Pregenerated sensors for LINC00558 (Homo sapiens)
Ensembl gene IDs: ENSG00000261517Ensembl transcript IDs: ENST00000569422.1, ENST00000655355.1, ENST00000663173.1, ENST00000666941.1
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CAGCTGAACTCTGCATGGCATAAGGGCAGGAGAACTTCGACCAGATaGGTTCCTTTCACAAGCACATGTCACGCTGTGTGGATCCGGCTT | + |
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Preference number: 5 (lower is better) Translates to: QLNSAWHKGRRTSTR*VPFTSTCHAVWIRL Trigger: AAGCCGGATCCACACAGCGTGACATGTGCTTGTGAAAGGAACTCATCTGGTCGAAGTTCTCCTGCCCTTATGCCATGCAGAGTTCAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663173.1 |
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| CDS GCA 90 bp | CCTTTTTACGAGCTTCATAGGCGTTTGCTCCTAAAATGTCCTGACTaGCTTGTGACAGGCTCTGAGAGGTGGTGTGGTTTGTCCCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: PFYELHRRLLLKCPD*LVTGSERWCGLSQG Trigger: GCCCTGGGACAAACCACACCACCTCTCAGAGCCTGTCACAAGGCAGTCAGGACATTTTAGGAGCAAACGCCTATGAAGCTCGTAAAAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000569422.1 ENST00000655355.1 ENST00000666941.1 |
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| CDS CCA 90 bp | TTGCTCCTAAAATGTCCTGACTGCCTTGTGACAGGCTCTGAGAGGTaGTGTGGTTTGTCCCAGGGCATGTACCTTATCAGTTGTGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: LLLKCPDCLVTGSER*CGLSQGMYLISCGA Trigger: GGCTCCACAACTGATAAGGTACATGCCCTGGGACAAACCACACCACCTCTCAGAGCCTGTCACAAGGCAGTCAGGACATTTTAGGAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000569422.1 ENST00000655355.1 ENST00000666941.1 |
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| CDS CCA 90 bp | CTACTTTTCAGGTGTAGACTCCTATCCATAAAGATGGGTCAATTCTaGTCACAGCCTTGCCTGAATAATGGCCGAAGACCTCAGTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: LLFRCRLLSIKMGQF*SQPCLNNGRRPQSC Trigger: ACAGGACTGAGGTCTTCGGCCATTATTCAGGCAAGGCTGTGACCAGAATTGACCCATCTTTATGGATAGGAGTCTACACCTGAAAAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655355.1 |
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| CDS GCA 90 bp | GCACTATTTACATTGGCTCAGGTAAATCTTTGTTGTGGGGATGGGTaGTGTCCTGTGCATTGTAGGATGTTTAGCAGAATCCCTAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: ALFTLAQVNLCCGDG*CPVHCRMFSRIPSL Trigger: AAGGCTAGGGATTCTGCTAAACATCCTACAATGCACAGGACAGCACCCATCCCCACAACAAAGATTTACCTGAGCCAATGTAAATAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569422.1 |
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| CDS TCA 90 bp | GTCCTGTGTAGGTGCACTTCATCAGTCTCAGGGTTATGCAATGCTTaGTATAATTACTGGGTACTGAAAGAAGATCAGATGTTGCAAAAC | + |
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Preference number: 5 (lower is better) Translates to: VLCRCTSSVSGLCNA*YNYWVLKEDQMLQN Trigger: GTTTTGCAACATCTGATCTTCTTTCAGTACCCAGTAATTATATCAAGCATTGCATAACCCTGAGACTGATGAAGTGCACCTACACAGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655355.1 |
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| CDS TCA 90 bp | TCTGGAAGTATAGTTATTGTTGGTGCTACCATGAAGGAGATAACTTaGGAATCTAGATCACAGAGTAACCAACACAACTGCAAAGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: SGSIVIVGATMKEIT*ESRSQSNQHNCKEV Trigger: CACTTCTTTGCAGTTGTGTTGGTTACTCTGTGATCTAGATTCTCAAGTTATCTCCTTCATGGTAGCACCAACAATAACTATACTTCCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569422.1 |
