Pregenerated sensors for LINC00570 (Homo sapiens)
Ensembl gene IDs: ENSG00000224177Ensembl transcript IDs: ENST00000417473.6, ENST00000432665.2, ENST00000437795.5, ENST00000453100.1, ENST00000658552.1, ENST00000661605.1, ENST00000666797.1, ENST00000668851.1, ENST00000670478.1, ENST00000675665.1
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGAGGTGGGCTCCCAAAGCCTTGGGCAGCTCTGCCTCTGGGGCTCTaGAGGGCTCAACCCCTGCGGCTGCTTATAGGCTGGCGTGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: RGGLPKPWAALPLGL*RAQPLRLLIGWRGA Trigger: GGCACCACGCCAGCCTATAAGCAGCCGCAGGGGTTGAGCCCTGCAGAGCCCCAGAGGCAGAGCTGCCCAAGGCTTTGGGAGCCCACCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000432665.2 ENST00000658552.1 |
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| CDS CCA 90 bp | TCACATCCAGGGCACAGTGATGCAAGAGGTGGGCTCCCAAAGCCTTaGGCAGCTCTGCCTCTGGGGCTCTGCAGGGCTCAACCCCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: SHPGHSDARGGLPKP*AALPLGLCRAQPLR Trigger: CCGCAGGGGTTGAGCCCTGCAGAGCCCCAGAGGCAGAGCTGCCCAAGGCTTTGGGAGCCCACCTCTTGCATCACTGTGCCCTGGATGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000432665.2 ENST00000658552.1 |
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| CDS GCA 90 bp | GCTCTGCAGGGCTCAACCCCTGCGGCTGCTTATAGGCTGGCGTGGTaGCCTGAAGCAGGAGAGGCACATGGTAAGTGCTTAATCGCCGGG | + |
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Preference number: 5 (lower is better) Translates to: ALQGSTPAAAYRLAW*PEAGEAHGKCLIAG Trigger: CCCGGCGATTAAGCACTTACCATGTGCCTCTCCTGCTTCAGGGCACCACGCCAGCCTATAAGCAGCCGCAGGGGTTGAGCCCTGCAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432665.2 |
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| CDS CCA 90 bp | GGGGCTCTGCAGGGCTCAACCCCTGCGGCTGCTTATAGGCTGGCGTaGTGCCCTGAAGCAGGAGAGGCACATGGTAAGTGCTTAATCGCC | + |
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Preference number: 5 (lower is better) Translates to: GALQGSTPAAAYRLA*CPEAGEAHGKCLIA Trigger: GGCGATTAAGCACTTACCATGTGCCTCTCCTGCTTCAGGGCACCACGCCAGCCTATAAGCAGCCGCAGGGGTTGAGCCCTGCAGAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432665.2 |
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| CDS CCA 90 bp | AGTCGCCATCTTGGTTGTCTGCCTTCTCTGGTGGCATCCCTTTCCTaGGGTAGTAAGCCTCAGCTGCCACCATGGGGGTACAGGCATTGG | + |
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Preference number: 5 (lower is better) Translates to: SRHLGCLPSLVASLS*GSKPQLPPWGYRHW Trigger: CCAATGCCTGTACCCCCATGGTGGCAGCTGAGGCTTACTACCCCAGGAAAGGGATGCCACCAGAGAAGGCAGACAACCAAGATGGCGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000453100.1 ENST00000658552.1 |
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| CDS CCA 90 bp | CAGGAATGCCTCTGCATTCCTCAGCAGAGTGGGAATTTCCAGTCCTaGTTCCTGGAGGCGCGTTCTCACCTCTCCCTGCTGTACTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: QECLCIPQQSGNFQS*FLEARSHLSLLYCL Trigger: GAGGCAGTACAGCAGGGAGAGGTGAGAACGCGCCTCCAGGAACCAGGACTGGAAATTCCCACTCTGCTGAGGAATGCAGAGGCATTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661605.1 |
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| CDS TCA 90 bp | CTAGATTCTGGAATCTTCAGGCTTCTTGGCGCTCAGCCTGTTCGTTaGTCCCCCTGCTGCTTCTACCACCCAGATCCCAGCAGGGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: LDSGIFRLLGAQPVR*SPCCFYHPDPSRES Trigger: GCTTTCCCTGCTGGGATCTGGGTGGTAGAAGCAGCAGGGGGATCAACGAACAGGCTGAGCGCCAAGAAGCCTGAAGATTCCAGAATCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000417473.6 ENST00000670478.1 |
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| CDS TCA 90 bp | TCTCCAGCACTCCTAACTGACTCCATTTCTTCTACCCAGAGGACCTaGCCTGACACCATCGATGCTGGAAGTGGCCATGGGGGTACAGGC | + |
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Preference number: 5 (lower is better) Translates to: SPALLTDSISSTQRT*PDTIDAGSGHGGTG Trigger: GCCTGTACCCCCATGGCCACTTCCAGCATCGATGGTGTCAGGTCAGGTCCTCTGGGTAGAAGAAATGGAGTCAGTTAGGAGTGCTGGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432665.2 |
