Pregenerated sensors for LINC00552 (Homo sapiens)
Ensembl gene IDs: ENSG00000282664Ensembl transcript IDs: ENST00000625151.1, ENST00000633962.1, ENST00000672977.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCTGGGATGAGGACACTCTCACCTTCCTCCGCCCCTTCATCTCCTaGTGGTGCCTGACTCTGTGGGCGCCCACGGGGCAGGCTCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: AWDEDTLTFLRPFIS*WCLTLWAPTGQAPG Trigger: GCCCGGAGCCTGCCCCGTGGGCGCCCACAGAGTCAGGCACCAGCAGGAGATGAAGGGGCGGAGGAAGGTGAGAGTGTCCTCATCCCAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS GCA 90 bp | CTACAGCTCCTCCAGGGATCGGCGCAGGCACCTGCAGCACAGGTGTaGAGCCAGGGCCACACCGTGAAGCCTGGGCAGGCAGTGGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: LQLLQGSAQAPAAQV*SQGHTVKPGQAVGP Trigger: AGGGCCCACTGCCTGCCCAGGCTTCACGGTGTGGCCCTGGCTGCACACCTGTGCTGCAGGTGCCTGCGCCGATCCCTGGAGGAGCTGTAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CCA 90 bp | GCACCATGGGTGTTCGCCGTGGGGCTGGGAGGCAGAGCCTACACCTaGGCACAGTCCTGCAGACCTAGCACCCATGAGCCACGGCCGCCT | + |
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Preference number: 5 (lower is better) Translates to: APWVFAVGLGGRAYT*AQSCRPSTHEPRPP Trigger: AGGCGGCCGTGGCTCATGGGTGCTAGGTCTGCAGGACTGTGCCCAGGTGTAGGCTCTGCCTCCCAGCCCCACGGCGAACACCCATGGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CCA 90 bp | TGGGATGAGGACACTCTCACCTTCCTCCGCCCCTTCATCTCCTGCTaGTGCCTGACTCTGTGGGCGCCCACGGGGCAGGCTCCGGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: WDEDTLTFLRPFISC*CLTLWAPTGQAPGH Trigger: GTGGCCCGGAGCCTGCCCCGTGGGCGCCCACAGAGTCAGGCACCAGCAGGAGATGAAGGGGCGGAGGAAGGTGAGAGTGTCCTCATCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CCA 90 bp | CCTGGGAGGGGCTCAGCCAGGCCGCAGGGACCTCACGAGGAGGCCTaGGATGAGGACACTCTCACCTTCCTCCGCCCCTTCATCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: PGRGSARPQGPHEEA*DEDTLTFLRPFISC Trigger: GCAGGAGATGAAGGGGCGGAGGAAGGTGAGAGTGTCCTCATCCCAGGCCTCCTCGTGAGGTCCCTGCGGCCTGGCTGAGCCCCTCCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS GCA 90 bp | CACAGTCCTGCAGACCTAGCACCCATGAGCCACGGCCGCCTCGCCTaGCCTCATGCTGGCCTCAGGTGCCCCTCACAGGTTGACACACCC | + |
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Preference number: 5 (lower is better) Translates to: HSPADLAPMSHGRLA*PHAGLRCPSQVDTP Trigger: GGGTGTGTCAACCTGTGAGGGGCACCTGAGGCCAGCATGAGGGCAGGCGAGGCGGCCGTGGCTCATGGGTGCTAGGTCTGCAGGACTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CCA 90 bp | GGTCTTGCTACAGGGCAGGGGCACCATGGGTGTTCGCCGTGGGGCTaGGAGGCAGAGCCTACACCTGGGCACAGTCCTGCAGACCTAGCA | + |
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Preference number: 5 (lower is better) Translates to: GLATGQGHHGCSPWG*EAEPTPGHSPADLA Trigger: TGCTAGGTCTGCAGGACTGTGCCCAGGTGTAGGCTCTGCCTCCCAGCCCCACGGCGAACACCCATGGTGCCCCTGCCCTGTAGCAAGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS GCA 90 bp | TGTGGGGGCAGGTGGCGGGAACCACACAGGCCTCAGTGGAGCCGGTaGCTTCATCTCAGAGGTCCTCATGGCAGCACTGTTGCCCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: CGGRWREPHRPQWSR*LHLRGPHGSTVAPG Trigger: