Pregenerated sensors for LINC00578 (Homo sapiens)
Ensembl gene IDs: ENSG00000228221Ensembl transcript IDs: ENST00000439009.1, ENST00000442937.6, ENST00000445673.1, ENST00000446548.1, ENST00000656037.1, ENST00000657906.1, ENST00000660801.1, ENST00000661409.1, ENST00000661450.1, ENST00000665837.1, ENST00000668730.1, ENST00000671331.1
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AACACAGCAGGATCCCCACACTGCAAGAGGCCTAGGCCATGGCTCTaGACTCAAACAGCCTCAAAGTGGTTCCCAGACTGTCTCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NTAGSPHCKRPRPWL*TQTASKWFPDCLRR Trigger: TCTCCTGAGACAGTCTGGGAACCACTTTGAGGCTGTTTGAGTCCAGAGCCATGGCCTAGGCCTCTTGCAGTGTGGGGATCCTGCTGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS TCA 90 bp | GGTCATCCAGGGCCACTGCATCAAATTTCAGCAGCTGAATGGTGCTaGACTAAATTTGTGCGCTCCAGGATGGGCTGGAGGTCCCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: GHPGPLHQISAAEWC*TKFVRSRMGWRSPH Trigger: GTGTGGGGACCTCCAGCCCATCCTGGAGCGCACAAATTTAGTTCAGCACCATTCAGCTGCTGAAATTTGATGCAGTGGCCCTGGATGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS CCA 90 bp | TTTCACTTGTTTATCAAGTCACAGCTGTGTTCCAGGTGGTGTTTCTaGCAGCCACTCCCAGAGCCCCTGGAACTCTGGCCCAAGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FHLFIKSQLCSRWCF*QPLPEPLELWPKAL Trigger: GAGAGCCTTGGGCCAGAGTTCCAGGGGCTCTGGGAGTGGCTGCCAGAAACACCACCTGGAACACAGCTGTGACTTGATAAACAAGTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661450.1 |
||
| CDS CCA 90 bp | TTTCAGCAGCTGAATGGTGCTGAACTAAATTTGTGCGCTCCAGGATaGGCTGGAGGTCCCCACACTAAATGTATGCAGACCCCTGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FQQLNGAELNLCAPG*AGGPHTKCMQTPVL Trigger: CAGCACAGGGGTCTGCATACATTTAGTGTGGGGACCTCCAGCCCATCCTGGAGCGCACAAATTTAGTTCAGCACCATTCAGCTGCTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS TCA 90 bp | GGCATCCCAGCTTGTGAATCAGTTGTCCTACTTTCACCTGCACTTTaGATTCAGCATGTCAGATGCTGGCTGGGCTCCAGTGTCCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GIPACESVVLLSPAL*IQHVRCWLGSSVLS Trigger: TGAGAGGACACTGGAGCCCAGCCAGCATCTGACATGCTGAATTCAAAGTGCAGGTGAAAGTAGGACAACTGATTCACAAGCTGGGATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000446548.1 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS TCA 90 bp | GCACTCCAGCCTGCCCGGGCCTGGGAGCATTTACATTTGTACCACTaGATAGCTGTTCTCCATCATCCCATTTGGTCTTCAGACTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: ALQPARAWEHLHLYH*IAVLHHPIWSSDSI Trigger: TATGGAGTCTGAAGACCAAATGGGATGATGGAGAACAGCTATTCAGTGGTACAAATGTAAATGCTCCCAGGCCCGGGCAGGCTGGAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657906.1 |
||
| CDS CCA 90 bp | AGCATGTCAGATGCTGGCTGGGCTCCAGTGTCCTCTCATACACCATaGTGCGTGTCCTTTGAGAAATTTGTTTTCCCCTCACCACACCAA | + |
|
Preference number: 5 (lower is better) Translates to: SMSDAGWAPVSSHTP*CVSFEKFVFPSPHQ Trigger: TTGGTGTGGTGAGGGGAAAACAAATTTCTCAAAGGACACGCACCATGGTGTATGAGAGGACACTGGAGCCCAGCCAGCATCTGACATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000445673.1 ENST00000446548.1 ENST00000656037.1 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS CCA 90 bp | TCCTACTTTCACCTGCACTTTGAATTCAGCATGTCAGATGCTGGCTaGGCTCCAGTGTCCTCTCATACACCATGGTGCGTGTCCTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SYFHLHFEFSMSDAG*APVSSHTPWCVSFE Trigger: CTCAAAGGACACGCACCATGGTGTATGAGAGGACACTGGAGCCCAGCCAGCATCTGACATGCTGAATTCAAAGTGCAGGTGAAAGTAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000445673.1 ENST00000446548.1 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS CCA 90 bp | CATCTCTGTCTTCTGCACTTTGAATTCAGCATGTCAGATGCTGGCTaGGCTCCAGTGTCCTCTCATACACCATGGTGCGTGTCCTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HLCLLHFEFSMSDAG*APVSSHTPWCVSFE Trigger: CTCAAAGGACACGCACCATGGTGTATGAGAGGACACTGGAGCCCAGCCAGCATCTGACATGCTGAATTCAAAGTGCAGAAGACAGAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656037.1 |
||
| CDS GCA 90 bp | ATGTCAGATGCTGGCTGGGCTCCAGTGTCCTCTCATACACCATGGTaGGTGTCCTTTGAGAAATTTGTTTTCCCCTCACCACACCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: MSDAGWAPVSSHTPW*VSFEKFVFPSPHQR Trigger: TCTTTGGTGTGGTGAGGGGAAAACAAATTTCTCAAAGGACACGCACCATGGTGTATGAGAGGACACTGGAGCCCAGCCAGCATCTGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000445673.1 ENST00000446548.1 ENST00000656037.1 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS TCA 90 bp | GGTGGTGTTTCTGCCCGGGCCTGGGAGCATTTACATTTGTACCACTaGATAGCTGTTCTCCATCATCCCATTTGGTCTTCAGACTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: GGVSARAWEHLHLYH*IAVLHHPIWSSDSI Trigger: TATGGAGTCTGAAGACCAAATGGGATGATGGAGAACAGCTATTCAGTGGTACAAATGTAAATGCTCCCAGGCCCGGGCAGAAACACCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661409.1 |