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| CDS CCA 90 bp | TACTTCTGTGCAGCTCCAGGAATGCCTCTGCATTCCTCAGCAGAGTaGGAATTTCCAGTCCTGGTTCCTGGAGGCGCGTTCTCACCTCTC | + |
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Preference number: 5 (lower is better) Translates to: YFCAAPGMPLHSSAE*EFPVLVPGGAFSPL Trigger: GAGAGGTGAGAACGCGCCTCCAGGAACCAGGACTGGAAATTCCCACTCTGCTGAGGAATGCAGAGGCATTCCTGGAGCTGCACAGAAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661605.1 ENST00000668851.1 |
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| CDS CCA 90 bp | AGTCGCCATCTTGGTTGTCTGCCTTCTCTGGTGGCATCCCTTTCCTaGGGTAGTAAGCCTCAGCTGCCACCTATGTTTCCCCAGGGACAT | + |
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Preference number: 5 (lower is better) Translates to: SRHLGCLPSLVASLS*GSKPQLPPMFPQGH Trigger: ATGTCCCTGGGGAAACATAGGTGGCAGCTGAGGCTTACTACCCCAGGAAAGGGATGCCACCAGAGAAGGCAGACAACCAAGATGGCGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668851.1 |
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| CDS TCA 90 bp | TCTCCAGCACTCCTAACTGACTCCATTTCTTCTACCCAGAGGACCTaGCCTGACACCATCGATGCTGGAAGTGGCCTCTCCCTGCTGTAC | + |
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Preference number: 5 (lower is better) Translates to: SPALLTDSISSTQRT*PDTIDAGSGLSLLY Trigger: GTACAGCAGGGAGAGGCCACTTCCAGCATCGATGGTGTCAGGTCAGGTCCTCTGGGTAGAAGAAATGGAGTCAGTTAGGAGTGCTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666797.1 |
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| CDS GCA 90 bp | TCCCGGCTTCGACAATGTACTTCTGTGCAGCTCCAGGAATGCCTCTaGATTCCTCAGCAGAGTGGGAATTTCCAGTCCTGGTTCCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SRLRQCTSVQLQECL*IPQQSGNFQSWFLE Trigger: CTCCAGGAACCAGGACTGGAAATTCCCACTCTGCTGAGGAATGCAGAGGCATTCCTGGAGCTGCACAGAAGTACATTGTCGAAGCCGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661605.1 ENST00000668851.1 |
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| CDS GCA 90 bp | GGGACATCCCGGCTTCGACAATGTACTTCTGTGCAGCTCCAGGAATaGCTCTGCATTCCTCAGCAGAGTGGGAATTTCCAGTCCTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: GTSRLRQCTSVQLQE*LCIPQQSGNFQSWF Trigger: GAACCAGGACTGGAAATTCCCACTCTGCTGAGGAATGCAGAGGCATTCCTGGAGCTGCACAGAAGTACATTGTCGAAGCCGGGATGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661605.1 ENST00000668851.1 |
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| CDS CCA 90 bp | GCTCAAAAATTGAGAGTCGCCATCTTGGTTGTCTGCCTTCTCTGGTaGCATCCCTTTCCTGGGGTAGTAAGCCTCAGCTGCCACCATGGG | + |
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Preference number: 5 (lower is better) Translates to: AQKLRVAILVVCLLW*HPFPGVVSLSCHHG Trigger: CCCATGGTGGCAGCTGAGGCTTACTACCCCAGGAAAGGGATGCCACCAGAGAAGGCAGACAACCAAGATGGCGACTCTCAATTTTTGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000453100.1 ENST00000658552.1 |
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| CDS TCA 90 bp | TCCAAAATAATCTCCTTGATTCCACGTCTCACATCCAGGGCACAGTaGTGCAAGAGGTGGGCTCCCAAAGCCTTGGGCAGCTCTGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: SKIISLIPRLTSRAQ*CKRWAPKALGSSAS Trigger: AGAGGCAGAGCTGCCCAAGGCTTTGGGAGCCCACCTCTTGCATCACTGTGCCCTGGATGTGAGACGTGGAATCAAGGAGATTATTTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000432665.2 ENST00000437795.5 ENST00000658552.1 |
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| CDS TCA 90 bp | TCTCCAGCACTCCTAACTGACTCCATTTCTTCTACCCAGAGGACCTaGCCTGACACCATCGATGCTGGAAGTGGCCTATGTTTCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SPALLTDSISSTQRT*PDTIDAGSGLCFPR Trigger: CCTGGGGAAACATAGGCCACTTCCAGCATCGATGGTGTCAGGTCAGGTCCTCTGGGTAGAAGAAATGGAGTCAGTTAGGAGTGCTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661605.1 |
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| CDS TCA 90 bp | TCTCCAGCACTCCTAACTGACTCCATTTCTTCTACCCAGAGGACCTaGCCTGACACCATCGATGCTGGAAGTGGCCTTAGAGGACTGTGC | + |