TCCTGGGGCAACAGTGCTGCCATGAGGACCTCTGAGATGAAGGCACCGGCTCCACTGAGGCCTGTGTGGTTCCCGCCACCTGCCCCCACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS GCA 90 bp | GCACAAATGCTTACTACAGCTCCTCCAGGGATCGGCGCAGGCACCTaGAGCACAGGTGTGCAGCCAGGGCCACACCGTGAAGCCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: AQMLTTAPPGIGAGT*STGVQPGPHREAWA Trigger: TGCCCAGGCTTCACGGTGTGGCCCTGGCTGCACACCTGTGCTGCAGGTGCCTGCGCCGATCCCTGGAGGAGCTGTAGTAAGCATTTGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CCA 90 bp | GAGGAAGGGTGTGGGGGCAGGTGGCGGGAACCACACAGGCCTCAGTaGAGCCGGTGCCTTCATCTCAGAGGTCCTCATGGCAGCACTGTT | + |
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Preference number: 5 (lower is better) Translates to: EEGCGGRWREPHRPQ*SRCLHLRGPHGSTV Trigger: AACAGTGCTGCCATGAGGACCTCTGAGATGAAGGCACCGGCTCCACTGAGGCCTGTGTGGTTCCCGCCACCTGCCCCCACACCCTTCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS TCA 90 bp | ATGGTGGGACACCTGCTGGTGCCTGGGCCCAGATCAAGGTGGCTTTaGGCTCGTGAGGCTTCTCGCCACCATCGCCAGCAGCATTCGGCA | + |
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Preference number: 5 (lower is better) Translates to: MVGHLLVPGPRSRWL*AREASRHHRQQHSA Trigger: TGCCGAATGCTGCTGGCGATGGTGGCGAGAAGCCTCACGAGCTCAAAGCCACCTTGATCTGGGCCCAGGCACCAGCAGGTGTCCCACCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CCA 90 bp | CTGGGCTATGTTGCTGCTGGTGGGACTGAGCCCTTGCTCAGACTGTaGGAAGAGCCACTTCAGGCCTCACCCAAGACAGCCCAGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LGYVAAGGTEPLLRL*EEPLQASPKTAQRL Trigger: CAGCCTCTGGGCTGTCTTGGGTGAGGCCTGAAGTGGCTCTTCCCACAGTCTGAGCAAGGGCTCAGTCCCACCAGCAGCAACATAGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS GCA 90 bp | GCTTCCATGCCCTGGGCTATGTTGCTGCTGGTGGGACTGAGCCCTTaGTCAGACTGTGGGAAGAGCCACTTCAGGCCTCACCCAAGACAG | + |
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Preference number: 5 (lower is better) Translates to: ASMPWAMLLLVGLSP*SDCGKSHFRPHPRQ Trigger: CTGTCTTGGGTGAGGCCTGAAGTGGCTCTTCCCACAGTCTGAGCAAGGGCTCAGTCCCACCAGCAGCAACATAGCCCAGGGCATGGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CCA 90 bp | TGTGGGAGTCGAGCCCCATGTACGTCATCAAGGGCTTCCATGCCCTaGGCTATGTTGCTGCTGGTGGGACTGAGCCCTTGCTCAGACTGT | + |
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Preference number: 5 (lower is better) Translates to: CGSRAPCTSSRASMP*AMLLLVGLSPCSDC Trigger: ACAGTCTGAGCAAGGGCTCAGTCCCACCAGCAGCAACATAGCCCAGGGCATGGAAGCCCTTGATGACGTACATGGGGCTCGACTCCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS TCA 90 bp | AAGACCAGCACAGTCATCTCGGGCCCCTTGCCTTTTTCTCTGTGTTaGCATTCGCGGCAATGGCAGAGGGCTGATGGTGGGACACCTGCT | + |
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Preference number: 5 (lower is better) Translates to: KTSTVISGPLPFSLC*HSRQWQRADGGTPA Trigger: AGCAGGTGTCCCACCATCAGCCCTCTGCCATTGCCGCGAATGTCAACACAGAGAAAAAGGCAAGGGGCCCGAGATGACTGTGCTGGTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS GCA 90 bp | TTTGAAACAGGACCCAGCAGGGCCGTGTCCGGCACCTTGTTTATCTaGCCAGACTCTTCGGGCTGTGCATTTGTTGAAGCGTTGGCATCA | + |
