Pregenerated sensors for LINC00588 (Homo sapiens)

Ensembl gene IDs: ENSG00000215117

Ensembl transcript IDs: ENST00000521663.2, ENST00000632759.1

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 72 bp	GTGCTGGGGACTGTGCAGCAGCCTAAATCCGATGGCTaGGCAGCGAGTTCCCGCCCTGTAGCTGCCAGGCCA	+
Preference number: 6 (lower is better) Translates to: VLGTVQQPKSDG*AASSRPVAARP Trigger: TGGCCTGGCAGCTACAGGGCGGGAACTCGCTGCTCAGCCATCGGATTTAGGCTGCTGCACAGTCCCCAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000521663.2 ENST00000632759.1
CDS GCA 72 bp	GCGCCCAGAGAACGAGGTCGCCAGTGCTGGGGACTGTaGAGCAGCCTAAATCCGATGGCTGAGCAGCGAGTT	+
Preference number: 6 (lower is better) Translates to: APRERGRQCWGL*SSLNPMAEQRV Trigger: AACTCGCTGCTCAGCCATCGGATTTAGGCTGCTGCACAGTCCCCAGCACTGGCGACCTCGTTCTCTGGGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000521663.2 ENST00000632759.1
CDS GCA 72 bp	AGGTGGGCACAATGGCAAACTGGAGACCACAGACTTTaGGTGAAGCTACAGCCTCTTCATAGCACACCAAAC	+
Preference number: 6 (lower is better) Translates to: RWAQWQTGDHRL*VKLQPLHSTPN Trigger: GTTTGGTGTGCTATGAAGAGGCTGTAGCTTCACGCAAAGTCTGTGGTCTCCAGTTTGCCATTGTGCCCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521663.2
CDS TCA 72 bp	GGGCACAATGGCAAACTGGAGACCACAGACTTTGCGTaGAGCTACAGCCTCTTCATAGCACACCAAACAGTA	+
Preference number: 6 (lower is better) Translates to: GHNGKLETTDFA*SYSLFIAHQTV Trigger: TACTGTTTGGTGTGCTATGAAGAGGCTGTAGCTTCACGCAAAGTCTGTGGTCTCCAGTTTGCCATTGTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521663.2
CDS GCA 72 bp	GATTTCTATCTAAACCAACAGATTCTTGAGGGCAGCTaGTGTATCTTTTATCTGTTTATCCTCAAACCCTAT	+
Preference number: 6 (lower is better) Translates to: DFYLNQQILEGS*CIFYLFILKPY Trigger: ATAGGGTTTGAGGATAAACAGATAAAAGATACAGCAGCTGCCCTCAAGAATCTGTTGGTTTAGATAGAAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521663.2

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