Pregenerated sensors for LINC00592 (Homo sapiens)
Ensembl gene IDs: ENSG00000258279Ensembl transcript IDs: ENST00000549830.2, ENST00000640420.1, ENST00000653127.1, ENST00000656394.1, ENST00000656951.1, ENST00000658977.1, ENST00000661213.1, ENST00000663735.1, ENST00000665995.1, ENST00000667021.1, ENST00000667981.1, ENST00000668114.1, ENST00000668621.1, ENST00000669247.1, ENST00000669936.1
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGAACACTGAGGCTCGGCGAGGCGACAAGTCTTTCTGAGGGCCAGTaGAGCAGACCAGCCTGGGAGGCCTGCCTACAGGTCCCTGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: RTLRLGEATSLSEGQ*SRPAWEACLQVPGA Trigger: GGCCCCAGGGACCTGTAGGCAGGCCTCCCAGGCTGGTCTGCTCCACTGGCCCTCAGAAAGACTTGTCGCCTCGCCGAGCCTCAGTGTTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667981.1 |
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| CDS CCA 90 bp | TCCAGCATTCTCTGGGAGCCGCTGTCGGGTCTGCAGCCAAGCCCTTaGCTTGGAAGGGCAGGAGCCTGCCTGAGGCACAATCCCACTGGC | + |
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Preference number: 5 (lower is better) Translates to: SSILWEPLSGLQPSP*LGRAGACLRHNPTG Trigger: GCCAGTGGGATTGTGCCTCAGGCAGGCTCCTGCCCTTCCAAGCCAAGGGCTTGGCTGCAGACCCGACAGCGGCTCCCAGAGAATGCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656394.1 ENST00000669936.1 |
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| CDS TCA 90 bp | GAGAGGGTGAGGGAAGTGGCCCAACGCCCCCTTCCCTTCTGGAGCTaGCTGCTCAGGCAGCATTCCATTCCGGAAAGGTCAGCTCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: ERVREVAQRPLPFWS*LLRQHSIPERSAPA Trigger: GGCAGGAGCTGACCTTTCCGGAATGGAATGCTGCCTGAGCAGTCAGCTCCAGAAGGGAAGGGGGCGTTGGGCCACTTCCCTCACCCTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000640420.1 |
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| CDS GCA 90 bp | CCTCAAGGAGGGAAGAGAGGGACATCATGGTGGCGCTGGACTCCCTaGAGGGTATGGGATGAACTCTGCTGCTCAGATGGGCAGGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: PQGGKRGTSWWRWTP*RVWDELCCSDGQGP Trigger: GGGCCCCTGCCCATCTGAGCAGCAGAGTTCATCCCATACCCTGCAGGGAGTCCAGCGCCACCATGATGTCCCTCTCTTCCCTCCTTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656394.1 ENST00000669936.1 |
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| CDS CCA 90 bp | CAGGCTGGACCCAGCCAGCCTCAAGGAGGGAAGAGAGGGACATCATaGTGGCGCTGGACTCCCTGCAGGGTATGGGATGAACTCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: QAGPSQPQGGKRGTS*WRWTPCRVWDELCC Trigger: GCAGCAGAGTTCATCCCATACCCTGCAGGGAGTCCAGCGCCACCATGATGTCCCTCTCTTCCCTCCTTGAGGCTGGCTGGGTCCAGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656394.1 ENST00000669936.1 |
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| CDS TCA 90 bp | TCTTCAGATGAGAACACTGAGGCTCGGCGAGGCGACAAGTCTTTCTaGGGGCCAGTGGAGCAGACCAGCCTGGGAGGCCTCCCCAAGCTC | + |
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Preference number: 5 (lower is better) Translates to: SSDENTEARRGDKSF*GPVEQTSLGGLPKL Trigger: GAGCTTGGGGAGGCCTCCCAGGCTGGTCTGCTCCACTGGCCCTCAGAAAGACTTGTCGCCTCGCCGAGCCTCAGTGTTCTCATCTGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000549830.2 ENST00000656394.1 ENST00000658977.1 ENST00000668114.1 ENST00000668621.1 |
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| CDS CCA 90 bp | CCCAGCCAGCCTCAAGGAGGGAAGAGAGGGACATCATGGTGGCGCTaGACTCCCTGCAGGGTATGGGATGAACTCTGCTGCTCAGATGGG | + |
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Preference number: 5 (lower is better) Translates to: PSQPQGGKRGTSWWR*TPCRVWDELCCSDG Trigger: CCCATCTGAGCAGCAGAGTTCATCCCATACCCTGCAGGGAGTCCAGCGCCACCATGATGTCCCTCTCTTCCCTCCTTGAGGCTGGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656394.1 ENST00000669936.1 |
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| CDS TCA 90 bp | TCTTCAGATGAGAACACTGAGGCTCGGCGAGGCGACAAGTCTTTCTaGGGGCCAGTGGAGCAGACCAGCCTGGGAGGCCTGCCTACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSDENTEARRGDKSF*GPVEQTSLGGLPTG Trigger: ACCTGTAGGCAGGCCTCCCAGGCTGGTCTGCTCCACTGGCCCTCAGAAAGACTTGTCGCCTCGCCGAGCCTCAGTGTTCTCATCTGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667981.1 |
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| CDS CCA 90 bp | AGAACACTGAGGCTCGGCGAGGCGACAAGTCTTTCTGAGGGCCAGTaGAGCAGACCAGCCTGGGAGGCCTCCCCAAGCTCCTTAATCACT | + |
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Preference number: 5 (lower is better) Translates to: RTLRLGEATSLSEGQ*SRPAWEASPSSLIT Trigger: AGTGATTAAGGAGCTTGGGGAGGCCTCCCAGGCTGGTCTGCTCCACTGGCCCTCAGAAAGACTTGTCGCCTCGCCGAGCCTCAGTGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000549830.2 ENST00000656394.1 ENST00000658977.1 ENST00000668114.1 ENST00000668621.1 |