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Preference number: 5 (lower is better) Translates to: FETGPSRAVSGTLFI*PDSSGCAFVEALAS Trigger: TGATGCCAACGCTTCAACAAATGCACAGCCCGAAGAGTCTGGGCAGATAAACAAGGTGCCGGACACGGCCCTGCTGGGTCCTGTTTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CCA 90 bp | GTGATGGAGCTGGAGGTTTGCGCACAGTGCTTTGTGTGTGCCATGTaGGCGTCTGGCAGCCAAGCTGAACCAAGCTCCTTTATTCTTGCA | + |
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Preference number: 5 (lower is better) Translates to: VMELEVCAQCFVCAM*ASGSQAEPSSFILA Trigger: TGCAAGAATAAAGGAGCTTGGTTCAGCTTGGCTGCCAGACGCCCACATGGCACACACAAAGCACTGTGCGCAAACCTCCAGCTCCATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS TCA 90 bp | CGCACAGTGCTTTGTGTGTGCCATGTGGGCGTCTGGCAGCCAAGCTaGACCAAGCTCCTTTATTCTTGCAACACCAGTTTCCATGGAACA | + |
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Preference number: 5 (lower is better) Translates to: RTVLCVCHVGVWQPS*TKLLYSCNTSFHGT Trigger: TGTTCCATGGAAACTGGTGTTGCAAGAATAAAGGAGCTTGGTTCAGCTTGGCTGCCAGACGCCCACATGGCACACACAAAGCACTGTGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS TCA 90 bp | AAGTTTTCCCGGGGTCTCCACACATCTATTTATGTCTGGCCTGTTTaGAACAGGACCCAGCAGGGCCGTGTCCGGCACCTTGTTTATCTG | + |
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Preference number: 5 (lower is better) Translates to: KFSRGLHTSIYVWPV*NRTQQGRVRHLVYL Trigger: CAGATAAACAAGGTGCCGGACACGGCCCTGCTGGGTCCTGTTTCAAACAGGCCAGACATAAATAGATGTGTGGAGACCCCGGGAAAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS TCA 90 bp | CGGCACCTTGTTTATCTGCCCAGACTCTTCGGGCTGTGCATTTGTTaGAGCGTTGGCATCATTTGTTCCACAGAACAGCAGTTCTTCACG | + |
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Preference number: 5 (lower is better) Translates to: RHLVYLPRLFGLCIC*SVGIICSTEQQFFT Trigger: CGTGAAGAACTGCTGTTCTGTGGAACAAATGATGCCAACGCTTCAACAAATGCACAGCCCGAAGAGTCTGGGCAGATAAACAAGGTGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS GCA 90 bp | TGCTGTGCTTTTACTGTGCCATTTCCAAGCTTGGATGTGTTTACATaGACAAATGCTTACTACAGCTCCTCCAGGGATCGGCGCAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: CCAFTVPFPSLDVFT*TNAYYSSSRDRRRH Trigger: GTGCCTGCGCCGATCCCTGGAGGAGCTGTAGTAAGCATTTGTGCATGTAAACACATCCAAGCTTGGAAATGGCACAGTAAAAGCACAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CCA 90 bp | TGTTTATCTGCCCAGACTCTTCGGGCTGTGCATTTGTTGAAGCGTTaGCATCATTTGTTCCACAGAACAGCAGTTCTTCACGTGTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: CLSAQTLRAVHLLKR*HHLFHRTAVLHVWS Trigger: GGACCACACGTGAAGAACTGCTGTTCTGTGGAACAAATGATGCCAACGCTTCAACAAATGCACAGCCCGAAGAGTCTGGGCAGATAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS GCA 90 bp | TATTCTTGCAACACCAGTTTCCATGGAACAAACAGCGAACAGCCCTaGATACCCAGGCTTGGGTGTTTTCCTGAAAACAACCAAGTAAGC | + |
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Preference number: 5 (lower is better) Translates to: YSCNTSFHGTNSEQP*IPRLGCFPENNQVS Trigger: GCTTACTTGGTTGTTTTCAGGAAAACACCCAAGCCTGGGTATGCAGGGCTGTTCGCTGTTTGTTCCATGGAAACTGGTGTTGCAAGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS TCA 90 bp | ATGAATGCAGAAAGTTGTCTCCACACACAAGCATTTATGTGTTTGTaGATGTGTGTCTCTGTGTACGTGTGTGTGCATGCCTGTGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: MNAESCLHTQAFMCL*MCVSVYVCVHACVC