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Preference number: 5 (lower is better) Translates to: SPALLTDSISSTQRT*PDTIDAGSGLRGLC Trigger: GCACAGTCCTCTAAGGCCACTTCCAGCATCGATGGTGTCAGGTCAGGTCCTCTGGGTAGAAGAAATGGAGTCAGTTAGGAGTGCTGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675665.1 |
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| CDS GCA 90 bp | CCTATGTTTCCCCAGGGACATCCCGGCTTCGACAATGTACTTCTGTaGAGCTCCAGGAATGCCTCTGCATTCCTCAGCAGAGTGGGAATT | + |
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Preference number: 5 (lower is better) Translates to: PMFPQGHPGFDNVLL*SSRNASAFLSRVGI Trigger: AATTCCCACTCTGCTGAGGAATGCAGAGGCATTCCTGGAGCTGCACAGAAGTACATTGTCGAAGCCGGGATGTCCCTGGGGAAACATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661605.1 ENST00000668851.1 |
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| CDS CCA 90 bp | ACTCTGAATGCTTTTCCCGCTAGATTCTGGAATCTTCAGGCTTCTTaGCGCTCAGCCTGTTCGTTGATCCCCCTGCTGCTTCTACCACCC | + |
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Preference number: 5 (lower is better) Translates to: TLNAFPARFWNLQAS*RSACSLIPLLLLPP Trigger: GGGTGGTAGAAGCAGCAGGGGGATCAACGAACAGGCTGAGCGCCAAGAAGCCTGAAGATTCCAGAATCTAGCGGGAAAAGCATTCAGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000417473.6 ENST00000670478.1 |
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| CDS CCA 90 bp | GCCAGCACGCAGCCTTCTCTATTCATTCTCTCTTGTGTGGACCCGTaGGGGAATTCTATGAGTCTTGCCACTTCAGGGCTCCACTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: ASTQPSLFILSCVDP*GNSMSLATSGLHSE Trigger: TTCTGAGTGGAGCCCTGAAGTGGCAAGACTCATAGAATTCCCCCACGGGTCCACACAAGAGAGAATGAATAGAGAAGGCTGCGTGCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS CCA 90 bp | AGTCGCCATCTTGGTTGTCTGCCTTCTCTGGTGGCATCCCTTTCCTaGGGTAGTAAGCCTCAGCTGCCACTCATTCTGACTCTGAATGCT | + |
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Preference number: 5 (lower is better) Translates to: SRHLGCLPSLVASLS*GSKPQLPLILTLNA Trigger: AGCATTCAGAGTCAGAATGAGTGGCAGCTGAGGCTTACTACCCCAGGAAAGGGATGCCACCAGAGAAGGCAGACAACCAAGATGGCGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670478.1 |
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| CDS CCA 90 bp | GCTCAAAAATTGAGAGTCGCCATCTTGGTTGTCTGCCTTCTCTGGTaGCATCCCTTTCCTGGGGTAGTAAGCCTCAGCTGCCACCTCTTA | + |
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Preference number: 5 (lower is better) Translates to: AQKLRVAILVVCLLW*HPFPGVVSLSCHLL Trigger: TAAGAGGTGGCAGCTGAGGCTTACTACCCCAGGAAAGGGATGCCACCAGAGAAGGCAGACAACCAAGATGGCGACTCTCAATTTTTGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000437795.5 ENST00000661605.1 ENST00000666797.1 ENST00000675665.1 |
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| CDS CCA 90 bp | GCTCAAAAATTGAGAGTCGCCATCTTGGTTGTCTGCCTTCTCTGGTaGCATCCCTTTCCTGGGGTAGTAAGCCTCAGCTGCCACCTATGT | + |
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Preference number: 5 (lower is better) Translates to: AQKLRVAILVVCLLW*HPFPGVVSLSCHLC Trigger: ACATAGGTGGCAGCTGAGGCTTACTACCCCAGGAAAGGGATGCCACCAGAGAAGGCAGACAACCAAGATGGCGACTCTCAATTTTTGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668851.1 |
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| CDS CCA 90 bp | CAGCTGCCACTCATTCTGACTCTGAATGCTTTTCCCGCTAGATTCTaGAATCTTCAGGCTTCTTGGCGCTCAGCCTGTTCGTTGATCCCC | + |
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Preference number: 5 (lower is better) Translates to: QLPLILTLNAFPARF*NLQASWRSACSLIP Trigger: GGGGATCAACGAACAGGCTGAGCGCCAAGAAGCCTGAAGATTCCAGAATCTAGCGGGAAAAGCATTCAGAGTCAGAATGAGTGGCAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670478.1 |
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| CDS CCA 90 bp | GCTCAAAAATTGAGAGTCGCCATCTTGGTTGTCTGCCTTCTCTGGTaGCATCCCTTTCCTGGGGTAGTAAGCCTCAGCTGCCACTCATTC | + |
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Preference number: 5 (lower is better) Translates to: AQKLRVAILVVCLLW*HPFPGVVSLSCHSF Trigger: GAATGAGTGGCAGCTGAGGCTTACTACCCCAGGAAAGGGATGCCACCAGAGAAGGCAGACAACCAAGATGGCGACTCTCAATTTTTGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670478.1 |