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| CDS GCA 90 bp | ACATCATGGTGGCGCTGGACTCCCTGCAGGGTATGGGATGAACTCTaGTGCTCAGATGGGCAGGGGCCCACATGGAAGACAGTGACTCAC | + |
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Preference number: 5 (lower is better) Translates to: TSWWRWTPCRVWDEL*CSDGQGPTWKTVTH Trigger: GTGAGTCACTGTCTTCCATGTGGGCCCCTGCCCATCTGAGCAGCAGAGTTCATCCCATACCCTGCAGGGAGTCCAGCGCCACCATGATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656394.1 ENST00000669936.1 |
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| CDS CCA 90 bp | CCAAATGGCTGCCTAGAATGTGCAAGCTTGGCTTCCAGCATTCTCTaGGAGCCGCTGTCGGGTCTGCAGCCAAGCCCTTGGCTTGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: PNGCLECASLASSIL*EPLSGLQPSPWLGR Trigger: CCTTCCAAGCCAAGGGCTTGGCTGCAGACCCGACAGCGGCTCCCAGAGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656394.1 ENST00000669936.1 |
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| CDS TCA 90 bp | AAGCTTATCCCTAGTCAGGTTGGAATCAGCCTGGCCCAGGTGGCTTaGCTTGAAGTGATCAGGCAAGTGTCCACACAGTCAGCCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: KLIPSQVGISLAQVA*LEVIRQVSTQSASL Trigger: GAGGCTGGCTGACTGTGTGGACACTTGCCTGATCACTTCAAGTCAAGCCACCTGGGCCAGGCTGATTCCAACCTGACTAGGGATAAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640420.1 |
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| CDS GCA 90 bp | CTGGTCATGCGCAGAGAAGAATCTTCCAAATGGCTGCCTAGAATGTaGAAGCTTGGCTTCCAGCATTCTCTGGGAGCCGCTGTCGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: LVMRREESSKWLPRM*KLGFQHSLGAAVGS Trigger: AGACCCGACAGCGGCTCCCAGAGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTTCTCTGCGCATGACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656394.1 ENST00000669936.1 |
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| CDS GCA 90 bp | CCATTTCTTCCCATTCAGGGCTCTGAGTGTGTAGGAGAAAGGCCTTaGCCACTCTATTCTTCAGATGAGAACACTGAGGCTCGGCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: PFLPIQGSECVGERP*PLYSSDENTEARRG Trigger: GCCTCGCCGAGCCTCAGTGTTCTCATCTGAAGAATAGAGTGGGCAAGGCCTTTCTCCTACACACTCAGAGCCCTGAATGGGAAGAAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000549830.2 ENST00000656394.1 ENST00000667981.1 ENST00000668114.1 ENST00000668621.1 |
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| CDS GCA 90 bp | CTGGTCATGCGCAGAGAAGAATCTTCCAAATGGCTGCCTAGAATGTaGAAGCTTGGCTTCCAGCATTCTCAGTTCCTCGGGTGGTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: LVMRREESSKWLPRM*KLGFQHSQFLGWSL Trigger: CAGGGACCACCCGAGGAACTGAGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTTCTCTGCGCATGACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640420.1 |
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| CDS GCA 90 bp | TGCAAGCTTGGCTTCCAGCATTCTGAGTGTGTAGGAGAAAGGCCTTaGCCACTCTATTCTTCAGATGAGAACACTGAGGCTCGGCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: CKLGFQHSECVGERP*PLYSSDENTEARRG Trigger: GCCTCGCCGAGCCTCAGTGTTCTCATCTGAAGAATAGAGTGGGCAAGGCCTTTCTCCTACACACTCAGAATGCTGGAAGCCAAGCTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658977.1 |
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| CDS CCA 90 bp | AACTGGAGGTTCTCGTTGCCTAAATCTCTCCTGGCTTGCTGCACATaGAACCCATTTCTTCCCATTCAGGGCTCTGCCTACAGGTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: NWRFSLPKSLLACCT*NPFLPIQGSAYRSL Trigger: CAGGGACCTGTAGGCAGAGCCCTGAATGGGAAGAAATGGGTTCCATGTGCAGCAAGCCAGGAGAGATTTAGGCAACGAGAACCTCCAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653127.1 |
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| CDS CCA 90 bp | GGCTGCCTAGAATGTGCAAGCTTGGCTTCCAGCATTCCATGTTTTTaGCATTTGCACCCATATCACCAAGGCTTCTTCAGCACAGCCCCC | + |
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Preference number: 5 (lower is better) Translates to: GCLECASLASSIPCF*HLHPYHQGFFSTAP Trigger: GGGGGCTGTGCTGAAGAAGCCTTGGTGATATGGGTGCAAATGCCAAAAACATGGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000549830.2 ENST00000667021.1 |
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| CDS CCA 90 bp | GGCTGCCTAGAATGTGCAAGCTTGGCTTCCAGCATTCCATGTTTTTaGCATTTGCACCCATATCACCAAGGCTTCTTCAGCACAGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: GCLECASLASSIPCF*HLHPYHQGFFSTAR Trigger: GCGGGCTGTGCTGAAGAAGCCTTGGTGATATGGGTGCAAATGCCAAAAACATGGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668114.1 |
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| CDS GCA 90 bp | TTCCTTTTCAGCTGGTCATGCGCAGAGAAGAATCTTCCAAATGGCTaGCTAGAATGTGCAAGCTTGGCTTCCAGCATTCTCTGGGAGCCG | + |