Trigger: GCACACACAGGCATGCACACACACGTACACAGAGACACACATTCACAAACACATAAATGCTTGTGTGTGGAGACAACTTTCTGCATTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS TCA 72 bp | TCACCTTCCTCCGCCCCTTCATCTCCTGCTGGTGCCTaGCTCTGTGGGCGCCCACGGGGCAGGCTCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SPSSAPSSPAGA*LCGRPRGRLRA Trigger: GGCCCGGAGCCTGCCCCGTGGGCGCCCACAGAGTCAGGCACCAGCAGGAGATGAAGGGGCGGAGGAAGGTGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS TCA 72 bp | GCCTGGGCAGGCAGTGGGCCCTGCCCTCCAGCCGTGTaGGTCGCTGCGATGCTTGCACAGCGAGGGGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: AWAGSGPCPPAV*VAAMLAQRGEH Trigger: GTGCTCCCCTCGCTGTGCAAGCATCGCAGCGACTCACACGGCTGGAGGGCAGGGCCCACTGCCTGCCCAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS GCA 72 bp | CACGGCCGCCTCGCCTGCCCTCATGCTGGCCTCAGGTaGCCCTCACAGGTTGACACACCCGGCTTACTGTCC | + |
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Preference number: 6 (lower is better) Translates to: HGRLACPHAGLR*PSQVDTPGLLS Trigger: GGACAGTAAGCCGGGTGTGTCAACCTGTGAGGGGCACCTGAGGCCAGCATGAGGGCAGGCGAGGCGGCCGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS GCA 72 bp | GCAGACCTAGCACCCATGAGCCACGGCCGCCTCGCCTaGCCTCATGCTGGCCTCAGGTGCCCCTCACAGGTT | + |
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Preference number: 6 (lower is better) Translates to: ADLAPMSHGRLA*PHAGLRCPSQV Trigger: AACCTGTGAGGGGCACCTGAGGCCAGCATGAGGGCAGGCGAGGCGGCCGTGGCTCATGGGTGCTAGGTCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS GCA 72 bp | AGGCAGTGGGCCCTGCCCTCCAGCCGTGTGAGTCGCTaGGATGCTTGCACAGCGAGGGGAGCACAGCCATGG | + |
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Preference number: 6 (lower is better) Translates to: RQWALPSSRVSR*DACTARGAQPW Trigger: CCATGGCTGTGCTCCCCTCGCTGTGCAAGCATCGCAGCGACTCACACGGCTGGAGGGCAGGGCCCACTGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CCA 72 bp | GTGTTCGCCGTGGGGCTGGGAGGCAGAGCCTACACCTaGGCACAGTCCTGCAGACCTAGCACCCATGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: VFAVGLGGRAYT*AQSCRPSTHEP Trigger: TGGCTCATGGGTGCTAGGTCTGCAGGACTGTGCCCAGGTGTAGGCTCTGCCTCCCAGCCCCACGGCGAACAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS TCA 72 bp | CACCTGCTGGTGCCTGGGCCCAGATCAAGGTGGCTTTaGGCTCGTGAGGCTTCTCGCCACCATCGCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: HLLVPGPRSRWL*AREASRHHRQQ Trigger: CTGCTGGCGATGGTGGCGAGAAGCCTCACGAGCTCAAAGCCACCTTGATCTGGGCCCAGGCACCAGCAGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CAA 72 bp | CCTGCCCTCATGCTGGCCTCAGGTGCCCCTCACAGGTaGACACACCCGGCTTACTGTCCCCAGCACCACACT | + |
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Preference number: 6 (lower is better) Translates to: PALMLASGAPHR*THPAYCPQHHT Trigger: AGTGTGGTGCTGGGGACAGTAAGCCGGGTGTGTCAACCTGTGAGGGGCACCTGAGGCCAGCATGAGGGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CCA 72 bp | GGTCCTCATGGCAGCACTGTTGCCCCAGGAGGTGTCTaGGGACATGTGTGGGGGTCAGGGTCTTGCTACAGG | + |
