Pregenerated sensors for LINC00567 (Homo sapiens)
Ensembl gene IDs: ENSG00000259831Ensembl transcript IDs: ENST00000569854.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCACTTACTCCCCGAGCCCTTCCCTCCACGGCCAGGCCCGCAGTGTaGGTGCCAGGGCCTTCGGCGAAGCCCAGGGAAGCCCAGCGCCCT | + |
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Preference number: 5 (lower is better) Translates to: ALTPRALPSTARPAV*VPGPSAKPREAQRP Trigger: AGGGCGCTGGGCTTCCCTGGGCTTCGCCGAAGGCCCTGGCACTCACACTGCGGGCCTGGCCGTGGAGGGAAGGGCTCGGGGAGTAAGTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS GCA 90 bp | GGTCGGTTGAAGCCAGGGCCGCAAACGTGCTCCCTGCCGCCCCACTaGCTGGCCGACACACTCACGGGTGCCGGGGCCACTGCACGCATG | + |
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Preference number: 5 (lower is better) Translates to: GRLKPGPQTCSLPPH*LADTLTGAGATARM Trigger: CATGCGTGCAGTGGCCCCGGCACCCGTGAGTGTGTCGGCCAGGCAGTGGGGCGGCAGGGAGCACGTTTGCGGCCCTGGCTTCAACCGACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS GCA 90 bp | CTCACGGGTGCCGGGGCCACTGCACGCATGACAGTGCCAGGAGCGTaGACTTACTCCCCGAGCCCTTCCCTCCACGGCCAGGCCCGCAGT | + |
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Preference number: 5 (lower is better) Translates to: LTGAGATARMTVPGA*TYSPSPSLHGQARS Trigger: ACTGCGGGCCTGGCCGTGGAGGGAAGGGCTCGGGGAGTAAGTGCACGCTCCTGGCACTGTCATGCGTGCAGTGGCCCCGGCACCCGTGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS TCA 90 bp | ACTGCCTGGCCGACACACTCACGGGTGCCGGGGCCACTGCACGCATaGCAGTGCCAGGAGCGTGCACTTACTCCCCGAGCCCTTCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: TAWPTHSRVPGPLHA*QCQERALTPRALPS Trigger: GGAGGGAAGGGCTCGGGGAGTAAGTGCACGCTCCTGGCACTGTCATGCGTGCAGTGGCCCCGGCACCCGTGAGTGTGTCGGCCAGGCAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS GCA 90 bp | AACGTGCTCCCTGCCGCCCCACTGCCTGGCCGACACACTCACGGGTaGCGGGGCCACTGCACGCATGACAGTGCCAGGAGCGTGCACTTA | + |
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Preference number: 5 (lower is better) Translates to: NVLPAAPLPGRHTHG*RGHCTHDSARSVHL Trigger: TAAGTGCACGCTCCTGGCACTGTCATGCGTGCAGTGGCCCCGGCACCCGTGAGTGTGTCGGCCAGGCAGTGGGGCGGCAGGGAGCACGTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS CCA 90 bp | CTGCCTCCCGCCCGGCTAAGGGAGGGCGGTTTCAGACAGATCCACTaGAGGGCAGATCTCCAGAGCCGGGAGCCAAAGGGGGCTGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: LPPARLREGGFRQIH*RADLQSREPKGAVA Trigger: TGCCACAGCCCCCTTTGGCTCCCGGCTCTGGAGATCTGCCCTCCAGTGGATCTGTCTGAAACCGCCCTCCCTTAGCCGGGCGGGAGGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS TCA 90 bp | GAAGCCCAGGGAAGCCCAGCGCCCTCGCCCTGGTCCTTTGACACATaGCGAGACCTCCTCTGGGCAGAGGCCCCTGGATTCTGGGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: EAQGSPAPSPWSFDT*RDLLWAEAPGFWGF Trigger: AAAGCCCCAGAATCCAGGGGCCTCTGCCCAGAGGAGGTCTCGTCATGTGTCAAAGGACCAGGGCGAGGGCGCTGGGCTTCCCTGGGCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS TCA 90 bp | CAGAGCTCCAAAGCGGTGGAACTCGGAATTGAAGCCCAGGTCGGTTaGAGCCAGGGCCGCAAACGTGCTCCCTGCCGCCCCACTGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: QSSKAVELGIEAQVG*SQGRKRAPCRPTAW Trigger: CCAGGCAGTGGGGCGGCAGGGAGCACGTTTGCGGCCCTGGCTTCAACCGACCTGGGCTTCAATTCCGAGTTCCACCGCTTTGGAGCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS GCA 90 bp | AGTCTCCATTCCTTAAGCGCCCAGAGCTCCCTCTGCGCTCTCCTGTaGCCGCGTCTCCTCTGTTCTGTTTCGTTCCGCTCTGCTTCGGGC | + |