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Preference number: 5 (lower is better) Translates to: FLFSWSCAEKNLPNG*LECASLASSILWEP Trigger: CGGCTCCCAGAGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTTCTCTGCGCATGACCAGCTGAAAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656394.1 ENST00000669936.1 |
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| CDS GCA 90 bp | CTGGTCATGCGCAGAGAAGAATCTTCCAAATGGCTGCCTAGAATGTaGAAGCTTGGCTTCCAGCATTCCCACATGGAAGACAGTGACTCA | + |
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Preference number: 5 (lower is better) Translates to: LVMRREESSKWLPRM*KLGFQHSHMEDSDS Trigger: TGAGTCACTGTCTTCCATGTGGGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTTCTCTGCGCATGACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653127.1 ENST00000663735.1 ENST00000667981.1 |
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| CDS CCA 90 bp | AACTGGAGGTTCTCGTTGCCTAAATCTCTCCTGGCTTGCTGCACATaGAACCCATTTCTTCCCATTCAGGGCTCTGAGTGTGTAGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: NWRFSLPKSLLACCT*NPFLPIQGSECVGE Trigger: TTCTCCTACACACTCAGAGCCCTGAATGGGAAGAAATGGGTTCCATGTGCAGCAAGCCAGGAGAGATTTAGGCAACGAGAACCTCCAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000549830.2 ENST00000656394.1 ENST00000667981.1 ENST00000668114.1 ENST00000668621.1 |
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| CDS CCA 90 bp | AATGGCTGCCTAGAATGTGCAAGCTTGGCTTCCAGCATTCCCACATaGAAGACAGTGACTCACACAGATGAGCCTGCTAGAGCACCTTTT | + |
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Preference number: 5 (lower is better) Translates to: NGCLECASLASSIPT*KTVTHTDEPARAPF Trigger: AAAAGGTGCTCTAGCAGGCTCATCTGTGTGAGTCACTGTCTTCCATGTGGGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653127.1 ENST00000663735.1 ENST00000667981.1 |
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| CDS CCA 90 bp | AATGTGCAAGCTTGGCTTCCAGCATTCATAAGGGCCTCAGCAACTTaGGGGCTCAAGGCCTGTCCATTATCAGTCAGGTTCAATAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: NVQAWLPAFIRASAT*GLKACPLSVRFNKE Trigger: CTCCTTATTGAACCTGACTGATAATGGACAGGCCTTGAGCCCCCAAGTTGCTGAGGCCCTTATGAATGCTGGAAGCCAAGCTTGCACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656951.1 ENST00000668621.1 |
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| CDS GCA 90 bp | CTGGTCATGCGCAGAGAAGAATCTTCCAAATGGCTGCCTAGAATGTaGAAGCTTGGCTTCCAGCATTCCATGTTTTTGGCATTTGCACCC | + |
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Preference number: 5 (lower is better) Translates to: LVMRREESSKWLPRM*KLGFQHSMFLAFAP Trigger: GGGTGCAAATGCCAAAAACATGGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTTCTCTGCGCATGACCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000549830.2 ENST00000667021.1 ENST00000668114.1 |
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| CDS CCA 90 bp | CCCATATCACCAAGGCTTCTTCAGCACAGCCCGCCTTGGGAAGGCTaGATATCACAATGGGTAGAGCAGAGATTTCAGAGTCAAAGATAT | + |
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Preference number: 5 (lower is better) Translates to: PISPRLLQHSPPWEG*ISQWVEQRFQSQRY Trigger: ATATCTTTGACTCTGAAATCTCTGCTCTACCCATTGTGATATCCAGCCTTCCCAAGGCGGGCTGTGCTGAAGAAGCCTTGGTGATATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661213.1 ENST00000668114.1 |
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| CDS CCA 72 bp | CTCTGGGAGCCGCTGTCGGGTCTGCAGCCAAGCCCTTaGCTTGGAAGGGCAGGAGCCTGCCTGAGGCACAAT | + |
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Preference number: 6 (lower is better) Translates to: LWEPLSGLQPSP*LGRAGACLRHN Trigger: ATTGTGCCTCAGGCAGGCTCCTGCCCTTCCAAGCCAAGGGCTTGGCTGCAGACCCGACAGCGGCTCCCAGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656394.1 ENST00000669936.1 |
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| CDS CCA 72 bp | AGGCTCGGCGAGGCGACAAGTCTTTCTGAGGGCCAGTaGAGCAGACCAGCCTGGGAGGCCTGCCTACAGGTC | + |
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Preference number: 6 (lower is better) Translates to: RLGEATSLSEGQ*SRPAWEACLQV Trigger: GACCTGTAGGCAGGCCTCCCAGGCTGGTCTGCTCCACTGGCCCTCAGAAAGACTTGTCGCCTCGCCGAGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667981.1 |
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| CDS TCA 72 bp | GAGAACACTGAGGCTCGGCGAGGCGACAAGTCTTTCTaGGGGCCAGTGGAGCAGACCAGCCTGGGAGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: ENTEARRGDKSF*GPVEQTSLGGL Trigger: GAGGCCTCCCAGGCTGGTCTGCTCCACTGGCCCTCAGAAAGACTTGTCGCCTCGCCGAGCCTCAGTGTTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000549830.2 ENST00000656394.1 ENST00000658977.1 ENST00000668114.1 ENST00000668621.1 |