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Preference number: 6 (lower is better) Translates to: GPHGSTVAPGGV*GHVWGSGSCYR Trigger: CCTGTAGCAAGACCCTGACCCCCACACATGTCCCCAGACACCTCCTGGGGCAACAGTGCTGCCATGAGGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS GCA 72 bp | AGGTGGCGGGAACCACACAGGCCTCAGTGGAGCCGGTaGCTTCATCTCAGAGGTCCTCATGGCAGCACTGTT | + |
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Preference number: 6 (lower is better) Translates to: RWREPHRPQWSR*LHLRGPHGSTV Trigger: AACAGTGCTGCCATGAGGACCTCTGAGATGAAGGCACCGGCTCCACTGAGGCCTGTGTGGTTCCCGCCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CCA 72 bp | CGAGCCCCATGTACGTCATCAAGGGCTTCCATGCCCTaGGCTATGTTGCTGCTGGTGGGACTGAGCCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: RAPCTSSRASMP*AMLLLVGLSPC Trigger: GCAAGGGCTCAGTCCCACCAGCAGCAACATAGCCCAGGGCATGGAAGCCCTTGATGACGTACATGGGGCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CCA 72 bp | GCGTGGGTACTCTCTGCAGCTGTGCTGACCCCACAATaGGGTTGGCTTTGTGGGAGTCGAGCCCCATGTACG | + |
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Preference number: 6 (lower is better) Translates to: AWVLSAAVLTPQ*GWLCGSRAPCT Trigger: CGTACATGGGGCTCGACTCCCACAAAGCCAACCCCATTGTGGGGTCAGCACAGCTGCAGAGAGTACCCACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CAA 90 bp | CGAGCCCCATGTACGTCATCAAGGGCTTCCATGCCCTGGGCTATGTaGCTGCTGGTGGGACTGAGCCCTTGCTCAGACTGTGGGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: RAPCTSSRASMPWAM*LLVGLSPCSDCGKS Trigger: GCTCTTCCCACAGTCTGAGCAAGGGCTCAGTCCCACCAGCAGCAACATAGCCCAGGGCATGGAAGCCCTTGATGACGTACATGGGGCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS TCA 72 bp | TTCTCTGTGTTGACATTCGCGGCAATGGCAGAGGGCTaGTGGTGGGACACCTGCTGGTGCCTGGGCCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: FSVLTFAAMAEG*WWDTCWCLGPD Trigger: ATCTGGGCCCAGGCACCAGCAGGTGTCCCACCATCAGCCCTCTGCCATTGCCGCGAATGTCAACACAGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS GCA 72 bp | GGACCCAGCAGGGCCGTGTCCGGCACCTTGTTTATCTaGCCAGACTCTTCGGGCTGTGCATTTGTTGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: GPSRAVSGTLFI*PDSSGCAFVEA Trigger: CGCTTCAACAAATGCACAGCCCGAAGAGTCTGGGCAGATAAACAAGGTGCCGGACACGGCCCTGCTGGGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CCA 72 bp | TCTGTGGGAAGAGACTTAGGGTGTTGGTTCCCACCCTaGGCCCTGTTCTATCCCATTCCTGAGGGCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SVGRDLGCWFPP*ALFYPIPEGPG Trigger: CCCTGGGCCCTCAGGAATGGGATAGAACAGGGCCCAGGGTGGGAACCAACACCCTAAGTCTCTTCCCACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CAA 72 bp | CCGGGGTCTCCACACATCTATTTATGTCTGGCCTGTTaGAAACAGGACCCAGCAGGGCCGTGTCCGGCACCT | + |
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Preference number: 6 (lower is better) Translates to: PGSPHIYLCLAC*KQDPAGPCPAP Trigger: AGGTGCCGGACACGGCCCTGCTGGGTCCTGTTTCAAACAGGCCAGACATAAATAGATGTGTGGAGACCCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CAA 90 bp | TCTGGCCTGTTTGAAACAGGACCCAGCAGGGCCGTGTCCGGCACCTaGTTTATCTGCCCAGACTCTTCGGGCTGTGCATTTGTTGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: SGLFETGPSRAVSGT*FICPDSSGCAFVEA Trigger: CGCTTCAACAAATGCACAGCCCGAAGAGTCTGGGCAGATAAACAAGGTGCCGGACACGGCCCTGCTGGGTCCTGTTTCAAACAGGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CCA 72 bp | CTGGAGGTTTGCGCACAGTGCTTTGTGTGTGCCATGTaGGCGTCTGGCAGCCAAGCTGAACCAAGCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LEVCAQCFVCAM*ASGSQAEPSSF Trigger: AAAGGAGCTTGGTTCAGCTTGGCTGCCAGACGCCCACATGGCACACACAAAGCACTGTGCGCAAACCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CAA 72 bp | TGTACGTCATCAAGGGCTTCCATGCCCTGGGCTATGTaGCTGCTGGTGGGACTGAGCCCTTGCTCAGACTGT | + |
