Pregenerated sensors for LINC00565 (Homo sapiens)
Ensembl gene IDs: ENSG00000260910Ensembl transcript IDs: ENST00000562710.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCAGGTGGGGAGGCTCACACACAGGCCAGAGGCTTCCCTGGAAACTaGCGCCCTAGGGCAGGTCCAGCTCCTGGATGGTCGCAGGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: AGGEAHTQARGFPGN*RPRAGPAPGWSQVK Trigger: CTTCACCTGCGACCATCCAGGAGCTGGACCTGCCCTAGGGCGTCAGTTTCCAGGGAAGCCTCTGGCCTGTGTGTGAGCCTCCCCACCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 90 bp | GGGCTAAGGGTATGGGGACCTTCATATGTGGGACAGGCTCCTCGCTaGGGACGCTGCCACCAGGCCTGTGAGGCAGCCAGCCAAGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: GLRVWGPSYVGQAPR*GRCHQACEAASQVP Trigger: TGGAACTTGGCTGGCTGCCTCACAGGCCTGGTGGCAGCGTCCCCAGCGAGGAGCCTGTCCCACATATGAAGGTCCCCATACCCTTAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 90 bp | GTGTGTGTCTTTAATTCCTCTAGCGCCGCTGGGTTAGGGTCTCCCTaGCCGAGCTGGTCTCGGCAGGCGGAGACGACCGGGTGTCCACCA | + |
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Preference number: 5 (lower is better) Translates to: VCVFNSSSAAGLGSP*PSWSRQAETTGCPP Trigger: TGGTGGACACCCGGTCGTCTCCGCCTGCCGAGACCAGCTCGGTCAGGGAGACCCTAACCCAGCGGCGCTAGAGGAATTAAAGACACACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 90 bp | ATGGCCTCAGAGGCTGACACCGAGTGTGGTGTCCCTGGGTCACCGTaGTCCTTGGTTTGGTCCAGCAGGAGAAAGGGCAGCCTGCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: MASEADTECGVPGSP*SLVWSSRRKGSLPR Trigger: CCTTGGCAGGCTGCCCTTTCTCCTGCTGGACCAAACCAAGGAGCACGGTGACCCAGGGACACCACACTCGGTGTCAGCCTCTGAGGCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 90 bp | GAGGCCTGGCTCTCTGCCTCCCGGGAAGGTCTGTTTCTAATCCTGTaGTGGGTCTGCGTGGCTCCATGGCCTCAGAGGCTGACACCGAGT | + |
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Preference number: 5 (lower is better) Translates to: EAWLSASREGLFLIL*WVCVAPWPQRLTPS Trigger: ACTCGGTGTCAGCCTCTGAGGCCATGGAGCCACGCAGACCCAGCACAGGATTAGAAACAGACCTTCCCGGGAGGCAGAGAGCCAGGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 90 bp | GTATGGGGACCTTCATATGTGGGACAGGCTCCTCGCTGGGGACGCTaGCACCAGGCCTGTGAGGCAGCCAGCCAAGTTCCACTTGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: VWGPSYVGQAPRWGR*HQACEAASQVPLAA Trigger: TGCAGCAAGTGGAACTTGGCTGGCTGCCTCACAGGCCTGGTGGCAGCGTCCCCAGCGAGGAGCCTGTCCCACATATGAAGGTCCCCATAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 90 bp | CCCATTCCAGAGAGGGTCCCACCCACACCCAGAAGGAGAGGGCGCTaGTCAGAGAGGCCAAGGAGAATCCAGACACACAGACCAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: PIPERVPPTPRRRGR*SERPRRIQTHRPGW Trigger: CCAGCCTGGTCTGTGTGTCTGGATTCTCCTTGGCCTCTCTGAGCAGCGCCCTCTCCTTCTGGGTGTGGGTGGGACCCTCTCTGGAATGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 90 bp | GCCTGGCTCTCTGCCTCCCGGGAAGGTCTGTTTCTAATCCTGTGCTaGGTCTGCGTGGCTCCATGGCCTCAGAGGCTGACACCGAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: AWLSASREGLFLILC*VCVAPWPQRLTPSV Trigger: CACACTCGGTGTCAGCCTCTGAGGCCATGGAGCCACGCAGACCCAGCACAGGATTAGAAACAGACCTTCCCGGGAGGCAGAGAGCCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 90 bp | CAAGGGTGCTGGGAGGTCCCACTTTGTACCCTCTCCCGAGAGCTTTaGGGGGTACCTGCCGCCTCTAGCTGTGCCTTCTCTGTGCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: QGCWEVPLCTLSREL*GVPAASSCAFSVPF Trigger: GAAGGGCACAGAGAAGGCACAGCTAGAGGCGGCAGGTACCCCTCAAAGCTCTCGGGAGAGGGTACAAAGTGGGACCTCCCAGCACCCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 90 bp | AGCTTCCACTCCCGTCTTTCTCGTGTCCTCTGGTCCAGCCCCTGGTaGGCTCCAGCCAAGCACCGCCTACTGGGCCTCTGGTCTTTACCT | + |
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Preference number: 5 (lower is better) Translates to: SFHSRLSRVLWSSPW*APAKHRLLGLWSLP Trigger: AGGTAAAGACCAGAGGCCCAGTAGGCGGTGCTTGGCTGGAGCTCACCAGGGGCTGGACCAGAGGACACGAGAAAGACGGGAGTGGAAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 90 bp | CTCTCTGCCTCCCGGGAAGGTCTGTTTCTAATCCTGTGCTGGGTCTaGGTGGCTCCATGGCCTCAGAGGCTGACACCGAGTGTGGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: LSASREGLFLILCWV*VAPWPQRLTPSVVS Trigger: GGACACCACACTCGGTGTCAGCCTCTGAGGCCATGGAGCCACGCAGACCCAGCACAGGATTAGAAACAGACCTTCCCGGGAGGCAGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 90 bp | CAATTATTCATTGCGTCTTCCTGGCCACAGCTCATTCAGCACTACTaGAGATCCGGCCAGACCCCCAGGAGCCGCGGCCCCTGCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: QLFIASSWPQLIQHY*RSGQTPRSRGPCTA Trigger: GGCTGTGCAGGGGCCGCGGCTCCTGGGGGTCTGGCCGGATCTGCAGTAGTGCTGAATGAGCTGTGGCCAGGAAGACGCAATGAATAATTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 90 bp | CGGGAAGGTCTGTTTCTAATCCTGTGCTGGGTCTGCGTGGCTCCATaGCCTCAGAGGCTGACACCGAGTGTGGTGTCCCTGGGTCACCGT | + |