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| CDS TCA 72 bp | GAGAACACTGAGGCTCGGCGAGGCGACAAGTCTTTCTaGGGGCCAGTGGAGCAGACCAGCCTGGGAGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ENTEARRGDKSF*GPVEQTSLGGL Trigger: CAGGCCTCCCAGGCTGGTCTGCTCCACTGGCCCTCAGAAAGACTTGTCGCCTCGCCGAGCCTCAGTGTTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667981.1 |
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| CDS CAA 90 bp | TTCCAGCATTCTCTGGGAGCCGCTGTCGGGTCTGCAGCCAAGCCCTaGGCTTGGAAGGGCAGGAGCCTGCCTGAGGCACAATCCCACTGG | + |
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Preference number: 6 (lower is better) Translates to: FQHSLGAAVGSAAKP*AWKGRSLPEAQSHW Trigger: CCAGTGGGATTGTGCCTCAGGCAGGCTCCTGCCCTTCCAAGCCAAGGGCTTGGCTGCAGACCCGACAGCGGCTCCCAGAGAATGCTGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656394.1 ENST00000669936.1 |
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| CDS TCA 72 bp | CTGGCAGGAACACCCCACTCTTACCCCAACTCACAGTaGTCGCCGGAGGGTGGTGCACTCTGCTCCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: LAGTPHSYPNSQ*SPEGGALCSST Trigger: GGTGCTGGAGCAGAGTGCACCACCCTCCGGCGATCACTGTGAGTTGGGGTAAGAGTGGGGTGTTCCTGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000549830.2 ENST00000653127.1 ENST00000656394.1 ENST00000656951.1 ENST00000663735.1 ENST00000665995.1 ENST00000667021.1 ENST00000667981.1 ENST00000668114.1 ENST00000668621.1 ENST00000669247.1 ENST00000669936.1 |
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| CDS TCA 72 bp | CAGTTCCTCGGGTGGTCCCTGCCCAGGAGGCAGCAGTaGTCGTCGCTGAGACCATGGTCTGTAGAGCAAACC | + |
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Preference number: 6 (lower is better) Translates to: QFLGWSLPRRQQ*SSLRPWSVEQT Trigger: GGTTTGCTCTACAGACCATGGTCTCAGCGACGATCACTGCTGCCTCCTGGGCAGGGACCACCCGAGGAACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640420.1 |
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| CDS GCA 72 bp | TGGCGCTGGACTCCCTGCAGGGTATGGGATGAACTCTaGTGCTCAGATGGGCAGGGGCCCACATGGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: WRWTPCRVWDEL*CSDGQGPTWKT Trigger: TGTCTTCCATGTGGGCCCCTGCCCATCTGAGCAGCAGAGTTCATCCCATACCCTGCAGGGAGTCCAGCGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656394.1 ENST00000669936.1 |
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| CDS CCA 72 bp | CCCAGCCAGCCTCAAGGAGGGAAGAGAGGGACATCATaGTGGCGCTGGACTCCCTGCAGGGTATGGGATGAA | + |
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Preference number: 6 (lower is better) Translates to: PSQPQGGKRGTS*WRWTPCRVWDE Trigger: TTCATCCCATACCCTGCAGGGAGTCCAGCGCCACCATGATGTCCCTCTCTTCCCTCCTTGAGGCTGGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656394.1 ENST00000669936.1 |
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| CDS GCA 72 bp | GGGAAGAGAGGGACATCATGGTGGCGCTGGACTCCCTaGAGGGTATGGGATGAACTCTGCTGCTCAGATGGG | + |
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Preference number: 6 (lower is better) Translates to: GKRGTSWWRWTP*RVWDELCCSDG Trigger: CCCATCTGAGCAGCAGAGTTCATCCCATACCCTGCAGGGAGTCCAGCGCCACCATGATGTCCCTCTCTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656394.1 ENST00000669936.1 |
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| CDS CCA 72 bp | CCTCAAGGAGGGAAGAGAGGGACATCATGGTGGCGCTaGACTCCCTGCAGGGTATGGGATGAACTCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PQGGKRGTSWWR*TPCRVWDELCC Trigger: GCAGCAGAGTTCATCCCATACCCTGCAGGGAGTCCAGCGCCACCATGATGTCCCTCTCTTCCCTCCTTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656394.1 ENST00000669936.1 |
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| CDS TCA 72 bp | GCTGCTCAGATGGGCAGGGGCCCACATGGAAGACAGTaGCTCACACAGATGAGCCTGCTAGAGCACCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: AAQMGRGPHGRQ*LTQMSLLEHLF Trigger: GAAAAGGTGCTCTAGCAGGCTCATCTGTGTGAGTCACTGTCTTCCATGTGGGCCCCTGCCCATCTGAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656394.1 ENST00000669936.1 |
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| CDS GCA 72 bp | TGCCTAACACGCACTTGGGGACAGCTTCCAATAGGATaGAAGTGGCAGACAAAGGTACCCCAGGAGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: CLTRTWGQLPIG*KWQTKVPQEGR Trigger: CCTGCCCTCCTGGGGTACCTTTGTCTGCCACTTGCATCCTATTGGAAGCTGTCCCCAAGTGCGTGTTAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000549830.2 ENST00000653127.1 ENST00000656394.1 ENST00000656951.1 ENST00000663735.1 ENST00000665995.1 ENST00000667021.1 ENST00000667981.1 ENST00000668114.1 ENST00000668621.1 ENST00000669247.1 ENST00000669936.1 |