||
| CDS GCA 90 bp | CTCAATGTCACCTTTTTGCTCAACCATCCTCAGCGTGGTTTCCTGTaGTCATCTCACTGCTTTCATGGACCCAGAAGGCATCAGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LNVTFLLNHPQRGFL*SSHCFHGPRRHQSF Trigger: GAAACTCTGATGCCTTCTGGGTCCATGAAAGCAGTGAGATGAGCACAGGAAACCACGCTGAGGATGGTTGAGCAAAAAGGTGACATTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000656037.1 ENST00000665837.1 |
||
| CDS GCA 90 bp | CCCTGTGCTGATCTAATTAGTGAGGTGTCTGCCTGTCACAGCCCATaGAAGAGAATTGCATGGACAGAATTACTGCTGGGCCAAGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: PCADLISEVSACHSP*KRIAWTELLLGQVN Trigger: ATTGACTTGGCCCAGCAGTAATTCTGTCCATGCAATTCTCTTGCATGGGCTGTGACAGGCAGACACCTCACTAATTAGATCAGCACAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS CCA 90 bp | ATTAGTGAGGTGTCTGCCTGTCACAGCCCATGCAAGAGAATTGCATaGACAGAATTACTGCTGGGCCAAGTCAATATCAGGGTTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ISEVSACHSPCKRIA*TELLLGQVNIRVSP Trigger: GGGAGAAACCCTGATATTGACTTGGCCCAGCAGTAATTCTGTCCATGCAATTCTCTTGCATGGGCTGTGACAGGCAGACACCTCACTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS TCA 90 bp | TGGCTGGGCTCCAGTGTCCTCTCATACACCATGGTGCGTGTCCTTTaGGAAATTTGTTTTCCCCTCACCACACCAAAGAATGTTTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: WLGSSVLSYTMVRVL*EICFPLTTPKNVSL Trigger: AAGTGAAACATTCTTTGGTGTGGTGAGGGGAAAACAAATTTCTCAAAGGACACGCACCATGGTGTATGAGAGGACACTGGAGCCCAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000445673.1 ENST00000446548.1 ENST00000656037.1 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS TCA 90 bp | CAAACAGCCTCAAAGTGGTTCCCAGACTGTCTCAGGAGAGCAAAATaGCCTAGAGTGACACAAAGAGACCTTGTGAGTGGGAGTAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QTASKWFPDCLRRAK*PRVTQRDLVSGSKE Trigger: TTCCTTACTCCCACTCACAAGGTCTCTTTGTGTCACTCTAGGTCATTTTGCTCTCCTGAGACAGTCTGGGAACCACTTTGAGGCTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS GCA 90 bp | TTTTTGCTCAACCATCCTCAGCGTGGTTTCCTGTGCTCATCTCACTaGTTTCATGGACCCAGAAGGCATCAGAGTTTCAGGTGTCATAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLLNHPQRGFLCSSH*FHGPRRHQSFRCHK Trigger: CTTATGACACCTGAAACTCTGATGCCTTCTGGGTCCATGAAAGCAGTGAGATGAGCACAGGAAACCACGCTGAGGATGGTTGAGCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000656037.1 ENST00000665837.1 |
||
| CDS GCA 90 bp | TCACTTCTAAGTTCTGATAGGATTTACGTGATGCTGAGGACAAGATaGCAAAGCCTCCTCGTTCTCCAACAGCTTCATGCTTGGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLSSDRIYVMLRTR*QSLLVLQQLHAWHQ Trigger: CTGGTGCCAAGCATGAAGCTGTTGGAGAACGAGGAGGCTTTGGCATCTTGTCCTCAGCATCACGTAAATCCTATCAGAACTTAGAAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS GCA 90 bp | TTTCACTTGTTTATCAAGTCACAGCTGTGTTCCAGGTGGTGTTTCTaGCCGGGCCTGGGAGCATTTACATTTGTACCACTGAATAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FHLFIKSQLCSRWCF*PGLGAFTFVPLNSC Trigger: ACAGCTATTCAGTGGTACAAATGTAAATGCTCCCAGGCCCGGGCAGAAACACCACCTGGAACACAGCTGTGACTTGATAAACAAGTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661409.1 |
||
| CDS TCA 90 bp | TTTCTCTTTTCTGCCCGGGCCTGGGAGCATTTACATTTGTACCACTaGATAGCTGTTCTCCATCATCCCATTTGGTCTTCAGACTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: FLFSARAWEHLHLYH*IAVLHHPIWSSDSI Trigger: TATGGAGTCTGAAGACCAAATGGGATGATGGAGAACAGCTATTCAGTGGTACAAATGTAAATGCTCCCAGGCCCGGGCAGAAAAGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000442937.6 ENST00000661450.1 ENST00000665837.1 ENST00000671331.1 |
||
| CDS TCA 90 bp | ACTCTATGTCTGAAGGCAGGTGGAAGCATGGGACGAACAGTACATTaGGAATCAGGCAACCAGGAATCCATTTCTGTGACTGATCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TLCLKAGGSMGRTVH*ESGNQESISVTDQV Trigger: AACTTGATCAGTCACAGAAATGGATTCCTGGTTGCCTGATTCTCAATGTACTGTTCGTCCCATGCTTCCACCTGCCTTCAGACATAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657906.1 |
||