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| CDS CCA 90 bp | ATACCTTGGACAATAACTTTTCTTCAGAGTTTACAAATTAGAACTTaGTCTGGCTCACATCTCGAATTCACTCTCCTAAAACCCAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: IPWTITFLQSLQIRT*SGSHLEFTLLKPRA Trigger: TGCTCTGGGTTTTAGGAGAGTGAATTCGAGATGTGAGCCAGACCAAGTTCTAATTTGTAAACTCTGAAGAAAAGTTATTGTCCAAGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000569422.1 ENST00000655355.1 ENST00000663173.1 |
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| CDS CCA 90 bp | ATACATGGTACAATTCTAGCTAACTTGAATGAAGCAGCTGTTTGCTaGCAGATTCTGAGAAAGGTAACAATCTGGAAGTATAGTTATTGT | + |
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Preference number: 5 (lower is better) Translates to: IHGTILANLNEAAVC*QILRKVTIWKYSYC Trigger: ACAATAACTATACTTCCAGATTGTTACCTTTCTCAGAATCTGCCAGCAAACAGCTGCTTCATTCAAGTTAGCTAGAATTGTACCATGTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569422.1 |
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| CDS TCA 90 bp | ACAGTTCATAATAACTTTATGTTATCATGGACAGTTAATGGCCTTTaGAAAGAAACACTACTCAAGCTTCAAATTCCAGCTGAACTCTGC | + |
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Preference number: 5 (lower is better) Translates to: TVHNNFMLSWTVNGL*KETLLKLQIPAELC Trigger: GCAGAGTTCAGCTGGAATTTGAAGCTTGAGTAGTGTTTCTTTTCAAAGGCCATTAACTGTCCATGATAACATAAAGTTATTATGAACTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663173.1 |
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| CDS GCA 90 bp | CTTTATCTTCTGAAAATAGGTAATTCAATTAGATTTGTGGGATTATaGATTCCAGGGAATCACAGGCAACCACCTTATGACAATGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LYLLKIGNSIRFVGL*IPGNHRQPPYDNVE Trigger: TTCAACATTGTCATAAGGTGGTTGCCTGTGATTCCCTGGAATGCATAATCCCACAAATCTAATTGAATTACCTATTTTCAGAAGATAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569422.1 |
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| CDS TCA 72 bp | GTCCTCGCTCCCAAGATAACAAGCCACTTCAGCCTCTaGTTGACTGCGGGCGGGGTCTCCACTTCAGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: VLAPKITSHFSL*LTAGGVSTSAS Trigger: AGAGGCTGAAGTGGAGACCCCGCCCGCAGTCAATCAGAGGCTGAAGTGGCTTGTTATCTTGGGAGCGAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000569422.1 ENST00000666941.1 |
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| CDS CCA 72 bp | TTGACTGCGGGCGGGGTCTCCACTTCAGCCTCTGATTaGTCACAGGTCAGTCCTTCATGGGTGTGGCCAATT | + |
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Preference number: 6 (lower is better) Translates to: LTAGGVSTSASD*SQVSPSWVWPI Trigger: AATTGGCCACACCCATGAAGGACTGACCTGTGACCAATCAGAGGCTGAAGTGGAGACCCCGCCCGCAGTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000569422.1 ENST00000666941.1 |
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| CDS CAA 72 bp | GACTGCCTTGTGACAGGCTCTGAGAGGTGGTGTGGTTaGTCCCAGGGCATGTACCTTATCAGTTGTGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: DCLVTGSERWCG*SQGMYLISCGA Trigger: GGCTCCACAACTGATAAGGTACATGCCCTGGGACAAACCACACCACCTCTCAGAGCCTGTCACAAGGCAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000569422.1 ENST00000655355.1 ENST00000666941.1 |
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| CDS CAA 90 bp | AAATGTCCTGACTGCCTTGTGACAGGCTCTGAGAGGTGGTGTGGTTaGTCCCAGGGCATGTACCTTATCAGTTGTGGAGCCAGCATTCAA | + |
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Preference number: 6 (lower is better) Translates to: KCPDCLVTGSERWCG*SQGMYLISCGASIQ Trigger: TTGAATGCTGGCTCCACAACTGATAAGGTACATGCCCTGGGACAAACCACACCACCTCTCAGAGCCTGTCACAAGGCAGTCAGGACATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000569422.1 ENST00000655355.1 ENST00000666941.1 |