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| CDS CCA 90 bp | TGGAAGTGGCTCATTCTGACTCTGAATGCTTTTCCCGCTAGATTCTaGAATCTTCAGGCTTCTTGGCGCTCAGCCTGTTCGTTGATCCCC | + |
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Preference number: 5 (lower is better) Translates to: WKWLILTLNAFPARF*NLQASWRSACSLIP Trigger: GGGGATCAACGAACAGGCTGAGCGCCAAGAAGCCTGAAGATTCCAGAATCTAGCGGGAAAAGCATTCAGAGTCAGAATGAGCCACTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417473.6 |
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| CDS CCA 90 bp | GGTGGCAGAAATTTTATGTCAGCTCATGGTTTCTTCAGCCAGTTCTaGATCCCAGCACAGCCCAACTCCTTGAAAACGTCTTCCAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: GGRNFMSAHGFFSQF*IPAQPNSLKTSSRS Trigger: GCTCCTGGAAGACGTTTTCAAGGAGTTGGGCTGTGCTGGGATCCAGAACTGGCTGAAGAAACCATGAGCTGACATAAAATTTCTGCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS CCA 90 bp | TGGAGCCTCCATTCTGCTAGGTGGCAGAAATTTTATGTCAGCTCATaGTTTCTTCAGCCAGTTCTGGATCCCAGCACAGCCCAACTCCTT | + |
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Preference number: 5 (lower is better) Translates to: WSLHSARWQKFYVSS*FLQPVLDPSTAQLL Trigger: AAGGAGTTGGGCTGTGCTGGGATCCAGAACTGGCTGAAGAAACCATGAGCTGACATAAAATTTCTGCCACCTAGCAGAATGGAGGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS CCA 90 bp | CTAGGTCCTATTCTCTTTCAACCCTCTAGGGAACTCAGGAAACATTaGGCTATTGTCCATAATGTGGTGATGGTGGTGGTGATGGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: LGPILFQPSRELRKH*AIVHNVVMVVVMVV Trigger: CACCACCATCACCACCACCATCACCACATTATGGACAATAGCCCAATGTTTCCTGAGTTCCCTAGAGGGTTGAAAGAGAATAGGACCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS GCA 72 bp | GGCAGCGGCGGTGGTGGTGGTGGTGTCACCCGAGGCTaGCTTGGTCCAGCCAGCACGCAGCCTTCTCTATTC | + |
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Preference number: 6 (lower is better) Translates to: GSGGGGGGVTRG*LGPASTQPSLF Trigger: GAATAGAGAAGGCTGCGTGCTGGCTGGACCAAGGCAGCCTCGGGTGACACCACCACCACCACCGCCGCTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS GCA 72 bp | CTCCCAAAGCCTTGGGCAGCTCTGCCTCTGGGGCTCTaGAGGGCTCAACCCCTGCGGCTGCTTATAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LPKPWAALPLGL*RAQPLRLLIGW Trigger: CCAGCCTATAAGCAGCCGCAGGGGTTGAGCCCTGCAGAGCCCCAGAGGCAGAGCTGCCCAAGGCTTTGGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000432665.2 ENST00000658552.1 |
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| CDS CAA 72 bp | GCGGCGGTGGTGGTGGTGGTGTCACCCGAGGCTGCCTaGGTCCAGCCAGCACGCAGCCTTCTCTATTCATTC | + |
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Preference number: 6 (lower is better) Translates to: AAVVVVVSPEAA*VQPARSLLYSF Trigger: GAATGAATAGAGAAGGCTGCGTGCTGGCTGGACCAAGGCAGCCTCGGGTGACACCACCACCACCACCGCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS CCA 72 bp | CGGCGGTGGTGGTGGTGGTGTCACCCGAGGCTGCCTTaGTCCAGCCAGCACGCAGCCTTCTCTATTCATTCT | + |
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Preference number: 6 (lower is better) Translates to: RRWWWWCHPRLP*SSQHAAFSIHS Trigger: AGAATGAATAGAGAAGGCTGCGTGCTGGCTGGACCAAGGCAGCCTCGGGTGACACCACCACCACCACCGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS CCA 72 bp | CAGGGCTCAACCCCTGCGGCTGCTTATAGGCTGGCGTaGTGCCCTGAAGCAGGAGAGGCACATGGTAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: QGSTPAAAYRLA*CPEAGEAHGKC Trigger: GCACTTACCATGTGCCTCTCCTGCTTCAGGGCACCACGCCAGCCTATAAGCAGCCGCAGGGGTTGAGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432665.2 |
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| CDS GCA 72 bp | GGCTCAACCCCTGCGGCTGCTTATAGGCTGGCGTGGTaGCCTGAAGCAGGAGAGGCACATGGTAAGTGCTTA | + |
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Preference number: 6 (lower is better) Translates to: GSTPAAAYRLAW*PEAGEAHGKCL Trigger: TAAGCACTTACCATGTGCCTCTCCTGCTTCAGGGCACCACGCCAGCCTATAAGCAGCCGCAGGGGTTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432665.2 |