| CDS GCA 90 bp | ATTCTGGGACAAAACCAGACTAAGGAGCAAAAGCAGGAAGGTAAATaGAGGAAGGTCCAAAGGACAGATATAGAACCAGGTAAAGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILGQNQTKEQKQEGK*RKVQRTDIEPGKGW Trigger: CCACCCTTTACCTGGTTCTATATCTGTCCTTTGGACCTTCCTGCATTTACCTTCCTGCTTTTGCTCCTTAGTCTGGTTTTGTCCCAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS TCA 90 bp | GACGAACAGTACATTGAGAATCAGGCAACCAGGAATCCATTTCTGTaGCTGATCAAGTTACCAAAATTTTCCTGGCCTCGGCTTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DEQYIENQATRNPFL*LIKLPKFSWPRLPH Trigger: ATGAGGAAGCCGAGGCCAGGAAAATTTTGGTAACTTGATCAGTCACAGAAATGGATTCCTGGTTGCCTGATTCTCAATGTACTGTTCGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657906.1 |
||
| CDS TCA 90 bp | GACATTGACATTGTCTTTATCTTCATTATCTTCATCGCAGATCGTTaGTTCTCCAAGTTGGGTCCTCTAGCAGTCTCCCTCAGAACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: DIDIVFIFIIFIADR*FSKLGPLAVSLRTH Trigger: GTGAGTTCTGAGGGAGACTGCTAGAGGACCCAACTTGGAGAATCAACGATCTGCGATGAAGATAATGAAGATAAAGACAATGTCAATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS TCA 90 bp | AACAGTACATTGAGAATCAGGCAACCAGGAATCCATTTCTGTGACTaGTCAAGTTACCAAAATTTTCCTGGCCTCGGCTTCCTCATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: NSTLRIRQPGIHFCD*SSYQNFPGLGFLIC Trigger: ACAAATGAGGAAGCCGAGGCCAGGAAAATTTTGGTAACTTGATCAGTCACAGAAATGGATTCCTGGTTGCCTGATTCTCAATGTACTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657906.1 |
||
| CDS CCA 90 bp | TCCCATTCCAGTGACAGGTTAGCACTCCAACTGTTGCTGATCTGTTaGAATTTCCTGTTTCCTCTTCCATGGAAATGTTTTCTCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SHSSDRLALQLLLIC*NFLFPLPWKCFLFL Trigger: CAAAAAGAGAAAACATTTCCATGGAAGAGGAAACAGGAAATTCCAACAGATCAGCAACAGTTGGAGTGCTAACCTGTCACTGGAATGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445673.1 |
||
| CDS CCA 90 bp | TCCCATTCCAGTGACAGGTTAGCACTCCAACTGTTGCTGATCTGTTaGAATTTCCTGTTTCCTCTTCCATGGAAATGTTTTCTCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SHSSDRLALQLLLIC*NFLFPLPWKCFLFS Trigger: AGAAAAGAGAAAACATTTCCATGGAAGAGGAAACAGGAAATTCCAACAGATCAGCAACAGTTGGAGTGCTAACCTGTCACTGGAATGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000442937.6 ENST00000656037.1 ENST00000661450.1 ENST00000665837.1 ENST00000671331.1 |
||
| CDS GCA 90 bp | ATACTGAATGTAATGTGGCATCCTGAATGGGATTCCCTTGAGCTATaGAAGTTTGAAGAAAACTCCAAAGTATCTGTTCTGTCCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ILNVMWHPEWDSLEL*KFEENSKVSVLSSE Trigger: CTCTGAGGACAGAACAGATACTTTGGAGTTTTCTTCAAACTTGCATAGCTCAAGGGAATCCCATTCAGGATGCCACATTACATTCAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661450.1 ENST00000671331.1 |
||
| CDS TCA 90 bp | CTTGCACAGTCACTTCTGCTCTGGAAGCTTCTTAAAGGGTCCTTATaGTTTTGGACGCTGACATTGACATTGTCTTTATCTTCATTATCT | + |
|
Preference number: 5 (lower is better) Translates to: LAQSLLLWKLLKGSL*FWTLTLTLSLSSLS Trigger: AGATAATGAAGATAAAGACAATGTCAATGTCAGCGTCCAAAATCATAAGGACCCTTTAAGAAGCTTCCAGAGCAGAAGTGACTGTGCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000442937.6 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS TCA 90 bp | ATGGCTTCTCATACCAGAGAAGTTGACACAATTGTTAGTCATCTGTaGCCAATTTTTGGAAGCTGTGAAAATGGAACCAAGTGTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: MASHTREVDTIVSHL*PIFGSCENGTKCPL Trigger: AAGTGGACACTTGGTTCCATTTTCACAGCTTCCAAAAATTGGTCACAGATGACTAACAATTGTGTCAACTTCTCTGGTATGAGAAGCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS TCA 90 bp | ACCTCAGAAGCCCAAAACTCAATATATTCAAAAGCAAGGAAATTCTaGGATACTGTCACAGCCCATAGGAGTCTAAGAAGACATACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSEAQNSIYSKARKF*DTVTAHRSLRRHTE Trigger: TTCAGTATGTCTTCTTAGACTCCTATGGGCTGTGACAGTATCTCAGAATTTCCTTGCTTTTGAATATATTGAGTTTTGGGCTTCTGAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661450.1 |
||
| CDS CCA 72 bp | CCAGGTGGTGTTTCTGGCAGCCACTCCCAGAGCCCCTaGAACTCTGGCCCAAGGCTCTCTGACTCCTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PGGVSGSHSQSP*NSGPRLSDSFS Trigger: CGAGAAGGAGTCAGAGAGCCTTGGGCCAGAGTTCCAGGGGCTCTGGGAGTGGCTGCCAGAAACACCACCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661450.1 |
||