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Preference number: 5 (lower is better) Translates to: REGLFLILCWVCVAP*PQRLTPSVVSLGHR Trigger: ACGGTGACCCAGGGACACCACACTCGGTGTCAGCCTCTGAGGCCATGGAGCCACGCAGACCCAGCACAGGATTAGAAACAGACCTTCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 90 bp | CAGCTTTGTCTCCTTGCATGCAGCCCTCTCAGGGCTTTTGAGGCCTaGAGGCCAAGGGTGCTGGGAGGTCCCACTTTGTACCCTCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: QLCLLACSPLRAFEA*RPRVLGGPTLYPLP Trigger: CGGGAGAGGGTACAAAGTGGGACCTCCCAGCACCCTTGGCCTCCAGGCCTCAAAAGCCCTGAGAGGGCTGCATGCAAGGAGACAAAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 90 bp | CCCAACTACACTGATGGAGCGACCGTCTACACAGGGATCCTACGGTaGGGAGTGAGCCTTGCTGGCCTGATGCATGGCAGTGGTTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: PNYTDGATVYTGILR*GVSLAGLMHGSGSC Trigger: GCAGGAACCACTGCCATGCATCAGGCCAGCAAGGCTCACTCCCCACCGTAGGATCCCTGTGTAGACGGTCGCTCCATCAGTGTAGTTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 90 bp | ATTGGCCCCAACAGGCCTTCTTCACCAACGGGGACAGCAGTCCCTTaGGTGGAGCCCTGGACTCAGGGAGCTCTGGTCAGTGAAACTCTC | + |
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Preference number: 5 (lower is better) Translates to: IGPNRPSSPTGTAVP*VEPWTQGALVSETL Trigger: GAGAGTTTCACTGACCAGAGCTCCCTGAGTCCAGGGCTCCACTCAAGGGACTGCTGTCCCCGTTGGTGAAGAAGGCCTGTTGGGGCCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 90 bp | TGGCTGCATCTGAATTCACCAGCGTTTCCAGCTCCTGAGGCCATGTaGGGTGTCACCTCACTCCTGGCAGACAGACTCCCACTCGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: WLHLNSPAFPAPEAM*GVTSLLADRLPLGG Trigger: TCCTCCGAGTGGGAGTCTGTCTGCCAGGAGTGAGGTGACACCGCACATGGCCTCAGGAGCTGGAAACGCTGGTGAATTCAGATGCAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 90 bp | TCCAGCAAGTCTCTTGGAAACATGTGCATGTGGCCCCAGGCGACGTaGGGGGTGCAGTCTGCCTGCGTTATGCAATGCTCAGGCCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: SSKSLGNMCMWPQAT*GVQSACVMQCSGQF Trigger: AAACTGGCCTGAGCATTGCATAACGCAGGCAGACTGCACCCCTCACGTCGCCTGGGGCCACATGCACATGTTTCCAAGAGACTTGCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 90 bp | CTGAGTGCTGCCTTGTCATGCTATAAACCAGGAGGCCTGGCTCTCTaGCTCCCGGGAAGGTCTGTTTCTAATCCTGTGCTGGGTCTGCGT | + |
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Preference number: 5 (lower is better) Translates to: LSAALSCYKPGGLAL*LPGRSVSNPVLGLR Trigger: ACGCAGACCCAGCACAGGATTAGAAACAGACCTTCCCGGGAGGCAGAGAGCCAGGCCTCCTGGTTTATAGCATGACAAGGCAGCACTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 90 bp | TTAGAAGCTTTGGCTGCATCTGAATTCACCAGCGTTTCCAGCTCCTaGGGCCATGTGCGGTGTCACCTCACTCCTGGCAGACAGACTCCC | + |
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Preference number: 5 (lower is better) Translates to: LEALAASEFTSVSSS*GHVRCHLTPGRQTP Trigger: GGGAGTCTGTCTGCCAGGAGTGAGGTGACACCGCACATGGCCTCAGGAGCTGGAAACGCTGGTGAATTCAGATGCAGCCAAAGCTTCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 90 bp | GCCTGCGTTATGCAATGCTCAGGCCAGTTTTCCCTGAGAGAGGAATaGTGCCGATCCTCTGCGGTAACCCACAAAACTCCACGGAGATGC | + |
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Preference number: 5 (lower is better) Translates to: ACVMQCSGQFSLREE*CRSSAVTHKTPRRC Trigger: GCATCTCCGTGGAGTTTTGTGGGTTACCGCAGAGGATCGGCAGCATTCCTCTCTCAGGGAAAACTGGCCTGAGCATTGCATAACGCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 90 bp | CTTCTCTGTGCCCTTCAACTCTGGAGTGAGGTCAGATCTTGGCTCTaGGGCCACCACCAGCTGTTTCAGGCTTGCAAAGTTCTGTCCGAC | + |
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Preference number: 5 (lower is better) Translates to: LLCALQLWSEVRSWL*GHHQLFQACKVLSD Trigger: GTCGGACAGAACTTTGCAAGCCTGAAACAGCTGGTGGTGGCCCCAGAGCCAAGATCTGACCTCACTCCAGAGTTGAAGGGCACAGAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 90 bp | CTGTGCCTTCTCTGTGCCCTTCAACTCTGGAGTGAGGTCAGATCTTaGCTCTGGGGCCACCACCAGCTGTTTCAGGCTTGCAAAGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: LCLLCALQLWSEVRS*LWGHHQLFQACKVL Trigger: CAGAACTTTGCAAGCCTGAAACAGCTGGTGGTGGCCCCAGAGCCAAGATCTGACCTCACTCCAGAGTTGAAGGGCACAGAGAAGGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 90 bp | CGCTGCTCAGAGAGGCCAAGGAGAATCCAGACACACAGACCAGGCTaGCTTTCCCCACTCAGTCCATTAGCATCAGATCCAGCTAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: RCSERPRRIQTHRPG*LSPLSPLASDPAKP Trigger: AGGCTTAGCTGGATCTGATGCTAATGGACTGAGTGGGGAAAGCCAGCCTGGTCTGTGTGTCTGGATTCTCCTTGGCCTCTCTGAGCAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 90 bp | TTCAACTGCAAAGTACAAGTCCTGGGCTATCTCCTCCTGCTCTGCTaGAGGCCACATCGATGCTTGGAAGGTAGGGTCAGCCCAGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: FNCKVQVLGYLLLLC*RPHRCLEGRVSPVP Trigger: AGGGACTGGGCTGACCCTACCTTCCAAGCATCGATGTGGCCTTCAGCAGAGCAGGAGGAGATAGCCCAGGACTTGTACTTTGCAGTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 90 bp | TCTGGCACTTCAACTGCAAAGTACAAGTCCTGGGCTATCTCCTCCTaGTCTGCTGAAGGCCACATCGATGCTTGGAAGGTAGGGTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: SGTSTAKYKSWAISS*SAEGHIDAWKVGSA Trigger: GGCTGACCCTACCTTCCAAGCATCGATGTGGCCTTCAGCAGAGCAGGAGGAGATAGCCCAGGACTTGTACTTTGCAGTTGAAGTGCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 90 bp | AATGATGGGGTTCCAAAAACTCCCAGGGTGGTGAATTCATCCAGATaGCGGGAGGGAGGACGGTGCACTGCAACCCAGGTTGTTAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: NDGVPKTPRVVNSSR*REGGRCTATQVVSL Trigger: GAGACTAACAACCTGGGTTGCAGTGCACCGTCCTCCCTCCCGGCATCTGGATGAATTCACCACCCTGGGAGTTTTTGGAACCCCATCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 90 bp | GACAACTCCCATGGCCTCCTGGGTGTCCTGCAAAGGCTTTGTCACTaGTGTCACTCCTCCAGGCCTCAGATAATTCCAGATACACAAGCG | + |
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Preference number: 5 (lower is better) Translates to: DNSHGLLGVLQRLCH*CHSSRPQIIPDTQA Trigger: CGCTTGTGTATCTGGAATTATCTGAGGCCTGGAGGAGTGACACCAGTGACAAAGCCTTTGCAGGACACCCAGGAGGCCATGGGAGTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 90 bp | TGCGTTATGCAATGCTCAGGCCAGTTTTCCCTGAGAGAGGAATGCTaGCGATCCTCTGCGGTAACCCACAAAACTCCACGGAGATGCTTG | + |
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Preference number: 5 (lower is better) Translates to: CVMQCSGQFSLREEC*RSSAVTHKTPRRCL Trigger: CAAGCATCTCCGTGGAGTTTTGTGGGTTACCGCAGAGGATCGGCAGCATTCCTCTCTCAGGGAAAACTGGCCTGAGCATTGCATAACGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 90 bp | ACTCCCAGGGTGGTGAATTCATCCAGATGCCGGGAGGGAGGACGGTaGACTGCAACCCAGGTTGTTAGTCTCAGAATTGAATGGAATTCC | + |
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Preference number: 5 (lower is better) Translates to: TPRVVNSSRCREGGR*TATQVVSLRIEWNS Trigger: GGAATTCCATTCAATTCTGAGACTAACAACCTGGGTTGCAGTGCACCGTCCTCCCTCCCGGCATCTGGATGAATTCACCACCCTGGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 90 bp | ACCTCACCAGTGGTCACAGTCACAGGTGCTGACATGGAGAAGGATTaGTGCGTCCTCCTGAGTGCTGCCTTGTCATGCTATAAACCAGGA | + |
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Preference number: 5 (lower is better) Translates to: TSPVVTVTGADMEKD*CVLLSAALSCYKPG Trigger: TCCTGGTTTATAGCATGACAAGGCAGCACTCAGGAGGACGCATCAATCCTTCTCCATGTCAGCACCTGTGACTGTGACCACTGGTGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 90 bp | CGGAGGATGATTTTTCATAGCCAGGGTCGCTCTGTGGACCTTGGATaGACCAACGTGCTTTCCATGTCCAACTTTGTCAAGATCCGGGGA | + |
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Preference number: 5 (lower is better) Translates to: RRMIFHSQGRSVDLG*TNVLSMSNFVKIRG Trigger: TCCCCGGATCTTGACAAAGTTGGACATGGAAAGCACGTTGGTCCATCCAAGGTCCACAGAGCGACCCTGGCTATGAAAAATCATCCTCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 90 bp | GAGCTTCTCCCATCCTCTGTGTCTCAGTACCACTCTCACTCAAGGTaGCATAGAAATGGGAATCCTTCTTCCCCACAGTGGGTCCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: ELLPSSVSQYHSHSR*HRNGNPSSPQWVLE Trigger: TTCTAGGACCCACTGTGGGGAAGAAGGATTCCCATTTCTATGGCACCTTGAGTGAGAGTGGTACTGAGACACAGAGGATGGGAGAAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 90 bp | TTTTTCATAGCCAGGGTCGCTCTGTGGACCTTGGATGGACCAACGTaGTTTCCATGTCCAACTTTGTCAAGATCCGGGGAAGATTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: FFIARVALWTLDGPT*FPCPTLSRSGEDSP Trigger: TGGAGAATCTTCCCCGGATCTTGACAAAGTTGGACATGGAAAGCACGTTGGTCCATCCAAGGTCCACAGAGCGACCCTGGCTATGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 90 bp | TTTGCATTTCTTAGGTCTGGCACTTCAACTGCAAAGTACAAGTCCTaGGCTATCTCCTCCTGCTCTGCTGAAGGCCACATCGATGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: FAFLRSGTSTAKYKS*AISSCSAEGHIDAW Trigger: CCAAGCATCGATGTGGCCTTCAGCAGAGCAGGAGGAGATAGCCCAGGACTTGTACTTTGCAGTTGAAGTGCCAGACCTAAGAAATGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 90 bp | CTCGAACACGCGGGATATCTGGAAGCAAGCCTTATCGGTTATAGGTaGATTCAGAGAGTCTTCAGTTTGCGGCTGGTTAAAGGAGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: LEHAGYLEASLIGYR*IQRVFSLRLVKGAK Trigger: CTTTGCTCCTTTAACCAGCCGCAAACTGAAGACTCTCTGAATCCACCTATAACCGATAAGGCTTGCTTCCAGATATCCCGCGTGTTCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 90 bp | GAAAGCAGATCTGTGGTTTCCAGAGGATGGGGAAGGAATGAGGAGTaGTTACTTAATGGGGATGAGCTGTTGTTCTGGAGGGATGAAATG | + |