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Preference number: 5 (lower is better) Translates to: SLHSLSAQSSLCALL*PRLLCSVSFRSASG Trigger: GCCCGAAGCAGAGCGGAACGAAACAGAACAGAGGAGACGCGGGCACAGGAGAGCGCAGAGGGAGCTCTGGGCGCTTAAGGAATGGAGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS TCA 90 bp | CCATTATCCATGGCCACAGAGCTCCAAAGCGGTGGAACTCGGAATTaGAGCCCAGGTCGGTTGAAGCCAGGGCCGCAAACGTGCTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: PLSMATELQSGGTRN*SPGRLKPGPQTCSL Trigger: CAGGGAGCACGTTTGCGGCCCTGGCTTCAACCGACCTGGGCTTCAATTCCGAGTTCCACCGCTTTGGAGCTCTGTGGCCATGGATAATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS GCA 90 bp | ACCAAGGTTGAGCCCAGGTTAGGAAAGTTTAACCTCCCAGCTGGGTaGTCCAGCCCCAATAGCGTCGCGATGCTGGGGACGAGGTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: TKVEPRLGKFNLPAG*SSPNSVAMLGTRSR Trigger: CCTAGACCTCGTCCCCAGCATCGCGACGCTATTGGGGCTGGAGCACCCAGCTGGGAGGTTAAACTTTCCTAACCTGGGCTCAACCTTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS CCA 90 bp | CCCAATGACCTTGACGTCTGGTGTTTGTCTGGTGCAATACGTCAGTaGGGAGACGGTCGTGCTAACAGCGTATTCGGCTCAGCAAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: PNDLDVWCLSGAIRQ*GDGRANSVFGSAKA Trigger: AGCTTTTGCTGAGCCGAATACGCTGTTAGCACGACCGTCTCCCCACTGACGTATTGCACCAGACAAACACCAGACGTCAAGGTCATTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS GCA 90 bp | GGTCGTGCTAACAGCGTATTCGGCTCAGCAAAAGCTTTCATTGCATaGATCCATGGCCTCTTTGCAAAGATGGGAACAGCACGTCTCAAT | + |
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Preference number: 5 (lower is better) Translates to: GRANSVFGSAKAFIA*IHGLFAKMGTARLN Trigger: ATTGAGACGTGCTGTTCCCATCTTTGCAAAGAGGCCATGGATGCATGCAATGAAAGCTTTTGCTGAGCCGAATACGCTGTTAGCACGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS TCA 90 bp | ATGGATCTACCCCAAGGGTGCAGAACGACTCCTGCACAAGTGCACTaGGCACGGTGGTATTTGTCAAAGCAAGATAACGGAAATAATTTA | + |
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Preference number: 5 (lower is better) Translates to: MDLPQGCRTTPAQVH*ARWYLSKQDNGNNL Trigger: TAAATTATTTCCGTTATCTTGCTTTGACAAATACCACCGTGCTCAGTGCACTTGTGCAGGAGTCGTTCTGCACCCTTGGGGTAGATCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS TCA 72 bp | CCCCGAGCCCTTCCCTCCACGGCCAGGCCCGCAGTGTaGGTGCCAGGGCCTTCGGCGAAGCCCAGGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: PRALPSTARPAV*VPGPSAKPREA Trigger: GGCTTCCCTGGGCTTCGCCGAAGGCCCTGGCACTCACACTGCGGGCCTGGCCGTGGAGGGAAGGGCTCGGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS CCA 72 bp | CAGGGCCGCAAACGTGCTCCCTGCCGCCCCACTGCCTaGCCGACACACTCACGGGTGCCGGGGCCACTGCAC | + |
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Preference number: 6 (lower is better) Translates to: QGRKRAPCRPTA*PTHSRVPGPLH Trigger: GTGCAGTGGCCCCGGCACCCGTGAGTGTGTCGGCCAGGCAGTGGGGCGGCAGGGAGCACGTTTGCGGCCCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS GCA 72 bp | GAGCCCTTCCCTCCACGGCCAGGCCCGCAGTGTGAGTaGCAGGGCCTTCGGCGAAGCCCAGGGAAGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: EPFPPRPGPQCE*QGLRRSPGKPS Trigger: GCTGGGCTTCCCTGGGCTTCGCCGAAGGCCCTGGCACTCACACTGCGGGCCTGGCCGTGGAGGGAAGGGCTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS GCA 72 bp | CCTGCCGCCCCACTGCCTGGCCGACACACTCACGGGTaGCGGGGCCACTGCACGCATGACAGTGCCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: PAAPLPGRHTHG*RGHCTHDSARS Trigger: GCTCCTGGCACTGTCATGCGTGCAGTGGCCCCGGCACCCGTGAGTGTGTCGGCCAGGCAGTGGGGCGGCAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS GCA 72 bp | AAGCCAGGGCCGCAAACGTGCTCCCTGCCGCCCCACTaGCTGGCCGACACACTCACGGGTGCCGGGGCCACT | + |
