Pregenerated sensors for LINC00547 (Homo sapiens)
Ensembl gene IDs: ENSG00000275226Ensembl transcript IDs: ENST00000612438.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGAGGTGGGCTCCCACAGCCTCGGACAGCTCTGCCCCTGTGGCTTTaGAGGGTACAGCCTCCCTCCTGGCCGCTTTCCTGGGCTGGCATT | + |
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Preference number: 5 (lower is better) Translates to: GGGLPQPRTALPLWL*RVQPPSWPLSWAGI Trigger: AATGCCAGCCCAGGAAAGCGGCCAGGAGGGAGGCTGTACCCTGCAAAGCCACAGGGGCAGAGCTGTCCGAGGCTGTGGGAGCCCACCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS CCA 90 bp | GATACAGGAGGTGGGCTCCCACAGCCTCGGACAGCTCTGCCCCTGTaGCTTTGCAGGGTACAGCCTCCCTCCTGGCCGCTTTCCTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: DTGGGLPQPRTALPL*LCRVQPPSWPLSWA Trigger: AGCCCAGGAAAGCGGCCAGGAGGGAGGCTGTACCCTGCAAAGCCACAGGGGCAGAGCTGTCCGAGGCTGTGGGAGCCCACCTCCTGTATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS GCA 90 bp | GTCATGCTGATACAGGAGGTGGGCTCCCACAGCCTCGGACAGCTCTaGCCCTGTGGCTTTGCAGGGTACAGCCTCCCTCCTGGCCGCTTT | + |
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Preference number: 5 (lower is better) Translates to: VMLIQEVGSHSLGQL*PCGFAGYSLPPGRF Trigger: AAAGCGGCCAGGAGGGAGGCTGTACCCTGCAAAGCCACAGGGGCAGAGCTGTCCGAGGCTGTGGGAGCCCACCTCCTGTATCAGCATGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS TCA 90 bp | TTGCAGGGTACAGCCTCCCTCCTGGCCGCTTTCCTGGGCTGGCATTaGGTGTCTGTGGCTTCTTTAGGTGCACAGTTCAAGCTTTCAATG | + |
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Preference number: 5 (lower is better) Translates to: LQGTASLLAAFLGWH*VSVASLGAQFKLSM Trigger: CATTGAAAGCTTGAACTGTGCACCTAAAGAAGCCACAGACACTCAATGCCAGCCCAGGAAAGCGGCCAGGAGGGAGGCTGTACCCTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS TCA 90 bp | GCACAGTCCCCATGGCTAAGGAGGCCCCATAATCATCCCAGAAGGTaGAGGAGGAACAAAGGCACATTTACATGGCAGCAAGCAAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: AQSPWLRRPHNHPRR*RRNKGTFTWQQARE Trigger: CTCTCTTGCTTGCTGCCATGTAAATGTGCCTTTGTTCCTCCTTCACCTTCTGGGATGATTATGGGGCCTCCTTAGCCATGGGGACTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS GCA 90 bp | GGCCGCTTTCCTGGGCTGGCATTGAGTGTCTGTGGCTTCTTTAGGTaGACAGTTCAAGCTTTCAATGGATCTACCATTCCGGGATCTGGA | + |
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Preference number: 5 (lower is better) Translates to: GRFPGLALSVCGFFR*TVQAFNGSTIPGSG Trigger: TCCAGATCCCGGAATGGTAGATCCATTGAAAGCTTGAACTGTGCACCTAAAGAAGCCACAGACACTCAATGCCAGCCCAGGAAAGCGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS TCA 90 bp | GCAGTACACCTCTGCCTCGACATCCAGGTATTTCCATACATCCTCTaGAAACTAGGCAGAGGTTCCCAAAACTCAGTTCTCAACTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: AVHLCLDIQVFPYIL*KLGRGSQNSVLNFC Trigger: ACAGAAGTTGAGAACTGAGTTTTGGGAACCTCTGCCTAGTTTTCAGAGGATGTATGGAAATACCTGGATGTCGAGGCAGAGGTGTACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS TCA 90 bp | GTCCCTCCCACAACACGTGGGGATTATGAGAGCTACAATTCAAGATaGGACTTGGGTGAGTACACAGCCAAACTGTATCAAAAGGTAACT | + |
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Preference number: 5 (lower is better) Translates to: VPPTTRGDYESYNSR*DLGEYTAKLYQKVT Trigger: AGTTACCTTTTGATACAGTTTGGCTGTGTACTCACCCAAGTCTCATCTTGAATTGTAGCTCTCATAATCCCCACGTGTTGTGGGAGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS TCA 90 bp | GTCTCTAGGAAGTTCCAAACTTTCCCACATCTTCCTATCTTCTTCTaGGCCCTCCAAATTGTTCTAACCTCTGCCTGTTACCCAGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: VSRKFQTFPHLPIFF*ALQIVLTSACYPVP Trigger: TGGAACTGGGTAACAGGCAGAGGTTAGAACAATTTGGAGGGCTCAGAAGAAGATAGGAAGATGTGGGAAAGTTTGGAACTTCCTAGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS GCA 90 bp | GGAGGAACAAAGGCACATTTACATGGCAGCAAGCAAGAGAGTATGTaGAGGGGAACTGCCCTTTATAAAACCATCAGATCTCATGAGACT | + |