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Preference number: 6 (lower is better) Translates to: CTSSRASMPWAM*LLVGLSPCSDC Trigger: ACAGTCTGAGCAAGGGCTCAGTCCCACCAGCAGCAACATAGCCCAGGGCATGGAAGCCCTTGATGACGTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CAA 72 bp | TTTGAAACAGGACCCAGCAGGGCCGTGTCCGGCACCTaGTTTATCTGCCCAGACTCTTCGGGCTGTGCATTT | + |
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Preference number: 6 (lower is better) Translates to: FETGPSRAVSGT*FICPDSSGCAF Trigger: AAATGCACAGCCCGAAGAGTCTGGGCAGATAAACAAGGTGCCGGACACGGCCCTGCTGGGTCCTGTTTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CAA 72 bp | CTGTCCTTAGGCTTCTGTGGGAAGAGACTTAGGGTGTaGGTTCCCACCCTGGGCCCTGTTCTATCCCATTCC | + |
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Preference number: 6 (lower is better) Translates to: LSLGFCGKRLRV*VPTLGPVLSHS Trigger: GGAATGGGATAGAACAGGGCCCAGGGTGGGAACCAACACCCTAAGTCTCTTCCCACAGAAGCCTAAGGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CAA 90 bp | GAAGTTTTCCCGGGGTCTCCACACATCTATTTATGTCTGGCCTGTTaGAAACAGGACCCAGCAGGGCCGTGTCCGGCACCTTGTTTATCT | + |
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Preference number: 6 (lower is better) Translates to: EVFPGSPHIYLCLAC*KQDPAGPCPAPCLS Trigger: AGATAAACAAGGTGCCGGACACGGCCCTGCTGGGTCCTGTTTCAAACAGGCCAGACATAAATAGATGTGTGGAGACCCCGGGAAAACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CAA 90 bp | GCCCAGACTCTTCGGGCTGTGCATTTGTTGAAGCGTTGGCATCATTaGTTCCACAGAACAGCAGTTCTTCACGTGTGGTCCTTTGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: AQTLRAVHLLKRWHH*FHRTAVLHVWSFGC Trigger: ACACCCAAAGGACCACACGTGAAGAACTGCTGTTCTGTGGAACAAATGATGCCAACGCTTCAACAAATGCACAGCCCGAAGAGTCTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS TCA 72 bp | CTTTGTGTGTGCCATGTGGGCGTCTGGCAGCCAAGCTaGACCAAGCTCCTTTATTCTTGCAACACCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LCVCHVGVWQPS*TKLLYSCNTSF Trigger: GAAACTGGTGTTGCAAGAATAAAGGAGCTTGGTTCAGCTTGGCTGCCAGACGCCCACATGGCACACACAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CAA 90 bp | CCGGCACCTTGTTTATCTGCCCAGACTCTTCGGGCTGTGCATTTGTaGAAGCGTTGGCATCATTTGTTCCACAGAACAGCAGTTCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: PAPCLSAQTLRAVHL*KRWHHLFHRTAVLH Trigger: GTGAAGAACTGCTGTTCTGTGGAACAAATGATGCCAACGCTTCAACAAATGCACAGCCCGAAGAGTCTGGGCAGATAAACAAGGTGCCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS GCA 72 bp | TGTATGCGCATGTTTGGGTGTGTCTGTACGTGTGAGTaGATGTCTGTGTGGTGTGTGTACATGTGTGCATGC | + |
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Preference number: 6 (lower is better) Translates to: CMRMFGCVCTCE*MSVWCVYMCAC Trigger: GCATGCACACATGTACACACACCACACAGACATGCACTCACACGTACAGACACACCCAAACATGCGCATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000633962.1 |