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Preference number: 6 (lower is better) Translates to: KPGPQTCSLPPH*LADTLTGAGAT Trigger: AGTGGCCCCGGCACCCGTGAGTGTGTCGGCCAGGCAGTGGGGCGGCAGGGAGCACGTTTGCGGCCCTGGCTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS GCA 72 bp | AGGCGAGACAGGCTGACTCCCCCAGGAGGACCGCGCTaGCTGGGGGAGGCGAATGCAGGGCCCATGAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: RRDRLTPPGGPR*LGEANAGPMRH Trigger: GTGCCTCATGGGCCCTGCATTCGCCTCCCCCAGGCAGCGCGGTCCTCCTGGGGGAGTCAGCCTGTCTCGCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS CCA 72 bp | GGGCAGATCTCCAGAGCCGGGAGCCAAAGGGGGCTGTaGCAGAAGGGGAGGCGGCCTTCGGGCTCAGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: GQISRAGSQRGL*QKGRRPSGSGE Trigger: CTCGCCTGAGCCCGAAGGCCGCCTCCCCTTCTGCCACAGCCCCCTTTGGCTCCCGGCTCTGGAGATCTGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS GCA 72 bp | GCCGGGGCCACTGCACGCATGACAGTGCCAGGAGCGTaGACTTACTCCCCGAGCCCTTCCCTCCACGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: AGATARMTVPGA*TYSPSPSLHGQ Trigger: CTGGCCGTGGAGGGAAGGGCTCGGGGAGTAAGTGCACGCTCCTGGCACTGTCATGCGTGCAGTGGCCCCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS TCA 72 bp | CCGACACACTCACGGGTGCCGGGGCCACTGCACGCATaGCAGTGCCAGGAGCGTGCACTTACTCCCCGAGCC | + |
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Preference number: 6 (lower is better) Translates to: PTHSRVPGPLHA*QCQERALTPRA Trigger: GGCTCGGGGAGTAAGTGCACGCTCCTGGCACTGTCATGCGTGCAGTGGCCCCGGCACCCGTGAGTGTGTCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS GCA 72 bp | CTGCCTGGCCGACACACTCACGGGTGCCGGGGCCACTaGACGCATGACAGTGCCAGGAGCGTGCACTTACTC | + |
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Preference number: 6 (lower is better) Translates to: LPGRHTHGCRGH*THDSARSVHLL Trigger: GAGTAAGTGCACGCTCCTGGCACTGTCATGCGTGCAGTGGCCCCGGCACCCGTGAGTGTGTCGGCCAGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS TCA 72 bp | GGAAGCCCAGCGCCCTCGCCCTGGTCCTTTGACACATaGCGAGACCTCCTCTGGGCAGAGGCCCCTGGATTC | + |
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Preference number: 6 (lower is better) Translates to: GSPAPSPWSFDT*RDLLWAEAPGF Trigger: GAATCCAGGGGCCTCTGCCCAGAGGAGGTCTCGTCATGTGTCAAAGGACCAGGGCGAGGGCGCTGGGCTTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS CCA 72 bp | TGTTCTGTGCTCCCTGCTGGGAAGCGCTGGGCTGGCTaGAGGTTTTCATCTCGGGACTGGGGGTGCATCCCC | + |
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Preference number: 6 (lower is better) Translates to: CSVLPAGKRWAG*RFSSRDWGCIP Trigger: GGGGATGCACCCCCAGTCCCGAGATGAAAACCTCCAGCCAGCCCAGCGCTTCCCAGCAGGGAGCACAGAACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS GCA 72 bp | TCCTTAAGCGCCCAGAGCTCCCTCTGCGCTCTCCTGTaGCCGCGTCTCCTCTGTTCTGTTTCGTTCCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SLSAQSSLCALL*PRLLCSVSFRS Trigger: AGAGCGGAACGAAACAGAACAGAGGAGACGCGGGCACAGGAGAGCGCAGAGGGAGCTCTGGGCGCTTAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS GCA 72 bp | GAGCCCAGGTTAGGAAAGTTTAACCTCCCAGCTGGGTaGTCCAGCCCCAATAGCGTCGCGATGCTGGGGACG | + |