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| CDS CCA 72 bp | ACAAGTCTTTCTGAGGGCCAGTGGAGCAGACCAGCCTaGGAGGCCTCCCCAAGCTCCTTAATCACTTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: TSLSEGQWSRPA*EASPSSLITSD Trigger: GTCTGAAGTGATTAAGGAGCTTGGGGAGGCCTCCCAGGCTGGTCTGCTCCACTGGCCCTCAGAAAGACTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000549830.2 ENST00000656394.1 ENST00000658977.1 ENST00000668114.1 ENST00000668621.1 |
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| CDS CAA 90 bp | TGCGCAGAGAAGAATCTTCCAAATGGCTGCCTAGAATGTGCAAGCTaGGCTTCCAGCATTCTCTGGGAGCCGCTGTCGGGTCTGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: CAEKNLPNGCLECAS*ASSILWEPLSGLQP Trigger: TGGCTGCAGACCCGACAGCGGCTCCCAGAGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTTCTCTGCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656394.1 ENST00000669936.1 |
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| CDS CAA 90 bp | TGCGCAGAGAAGAATCTTCCAAATGGCTGCCTAGAATGTGCAAGCTaGGCTTCCAGCATTCTCAGTTCCTCGGGTGGTCCCTGCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: CAEKNLPNGCLECAS*ASSILSSSGGPCPG Trigger: TCCTGGGCAGGGACCACCCGAGGAACTGAGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTTCTCTGCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640420.1 |
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| CDS CCA 72 bp | CCCATATCACCAAGGCTTCTTCAGCACAGCCCGCCTTaGGAAGGCTGGATATCACAATGGGTAGAGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: PISPRLLQHSPP*EGWISQWVEQR Trigger: TCTCTGCTCTACCCATTGTGATATCCAGCCTTCCCAAGGCGGGCTGTGCTGAAGAAGCCTTGGTGATATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661213.1 ENST00000668114.1 |
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| CDS CCA 72 bp | GCTTGGCTTCCAGCATTCATAAGGGCCTCAGCAACTTaGGGGCTCAAGGCCTGTCCATTATCAGTCAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: AWLPAFIRASAT*GLKACPLSVRF Trigger: GAACCTGACTGATAATGGACAGGCCTTGAGCCCCCAAGTTGCTGAGGCCCTTATGAATGCTGGAAGCCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656951.1 ENST00000668621.1 |
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| CDS CAA 72 bp | ACCCATATCACCAAGGCTTCTTCAGCACAGCCCGCCTaGGGAAGGCTGGATATCACAATGGGTAGAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: THITKASSAQPA*GRLDITMGRAE Trigger: CTCTGCTCTACCCATTGTGATATCCAGCCTTCCCAAGGCGGGCTGTGCTGAAGAAGCCTTGGTGATATGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661213.1 ENST00000668114.1 |
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| CDS CAA 72 bp | AGCTTGGCTTCCAGCATTCATAAGGGCCTCAGCAACTaGGGGGCTCAAGGCCTGTCCATTATCAGTCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: SLASSIHKGLSN*GAQGLSIISQV Trigger: AACCTGACTGATAATGGACAGGCCTTGAGCCCCCAAGTTGCTGAGGCCCTTATGAATGCTGGAAGCCAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000656951.1 ENST00000668621.1 |
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| CDS CAA 72 bp | AAGAATCTTCCAAATGGCTGCCTAGAATGTGCAAGCTaGGCTTCCAGCATTCTCTGGGAGCCGCTGTCGGGT | + |
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Preference number: 6 (lower is better) Translates to: KNLPNGCLECAS*ASSILWEPLSG Trigger: ACCCGACAGCGGCTCCCAGAGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656394.1 ENST00000669936.1 |
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| CDS CAA 90 bp | TGGCTGCCTAGAATGTGCAAGCTTGGCTTCCAGCATTCCATGTTTTaGGCATTTGCACCCATATCACCAAGGCTTCTTCAGCACAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: WLPRMCKLGFQHSMF*AFAPISPRLLQHSP Trigger: GGGGCTGTGCTGAAGAAGCCTTGGTGATATGGGTGCAAATGCCAAAAACATGGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000549830.2 ENST00000667021.1 |
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| CDS CAA 90 bp | TGCGCAGAGAAGAATCTTCCAAATGGCTGCCTAGAATGTGCAAGCTaGGCTTCCAGCATTCATAAGGGCCTCAGCAACTTGGGGGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: CAEKNLPNGCLECAS*ASSIHKGLSNLGAQ Trigger: TTGAGCCCCCAAGTTGCTGAGGCCCTTATGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTTCTCTGCGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000656951.1 ENST00000668621.1 |