| CDS CAA 72 bp | GGGAGGGCTCCCAGAGCTCCAGGAAATAGGTCAGGGTaGACAGCAGCAGCTGGTTTGCTCTGCCTTCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GRAPRAPGNRSG*TAAAGLLCLPH Trigger: GTGGGGAAGGCAGAGCAAACCAGCTGCTGCTGTCAACCCTGACCTATTTCCTGGAGCTCTGGGAGCCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS CAA 90 bp | CTCAGTGTGGGTTGGCTGCACAGCCGCCCAAAGGCAGCATCACTGTaGCTGAGAGCAGGGATGGGAGGGCTCCCAGAGCTCCAGGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: LSVGWLHSRPKAASL*LRAGMGGLPELQEI Trigger: TATTTCCTGGAGCTCTGGGAGCCCTCCCATCCCTGCTCTCAGCAACAGTGATGCTGCCTTTGGGCGGCTGTGCAGCCAACCCACACTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS TCA 72 bp | GCCCAAGGCTCTCTGACTCCTTCTCGGCTTAGCGGCTaGAGACTGATGCTGCCCGATCACCTCAGAAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: AQGSLTPSRLSG*RLMLPDHLRSP Trigger: TGGGCTTCTGAGGTGATCGGGCAGCATCAGTCTTCAGCCGCTAAGCCGAGAAGGAGTCAGAGAGCCTTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661450.1 |
||
| CDS CCA 72 bp | CCCCAAAGACACTGTGTCAATTCGGAGGACTCAGGATaGCTCCCTGCAGGCATCTCACAGGCTGGAGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PQRHCVNSEDSG*LPAGISQAGGG Trigger: TCCACCTCCAGCCTGTGAGATGCCTGCAGGGAGCCATCCTGAGTCCTCCGAATTGACACAGTGTCTTTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445673.1 |
||
| CDS CCA 72 bp | ACAGCAGGATCCCCACACTGCAAGAGGCCTAGGCCATaGCTCTGGACTCAAACAGCCTCAAAGTGGTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TAGSPHCKRPRP*LWTQTASKWFP Trigger: TGGGAACCACTTTGAGGCTGTTTGAGTCCAGAGCCATGGCCTAGGCCTCTTGCAGTGTGGGGATCCTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS CCA 72 bp | CACCTGCACTTTGAATTCAGCATGTCAGATGCTGGCTaGGCTCCAGTGTCCTCTCATACACCATGGTGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: HLHFEFSMSDAG*APVSSHTPWCV Trigger: CACGCACCATGGTGTATGAGAGGACACTGGAGCCCAGCCAGCATCTGACATGCTGAATTCAAAGTGCAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000445673.1 ENST00000446548.1 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS CCA 72 bp | GATCAGAAGAGACTTCCTCGAAGTTGGGGGATAAAGTaGGTGAGTCACGGTGATGAAGGGAGCCGCATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: DQKRLPRSWGIK*VSHGDEGSRMG Trigger: ACCCATGCGGCTCCCTTCATCACCGTGACTCACCCACTTTATCCCCCAACTTCGAGGAAGTCTCTTCTGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS TCA 72 bp | GGGCCACTGCATCAAATTTCAGCAGCTGAATGGTGCTaGACTAAATTTGTGCGCTCCAGGATGGGCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GPLHQISAAEWC*TKFVRSRMGWR Trigger: CCTCCAGCCCATCCTGGAGCGCACAAATTTAGTTCAGCACCATTCAGCTGCTGAAATTTGATGCAGTGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS CCA 72 bp | CTTCTGCACTTTGAATTCAGCATGTCAGATGCTGGCTaGGCTCCAGTGTCCTCTCATACACCATGGTGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLHFEFSMSDAG*APVSSHTPWCV Trigger: CACGCACCATGGTGTATGAGAGGACACTGGAGCCCAGCCAGCATCTGACATGCTGAATTCAAAGTGCAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656037.1 |
||
| CDS CAA 72 bp | TGGGTGAGTCACGGTGATGAAGGGAGCCGCATGGGTTaGGAAAGCAGACTGAGCTCTGCCACTTGTAGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: WVSHGDEGSRMG*ESRLSSATCSY Trigger: ATAACTACAAGTGGCAGAGCTCAGTCTGCTTTCCAAACCCATGCGGCTCCCTTCATCACCGTGACTCACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS CAA 90 bp | GCGACCGCGCCTGGTCGTGCATTGCCTAGACTTTATTGGCCCTTCTaGCACAGTCACTTCTGCTCTGGAAGCTTCTTAAAGGGTCCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: ATAPGRALPRLYWPF*HSHFCSGSFLKGPY Trigger: ATAAGGACCCTTTAAGAAGCTTCCAGAGCAGAAGTGACTGTGCAAGAAGGGCCAATAAAGTCTAGGCAATGCACGACCAGGCGCGGTCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000442937.6 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS CAA 90 bp | GTGACATTTAAGAAAATGACAGGGACAGCTATCACTCAGTGTGGGTaGGCTGCACAGCCGCCCAAAGGCAGCATCACTGTTGCTGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VTFKKMTGTAITQCG*AAQPPKGSITVAES Trigger: GCTCTCAGCAACAGTGATGCTGCCTTTGGGCGGCTGTGCAGCCAACCCACACTGAGTGATAGCTGTCCCTGTCATTTTCTTAAATGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS TCA 72 bp | TCTAGCAGTCTCCCTCAGAACTCACTGCTTCCAACCTaGTGTCAACTGTGCTGGGGAATGAATGAAGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSLPQNSLLPT*CQLCWGMNEGC Trigger: GCACCCTTCATTCATTCCCCAGCACAGTTGACATCAGGTTGGAAGCAGTGAGTTCTGAGGGAGACTGCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS TCA 72 bp | GTGGTGGAGGTGAGAGTAACAAAAGCCAAGTGCTCATaGGTCTGGAGACCCATTTGTCTGCAGTCTGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VVEVRVTKAKCS*VWRPICLQSAA Trigger: TGCAGCAGACTGCAGACAAATGGGTCTCCAGACTCATGAGCACTTGGCTTTTGTTACTCTCACCTCCACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS GCA 72 bp | AACCATCCTCAGCGTGGTTTCCTGTGCTCATCTCACTaGTTTCATGGACCCAGAAGGCATCAGAGTTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: NHPQRGFLCSSH*FHGPRRHQSFR Trigger: CCTGAAACTCTGATGCCTTCTGGGTCCATGAAAGCAGTGAGATGAGCACAGGAAACCACGCTGAGGATGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656037.1 ENST00000665837.1 |