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Preference number: 5 (lower is better) Translates to: ESRSVVSRGWGRNEE*LLNGDELLFWRDEM Trigger: CATTTCATCCCTCCAGAACAACAGCTCATCCCCATTAAGTAATCACTCCTCATTCCTTCCCCATCCTCTGGAAACCACAGATCTGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 90 bp | TGTGTTTTAGAGGGTTATGCCCATGAGCGAGCCTACCTATACATGTaGAGTGTCACATTACTGAGACGATTCTGTTTAGAGCAAAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: CVLEGYAHERAYLYM*SVTLLRRFCLEQSH Trigger: GTGGCTTTGCTCTAAACAGAATCGTCTCAGTAATGTGACACTGCACATGTATAGGTAGGCTCGCTCATGGGCATAACCCTCTAAAACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 90 bp | AAACTGGGTGGTGTGGGAAATAAAAACCTGATAGGTTTGGGATCATaGGAGAAAGAGATACCCTTTAGCCACCTTCTCTGTTTCCTCATG | + |
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Preference number: 5 (lower is better) Translates to: KLGGVGNKNLIGLGS*EKEIPFSHLLCFLM Trigger: CATGAGGAAACAGAGAAGGTGGCTAAAGGGTATCTCTTTCTCTCATGATCCCAAACCTATCAGGTTTTTATTTCCCACACCACCCAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 90 bp | AGAAGTGAGACACAAACGTTCGCACACCGCGTGATTCCTTTTATATaGAATATCCAAAACGGACAAATCCATAGAGACAGAAAGCAGATC | + |
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Preference number: 5 (lower is better) Translates to: RSETQTFAHRVIPFI*NIQNGQIHRDRKQI Trigger: GATCTGCTTTCTGTCTCTATGGATTTGTCCGTTTTGGATATTTCATATAAAAGGAATCACGCGGTGTGCGAACGTTTGTGTCTCACTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 90 bp | TCTATAAAAACAATGCTTATCACTGGCTTGCTGTCAATAAATATGTaGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAGGCTGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: SIKTMLITGLLSINM*VNLCSRLSALKAVS Trigger: GCTGACAGCCTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGACAGCAAGCCAGTGATAAGCATTGTTTTTATAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | TGCAGATCCGGCCAGACCCCCAGGAGCCGCGGCCCCTaGACAGCCAAGGCCAAGAAGCTCCCATCGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: CRSGQTPRSRGP*TAKAKKLPSWR Trigger: CCTCCACGATGGGAGCTTCTTGGCCTTGGCTGTGCAGGGGCCGCGGCTCCTGGGGGTCTGGCCGGATCTGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 72 bp | TGTGCTGGGTCTGCGTGGCTCCATGGCCTCAGAGGCTaGCACCGAGTGTGGTGTCCCTGGGTCACCGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: CAGSAWLHGLRG*HRVWCPWVTVL Trigger: GAGCACGGTGACCCAGGGACACCACACTCGGTGTCAGCCTCTGAGGCCATGGAGCCACGCAGACCCAGCACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 72 bp | TCCCGTCTTTCTCGTGTCCTCTGGTCCAGCCCCTGGTaGGCTCCAGCCAAGCACCGCCTACTGGGCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SRLSRVLWSSPW*APAKHRLLGLW Trigger: CCAGAGGCCCAGTAGGCGGTGCTTGGCTGGAGCTCACCAGGGGCTGGACCAGAGGACACGAGAAAGACGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | ATTGCGTCTTCCTGGCCACAGCTCATTCAGCACTACTaGAGATCCGGCCAGACCCCCAGGAGCCGCGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: IASSWPQLIQHY*RSGQTPRSRGP Trigger: GGGGCCGCGGCTCCTGGGGGTCTGGCCGGATCTGCAGTAGTGCTGAATGAGCTGTGGCCAGGAAGACGCAAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | CTGCCCTGTCTCCTTCCCACCTACCGCCCTGAAGGCTaGTTCCGCCTCTGCCCAGACTGCAGATGCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LPCLLPTYRPEG*FRLCPDCRCSQ Trigger: CTGGGAGCATCTGCAGTCTGGGCAGAGGCGGAAGCAGCCTTCAGGGCGGTAGGTGGGAAGGAGACAGGGCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 72 bp | GGCCCAGCCACCCGAGCCCTCGTTGCCATCCACCACTaGGCATCAGCTTCCACTCCCGTCTTTCTCGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: GPATRALVAIHH*ASASTPVFLVS Trigger: GGACACGAGAAAGACGGGAGTGGAAGCTGATGCCCAGTGGTGGATGGCAACGAGGGCTCGGGTGGCTGGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CAA 72 bp | TGCATAAGCGACACGGCCCAGCCACCCGAGCCCTCGTaGCCATCCACCACTGGGCATCAGCTTCCACTCCCG | + |