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Preference number: 6 (lower is better) Translates to: EPRLGKFNLPAG*SSPNSVAMLGT Trigger: CGTCCCCAGCATCGCGACGCTATTGGGGCTGGAGCACCCAGCTGGGAGGTTAAACTTTCCTAACCTGGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS TCA 72 bp | ATGGCCACAGAGCTCCAAAGCGGTGGAACTCGGAATTaGAGCCCAGGTCGGTTGAAGCCAGGGCCGCAAACG | + |
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Preference number: 6 (lower is better) Translates to: MATELQSGGTRN*SPGRLKPGPQT Trigger: CGTTTGCGGCCCTGGCTTCAACCGACCTGGGCTTCAATTCCGAGTTCCACCGCTTTGGAGCTCTGTGGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS CAA 72 bp | CATGGCCACAGAGCTCCAAAGCGGTGGAACTCGGAATaGAAGCCCAGGTCGGTTGAAGCCAGGGCCGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: HGHRAPKRWNSE*KPRSVEARAAN Trigger: GTTTGCGGCCCTGGCTTCAACCGACCTGGGCTTCAATTCCGAGTTCCACCGCTTTGGAGCTCTGTGGCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS TCA 72 bp | TCTCGGGACTGGGGGTGCATCCCCACACTGCCTGGCTaGATATGTTGGTGCTTTCCCAATGACCTTGACGTC | + |
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Preference number: 6 (lower is better) Translates to: SRDWGCIPTLPG*ICWCFPNDLDV Trigger: GACGTCAAGGTCATTGGGAAAGCACCAACATATTCAGCCAGGCAGTGTGGGGATGCACCCCCAGTCCCGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS CAA 90 bp | TGCCCGCGTCTCCTCTGTTCTGTTTCGTTCCGCTCTGCTTCGGGCTaGTCTCAATTACATTTCCGTAAGGGTTCGGGTCCTCGGCTTACT | + |
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Preference number: 6 (lower is better) Translates to: CPRLLCSVSFRSASG*SQLHFRKGSGPRLT Trigger: AGTAAGCCGAGGACCCGAACCCTTACGGAAATGTAATTGAGACAAGCCCGAAGCAGAGCGGAACGAAACAGAACAGAGGAGACGCGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS CCA 72 bp | CTTGACGTCTGGTGTTTGTCTGGTGCAATACGTCAGTaGGGAGACGGTCGTGCTAACAGCGTATTCGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LDVWCLSGAIRQ*GDGRANSVFGS Trigger: TGAGCCGAATACGCTGTTAGCACGACCGTCTCCCCACTGACGTATTGCACCAGACAAACACCAGACGTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS CAA 90 bp | TCCCCACACTGCCTGGCTGAATATGTTGGTGCTTTCCCAATGACCTaGACGTCTGGTGTTTGTCTGGTGCAATACGTCAGTGGGGAGACG | + |
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Preference number: 6 (lower is better) Translates to: SPHCLAEYVGAFPMT*TSGVCLVQYVSGET Trigger: CGTCTCCCCACTGACGTATTGCACCAGACAAACACCAGACGTCAAGGTCATTGGGAAAGCACCAACATATTCAGCCAGGCAGTGTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS TCA 72 bp | CCCCAAGGGTGCAGAACGACTCCTGCACAAGTGCACTaGGCACGGTGGTATTTGTCAAAGCAAGATAACGGA | + |
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Preference number: 6 (lower is better) Translates to: PQGCRTTPAQVH*ARWYLSKQDNG Trigger: TCCGTTATCTTGCTTTGACAAATACCACCGTGCTCAGTGCACTTGTGCAGGAGTCGTTCTGCACCCTTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS GCA 72 bp | GCCTATGGATCTACCCCAAGGGTGCAGAACGACTCCTaGACAAGTGCACTGAGCACGGTGGTATTTGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: AYGSTPRVQNDS*TSALSTVVFVK Trigger: TTTGACAAATACCACCGTGCTCAGTGCACTTGTGCAGGAGTCGTTCTGCACCCTTGGGGTAGATCCATAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS CAA 72 bp | CTCCTCTGTTCTGTTTCGTTCCGCTCTGCTTCGGGCTaGTCTCAATTACATTTCCGTAAGGGTTCGGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLCSVSFRSASG*SQLHFRKGSGP Trigger: AGGACCCGAACCCTTACGGAAATGTAATTGAGACAAGCCCGAAGCAGAGCGGAACGAAACAGAACAGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS GCA 72 bp | ATCTACCCCAAGGGTGCAGAACGACTCCTGCACAAGTaGACTGAGCACGGTGGTATTTGTCAAAGCAAGATA | + |