||
| CDS CCA 72 bp | CTGAATGGTGCTGAACTAAATTTGTGCGCTCCAGGATaGGCTGGAGGTCCCCACACTAAATGTATGCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: LNGAELNLCAPG*AGGPHTKCMQT Trigger: GGTCTGCATACATTTAGTGTGGGGACCTCCAGCCCATCCTGGAGCGCACAAATTTAGTTCAGCACCATTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS CAA 72 bp | CTGGGCAGGTTAATCCAGTGGCTCAATGTCACCTTTTaGCTCAACCATCCTCAGCGTGGTTTCCTGTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LGRLIQWLNVTF*LNHPQRGFLCS Trigger: TGAGCACAGGAAACCACGCTGAGGATGGTTGAGCAAAAAGGTGACATTGAGCCACTGGATTAACCTGCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656037.1 ENST00000665837.1 |
||
| CDS CAA 90 bp | ATCCTGTTTCTGGGCAGGTTAATCCAGTGGCTCAATGTCACCTTTTaGCTCAACCATCCTCAGCGTGGTTTCCTGTGCTCATCTCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: ILFLGRLIQWLNVTF*LNHPQRGFLCSSHC Trigger: GCAGTGAGATGAGCACAGGAAACCACGCTGAGGATGGTTGAGCAAAAAGGTGACATTGAGCCACTGGATTAACCTGCCCAGAAACAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656037.1 ENST00000665837.1 |
||
| CDS TCA 72 bp | CCTGCCCGGGCCTGGGAGCATTTACATTTGTACCACTaGATAGCTGTTCTCCATCATCCCATTTGGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PARAWEHLHLYH*IAVLHHPIWSS Trigger: TGAAGACCAAATGGGATGATGGAGAACAGCTATTCAGTGGTACAAATGTAAATGCTCCCAGGCCCGGGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657906.1 |
||
| CDS GCA 72 bp | TTTATCAAGTCACAGCTGTGTTCCAGGTGGTGTTTCTaGCCGGGCCTGGGAGCATTTACATTTGTACCACTG | + |
|
Preference number: 6 (lower is better) Translates to: FIKSQLCSRWCF*PGLGAFTFVPL Trigger: CAGTGGTACAAATGTAAATGCTCCCAGGCCCGGGCAGAAACACCACCTGGAACACAGCTGTGACTTGATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661409.1 |
||
| CDS GCA 72 bp | ACCTTTTTGCTCAACCATCCTCAGCGTGGTTTCCTGTaGTCATCTCACTGCTTTCATGGACCCAGAAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: TFLLNHPQRGFL*SSHCFHGPRRH Trigger: ATGCCTTCTGGGTCCATGAAAGCAGTGAGATGAGCACAGGAAACCACGCTGAGGATGGTTGAGCAAAAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000656037.1 ENST00000665837.1 |
||
| CDS CAA 72 bp | GTGAGGTGTCTGCCTGTCACAGCCCATGCAAGAGAATaGCATGGACAGAATTACTGCTGGGCCAAGTCAATA | + |
|
Preference number: 6 (lower is better) Translates to: VRCLPVTAHARE*HGQNYCWAKSI Trigger: TATTGACTTGGCCCAGCAGTAATTCTGTCCATGCAATTCTCTTGCATGGGCTGTGACAGGCAGACACCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS CAA 90 bp | CTGGCTGGGCTCCAGTGTCCTCTCATACACCATGGTGCGTGTCCTTaGAGAAATTTGTTTTCCCCTCACCACACCAAAGAATGTTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: LAGLQCPLIHHGACP*RNLFSPHHTKECFT Trigger: AGTGAAACATTCTTTGGTGTGGTGAGGGGAAAACAAATTTCTCAAAGGACACGCACCATGGTGTATGAGAGGACACTGGAGCCCAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000445673.1 ENST00000446548.1 ENST00000656037.1 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS CAA 90 bp | GAGGACAAGATGCCAAAGCCTCCTCGTTCTCCAACAGCTTCATGCTaGGCACCAGCAATATCCCCAAAGAACTTAGATATTCCTCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: EDKMPKPPRSPTASC*APAISPKNLDIPPR Trigger: CCTTGGAGGAATATCTAAGTTCTTTGGGGATATTGCTGGTGCCAAGCATGAAGCTGTTGGAGAACGAGGAGGCTTTGGCATCTTGTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS TCA 72 bp | GCTTGTGAATCAGTTGTCCTACTTTCACCTGCACTTTaGATTCAGCATGTCAGATGCTGGCTGGGCTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ACESVVLLSPAL*IQHVRCWLGSS Trigger: ACTGGAGCCCAGCCAGCATCTGACATGCTGAATTCAAAGTGCAGGTGAAAGTAGGACAACTGATTCACAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000445673.1 ENST00000446548.1 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS TCA 72 bp | TCTGCCCGGGCCTGGGAGCATTTACATTTGTACCACTaGATAGCTGTTCTCCATCATCCCATTTGGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SARAWEHLHLYH*IAVLHHPIWSS Trigger: TGAAGACCAAATGGGATGATGGAGAACAGCTATTCAGTGGTACAAATGTAAATGCTCCCAGGCCCGGGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000442937.6 ENST00000661409.1 ENST00000661450.1 ENST00000665837.1 ENST00000671331.1 |
||
| CDS TCA 72 bp | CTGAAGGCAGGTGGAAGCATGGGACGAACAGTACATTaGGAATCAGGCAACCAGGAATCCATTTCTGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: LKAGGSMGRTVH*ESGNQESISVT Trigger: AGTCACAGAAATGGATTCCTGGTTGCCTGATTCTCAATGTACTGTTCGTCCCATGCTTCCACCTGCCTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657906.1 |