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| CDS TCA 72 bp | CTCTGGAGAGGGCACACAGGAGCACAGGATGACATATaGGTCAGTGAATGCCACCTTAGACTTTCTGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: LWRGHTGAQDDI*VSECHLRLSGS Trigger: GCTTCCAGAAAGTCTAAGGTGGCATTCACTGACTCATATGTCATCCTGTGCTCCTGTGTGCCCTCTCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655355.1 |
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| CDS TCA 72 bp | TCTGCATGGCATAAGGGCAGGAGAACTTCGACCAGATaGGTTCCTTTCACAAGCACATGTCACGCTGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: SAWHKGRRTSTR*VPFTSTCHAVW Trigger: CCACACAGCGTGACATGTGCTTGTGAAAGGAACTCATCTGGTCGAAGTTCTCCTGCCCTTATGCCATGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663173.1 |
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| CDS GCA 72 bp | GAGCTTCATAGGCGTTTGCTCCTAAAATGTCCTGACTaGCTTGTGACAGGCTCTGAGAGGTGGTGTGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: ELHRRLLLKCPD*LVTGSERWCGL Trigger: CAAACCACACCACCTCTCAGAGCCTGTCACAAGGCAGTCAGGACATTTTAGGAGCAAACGCCTATGAAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000569422.1 ENST00000655355.1 ENST00000666941.1 |
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| CDS CCA 72 bp | AAATGTCCTGACTGCCTTGTGACAGGCTCTGAGAGGTaGTGTGGTTTGTCCCAGGGCATGTACCTTATCAGT | + |
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Preference number: 6 (lower is better) Translates to: KCPDCLVTGSER*CGLSQGMYLIS Trigger: ACTGATAAGGTACATGCCCTGGGACAAACCACACCACCTCTCAGAGCCTGTCACAAGGCAGTCAGGACATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000569422.1 ENST00000655355.1 ENST00000666941.1 |
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| CDS CCA 72 bp | TCTCTCAAGGGGAAACTAGGTAGGAGAATAGGGAACTaGGGTGAGCAGGGGTTAAAGCATGAGCAGGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: SLKGKLGRRIGN*GEQGLKHEQEN Trigger: GTTCTCCTGCTCATGCTTTAACCCCTGCTCACCCCAGTTCCCTATTCTCCTACCTAGTTTCCCCTTGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000569422.1 ENST00000666941.1 |
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| CDS CCA 72 bp | TCTTTGAGTAAGAGAAGGTGTAAGTGTCAGGACTCTTaGAGCCTCTGGAGAGGGCACACAGGAGCACAGGAT | + |
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Preference number: 6 (lower is better) Translates to: SLSKRRCKCQDS*SLWRGHTGAQD Trigger: ATCCTGTGCTCCTGTGTGCCCTCTCCAGAGGCTCCAAGAGTCCTGACACTTACACCTTCTCTTACTCAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655355.1 |
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| CDS CAA 90 bp | CTCACTTCCCATAAGCCAAGCCCTTTTTACGAGCTTCATAGGCGTTaGCTCCTAAAATGTCCTGACTGCCTTGTGACAGGCTCTGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LTSHKPSPFYELHRR*LLKCPDCLVTGSER Trigger: CCTCTCAGAGCCTGTCACAAGGCAGTCAGGACATTTTAGGAGCAAACGCCTATGAAGCTCGTAAAAAGGGCTTGGCTTATGGGAAGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000569422.1 ENST00000666941.1 |
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| CDS CAA 72 bp | CATAAGCCAAGCCCTTTTTACGAGCTTCATAGGCGTTaGCTCCTAAAATGTCCTGACTGCCTTGTGACAGGC | + |
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Preference number: 6 (lower is better) Translates to: HKPSPFYELHRR*LLKCPDCLVTG Trigger: GCCTGTCACAAGGCAGTCAGGACATTTTAGGAGCAAACGCCTATGAAGCTCGTAAAAAGGGCTTGGCTTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000569422.1 ENST00000655355.1 ENST00000666941.1 |
