTCCAGGCCCACCCTGGAAACAAAGGGATTTGTCCACTAGCCTGGTGGTGAGAACCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514902.2
CDS TCA 72 bp	ACAACCGTTGCGATTGATTCACCACTACATCTCTTCTaGAAGTACCACACGGTGTGGAATCCTCAACTTAAG	+
Preference number: 6 (lower is better) Translates to: TTVAIDSPLHLF*KYHTVWNPQLK Trigger: CTTAAGTTGAGGATTCCACACCGTGTGGTACTTTCAGAAGAGATGTAGTGGTGAATCAATCGCAACGGTTGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514902.2

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