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Preference number: 6 (lower is better) Translates to: CISDTAQPPEPS*PSTTGHQLPLP Trigger: CGGGAGTGGAAGCTGATGCCCAGTGGTGGATGGCAACGAGGGCTCGGGTGGCTGGGCCGTGTCGCTTATGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 72 bp | TTTAATTCCTCTAGCGCCGCTGGGTTAGGGTCTCCCTaGCCGAGCTGGTCTCGGCAGGCGGAGACGACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: FNSSSAAGLGSP*PSWSRQAETTG Trigger: CCCGGTCGTCTCCGCCTGCCGAGACCAGCTCGGTCAGGGAGACCCTAACCCAGCGGCGCTAGAGGAATTAAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | CCTTCATATGTGGGACAGGCTCCTCGCTGGGGACGCTaGCACCAGGCCTGTGAGGCAGCCAGCCAAGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PSYVGQAPRWGR*HQACEAASQVP Trigger: TGGAACTTGGCTGGCTGCCTCACAGGCCTGGTGGCAGCGTCCCCAGCGAGGAGCCTGTCCCACATATGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | GCCCTCTCAGGGCTTTTGAGGCCTGGAGGCCAAGGGTaGTGGGAGGTCCCACTTTGTACCCTCTCCCGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ALSGLLRPGGQG*WEVPLCTLSRE Trigger: CTCTCGGGAGAGGGTACAAAGTGGGACCTCCCAGCACCCTTGGCCTCCAGGCCTCAAAAGCCCTGAGAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | CCTGAAGGCTGCTTCCGCCTCTGCCCAGACTGCAGATaGTCCCAGGCTGTGTCCTCTGCCCGCCTCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PEGCFRLCPDCR*SQAVSSARLFS Trigger: AGAGAAGAGGCGGGCAGAGGACACAGCCTGGGAGCATCTGCAGTCTGGGCAGAGGCGGAAGCAGCCTTCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CAA 90 bp | CGTTTCCTCTGCATAAGCGACACGGCCCAGCCACCCGAGCCCTCGTaGCCATCCACCACTGGGCATCAGCTTCCACTCCCGTCTTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RFLCISDTAQPPEPS*PSTTGHQLPLPSFS Trigger: CGAGAAAGACGGGAGTGGAAGCTGATGCCCAGTGGTGGATGGCAACGAGGGCTCGGGTGGCTGGGCCGTGTCGCTTATGCAGAGGAAACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | GAGGCTGACACCGAGTGTGGTGTCCCTGGGTCACCGTaGTCCTTGGTTTGGTCCAGCAGGAGAAAGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EADTECGVPGSP*SLVWSSRRKGS Trigger: GCTGCCCTTTCTCCTGCTGGACCAAACCAAGGAGCACGGTGACCCAGGGACACCACACTCGGTGTCAGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 72 bp | CCAGCCCCTGGTGAGCTCCAGCCAAGCACCGCCTACTaGGCCTCTGGTCTTTACCTGTTCTGTTCCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PAPGELQPSTAY*ASGLYLFCSLC Trigger: GCAGAGGGAACAGAACAGGTAAAGACCAGAGGCCCAGTAGGCGGTGCTTGGCTGGAGCTCACCAGGGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | CTCTCTGCCTCCCGGGAAGGTCTGTTTCTAATCCTGTaGTGGGTCTGCGTGGCTCCATGGCCTCAGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSASREGLFLIL*WVCVAPWPQRL Trigger: CAGCCTCTGAGGCCATGGAGCCACGCAGACCCAGCACAGGATTAGAAACAGACCTTCCCGGGAGGCAGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 72 bp | TGGGAGGTCCCACTTTGTACCCTCTCCCGAGAGCTTTaGGGGGTACCTGCCGCCTCTAGCTGTGCCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: WEVPLCTLSREL*GVPAASSCAFS Trigger: AGAGAAGGCACAGCTAGAGGCGGCAGGTACCCCTCAAAGCTCTCGGGAGAGGGTACAAAGTGGGACCTCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | GAAACATGTGCATGTGGCCCCAGGCGACGTGAGGGGTaGAGTCTGCCTGCGTTATGCAATGCTCAGGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ETCACGPRRREG*SLPALCNAQAS Trigger: ACTGGCCTGAGCATTGCATAACGCAGGCAGACTGCACCCCTCACGTCGCCTGGGGCCACATGCACATGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 72 bp | ACTGATGGAGCGACCGTCTACACAGGGATCCTACGGTaGGGAGTGAGCCTTGCTGGCCTGATGCATGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: TDGATVYTGILR*GVSLAGLMHGS Trigger: ACTGCCATGCATCAGGCCAGCAAGGCTCACTCCCCACCGTAGGATCCCTGTGTAGACGGTCGCTCCATCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CAA 72 bp | GAGTGGGAACAGCCAGGCGTCCAATCTCCCTTCCTGTaGCGGCCGGGAACTGTTTTCCAGGTTTCTCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EWEQPGVQSPFL*RPGTVFQVSLG Trigger: CCCCAGAGAAACCTGGAAAACAGTTCCCGGCCGCAACAGGAAGGGAGATTGGACGCCTGGCTGTTCCCACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | CTGAATTCACCAGCGTTTCCAGCTCCTGAGGCCATGTaGGGTGTCACCTCACTCCTGGCAGACAGACTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LNSPAFPAPEAM*GVTSLLADRLP Trigger: TGGGAGTCTGTCTGCCAGGAGTGAGGTGACACCGCACATGGCCTCAGGAGCTGGAAACGCTGGTGAATTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | CATCGATGCTTGGAAGGTAGGGTCAGCCCAGTCCCTTaGTCCACACACCCAACTACACTGATGGAGCGACCG | + |
|
Preference number: 6 (lower is better) Translates to: HRCLEGRVSPVP*STHPTTLMERP Trigger: CGGTCGCTCCATCAGTGTAGTTGGGTGTGTGGAGCAAGGGACTGGGCTGACCCTACCTTCCAAGCATCGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | AGTGGGAACAGCCAGGCGTCCAATCTCCCTTCCTGTTaGGGCCGGGAACTGTTTTCCAGGTTTCTCTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SGNSQASNLPSC*GRELFSRFLWG Trigger: ACCCCAGAGAAACCTGGAAAACAGTTCCCGGCCGCAACAGGAAGGGAGATTGGACGCCTGGCTGTTCCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 72 bp | ATCTCCTCCTGCTCTGCTGAAGGCCACATCGATGCTTaGAAGGTAGGGTCAGCCCAGTCCCTTGCTCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: ISSCSAEGHIDA*KVGSAQSLAPH Trigger: GTGTGGAGCAAGGGACTGGGCTGACCCTACCTTCCAAGCATCGATGTGGCCTTCAGCAGAGCAGGAGGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 