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| CDS CAA 90 bp | CTTCAAATTCATAAGCCAAGCCCTTTTTACGAGCTTCATAGGCGTTaGCTCCTAAAATGTCCTGACTGCCTTGTGACAGGCTCTGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LQIHKPSPFYELHRR*LLKCPDCLVTGSER Trigger: CCTCTCAGAGCCTGTCACAAGGCAGTCAGGACATTTTAGGAGCAAACGCCTATGAAGCTCGTAAAAAGGGCTTGGCTTATGAATTTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655355.1 |
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| CDS GCA 72 bp | CTATCCATAAAGATGGGTCAATTCTGGTCACAGCCTTaGCTGAATAATGGCCGAAGACCTCAGTCCTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: LSIKMGQFWSQP*LNNGRRPQSCV Trigger: TACACAGGACTGAGGTCTTCGGCCATTATTCAGGCAAGGCTGTGACCAGAATTGACCCATCTTTATGGATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655355.1 |
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| CDS GCA 72 bp | ACATTGGCTCAGGTAAATCTTTGTTGTGGGGATGGGTaGTGTCCTGTGCATTGTAGGATGTTTAGCAGAATC | + |
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Preference number: 6 (lower is better) Translates to: TLAQVNLCCGDG*CPVHCRMFSRI Trigger: GATTCTGCTAAACATCCTACAATGCACAGGACAGCACCCATCCCCACAACAAAGATTTACCTGAGCCAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569422.1 |
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| CDS CCA 72 bp | CTAAAACCCAGAGCAAAGAACCCAGAAACTCCTTGCTaGATGTCTGACCTACAGAAACTTTGTGTGGAGACT | + |
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Preference number: 6 (lower is better) Translates to: LKPRAKNPETPC*MSDLQKLCVET Trigger: AGTCTCCACACAAAGTTTCTGTAGGTCAGACATCCAGCAAGGAGTTTCTGGGTTCTTTGCTCTGGGTTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000569422.1 ENST00000655355.1 ENST00000663173.1 |
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| CDS CCA 72 bp | GCTCGAACTCACTCCTGCTCTGTGAATTGTGTTCGGTaGATCTGTGCTTTATTACTCTGTTCTTCTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: ARTHSCSVNCVR*ICALLLCSSVA Trigger: AGCAACAGAAGAACAGAGTAATAAAGCACAGATCCACCGAACACAATTCACAGAGCAGGAGTGAGTTCGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000569422.1 ENST00000666941.1 |
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| CDS CAA 72 bp | GGTACACAACTGGGTAGCTTATTCCTGCTCTGTGAATaGTGTTCGGTGGATCTGTGCTTTATTACTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: GTQLGSLFLLCE*CSVDLCFITLF Trigger: GAACAGAGTAATAAAGCACAGATCCACCGAACACAATTCACAGAGCAGGAATAAGCTACCCAGTTGTGTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655355.1 |
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| CDS CCA 72 bp | TGGGTAGCTTATTCCTGCTCTGTGAATTGTGTTCGGTaGATCTGTGCTTTATTACTCTGTTCTTCTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: WVAYSCSVNCVR*ICALLLCSSVA Trigger: AGCAACAGAAGAACAGAGTAATAAAGCACAGATCCACCGAACACAATTCACAGAGCAGGAATAAGCTACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655355.1 |
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| CDS CAA 72 bp | GCATGTACCTTATCAGTTGTGGAGCCAGCATTCAAATaGCAGTACCTGATTCTAGAGTTCATCTTCACCACA | + |
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Preference number: 6 (lower is better) Translates to: ACTLSVVEPAFK*QYLILEFIFTT Trigger: TGTGGTGAAGATGAACTCTAGAATCAGGTACTGCAATTTGAATGCTGGCTCCACAACTGATAAGGTACATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000569422.1 ENST00000655355.1 ENST00000666941.1 |