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| CDS CAA 90 bp | CTAGAATGTGCAAGCTTGGCTTCCAGCATTCCATGTTTTTGGCATTaGCACCCATATCACCAAGGCTTCTTCAGCACAGCCCGCCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LECASLASSIPCFWH*HPYHQGFFSTARLG Trigger: CCCAAGGCGGGCTGTGCTGAAGAAGCCTTGGTGATATGGGTGCAAATGCCAAAAACATGGAATGCTGGAAGCCAAGCTTGCACATTCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668114.1 |
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| CDS CAA 90 bp | TGGCTGCCTAGAATGTGCAAGCTTGGCTTCCAGCATTCCATGTTTTaGGCATTTGCACCCATATCACCAAGGCTTCTTCAGCACAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: WLPRMCKLGFQHSMF*AFAPISPRLLQHSP Trigger: CGGGCTGTGCTGAAGAAGCCTTGGTGATATGGGTGCAAATGCCAAAAACATGGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668114.1 |
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| CDS TCA 72 bp | CTGCACATGGAACCCATTTCTTCCCATTCAGGGCTCTaGGTGTGTAGGAGAAAGGCCTTGCCCACTCTATTC | + |
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Preference number: 6 (lower is better) Translates to: LHMEPISSHSGL*VCRRKALPTLF Trigger: GAATAGAGTGGGCAAGGCCTTTCTCCTACACACTCAGAGCCCTGAATGGGAAGAAATGGGTTCCATGTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000549830.2 ENST00000656394.1 ENST00000667981.1 ENST00000668114.1 ENST00000668621.1 |
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| CDS TCA 72 bp | CAAGCTTGGCTTCCAGCATTCCCACATGGAAGACAGTaGCTCACACAGATGAGCCTGCTAGAGCACCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: QAWLPAFPHGRQ*LTQMSLLEHLF Trigger: GAAAAGGTGCTCTAGCAGGCTCATCTGTGTGAGTCACTGTCTTCCATGTGGGAATGCTGGAAGCCAAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653127.1 ENST00000663735.1 ENST00000667981.1 |
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| CDS GCA 72 bp | CCCATTCAGGGCTCTGAGTGTGTAGGAGAAAGGCCTTaGCCACTCTATTCTTCAGATGAGAACACTGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: PIQGSECVGERP*PLYSSDENTEA Trigger: AGCCTCAGTGTTCTCATCTGAAGAATAGAGTGGGCAAGGCCTTTCTCCTACACACTCAGAGCCCTGAATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000549830.2 ENST00000656394.1 ENST00000667981.1 ENST00000668114.1 ENST00000668621.1 |
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| CDS GCA 72 bp | AACTGGAGGTTCTCGTTGCCTAAATCTCTCCTGGCTTaGTGCACATGGAACCCATTTCTTCCCATTCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: NWRFSLPKSLLA*CTWNPFLPIQG Trigger: GCCCTGAATGGGAAGAAATGGGTTCCATGTGCAGCAAGCCAGGAGAGATTTAGGCAACGAGAACCTCCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000549830.2 ENST00000653127.1 ENST00000656394.1 ENST00000656951.1 ENST00000663735.1 ENST00000665995.1 ENST00000667021.1 ENST00000667981.1 ENST00000668114.1 ENST00000668621.1 ENST00000669247.1 ENST00000669936.1 |
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| CDS GCA 72 bp | AGCTGGTCATGCGCAGAGAAGAATCTTCCAAATGGCTaGCTAGAATGTGCAAGCTTGGCTTCCAGCATTCCC | + |
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Preference number: 6 (lower is better) Translates to: SWSCAEKNLPNG*LECASLASSIP Trigger: GGGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTTCTCTGCGCATGACCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653127.1 ENST00000663735.1 ENST00000667981.1 |
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| CDS CCA 72 bp | TTCTCGTTGCCTAAATCTCTCCTGGCTTGCTGCACATaGAACCCATTTCTTCCCATTCAGGGCTCTCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: FSLPKSLLACCT*NPFLPIQGSPQ Trigger: TTGGGGAGAGCCCTGAATGGGAAGAAATGGGTTCCATGTGCAGCAAGCCAGGAGAGATTTAGGCAACGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000656951.1 ENST00000663735.1 ENST00000665995.1 ENST00000667021.1 ENST00000669247.1 ENST00000669936.1 |
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| CDS CAA 72 bp | AAGCTGGGAACCCTAAGACAGAACTGGAGGTTCTCGTaGCCTAAATCTCTCCTGGCTTGCTGCACATGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: KLGTLRQNWRFS*PKSLLACCTWN Trigger: GTTCCATGTGCAGCAAGCCAGGAGAGATTTAGGCAACGAGAACCTCCAGTTCTGTCTTAGGGTTCCCAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000549830.2 ENST00000653127.1 ENST00000656394.1 ENST00000656951.1 ENST00000663735.1 ENST00000665995.1 ENST00000667021.1 ENST00000667981.1 ENST00000668114.1 ENST00000668621.1 ENST00000669247.1 ENST00000669936.1 |
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| CDS CAA 72 bp | AAGAATCTTCCAAATGGCTGCCTAGAATGTGCAAGCTaGGCTTCCAGCATTCTCAGTTCCTCGGGTGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: KNLPNGCLECAS*ASSILSSSGGP Trigger: GGGACCACCCGAGGAACTGAGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640420.1 |
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| CDS GCA 72 bp | CAAGCTTGGCTTCCAGCATTCCATGTTTTTGGCATTTaGACCCATATCACCAAGGCTTCTTCAGCACAGCCC | + |