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| CDS CAA 90 bp | TGTCCGGCACCTTGTTTATCTGCCCAGACTCTTCGGGCTGTGCATTaGTTGAAGCGTTGGCATCATTTGTTCCACAGAACAGCAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: CPAPCLSAQTLRAVH*LKRWHHLFHRTAVL Trigger: AAGAACTGCTGTTCTGTGGAACAAATGATGCCAACGCTTCAACAAATGCACAGCCCGAAGAGTCTGGGCAGATAAACAAGGTGCCGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CCA 72 bp | AACCAAGCTCCTTTATTCTTGCAACACCAGTTTCCATaGAACAAACAGCGAACAGCCCTGCATACCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: NQAPLFLQHQFP*NKQRTALHTQA Trigger: AGCCTGGGTATGCAGGGCTGTTCGCTGTTTGTTCCATGGAAACTGGTGTTGCAAGAATAAAGGAGCTTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CAA 90 bp | TTGTTTATCTGCCCAGACTCTTCGGGCTGTGCATTTGTTGAAGCGTaGGCATCATTTGTTCCACAGAACAGCAGTTCTTCACGTGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: LFICPDSSGCAFVEA*ASFVPQNSSSSRVV Trigger: GACCACACGTGAAGAACTGCTGTTCTGTGGAACAAATGATGCCAACGCTTCAACAAATGCACAGCCCGAAGAGTCTGGGCAGATAAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CAA 72 bp | CCTTGTTTATCTGCCCAGACTCTTCGGGCTGTGCATTaGTTGAAGCGTTGGCATCATTTGTTCCACAGAACA | + |
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Preference number: 6 (lower is better) Translates to: PCLSAQTLRAVH*LKRWHHLFHRT Trigger: TGTTCTGTGGAACAAATGATGCCAACGCTTCAACAAATGCACAGCCCGAAGAGTCTGGGCAGATAAACAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS GCA 72 bp | TTTACTGTGCCATTTCCAAGCTTGGATGTGTTTACATaGACAAATGCTTACTACAGCTCCTCCAGGGATCGG | + |
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Preference number: 6 (lower is better) Translates to: FTVPFPSLDVFT*TNAYYSSSRDR Trigger: CCGATCCCTGGAGGAGCTGTAGTAAGCATTTGTGCATGTAAACACATCCAAGCTTGGAAATGGCACAGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS TCA 72 bp | GAAAGTTGTCTCCACACACAAGCATTTATGTGTTTGTaGATGTGTGTCTCTGTGTACGTGTGTGTGCATGCC | + |
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Preference number: 6 (lower is better) Translates to: ESCLHTQAFMCL*MCVSVYVCVHA Trigger: GGCATGCACACACACGTACACAGAGACACACATTCACAAACACATAAATGCTTGTGTGTGGAGACAACTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS TCA 72 bp | GGCCAGTGGATTTTCATGAACAAAACTCACGCTCAATaGATGCAGAAAGTTGTCTCCACACACAAGCATTTA | + |
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Preference number: 6 (lower is better) Translates to: GQWIFMNKTHAQ*MQKVVSTHKHL Trigger: TAAATGCTTGTGTGTGGAGACAACTTTCTGCATTCATTGAGCGTGAGTTTTGTTCATGAAAATCCACTGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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| CDS CAA 72 bp | AAACAGCTGGGAGTATCTGGCACCAATGATACAATGTaGAGCTTTCAAATGACAAGAGGAATTTTTGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: KQLGVSGTNDTM*SFQMTRGIFEN Trigger: GTTTTCAAAAATTCCTCTTGTCATTTGAAAGCTCAACATTGTATCATTGGTGCCAGATACTCCCAGCTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000625151.1 ENST00000633962.1 ENST00000672977.1 |
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