Pregenerated sensors for LINC00587 (Homo sapiens)

Ensembl gene IDs: ENSG00000204250

Ensembl transcript IDs: ENST00000374801.3

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 72 bp	CTTTATTGCATCATTGGTATCGGTCTGAATCCTTGGTaGTCCGTCTGGGAATGCAGCACAGTAGGTCTCAGC	+
Preference number: 6 (lower is better) Translates to: LYCIIGIGLNPW*SVWECSTVGLS Trigger: GCTGAGACCTACTGTGCTGCATTCCCAGACGGATCACCAAGGATTCAGACCGATACCAATGATGCAATAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374801.3
CDS CAA 72 bp	TACGGTCACCCATACCATAAGCATTCAAGATTTCTATaGTCCACCCGGAAGGATGGAGCCAGTCAGCAAACT	+
Preference number: 6 (lower is better) Translates to: YGHPYHKHSRFL*STRKDGASQQT Trigger: AGTTTGCTGACTGGCTCCATCCTTCCGGGTGGACAATAGAAATCTTGAATGCTTATGGTATGGGTGACCGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374801.3
CDS CAA 90 bp	GGAAAAATGATGTCTTTATTGCATCATTGGTATCGGTCTGAATCCTaGGTGATCCGTCTGGGAATGCAGCACAGTAGGTCTCAGCCTCAT	+
Preference number: 6 (lower is better) Translates to: GKMMSLLHHWYRSES*VIRLGMQHSRSQPH Trigger: ATGAGGCTGAGACCTACTGTGCTGCATTCCCAGACGGATCACCAAGGATTCAGACCGATACCAATGATGCAATAAAGACATCATTTTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374801.3
CDS TCA 72 bp	GCATCTCCATGGCTACCACAACAGGATAATTTTATCTaGAAAAGTAGTTCTGCATGGCTGGAGAGGCCTCAG	+
Preference number: 6 (lower is better) Translates to: ASPWLPQQDNFI*KSSSAWLERPQ Trigger: CTGAGGCCTCTCCAGCCATGCAGAACTACTTTTTCAGATAAAATTATCCTGTTGTGGTAGCCATGGAGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374801.3
CDS CCA 72 bp	GGTCTCAGCCTCATTTCACCCAGCTCCTTTTCAAGATaGAGTTGTTCTGGTGTAAAAGCCTCCTTAGACATT	+
Preference number: 6 (lower is better) Translates to: GLSLISPSSFSR*SCSGVKASLDI Trigger: AATGTCTAAGGAGGCTTTTACACCAGAACAACTCCATCTTGAAAAGGAGCTGGGTGAAATGAGGCTGAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374801.3
CDS CAA 72 bp	ATGTCTTTATTGCATCATTGGTATCGGTCTGAATCCTaGGTGATCCGTCTGGGAATGCAGCACAGTAGGTCT	+
Preference number: 6 (lower is better) Translates to: MSLLHHWYRSES*VIRLGMQHSRS Trigger: AGACCTACTGTGCTGCATTCCCAGACGGATCACCAAGGATTCAGACCGATACCAATGATGCAATAAAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374801.3
CDS CAA 90 bp	TTGTTCTTTTACGGTCACCCATACCATAAGCATTCAAGATTTCTATaGTCCACCCGGAAGGATGGAGCCAGTCAGCAAACTGCATTCTTC	+
Preference number: 6 (lower is better) Translates to: LFFYGHPYHKHSRFL*STRKDGASQQTAFF Trigger: GAAGAATGCAGTTTGCTGACTGGCTCCATCCTTCCGGGTGGACAATAGAAATCTTGAATGCTTATGGTATGGGTGACCGTAAAAGAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374801.3
CDS TCA 72 bp	AAAAATGATGTCTTTATTGCATCATTGGTATCGGTCTaGATCCTTGGTGATCCGTCTGGGAATGCAGCACAG	+
Preference number: 6 (lower is better) Translates to: KNDVFIASLVSV*ILGDPSGNAAQ Trigger: CTGTGCTGCATTCCCAGACGGATCACCAAGGATTCAGACCGATACCAATGATGCAATAAAGACATCATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374801.3

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