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Preference number: 6 (lower is better) Translates to: QAWLPAFHVFGI*THITKASSAQP Trigger: GGGCTGTGCTGAAGAAGCCTTGGTGATATGGGTGCAAATGCCAAAAACATGGAATGCTGGAAGCCAAGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000549830.2 ENST00000667021.1 ENST00000668114.1 |
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| CDS GCA 72 bp | AGCTGGTCATGCGCAGAGAAGAATCTTCCAAATGGCTaGCTAGAATGTGCAAGCTTGGCTTCCAGCATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SWSCAEKNLPNG*LECASLASSIP Trigger: TGGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTTCTCTGCGCATGACCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000549830.2 ENST00000667021.1 ENST00000668114.1 |
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| CDS GCA 72 bp | AGCTGGTCATGCGCAGAGAAGAATCTTCCAAATGGCTaGCTAGAATGTGCAAGCTTGGCTTCCAGCATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SWSCAEKNLPNG*LECASLASSIL Trigger: GAGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTTCTCTGCGCATGACCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000640420.1 ENST00000656394.1 ENST00000669936.1 |
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| CDS GCA 72 bp | GGCTTCCAGCATTCTGAGTGTGTAGGAGAAAGGCCTTaGCCACTCTATTCTTCAGATGAGAACACTGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GFQHSECVGERP*PLYSSDENTEA Trigger: AGCCTCAGTGTTCTCATCTGAAGAATAGAGTGGGCAAGGCCTTTCTCCTACACACTCAGAATGCTGGAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658977.1 |
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| CDS GCA 72 bp | AGCTGGTCATGCGCAGAGAAGAATCTTCCAAATGGCTaGCTAGAATGTGCAAGCTTGGCTTCCAGCATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SWSCAEKNLPNG*LECASLASSIL Trigger: CAGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTTCTCTGCGCATGACCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658977.1 |
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| CDS CCA 72 bp | GACAGAACTGGAGGTTCTCGTTGCCTAAATCTCTCCTaGCTTGCTGCACATGGAACCCATTTCTTCCCATTC | + |
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Preference number: 6 (lower is better) Translates to: DRTGGSRCLNLS*LAAHGTHFFPF Trigger: GAATGGGAAGAAATGGGTTCCATGTGCAGCAAGCCAGGAGAGATTTAGGCAACGAGAACCTCCAGTTCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000549830.2 ENST00000653127.1 ENST00000656394.1 ENST00000656951.1 ENST00000663735.1 ENST00000665995.1 ENST00000667021.1 ENST00000667981.1 ENST00000668114.1 ENST00000668621.1 ENST00000669247.1 ENST00000669936.1 |
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| CDS CCA 72 bp | CAGCACAGCCCGCCTTGGGAAGGCTGGATATCACAATaGGTAGAGCAGAGATTTCAGAGTCAAAGATATCCA | + |
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Preference number: 6 (lower is better) Translates to: QHSPPWEGWISQ*VEQRFQSQRYP Trigger: TGGATATCTTTGACTCTGAAATCTCTGCTCTACCCATTGTGATATCCAGCCTTCCCAAGGCGGGCTGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661213.1 ENST00000668114.1 |
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| CDS CAA 72 bp | GCAAGCTTGGCTTCCAGCATTCCATGTTTTTGGCATTaGCACCCATATCACCAAGGCTTCTTCAGCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: ASLASSIPCFWH*HPYHQGFFSTA Trigger: GGCTGTGCTGAAGAAGCCTTGGTGATATGGGTGCAAATGCCAAAAACATGGAATGCTGGAAGCCAAGCTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000549830.2 ENST00000667021.1 ENST00000668114.1 |
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| CDS CAA 90 bp | ACAAGGAGAAAGCTGGGAACCCTAAGACAGAACTGGAGGTTCTCGTaGCCTAAATCTCTCCTGGCTTGCTGCACATGGAACCCATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: TRRKLGTLRQNWRFS*PKSLLACCTWNPFL Trigger: AAGAAATGGGTTCCATGTGCAGCAAGCCAGGAGAGATTTAGGCAACGAGAACCTCCAGTTCTGTCTTAGGGTTCCCAGCTTTCTCCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000549830.2 ENST00000653127.1 ENST00000656394.1 ENST00000656951.1 ENST00000663735.1 ENST00000665995.1 ENST00000667021.1 ENST00000667981.1 ENST00000668114.1 ENST00000668621.1 ENST00000669247.1 ENST00000669936.1 |
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| CDS CAA 90 bp | TGCGCAGAGAAGAATCTTCCAAATGGCTGCCTAGAATGTGCAAGCTaGGCTTCCAGCATTCCCACATGGAAGACAGTGACTCACACAGAT | + |
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Preference number: 6 (lower is better) Translates to: CAEKNLPNGCLECAS*ASSIPTWKTVTHTD Trigger: ATCTGTGTGAGTCACTGTCTTCCATGTGGGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTTCTCTGCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653127.1 ENST00000663735.1 ENST00000667981.1 |