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| CDS TCA 72 bp | GGAATCTTCAGGCTTCTTGGCGCTCAGCCTGTTCGTTaGTCCCCCTGCTGCTTCTACCACCCAGATCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GIFRLLGAQPVR*SPCCFYHPDPS Trigger: GCTGGGATCTGGGTGGTAGAAGCAGCAGGGGGATCAACGAACAGGCTGAGCGCCAAGAAGCCTGAAGATTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000417473.6 ENST00000670478.1 |
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| CDS GCA 72 bp | GCGTGGTGCCCTGAAGCAGGAGAGGCACATGGTAAGTaGTTAATCGCCGGGAGCCAGAAGGTCACACCCATT | + |
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Preference number: 6 (lower is better) Translates to: AWCPEAGEAHGK*LIAGSQKVTPI Trigger: AATGGGTGTGACCTTCTGGCTCCCGGCGATTAAGCACTTACCATGTGCCTCTCCTGCTTCAGGGCACCACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432665.2 |
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| CDS GCA 72 bp | GACCTGACACCATCGATGCTGGAAGTGGCCTCTCCCTaGTGTACTGCCTCCCACTCAGGAACTTCTTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: DLTPSMLEVASP*CTASHSGTSFP Trigger: CGGGAAAGAAGTTCCTGAGTGGGAGGCAGTACAGCAGGGAGAGGCCACTTCCAGCATCGATGGTGTCAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666797.1 |
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| CDS CCA 72 bp | TTCCTCAGCAGAGTGGGAATTTCCAGTCCTGGTTCCTaGAGGCGCGTTCTCACCTCTCCCTGCTGTACTGCC | + |
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Preference number: 6 (lower is better) Translates to: FLSRVGISSPGS*RRVLTSPCCTA Trigger: GGCAGTACAGCAGGGAGAGGTGAGAACGCGCCTCCAGGAACCAGGACTGGAAATTCCCACTCTGCTGAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661605.1 ENST00000668851.1 |
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| CDS CCA 72 bp | CTCTGCATTCCTCAGCAGAGTGGGAATTTCCAGTCCTaGTTCCTGGAGGCGCGTTCTCACCTCTCCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LCIPQQSGNFQS*FLEARSHLSLL Trigger: CAGCAGGGAGAGGTGAGAACGCGCCTCCAGGAACCAGGACTGGAAATTCCCACTCTGCTGAGGAATGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661605.1 ENST00000668851.1 |
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| CDS CAA 72 bp | TGGAATCTTCAGGCTTCTTGGCGCTCAGCCTGTTCGTaGATCCCCCTGCTGCTTCTACCACCCAGATCCCAG | + |
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Preference number: 6 (lower is better) Translates to: WNLQASWRSACS*IPLLLLPPRSQ Trigger: CTGGGATCTGGGTGGTAGAAGCAGCAGGGGGATCAACGAACAGGCTGAGCGCCAAGAAGCCTGAAGATTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000417473.6 ENST00000670478.1 |
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| CDS CAA 90 bp | GCTAGATTCTGGAATCTTCAGGCTTCTTGGCGCTCAGCCTGTTCGTaGATCCCCCTGCTGCTTCTACCACCCAGATCCCAGCAGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: ARFWNLQASWRSACS*IPLLLLPPRSQQGK Trigger: CTTTCCCTGCTGGGATCTGGGTGGTAGAAGCAGCAGGGGGATCAACGAACAGGCTGAGCGCCAAGAAGCCTGAAGATTCCAGAATCTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000417473.6 ENST00000670478.1 |
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| CDS TCA 72 bp | CCGGCCGAAAGAAAGGCTGCAGGCTCCACTCAAGTCTaGAACCCAGCAGGGTGCCATTACGTCTTAAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: PAERKAAGSTQV*NPAGCHYVLKL Trigger: GAGCTTTAAGACGTAATGGCACCCTGCTGGGTTTCAGACTTGAGTGGAGCCTGCAGCCTTTCTTTCGGCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000432665.2 ENST00000437795.5 ENST00000453100.1 ENST00000658552.1 |
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| CDS CCA 72 bp | TTGAGAGTCGCCATCTTGGTTGTCTGCCTTCTCTGGTaGCATCCCTTTCCTGGGGTAGTAAGCCTCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LRVAILVVCLLW*HPFPGVVSLSC Trigger: GCAGCTGAGGCTTACTACCCCAGGAAAGGGATGCCACCAGAGAAGGCAGACAACCAAGATGGCGACTCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000437795.5 ENST00000453100.1 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS CCA 72 bp | AATCTTGTGGTGGAGGAAGGGGACACGGGCACGTCATaGGGGTACAGGCATTGGGTAAATACTCCCGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: NLVVEEGDTGTS*GYRHWVNTPVP Trigger: TGGAACGGGAGTATTTACCCAATGCCTGTACCCCCATGACGTGCCCGTGTCCCCTTCCTCCACCACAAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437795.5 |