||
| CDS TCA 72 bp | TCAAAGTGGTTCCCAGACTGTCTCAGGAGAGCAAAATaGCCTAGAGTGACACAAAGAGACCTTGTGAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SKWFPDCLRRAK*PRVTQRDLVSG Trigger: CCCACTCACAAGGTCTCTTTGTGTCACTCTAGGTCATTTTGCTCTCCTGAGACAGTCTGGGAACCACTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS CCA 72 bp | TTATTCTTGGGTGATCAGAAGAGACTTCCTCGAAGTTaGGGGATAAAGTGGGTGAGTCACGGTGATGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LFLGDQKRLPRS*GIKWVSHGDEG Trigger: CCCTTCATCACCGTGACTCACCCACTTTATCCCCCAACTTCGAGGAAGTCTCTTCTGATCACCCAAGAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS CAA 72 bp | CCTGGTCGTGCATTGCCTAGACTTTATTGGCCCTTCTaGCACAGTCACTTCTGCTCTGGAAGCTTCTTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PGRALPRLYWPF*HSHFCSGSFLK Trigger: CTTTAAGAAGCTTCCAGAGCAGAAGTGACTGTGCAAGAAGGGCCAATAAAGTCTAGGCAATGCACGACCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000442937.6 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS CAA 90 bp | GCACACTGGCAAACAACAACACAGGCATCCCAGCTTGTGAATCAGTaGTCCTACTTTCACCTGCACTTTGAATTCAGCATGTCAGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: AHWQTTTQASQLVNQ*SYFHLHFEFSMSDA Trigger: AGCATCTGACATGCTGAATTCAAAGTGCAGGTGAAAGTAGGACAACTGATTCACAAGCTGGGATGCCTGTGTTGTTGTTTGCCAGTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000446548.1 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS GCA 72 bp | ACAGCCCATGCAAGAGAATTGCATGGACAGAATTACTaGTGGGCCAAGTCAATATCAGGGTTTCTCCCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: TAHARELHGQNY*WAKSISGFLPD Trigger: ATCAGGGAGAAACCCTGATATTGACTTGGCCCAGCAGTAATTCTGTCCATGCAATTCTCTTGCATGGGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS GCA 72 bp | AAGATGCCAAAGCCTCCTCGTTCTCCAACAGCTTCATaGTTGGCACCAGCAATATCCCCAAAGAACTTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: KMPKPPRSPTAS*LAPAISPKNLD Trigger: ATCTAAGTTCTTTGGGGATATTGCTGGTGCCAAGCATGAAGCTGTTGGAGAACGAGGAGGCTTTGGCATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS GCA 72 bp | AGTTCTGATAGGATTTACGTGATGCTGAGGACAAGATaGCAAAGCCTCCTCGTTCTCCAACAGCTTCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSDRIYVMLRTR*QSLLVLQQLHA Trigger: AGCATGAAGCTGTTGGAGAACGAGGAGGCTTTGGCATCTTGTCCTCAGCATCACGTAAATCCTATCAGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS CAA 72 bp | CTCCAGTGTCCTCTCATACACCATGGTGCGTGTCCTTaGAGAAATTTGTTTTCCCCTCACCACACCAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LQCPLIHHGACP*RNLFSPHHTKE Trigger: TTCTTTGGTGTGGTGAGGGGAAAACAAATTTCTCAAAGGACACGCACCATGGTGTATGAGAGGACACTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000445673.1 ENST00000446548.1 ENST00000656037.1 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS CCA 72 bp | TCTGAAGATATCCTGTTTCTGGGCAGGTTAATCCAGTaGCTCAATGTCACCTTTTTGCTCAACCATCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SEDILFLGRLIQ*LNVTFLLNHPQ Trigger: CTGAGGATGGTTGAGCAAAAAGGTGACATTGAGCCACTGGATTAACCTGCCCAGAAACAGGATATCTTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000656037.1 ENST00000665837.1 |
||
| CDS CAA 72 bp | ATGCCAAAGCCTCCTCGTTCTCCAACAGCTTCATGCTaGGCACCAGCAATATCCCCAAAGAACTTAGATATT | + |
|
Preference number: 6 (lower is better) Translates to: MPKPPRSPTASC*APAISPKNLDI Trigger: AATATCTAAGTTCTTTGGGGATATTGCTGGTGCCAAGCATGAAGCTGTTGGAGAACGAGGAGGCTTTGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS CAA 72 bp | ACGGCTACAAAATTTCTAAGGAGGCAGACATTATTCTaGGGTGATCAGAAGAGACTTCCTCGAAGTTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TATKFLRRQTLF*GDQKRLPRSWG Trigger: CCCCCAACTTCGAGGAAGTCTCTTCTGATCACCCAAGAATAATGTCTGCCTCCTTAGAAATTTTGTAGCCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS CAA 72 bp | CCTCTCATACACCATGGTGCGTGTCCTTTGAGAAATTaGTTTTCCCCTCACCACACCAAAGAATGTTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: PLIHHGACPLRN*FSPHHTKECFT Trigger: AGTGAAACATTCTTTGGTGTGGTGAGGGGAAAACAAATTTCTCAAAGGACACGCACCATGGTGTATGAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000445673.1 ENST00000446548.1 ENST00000656037.1 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS CAA 72 bp | CAAACAACAACACAGGCATCCCAGCTTGTGAATCAGTaGTCCTACTTTCACCTGCACTTTGAATTCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: QTTTQASQLVNQ*SYFHLHFEFSM Trigger: CATGCTGAATTCAAAGTGCAGGTGAAAGTAGGACAACTGATTCACAAGCTGGGATGCCTGTGTTGTTGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000446548.1 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS CAA 72 bp | GGCATCCTGAATGGGATTCCCTTGAGCTATGCAAGTTaGAAGAAAACTCCAAAGTATCTGTTCTGTCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GILNGIPLSYAS*KKTPKYLFCPQ Trigger: CTGAGGACAGAACAGATACTTTGGAGTTTTCTTCAAACTTGCATAGCTCAAGGGAATCCCATTCAGGATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661450.1 ENST00000671331.1 |