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| CDS GCA 72 bp | AGCTGGTCATGCGCAGAGAAGAATCTTCCAAATGGCTaGCTAGAATGTGCAAGCTTGGCTTCCAGCATTATC | + |
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Preference number: 6 (lower is better) Translates to: SWSCAEKNLPNG*LECASLASSII Trigger: GATAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTTCTCTGCGCATGACCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000661213.1 ENST00000665995.1 ENST00000669247.1 |
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| CDS GCA 72 bp | AGCTGGTCATGCGCAGAGAAGAATCTTCCAAATGGCTaGCTAGAATGTGCAAGCTTGGCTTCCAGCATTCAT | + |
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Preference number: 6 (lower is better) Translates to: SWSCAEKNLPNG*LECASLASSIH Trigger: ATGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTTCTCTGCGCATGACCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656951.1 ENST00000668621.1 |
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| CDS CCA 72 bp | GAGGCATGTCCACCTCGGCGAACTAAACTGTTCACATaGAGAAATCACAGTGCCAATGTTTCGGGGTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: EACPPRRTKLFT*RNHSANVSGFF Trigger: GAAAAACCCCGAAACATTGGCACTGTGATTTCTCCATGTGAACAGTTTAGTTCGCCGAGGTGGACATGCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 15 transcripts: ENST00000549830.2 ENST00000640420.1 ENST00000653127.1 ENST00000656394.1 ENST00000656951.1 ENST00000658977.1 ENST00000661213.1 ENST00000663735.1 ENST00000665995.1 ENST00000667021.1 ENST00000667981.1 ENST00000668114.1 ENST00000668621.1 ENST00000669247.1 ENST00000669936.1 |
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| CDS CAA 90 bp | TGCGCAGAGAAGAATCTTCCAAATGGCTGCCTAGAATGTGCAAGCTaGGCTTCCAGCATTCCATGTTTTTGGCATTTGCACCCATATCAC | + |
|
Preference number: 6 (lower is better) Translates to: CAEKNLPNGCLECAS*ASSIPCFWHLHPYH Trigger: GTGATATGGGTGCAAATGCCAAAAACATGGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTTCTCTGCGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000549830.2 ENST00000667021.1 ENST00000668114.1 |
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| CDS CCA 72 bp | GAATGTGCAAGCTTGGCTTCCAGCATTCCATGTTTTTaGCATTTGCACCCATATCACCAAGGCTTCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ECASLASSIPCF*HLHPYHQGFFS Trigger: GCTGAAGAAGCCTTGGTGATATGGGTGCAAATGCCAAAAACATGGAATGCTGGAAGCCAAGCTTGCACATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000549830.2 ENST00000667021.1 ENST00000668114.1 |
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| CDS CAA 72 bp | AAGAATCTTCCAAATGGCTGCCTAGAATGTGCAAGCTaGGCTTCCAGCATTCCCACATGGAAGACAGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: KNLPNGCLECAS*ASSIPTWKTVT Trigger: AGTCACTGTCTTCCATGTGGGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653127.1 ENST00000663735.1 ENST00000667981.1 |
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| CDS CAA 72 bp | AAGAATCTTCCAAATGGCTGCCTAGAATGTGCAAGCTaGGCTTCCAGCATTCATAAGGGCCTCAGCAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: KNLPNGCLECAS*ASSIHKGLSNL Trigger: CAAGTTGCTGAGGCCCTTATGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656951.1 ENST00000668621.1 |
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| CDS CCA 72 bp | GTTTCTTTATCTCTAGTGTCAGGAAAATGCCCCACATaGAAGACAGTGACTCACACAGATGAGCCTGCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: VSLSLVSGKCPT*KTVTHTDEPAR Trigger: TCTAGCAGGCTCATCTGTGTGAGTCACTGTCTTCCATGTGGGGCATTTTCCTGACACTAGAGATAAAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668114.1 |
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| CDS CAA 72 bp | AAGAATCTTCCAAATGGCTGCCTAGAATGTGCAAGCTaGGCTTCCAGCATTCCATGTTTTTGGCATTTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: KNLPNGCLECAS*ASSIPCFWHLH Trigger: GTGCAAATGCCAAAAACATGGAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000549830.2 ENST00000667021.1 ENST00000668114.1 |
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| CDS CAA 72 bp | AAGAATCTTCCAAATGGCTGCCTAGAATGTGCAAGCTaGGCTTCCAGCATTATCTGTAATCCCAGCACTTTG | + |
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Preference number: 6 (lower is better) Translates to: KNLPNGCLECAS*ASSIICNPSTL Trigger: CAAAGTGCTGGGATTACAGATAATGCTGGAAGCCAAGCTTGCACATTCTAGGCAGCCATTTGGAAGATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000661213.1 ENST00000665995.1 ENST00000669247.1 |
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