72 bp | TCTCTTGGAAACATGTGCATGTGGCCCCAGGCGACGTaGGGGGTGCAGTCTGCCTGCGTTATGCAATGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLGNMCMWPQAT*GVQSACVMQCS Trigger: TGAGCATTGCATAACGCAGGCAGACTGCACCCCTCACGTCGCCTGGGGCCACATGCACATGTTTCCAAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 72 bp | TTGGCTGCATCTGAATTCACCAGCGTTTCCAGCTCCTaGGGCCATGTGCGGTGTCACCTCACTCCTGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LAASEFTSVSSS*GHVRCHLTPGR Trigger: TCTGCCAGGAGTGAGGTGACACCGCACATGGCCTCAGGAGCTGGAAACGCTGGTGAATTCAGATGCAGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | GTTCCAAAAACTCCCAGGGTGGTGAATTCATCCAGATaGCGGGAGGGAGGACGGTGCACTGCAACCCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VPKTPRVVNSSR*REGGRCTATQV Trigger: AACCTGGGTTGCAGTGCACCGTCCTCCCTCCCGGCATCTGGATGAATTCACCACCCTGGGAGTTTTTGGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 72 bp | CAGCTCCTGAGGCCATGTGCGGTGTCACCTCACTCCTaGCAGACAGACTCCCACTCGGAGGATGATTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QLLRPCAVSPHS*QTDSHSEDDFS Trigger: TGAAAAATCATCCTCCGAGTGGGAGTCTGTCTGCCAGGAGTGAGGTGACACCGCACATGGCCTCAGGAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | GCCTTGTCATGCTATAAACCAGGAGGCCTGGCTCTCTaGCTCCCGGGAAGGTCTGTTTCTAATCCTGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALSCYKPGGLAL*LPGRSVSNPVL Trigger: CAGCACAGGATTAGAAACAGACCTTCCCGGGAGGCAGAGAGCCAGGCCTCCTGGTTTATAGCATGACAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | CAATGCTCAGGCCAGTTTTCCCTGAGAGAGGAATGCTaGCGATCCTCTGCGGTAACCCACAAAACTCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: QCSGQFSLREEC*RSSAVTHKTPR Trigger: CCGTGGAGTTTTGTGGGTTACCGCAGAGGATCGGCAGCATTCCTCTCTCAGGGAAAACTGGCCTGAGCATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | GCCAGGGTCGCTCTGTGGACCTTGGATGGACCAACGTaGTTTCCATGTCCAACTTTGTCAAGATCCGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ARVALWTLDGPT*FPCPTLSRSGE Trigger: TTCCCCGGATCTTGACAAAGTTGGACATGGAAAGCACGTTGGTCCATCCAAGGTCCACAGAGCGACCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | CCAGTTTTCCCTGAGAGAGGAATGCTGCCGATCCTCTaGGGTAACCCACAAAACTCCACGGAGATGCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PVFPERGMLPIL*GNPQNSTEMLG Trigger: TCCAAGCATCTCCGTGGAGTTTTGTGGGTTACCGCAGAGGATCGGCAGCATTCCTCTCTCAGGGAAAACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 72 bp | GGTTGTGGGTTTACCGGAATGAGGGCAAGGAACGCCTaGCCCATTCAGGGCGGAAAACCGCTTAAAGACATT | + |
|
Preference number: 6 (lower is better) Translates to: GCGFTGMRARNA*PIQGGKPLKDI Trigger: AATGTCTTTAAGCGGTTTTCCGCCCTGAATGGGCCAGGCGTTCCTTGCCCTCATTCCGGTAAACCCACAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 72 bp | CATGGCCTCCTGGGTGTCCTGCAAAGGCTTTGTCACTaGTGTCACTCCTCCAGGCCTCAGATAATTCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: HGLLGVLQRLCH*CHSSRPQIIPD Trigger: ATCTGGAATTATCTGAGGCCTGGAGGAGTGACACCAGTGACAAAGCCTTTGCAGGACACCCAGGAGGCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CAA 72 bp | TTGTCAAGATCCGGGGAAGATTCTCCAGCAAGTCTCTaGGAAACATGTGCATGTGGCCCCAGGCGACGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSRSGEDSPASL*ETCACGPRRRE Trigger: CTCACGTCGCCTGGGGCCACATGCACATGTTTCCAAGAGACTTGCTGGAGAATCTTCCCCGGATCTTGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 72 bp | GTGGTCACAGTCACAGGTGCTGACATGGAGAAGGATTaGTGCGTCCTCCTGAGTGCTGCCTTGTCATGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: VVTVTGADMEKD*CVLLSAALSCY Trigger: ATAGCATGACAAGGCAGCACTCAGGAGGACGCATCAATCCTTCTCCATGTCAGCACCTGTGACTGTGACCAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 72 bp | TATGCATCTGTGAACAGAAGTGAGACACTGATACACTaGGGGGACTCAGGGGCCACCACTGGGATGAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: YASVNRSETLIH*GDSGATTGMRL Trigger: AAGCCTCATCCCAGTGGTGGCCCCTGAGTCCCCTCAGTGTATCAGTGTCTCACTTCTGTTCACAGATGCATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | GCATTCCGGACCTGTGAGGCCCGGGGTTCGTTTTTATaGCTCCTTAAAGGGATGAGCCAGAGAAGAAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: AFRTCEARGSFL*LLKGMSQRRKS Trigger: AGACTTTCTTCTCTGGCTCATCCCTTTAAGGAGGCATAAAAACGAACCCCGGGCCTCACAGGTCCGGAATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | CGATCCTCTGCGGTAACCCACAAAACTCCACGGAGATaGTTGGAAGGAAAAGCATCGCGTCCTCCAGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: RSSAVTHKTPRR*LEGKASRPPDV Trigger: AACATCTGGAGGACGCGATGCTTTTCCTTCCAAGCATCTCCGTGGAGTTTTGTGGGTTACCGCAGAGGATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | ATGCAATGCTCAGGCCAGTTTTCCCTGAGAGAGGAATaGTGCCGATCCTCTGCGGTAACCCACAAAACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: MQCSGQFSLREE*CRSSAVTHKTP Trigger: TGGAGTTTTGTGGGTTACCGCAGAGGATCGGCAGCATTCCTCTCTCAGGGAAAACTGGCCTGAGCATTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | GTGGTGAATTCATCCAGATGCCGGGAGGGAGGACGGTaGACTGCAACCCAGGTTGTTAGTCTCAGAATTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VVNSSRCREGGR*TATQVVSLRIE Trigger: TTCAATTCTGAGACTAACAACCTGGGTTGCAGTGCACCGTCCTCCCTCCCGGCATCTGGATGAATTCACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 72 bp | CTTAGGTCTGGCACTTCAACTGCAAAGTACAAGTCCTaGGCTATCTCCTCCTGCTCTGCTGAAGGCCACATC | + |
|
Preference number: 6 (lower is better) Translates to: LRSGTSTAKYKS*AISSCSAEGHI Trigger: GATGTGGCCTTCAGCAGAGCAGGAGGAGATAGCCCAGGACTTGTACTTTGCAGTTGAAGTGCCAGACCTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CAA 90 bp | ATTCATCCAGATGCCGGGAGGGAGGACGGTGCACTGCAACCCAGGTaGTTAGTCTCAGAATTGAATGGAATTCCAGGACATCCAGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: IHPDAGREDGALQPR*LVSELNGIPGHPVG Trigger: GCCAACTGGATGTCCTGGAATTCCATTCAATTCTGAGACTAACAACCTGGGTTGCAGTGCACCGTCCTCCCTCCCGGCATCTGGATGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 72 bp | ATCATACTCCAAAATGAGGGCCCCAGCAGCAGCCTCTaGAGCAAGTTTCTGTCTGAGCTTCTCCCATCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: IILQNEGPSSSL*SKFLSELLPSS Trigger: AGAGGATGGGAGAAGCTCAGACAGAAACTTGCTTCAGAGGCTGCTGCTGGGGCCCTCATTTTGGAGTATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | TCAACTGCAAAGTACAAGTCCTGGGCTATCTCCTCCTaGTCTGCTGAAGGCCACATCGATGCTTGGAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: STAKYKSWAISS*SAEGHIDAWKV Trigger: TACCTTCCAAGCATCGATGTGGCCTTCAGCAGAGCAGGAGGAGATAGCCCAGGACTTGTACTTTGCAGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | CCATCCTCTGTGTCTCAGTACCACTCTCACTCAAGGTaGCATAGAAATGGGAATCCTTCTTCCCCACAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PSSVSQYHSHSR*HRNGNPSSPQW Trigger: CCACTGTGGGGAAGAAGGATTCCCATTTCTATGGCACCTTGAGTGAGAGTGGTACTGAGACACAGAGGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CAA 72 bp | AAACTGGCCATAAAGAAATGGTCTGACCTACCTGGCTaGGCTGTAGCTCCTAAGACCCCCATTCCAGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KLAIKKWSDLPG*AVAPKTPIPER Trigger: CCTCTCTGGAATGGGGGTCTTAGGAGCTACAGCCAAGCCAGGTAGGTCAGACCATTTCTTTATGGCCAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CAA 90 bp | GCTCTGTGGACCTTGGATGGACCAACGTGCTTTCCATGTCCAACTTaGTCAAGATCCGGGGAAGATTCTCCAGCAAGTCTCTTGGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: ALWTLDGPTCFPCPT*SRSGEDSPASLLET Trigger: TGTTTCCAAGAGACTTGCTGGAGAATCTTCCCCGGATCTTGACAAAGTTGGACATGGAAAGCACGTTGGTCCATCCAAGGTCCACAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | CACAAGCGCTCTCCCAACAAGCCATATTCTCACCTCTaGAAAGCATTTCCAAGCATCTCCGTTTCCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: HKRSPNKPYSHL*KAFPSISVSSA Trigger: TGCAGAGGAAACGGAGATGCTTGGAAATGCTTTGCAGAGGTGAGAATATGGCTTGTTGGGAGAGCGCTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | ATGGTCTTGGGTCCTGTTTGTAACTGGGGCTCTTATTaGCACGGTCAGTTCTGTCAGCCTTCTGATCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: MVLGPVCNWGSY*HGQFCQPSDLC Trigger: ACAGAGATCAGAAGGCTGACAGAACTGACCGTGGCAATAAGAGCCCCAGTTACAAACAGGACCCAAGACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CAA 72 bp | ACCTTGGATGGACCAACGTGCTTTCCATGTCCAACTTaGTCAAGATCCGGGGAAGATTCTCCAGCAAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TLDGPTCFPCPT*SRSGEDSPASL Trigger: GAGACTTGCTGGAGAATCTTCCCCGGATCTTGACAAAGTTGGACATGGAAAGCACGTTGGTCCATCCAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 72 bp | CCGCTTAAAGACATTCTTAATCCACAAACAATAGCGTaGGCGATCTGTGCCTTAAGGGCATGCTCCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PLKDILNPQTIA*AICALRACSSC Trigger: GCAGGAGGAGCATGCCCTTAAGGCACAGATCGCTCACGCTATTGTTTGTGGATTAAGAATGTCTTTAAGCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CAA 90 bp | GCTCTTATTGCCACGGTCAGTTCTGTCAGCCTTCTGATCTCTGTTTaGACATTAATGCCTAAATTCCAAAGGGAGTGGGAACAGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ALIATVSSVSLLISV*TLMPKFQREWEQPG Trigger: GCCTGGCTGTTCCCACTCCCTTTGGAATTTAGGCATTAATGTCAAAACAGAGATCAGAAGGCTGACAGAACTGACCGTGGCAATAAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | GAGGGTTATGCCCATGAGCGAGCCTACCTATACATGTaGAGTGTCACATTACTGAGACGATTCTGTTTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: EGYAHERAYLYM*SVTLLRRFCLE Trigger: CTCTAAACAGAATCGTCTCAGTAATGTGACACTGCACATGTATAGGTAGGCTCGCTCATGGGCATAACCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 72 bp | TCTGTTTTGACATTAATGCCTAAATTCCAAAGGGAGTaGGAACAGCCAGGCGTCCAATCTCCCTTCCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SVLTLMPKFQRE*EQPGVQSPFLL Trigger: CAACAGGAAGGGAGATTGGACGCCTGGCTGTTCCCACTCCCTTTGGAATTTAGGCATTAATGTCAAAACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 72 bp | TGGTGTGGCTGCTGCAGAAAACACTTTGGTGGTTCCTaGAAAAGTTTAGGCATACACTTAGCATGGGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: WCGCCRKHFGGS*KSLGIHLAWDS Trigger: TGAGTCCCATGCTAAGTGTATGCCTAAACTTTTTCAGGAACCACCAAAGTGTTTTCTGCAGCAGCCACACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 72 bp | GATATATATTGGCTCAGCTCGAACACGCGGGATATCTaGAAGCAAGCCTTATCGGTTATAGGTGGATTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: DIYWLSSNTRDI*KQALSVIGGFR Trigger: TCTGAATCCACCTATAACCGATAAGGCTTGCTTCCAGATATCCCGCGTGTTCGAGCTGAGCCAATATATATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 72 bp | AAATGCGAGAATGTGGAGTGGGAATGTAAAATGGTGTaGCTGCTGCAGAAAACACTTTGGTGGTTCCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: KCENVEWECKMV*LLQKTLWWFLK Trigger: TTTCAGGAACCACCAAAGTGTTTTCTGCAGCAGCCACACCATTTTACATTCCCACTCCACATTCTCGCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CAA 90 bp | GAAGCAAGCCTTATCGGTTATAGGTGGATTCAGAGAGTCTTCAGTTaGCGGCTGGTTAAAGGAGCAAAGCTTTATCTAAAACCTAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: EASLIGYRWIQRVFS*RLVKGAKLYLKPRV Trigger: GACTCTAGGTTTTAGATAAAGCTTTGCTCCTTTAACCAGCCGCAAACTGAAGACTCTCTGAATCCACCTATAACCGATAAGGCTTGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CAA 90 bp | CAGCTAAGCCTCCAATCCTATTTCTACATGGCTGCCCATACTTCATaGAACCTAAGCATAAAAATGAGCTGTTTATCTGAAGGGTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: QLSLQSYFYMAAHTS*NLSIKMSCLSEGSL Trigger: AAGGGACCCTTCAGATAAACAGCTCATTTTTATGCTTAGGTTCAATGAAGTATGGGCAGCCATGTAGAAATAGGATTGGAGGCTTAGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 72 bp | TGCCGCCGAAGTATATGCTTCAAGATGGCTGTTAAGTaGATTTCACTCCATAAAAGGTGTGTTTTAGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: CRRSICFKMAVK*ISLHKRCVLEG Trigger: ACCCTCTAAAACACACCTTTTATGGAGTGAAATTCACTTAACAGCCATCTTGAAGCATATACTTCGGCGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 72 bp | CCGAAAGAAGTGAGACACAAACGTTCGCACACCGCGTaGTTCCTTTTATATGAAATATCCAAAACGGACAAA | + |
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Preference number: 6 (lower is better) Translates to: PKEVRHKRSHTA*FLLYEISKTDK Trigger: TTTGTCCGTTTTGGATATTTCATATAAAAGGAATCACGCGGTGTGCGAACGTTTGTGTCTCACTTCTTTCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS GCA 72 bp | GATCCAGCTAAGCCTCCAATCCTATTTCTACATGGCTaGCCATACTTCATTGAACCTAAGCATAAAAATGAG | + |
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Preference number: 6 (lower is better) Translates to: DPAKPPILFLHG*PYFIEPKHKNE Trigger: CTCATTTTTATGCTTAGGTTCAATGAAGTATGGGCAGCCATGTAGAAATAGGATTGGAGGCTTAGCTGGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CCA 72 bp | ACAATGCTTATCACTGGCTTGCTGTCAATAAATATGTaGGTAAATCTCTGTTCAAGGCTCTCAGCTCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: TMLITGLLSINM*VNLCSRLSALK Trigger: CTTCAGAGCTGAGAGCCTTGAACAGAGATTTACCCACATATTTATTGACAGCAAGCCAGTGATAAGCATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS TCA 72 bp | ACACAAACGTTCGCACACCGCGTGATTCCTTTTATATaGAATATCCAAAACGGACAAATCCATAGAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: TQTFAHRVIPFI*NIQNGQIHRDR Trigger: TCTGTCTCTATGGATTTGTCCGTTTTGGATATTTCATATAAAAGGAATCACGCGGTGTGCGAACGTTTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CAA 72 bp | CTTATCGGTTATAGGTGGATTCAGAGAGTCTTCAGTTaGCGGCTGGTTAAAGGAGCAAAGCTTTATCTAAAA | + |
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Preference number: 6 (lower is better) Translates to: LIGYRWIQRVFS*RLVKGAKLYLK Trigger: TTTTAGATAAAGCTTTGCTCCTTTAACCAGCCGCAAACTGAAGACTCTCTGAATCCACCTATAACCGATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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| CDS CAA 72 bp | CTCCAATCCTATTTCTACATGGCTGCCCATACTTCATaGAACCTAAGCATAAAAATGAGCTGTTTATCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LQSYFYMAAHTS*NLSIKMSCLSE Trigger: TTCAGATAAACAGCTCATTTTTATGCTTAGGTTCAATGAAGTATGGGCAGCCATGTAGAAATAGGATTGGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562710.2 |
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