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| CDS CCA 72 bp | TCCCTTTCCTGGGGTAGTAAGCCTCAGCTGCCACCATaGGGGTACAGGCATTGGGTAAATACTCCCGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SLSWGSKPQLPP*GYRHWVNTPVP Trigger: TGGAACGGGAGTATTTACCCAATGCCTGTACCCCCATGGTGGCAGCTGAGGCTTACTACCCCAGGAAAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000453100.1 ENST00000658552.1 |
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| CDS CAA 90 bp | CTGCCTTGGTCCAGCCAGCACGCAGCCTTCTCTATTCATTCTCTCTaGTGTGGACCCGTGGGGGAATTCTATGAGTCTTGCCACTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LPWSSQHAAFSIHSL*CGPVGEFYESCHFR Trigger: CCTGAAGTGGCAAGACTCATAGAATTCCCCCACGGGTCCACACAAGAGAGAATGAATAGAGAAGGCTGCGTGCTGGCTGGACCAAGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS CAA 90 bp | GACCTGACACCATCGATGCTGGAAGTGGCCATGGGGGTACAGGCATaGGGTAAATACTCCCGTTCCAAAAGGGAGAAACCGGCCGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: DLTPSMLEVAMGVQA*GKYSRSKREKPAER Trigger: TCTTTCGGCCGGTTTCTCCCTTTTGGAACGGGAGTATTTACCCAATGCCTGTACCCCCATGGCCACTTCCAGCATCGATGGTGTCAGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000432665.2 |
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| CDS TCA 72 bp | CTCCTAACTGACTCCATTTCTTCTACCCAGAGGACCTaGCCTGACACCATCGATGCTGGAAGTGGCCATGGG | + |
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Preference number: 6 (lower is better) Translates to: LLTDSISSTQRT*PDTIDAGSGHG Trigger: CCCATGGCCACTTCCAGCATCGATGGTGTCAGGTCAGGTCCTCTGGGTAGAAGAAATGGAGTCAGTTAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432665.2 |
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| CDS TCA 72 bp | GACACCATCGATGCTGGAAGTGGCGGTTCTGCAGGCTaGACAGGAAGCATAGCAGCTTCTTCTCAGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: DTIDAGSGGSAG*TGSIAASSQLL Trigger: CAGAAGCTGAGAAGAAGCTGCTATGCTTCCTGTTCAGCCTGCAGAACCGCCACTTCCAGCATCGATGGTGTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437795.5 |
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| CDS TCA 72 bp | CTCCTAACTGACTCCATTTCTTCTACCCAGAGGACCTaGCCTGACACCATCGATGCTGGAAGTGGCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LLTDSISSTQRT*PDTIDAGSGLS Trigger: GGAGAGGCCACTTCCAGCATCGATGGTGTCAGGTCAGGTCCTCTGGGTAGAAGAAATGGAGTCAGTTAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666797.1 |
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| CDS CCA 72 bp | GCTTTTCCCGCTAGATTCTGGAATCTTCAGGCTTCTTaGCGCTCAGCCTGTTCGTTGATCCCCCTGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: AFPARFWNLQAS*RSACSLIPLLL Trigger: AAGCAGCAGGGGGATCAACGAACAGGCTGAGCGCCAAGAAGCCTGAAGATTCCAGAATCTAGCGGGAAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000417473.6 ENST00000670478.1 |
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| CDS CCA 72 bp | CATCGATGCTGGAAGTGGCCATGGGGGTACAGGCATTaGGTAAATACTCCCGTTCCAAAAGGGAGAAACCGG | + |
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Preference number: 6 (lower is better) Translates to: HRCWKWPWGYRH*VNTPVPKGRNR Trigger: CCGGTTTCTCCCTTTTGGAACGGGAGTATTTACCCAATGCCTGTACCCCCATGGCCACTTCCAGCATCGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000432665.2 |
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| CDS CCA 72 bp | AGTAAGCCTCAGCTGCCACCATGGGGGTACAGGCATTaGGTAAATACTCCCGTTCCAAAAGGGAGAAACCGG | + |
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Preference number: 6 (lower is better) Translates to: SKPQLPPWGYRH*VNTPVPKGRNR Trigger: CCGGTTTCTCCCTTTTGGAACGGGAGTATTTACCCAATGCCTGTACCCCCATGGTGGCAGCTGAGGCTTACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000453100.1 ENST00000658552.1 |
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| CDS CAA 72 bp | CCATCGATGCTGGAAGTGGCCATGGGGGTACAGGCATaGGGTAAATACTCCCGTTCCAAAAGGGAGAAACCG | + |