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| CDS CAA 72 bp | ATAGAAGAGGATTTCTTAATGCCAGCACTATTTACATaGGCTCAGGTAAATCTTTGTTGTGGGGATGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: IEEDFLMPALFT*AQVNLCCGDGC Trigger: GCACCCATCCCCACAACAAAGATTTACCTGAGCCAATGTAAATAGTGCTGGCATTAAGAAATCCTCTTCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569422.1 |
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| CDS TCA 72 bp | AGGTGCACTTCATCAGTCTCAGGGTTATGCAATGCTTaGTATAATTACTGGGTACTGAAAGAAGATCAGATG | + |
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Preference number: 6 (lower is better) Translates to: RCTSSVSGLCNA*YNYWVLKEDQM Trigger: CATCTGATCTTCTTTCAGTACCCAGTAATTATATCAAGCATTGCATAACCCTGAGACTGATGAAGTGCACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655355.1 |
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| CDS TCA 72 bp | GAAGAATGTCAGCATAATCAAATCAGCAACCTTCTTTaGGTAAGAGAAGGTGTAAGTGTCAGGACTCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: EECQHNQISNLL*VREGVSVRTLG Trigger: TCCAAGAGTCCTGACACTTACACCTTCTCTTACTCAAAGAAGGTTGCTGATTTGATTATGCTGACATTCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655355.1 |
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| CDS TCA 72 bp | ATAGTTATTGTTGGTGCTACCATGAAGGAGATAACTTaGGAATCTAGATCACAGAGTAACCAACACAACTGC | + |
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Preference number: 6 (lower is better) Translates to: IVIVGATMKEIT*ESRSQSNQHNC Trigger: GCAGTTGTGTTGGTTACTCTGTGATCTAGATTCTCAAGTTATCTCCTTCATGGTAGCACCAACAATAACTAT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569422.1 |
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| CDS CCA 72 bp | GAGTTCATCTTCACCACAAAATACTATATTCAAGTTTaGCATCCTGTGAATACTGTTGGATGTGGAACCCAT | + |
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Preference number: 6 (lower is better) Translates to: EFIFTTKYYIQV*HPVNTVGCGTH Trigger: ATGGGTTCCACATCCAACAGTATTCACAGGATGCCAAACTTGAATATAGTATTTTGTGGTGAAGATGAACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666941.1 |
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| CDS CAA 72 bp | AGAGTTCATCTTCACCACAAAATACTATATTCAAGTTaGGCATCCTGTGAATACTGTTGGATGTGGAACCCA | + |
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Preference number: 6 (lower is better) Translates to: RVHLHHKILYSS*ASCEYCWMWNP Trigger: TGGGTTCCACATCCAACAGTATTCACAGGATGCCAAACTTGAATATAGTATTTTGTGGTGAAGATGAACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666941.1 |
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| CDS TCA 72 bp | CAGGGTTATGCAATGCTTGATATAATTACTGGGTACTaGAAGAAGATCAGATGTTGCAAAACTCAACTCCAA | + |
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Preference number: 6 (lower is better) Translates to: QGYAMLDIITGY*KKIRCCKTQLQ Trigger: TTGGAGTTGAGTTTTGCAACATCTGATCTTCTTTCAGTACCCAGTAATTATATCAAGCATTGCATAACCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655355.1 |
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| CDS TCA 72 bp | AGTGCAGGAGGAATATATAAAACGTTGCAACTCTCTTaGATTTTGCAAATCTCTAGATCATGCCTGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: SAGGIYKTLQLS*ILQISRSCLKS Trigger: TGATTTCAGGCATGATCTAGAGATTTGCAAAATTCAAGAGAGTTGCAACGTTTTATATATTCCTCCTGCACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569422.1 |
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