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Preference number: 6 (lower is better) Translates to: IYPKGAERLLHK*TEHGGICQSKI Trigger: TATCTTGCTTTGACAAATACCACCGTGCTCAGTGCACTTGTGCAGGAGTCGTTCTGCACCCTTGGGGTAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS CAA 72 bp | TGCCTGGCTGAATATGTTGGTGCTTTCCCAATGACCTaGACGTCTGGTGTTTGTCTGGTGCAATACGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: CLAEYVGAFPMT*TSGVCLVQYVS Trigger: ACTGACGTATTGCACCAGACAAACACCAGACGTCAAGGTCATTGGGAAAGCACCAACATATTCAGCCAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS GCA 72 bp | AACAGCGTATTCGGCTCAGCAAAAGCTTTCATTGCATaGATCCATGGCCTCTTTGCAAAGATGGGAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: NSVFGSAKAFIA*IHGLFAKMGTA Trigger: TGCTGTTCCCATCTTTGCAAAGAGGCCATGGATGCATGCAATGAAAGCTTTTGCTGAGCCGAATACGCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS TCA 72 bp | TTTACTAAGCATCTTCATTGCTGGCCCTGTGTTAGATaGCAGCATAAACCAGCAAGACAGACCAGGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: FTKHLHCWPCVR*QHKPARQTRLK Trigger: CTTCAGCCTGGTCTGTCTTGCTGGTTTATGCTGTCATCTAACACAGGGCCAGCAATGAAGATGCTTAGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS CAA 72 bp | GGGCCTGAGAACTGTGTAGGATGTTTACTTAGTGCTTaGAAAGAACTCACTGCATCCCCTCAACAATCCTTT | + |
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Preference number: 6 (lower is better) Translates to: GPENCVGCLLSA*KELTASPQQSF Trigger: AAAGGATTGTTGAGGGGATGCAGTGAGTTCTTTCAAAGCACTAAGTAAACATCCTACACAGTTCTCAGGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS CAA 90 bp | TATTCGGCTCAGCAAAAGCTTTCATTGCATGCATCCATGGCCTCTTaGCAAAGATGGGAACAGCACGTCTCAATAACACACAATTTCATC | + |
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Preference number: 6 (lower is better) Translates to: YSAQQKLSLHASMAS*QRWEQHVSITHNFI Trigger: GATGAAATTGTGTGTTATTGAGACGTGCTGTTCCCATCTTTGCAAAGAGGCCATGGATGCATGCAATGAAAGCTTTTGCTGAGCCGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS CCA 72 bp | CTTTCATTGCATGCATCCATGGCCTCTTTGCAAAGATaGGAACAGCACGTCTCAATAACACACAATTTCATC | + |
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Preference number: 6 (lower is better) Translates to: LSLHASMASLQR*EQHVSITHNFI Trigger: GATGAAATTGTGTGTTATTGAGACGTGCTGTTCCCATCTTTGCAAAGAGGCCATGGATGCATGCAATGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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| CDS TCA 72 bp | AACTGTAAACAGGTAAAATTTCCATGGAAGGTTCTTTaGCGACAGCTAACAAAATTTAATACGCATGACGTC | + |
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Preference number: 6 (lower is better) Translates to: NCKQVKFPWKVL*RQLTKFNTHDV Trigger: GACGTCATGCGTATTAAATTTTGTTAGCTGTCGTCAAAGAACCTTCCATGGAAATTTTACCTGTTTACAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569854.1 |
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