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Preference number: 6 (lower is better) Translates to: PSMLEVAMGVQA*GKYSRSKREKP Trigger: CGGTTTCTCCCTTTTGGAACGGGAGTATTTACCCAATGCCTGTACCCCCATGGCCACTTCCAGCATCGATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000432665.2 |
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| CDS TCA 72 bp | TCAGCCAGTTCTGGATCCCAGCACAGCCCAACTCCTTaGAAACGTCTTCCAGGAGCTTTGTGTGTGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: SASSGSQHSPTP*KRLPGALCVSM Trigger: CATGGACACACACAAAGCTCCTGGAAGACGTTTTCAAGGAGTTGGGCTGTGCTGGGATCCAGAACTGGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS TCA 72 bp | CTCCTAACTGACTCCATTTCTTCTACCCAGAGGACCTaGCCTGACACCATCGATGCTGGAAGTGGCGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLTDSISSTQRT*PDTIDAGSGGS Trigger: AGAACCGCCACTTCCAGCATCGATGGTGTCAGGTCAGGTCCTCTGGGTAGAAGAAATGGAGTCAGTTAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437795.5 |
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| CDS GCA 72 bp | CGACAATGTACTTCTGTGCAGCTCCAGGAATGCCTCTaGATTCCTCAGCAGAGTGGGAATTTCCAGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RQCTSVQLQECL*IPQQSGNFQSW Trigger: CCAGGACTGGAAATTCCCACTCTGCTGAGGAATGCAGAGGCATTCCTGGAGCTGCACAGAAGTACATTGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661605.1 ENST00000668851.1 |
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| CDS CAA 72 bp | TCCAGCCAGCACGCAGCCTTCTCTATTCATTCTCTCTaGTGTGGACCCGTGGGGGAATTCTATGAGTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SSQHAAFSIHSL*CGPVGEFYESC Trigger: GCAAGACTCATAGAATTCCCCCACGGGTCCACACAAGAGAGAATGAATAGAGAAGGCTGCGTGCTGGCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS CAA 90 bp | CATGGTTTCTTCAGCCAGTTCTGGATCCCAGCACAGCCCAACTCCTaGAAAACGTCTTCCAGGAGCTTTGTGTGTGTCCATGTGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: HGFFSQFWIPAQPNS*KTSSRSFVCVHVAS Trigger: GGAAGCCACATGGACACACACAAAGCTCCTGGAAGACGTTTTCAAGGAGTTGGGCTGTGCTGGGATCCAGAACTGGCTGAAGAAACCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS TCA 72 bp | CTCCTAACTGACTCCATTTCTTCTACCCAGAGGACCTaGCCTGACACCATCGATGCTGGAAGTGGCTCATTC | + |
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Preference number: 6 (lower is better) Translates to: LLTDSISSTQRT*PDTIDAGSGSF Trigger: GAATGAGCCACTTCCAGCATCGATGGTGTCAGGTCAGGTCCTCTGGGTAGAAGAAATGGAGTCAGTTAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417473.6 |
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| CDS TCA 72 bp | GTCTTGCCACTTCAGGGCTCCACTCAGAAGGCAAGGTaGAGTCTTCTTTGGAGCCAGATTCCCAAATGGATC | + |
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Preference number: 6 (lower is better) Translates to: VLPLQGSTQKAR*SLLWSQIPKWI Trigger: GATCCATTTGGGAATCTGGCTCCAAAGAAGACTTCACCTTGCCTTCTGAGTGGAGCCCTGAAGTGGCAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS TCA 72 bp | CTCCTAACTGACTCCATTTCTTCTACCCAGAGGACCTaGCCTGACACCATCGATGCTGGAAGTGGCCTATGT | + |
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Preference number: 6 (lower is better) Translates to: LLTDSISSTQRT*PDTIDAGSGLC Trigger: ACATAGGCCACTTCCAGCATCGATGGTGTCAGGTCAGGTCCTCTGGGTAGAAGAAATGGAGTCAGTTAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661605.1 |
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| CDS TCA 72 bp | CTCCTAACTGACTCCATTTCTTCTACCCAGAGGACCTaGCCTGACACCATCGATGCTGGAAGTGGCCTTAGA | + |
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Preference number: 6 (lower is better) Translates to: LLTDSISSTQRT*PDTIDAGSGLR Trigger: TCTAAGGCCACTTCCAGCATCGATGGTGTCAGGTCAGGTCCTCTGGGTAGAAGAAATGGAGTCAGTTAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675665.1 |