||
| CDS CAA 90 bp | CTCCAGTGTCCTCTCATACACCATGGTGCGTGTCCTTTGAGAAATTaGTTTTCCCCTCACCACACCAAAGAATGTTTCACTTGTTTATCA | + |
|
Preference number: 6 (lower is better) Translates to: LQCPLIHHGACPLRN*FSPHHTKECFTCLS Trigger: TGATAAACAAGTGAAACATTCTTTGGTGTGGTGAGGGGAAAACAAATTTCTCAAAGGACACGCACCATGGTGTATGAGAGGACACTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000445673.1 ENST00000446548.1 ENST00000656037.1 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS TCA 72 bp | ATTGTCTTTATCTTCATTATCTTCATCGCAGATCGTTaGTTCTCCAAGTTGGGTCCTCTAGCAGTCTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: IVFIFIIFIADR*FSKLGPLAVSL Trigger: GAGGGAGACTGCTAGAGGACCCAACTTGGAGAATCAACGATCTGCGATGAAGATAATGAAGATAAAGACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS GCA 72 bp | AAGCCAAGTGCTCATGAGTCTGGAGACCCATTTGTCTaGAGTCTGCTGCATTGCCTAGACTTTATTATTTAT | + |
|
Preference number: 6 (lower is better) Translates to: KPSAHESGDPFV*SLLHCLDFIIY Trigger: ATAAATAATAAAGTCTAGGCAATGCAGCAGACTGCAGACAAATGGGTCTCCAGACTCATGAGCACTTGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS CAA 72 bp | TTTGTTTTCCCCTCACCACACCAAAGAATGTTTCACTaGTTTATCAAGTCACAGCTGTGTTCCAGGTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: FVFPSPHQRMFH*FIKSQLCSRWC Trigger: ACACCACCTGGAACACAGCTGTGACTTGATAAACAAGTGAAACATTCTTTGGTGTGGTGAGGGGAAAACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000445673.1 ENST00000446548.1 ENST00000656037.1 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS CAA 72 bp | CATTGTCTTTATCTTCATTATCTTCATCGCAGATCGTaGATTCTCCAAGTTGGGTCCTCTAGCAGTCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: HCLYLHYLHRRS*ILQVGSSSSLP Trigger: AGGGAGACTGCTAGAGGACCCAACTTGGAGAATCAACGATCTGCGATGAAGATAATGAAGATAAAGACAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000439009.1 ENST00000442937.6 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS CAA 72 bp | ATGAACACACCCTGTTTAGAATTATCACCACATTCTTaGGTCATCCAGGGCCACTGCATCAAATTTCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: MNTPCLELSPHS*VIQGHCIKFQQ Trigger: CTGCTGAAATTTGATGCAGTGGCCCTGGATGACCAAAGAATGTGGTGATAATTCTAAACAGGGTGTGTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS CAA 90 bp | GCATTTACATTTGTACCACTGAATAGCTGTTCTCCATCATCCCATTaGGTCTTCAGACTCCATAATCCTTTAAAGCTCTGCACCTTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: AFTFVPLNSCSPSSH*VFRLHNPLKLCTFR Trigger: CCGAAAGGTGCAGAGCTTTAAAGGATTATGGAGTCTGAAGACCAAATGGGATGATGGAGAACAGCTATTCAGTGGTACAAATGTAAATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000442937.6 ENST00000657906.1 ENST00000661409.1 ENST00000661450.1 ENST00000665837.1 ENST00000671331.1 |
||
| CDS CAA 90 bp | TTTGAGAAATTTGTTTTCCCCTCACCACACCAAAGAATGTTTCACTaGTTTATCAAGTCACAGCTGTGTTCCAGGTGGTGTTTCTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FEKFVFPSPHQRMFH*FIKSQLCSRWCFWQ Trigger: CTGCCAGAAACACCACCTGGAACACAGCTGTGACTTGATAAACAAGTGAAACATTCTTTGGTGTGGTGAGGGGAAAACAAATTTCTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661450.1 |
||
| CDS CAA 90 bp | TTTGAGAAATTTGTTTTCCCCTCACCACACCAAAGAATGTTTCACTaGTTTATCAAGTCACAGCTGTGTTCCAGGTGGTGTTTCCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FEKFVFPSPHQRMFH*FIKSQLCSRWCFQS Trigger: GCTCTGGAAACACCACCTGGAACACAGCTGTGACTTGATAAACAAGTGAAACATTCTTTGGTGTGGTGAGGGGAAAACAAATTTCTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000660801.1 ENST00000668730.1 |
||
| CDS CAA 90 bp | CTTCACTTAATGAACACACCCTGTTTAGAATTATCACCACATTCTTaGGTCATCCAGGGCCACTGCATCAAATTTCAGCAGCTGAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: LHLMNTPCLELSPHS*VIQGHCIKFQQLNG Trigger: ACCATTCAGCTGCTGAAATTTGATGCAGTGGCCCTGGATGACCAAAGAATGTGGTGATAATTCTAAACAGGGTGTGTTCATTAAGTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS GCA 72 bp | GTAATGTGGCATCCTGAATGGGATTCCCTTGAGCTATaGAAGTTTGAAGAAAACTCCAAAGTATCTGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VMWHPEWDSLEL*KFEENSKVSVL Trigger: CAGAACAGATACTTTGGAGTTTTCTTCAAACTTGCATAGCTCAAGGGAATCCCATTCAGGATGCCACATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661450.1 ENST00000671331.1 |
||
| CDS CAA 90 bp | TTTGAGAAATTTGTTTTCCCCTCACCACACCAAAGAATGTTTCACTaGTTTATCAAGTCACAGCTGTGTTCCAGGTGGTGTTTCTTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: FEKFVFPSPHQRMFH*FIKSQLCSRWCFFR Trigger: CCGAAAGAAACACCACCTGGAACACAGCTGTGACTTGATAAACAAGTGAAACATTCTTTGGTGTGGTGAGGGGAAAACAAATTTCTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439009.1 |
||
| CDS CAA 90 bp | TTCAGACAGAAAGCAGTATTTCTTACCCTAATAATCTTCAATGGTTaGTCGACTGAACTGTCAAAGGGCTGCAGTTGTCAGTCATATCAC | + |
|
Preference number: 6 (lower is better) Translates to: FRQKAVFLTLIIFNG*STELSKGCSCQSYH Trigger: GTGATATGACTGACAACTGCAGCCCTTTGACAGTTCAGTCGACAAACCATTGAAGATTATTAGGGTAAGAAATACTGCTTTCTGTCTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656037.1 ENST00000665837.1 |
||
| CDS TCA 72 bp | TCACTTCTGCTCTGGAAGCTTCTTAAAGGGTCCTTATaGTTTTGGACGCTGACATTGACATTGTCTTTATCT | + |
|
Preference number: 6 (lower is better) Translates to: SLLLWKLLKGSL*FWTLTLTLSLS Trigger: AGATAAAGACAATGTCAATGTCAGCGTCCAAAATCATAAGGACCCTTTAAGAAGCTTCCAGAGCAGAAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000442937.6 ENST00000660801.1 ENST00000661409.1 ENST00000661450.1 ENST00000668730.1 ENST00000671331.1 |
||
| CDS TCA 72 bp | TACAAAATTTCTAAGGAGGCAGACATTATTCTTGGGTaGTCAGAAGAGACTTCCTCGAAGTTGGGGGATAAA | + |
|
Preference number: 6 (lower is better) Translates to: YKISKEADIILG*SEETSSKLGDK Trigger: TTTATCCCCCAACTTCGAGGAAGTCTCTTCTGATCACCCAAGAATAATGTCTGCCTCCTTAGAAATTTTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS GCA 72 bp | AGCTGTGTTCCAGGTGGTGTTTCATTAATAAAGAAATaGAGGTCCATCGTAACATTTTCTCACCCTCGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SCVPGGVSLIKK*RSIVTFSHPRN Trigger: ATTTCGAGGGTGAGAAAATGTTACGATGGACCTGCATTTCTTTATTAATGAAACACCACCTGGAACACAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446548.1 |
||
| CDS CAA 90 bp | GTATACCTCCATCTATGGCTTCTCATACCAGAGAAGTTGACACAATaGTTAGTCATCTGTGACCAATTTTTGGAAGCTGTGAAAATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VYLHLWLLIPEKLTQ*LVICDQFLEAVKME Trigger: TTCCATTTTCACAGCTTCCAAAAATTGGTCACAGATGACTAACAATTGTGTCAACTTCTCTGGTATGAGAAGCCATAGATGGAGGTATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS CAA 90 bp | ATCATTTCTGTATACCTCCATCTATGGCTTCTCATACCAGAGAAGTaGACACAATTGTTAGTCATCTGTGACCAATTTTTGGAAGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: IISVYLHLWLLIPEK*TQLLVICDQFLEAV Trigger: CACAGCTTCCAAAAATTGGTCACAGATGACTAACAATTGTGTCAACTTCTCTGGTATGAGAAGCCATAGATGGAGGTATACAGAAATGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS TCA 72 bp | ATTTCTTACCCTAATAATCTTCAATGGTTTGTCGACTaGACTGTCAAAGGGCTGCAGTTGTCAGTCATATCA | + |
|
Preference number: 6 (lower is better) Translates to: ISYPNNLQWFVD*TVKGLQLSVIS Trigger: TGATATGACTGACAACTGCAGCCCTTTGACAGTTCAGTCGACAAACCATTGAAGATTATTAGGGTAAGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656037.1 ENST00000665837.1 |
||
| CDS TCA 72 bp | CATACCAGAGAAGTTGACACAATTGTTAGTCATCTGTaGCCAATTTTTGGAAGCTGTGAAAATGGAACCAAG | + |
|
Preference number: 6 (lower is better) Translates to: HTREVDTIVSHL*PIFGSCENGTK Trigger: CTTGGTTCCATTTTCACAGCTTCCAAAAATTGGTCACAGATGACTAACAATTGTGTCAACTTCTCTGGTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS GCA 72 bp | AGAGAACTATCCAGTACAGATAGCCTTTCACAGGTCTaGCTTTATGGCTGTGAAAATAATTCAAAGAACACA | + |
|
Preference number: 6 (lower is better) Translates to: RELSSTDSLSQV*LYGCENNSKNT Trigger: TGTGTTCTTTGAATTATTTTCACAGCCATAAAGGCAGACCTGTGAAAGGCTATCTGTACTGGATAGTTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668730.1 |
||
| CDS CAA 90 bp | TTTGAGAAATTTGTTTTCCCCTCACCACACCAAAGAATGTTTCACTaGTTTATCAAGTCACAGCTGTGTTCCAGGTGGTGTTTCATTAAT | + |
|
Preference number: 6 (lower is better) Translates to: FEKFVFPSPHQRMFH*FIKSQLCSRWCFIN Trigger: ATTAATGAAACACCACCTGGAACACAGCTGTGACTTGATAAACAAGTGAAACATTCTTTGGTGTGGTGAGGGGAAAACAAATTTCTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446548.1 |
||