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| CDS CCA 72 bp | CAGCCTTCTCTATTCATTCTCTCTTGTGTGGACCCGTaGGGGAATTCTATGAGTCTTGCCACTTCAGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: QPSLFILSCVDP*GNSMSLATSGL Trigger: GAGCCCTGAAGTGGCAAGACTCATAGAATTCCCCCACGGGTCCACACAAGAGAGAATGAATAGAGAAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS CCA 72 bp | CTTCCCAAGTACCCAGTCACCAGCTGCTTCTATCCATaGGTGCACACTGACATCTCTCAAGGCATCCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LPKYPVTSCFYP*VHTDISQGILL Trigger: AAGAAGGATGCCTTGAGAGATGTCAGTGTGCACCCATGGATAGAAGCAGCTGGTGACTGGGTACTTGGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS CAA 72 bp | TCAGGGCTCCACTCAGAAGGCAAGGTGAAGTCTTCTTaGGAGCCAGATTCCCAAATGGATCTGGAGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SGLHSEGKVKSS*EPDSQMDLESP Trigger: TGGAGACTCCAGATCCATTTGGGAATCTGGCTCCAAAGAAGACTTCACCTTGCCTTCTGAGTGGAGCCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS CAA 72 bp | TTCAGCCAGTTCTGGATCCCAGCACAGCCCAACTCCTaGAAAACGTCTTCCAGGAGCTTTGTGTGTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: FSQFWIPAQPNS*KTSSRSFVCVH Trigger: ATGGACACACACAAAGCTCCTGGAAGACGTTTTCAAGGAGTTGGGCTGTGCTGGGATCCAGAACTGGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS TCA 72 bp | AGGGGTTTGACCCAGAATCCTCCTCTCAGGGTCATGTaGCAATATCTACCCAACCCTCTTGCTTCTTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: RGLTQNPPLRVM*QYLPNPLASSL Trigger: GAGAGAAGAAGCAAGAGGGTTGGGTAGATATTGTCACATGACCCTGAGAGGAGGATTCTGGGTCAAACCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS CCA 72 bp | CTCATTCTGACTCTGAATGCTTTTCCCGCTAGATTCTaGAATCTTCAGGCTTCTTGGCGCTCAGCCTGTTCG | + |
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Preference number: 6 (lower is better) Translates to: LILTLNAFPARF*NLQASWRSACS Trigger: CGAACAGGCTGAGCGCCAAGAAGCCTGAAGATTCCAGAATCTAGCGGGAAAAGCATTCAGAGTCAGAATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417473.6 ENST00000670478.1 |
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| CDS TCA 72 bp | TCCCTCTTGACTCTTTTCCCACCCGCCTCCTGCCATTaGCTCCAGCCTATAGAATCTTTAAACAATCACTGG | + |
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Preference number: 6 (lower is better) Translates to: SLLTLFPPASCH*LQPIESLNNHW Trigger: CCAGTGATTGTTTAAAGATTCTATAGGCTGGAGTCAATGGCAGGAGGCGGGTGGGAAAAGAGTCAAGAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS CAA 72 bp | CTCCCTCTTGACTCTTTTCCCACCCGCCTCCTGCCATaGACTCCAGCCTATAGAATCTTTAAACAATCACTG | + |
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Preference number: 6 (lower is better) Translates to: LPLDSFPTRLLP*TPAYRIFKQSL Trigger: CAGTGATTGTTTAAAGATTCTATAGGCTGGAGTCAATGGCAGGAGGCGGGTGGGAAAAGAGTCAAGAGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS CCA 72 bp | ATTCTCTTTCAACCCTCTAGGGAACTCAGGAAACATTaGGCTATTGTCCATAATGTGGTGATGGTGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: ILFQPSRELRKH*AIVHNVVMVVV Trigger: CACCACCACCATCACCACATTATGGACAATAGCCCAATGTTTCCTGAGTTCCCTAGAGGGTTGAAAGAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS CCA 72 bp | AATTTTATGTCAGCTCATGGTTTCTTCAGCCAGTTCTaGATCCCAGCACAGCCCAACTCCTTGAAAACGTCT | + |
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Preference number: 6 (lower is better) Translates to: NFMSAHGFFSQF*IPAQPNSLKTS Trigger: AGACGTTTTCAAGGAGTTGGGCTGTGCTGGGATCCAGAACTGGCTGAAGAAACCATGAGCTGACATAAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS CCA 72 bp | TCAAGGCATCCTTCTTCCCATCTGGTCTCTTGTCATTaGATCAAATTAATGAGTGCCTGTCCCAACTATGTG | + |
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Preference number: 6 (lower is better) Translates to: SRHPSSHLVSCH*IKLMSACPNYV Trigger: CACATAGTTGGGACAGGCACTCATTAATTTGATCCAATGACAAGAGACCAGATGGGAAGAAGGATGCCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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| CDS CCA 72 bp | AATTTAATTTCCAAATGGAGCCTCCATTCTGCTAGGTaGCAGAAATTTTATGTCAGCTCATGGTTTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: NLISKWSLHSAR*QKFYVSSWFLQ Trigger: CTGAAGAAACCATGAGCTGACATAAAATTTCTGCCACCTAGCAGAATGGAGGCTCCATTTGGAAATTAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000417473.6 ENST00000432665.2 ENST00000658552.1 ENST00000661605.1 ENST00000666797.1 ENST00000668851.1 ENST00000670478.1 ENST00000675665.1 |
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