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Preference number: 5 (lower is better) Translates to: GGTKAHLHGSKQESM*RGTALYKTIRSHET Trigger: AGTCTCATGAGATCTGATGGTTTTATAAAGGGCAGTTCCCCTGCACATACTCTCTTGCTTGCTGCCATGTAAATGTGCCTTTGTTCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS GCA 90 bp | AATGATGACATCCATGTACACTCCTTGCAAAGATGGCAAATGACCTaGCAGAAACATACATTCCTGTGTAATCTCTGCAAACCCAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: NDDIHVHSLQRWQMT*QKHTFLCNLCKPKA Trigger: AGCTTTGGGTTTGCAGAGATTACACAGGAATGTATGTTTCTGGCAGGTCATTTGCCATCTTTGCAAGGAGTGTACATGGATGTCATCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS TCA 90 bp | TCGGTAGACACATTGGGATTCATCAAGGAAACAACTCGACCTGTTTaGGAACTACTGGTCTTGGTGAACATCTATTCCTTCTTCTATTCT | + |
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Preference number: 5 (lower is better) Translates to: SVDTLGFIKETTRPV*ELLVLVNIYSFFYS Trigger: AGAATAGAAGAAGGAATAGATGTTCACCAAGACCAGTAGTTCTCAAACAGGTCGAGTTGTTTCCTTGATGAATCCCAATGTGTCTACCGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS TCA 90 bp | TTTGTAATGATGACATCCATGTACACTCCTTGCAAAGATGGCAAATaGCCTGCCAGAAACATACATTCCTGTGTAATCTCTGCAAACCCA | + |
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Preference number: 5 (lower is better) Translates to: FVMMTSMYTPCKDGK*PARNIHSCVISANP Trigger: TGGGTTTGCAGAGATTACACAGGAATGTATGTTTCTGGCAGGTCATTTGCCATCTTTGCAAGGAGTGTACATGGATGTCATCATTACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS CCA 72 bp | GGTGGGCTCCCACAGCCTCGGACAGCTCTGCCCCTGTaGCTTTGCAGGGTACAGCCTCCCTCCTGGCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: GGLPQPRTALPL*LCRVQPPSWPL Trigger: AAGCGGCCAGGAGGGAGGCTGTACCCTGCAAAGCCACAGGGGCAGAGCTGTCCGAGGCTGTGGGAGCCCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS CAA 90 bp | AGGAGGTGGGCTCCCACAGCCTCGGACAGCTCTGCCCCTGTGGCTTaGCAGGGTACAGCCTCCCTCCTGGCCGCTTTCCTGGGCTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: RRWAPTASDSSAPVA*QGTASLLAAFLGWH Trigger: ATGCCAGCCCAGGAAAGCGGCCAGGAGGGAGGCTGTACCCTGCAAAGCCACAGGGGCAGAGCTGTCCGAGGCTGTGGGAGCCCACCTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS GCA 72 bp | CTCCCACAGCCTCGGACAGCTCTGCCCCTGTGGCTTTaGAGGGTACAGCCTCCCTCCTGGCCGCTTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LPQPRTALPLWL*RVQPPSWPLSW Trigger: CCAGGAAAGCGGCCAGGAGGGAGGCTGTACCCTGCAAAGCCACAGGGGCAGAGCTGTCCGAGGCTGTGGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS CAA 72 bp | GCTCCCACAGCCTCGGACAGCTCTGCCCCTGTGGCTTaGCAGGGTACAGCCTCCCTCCTGGCCGCTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: APTASDSSAPVA*QGTASLLAAFL Trigger: CAGGAAAGCGGCCAGGAGGGAGGCTGTACCCTGCAAAGCCACAGGGGCAGAGCTGTCCGAGGCTGTGGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS GCA 72 bp | GGAGCATTTGGGACACAGGGCACCAAGTCCCTAGGCTaGACACAGGAAGGAAGCCCTGAACCAGGCCCACAA | + |
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Preference number: 6 (lower is better) Translates to: GAFGTQGTKSLG*TQEGSPEPGPQ Trigger: TTGTGGGCCTGGTTCAGGGCTTCCTTCCTGTGTGCAGCCTAGGGACTTGGTGCCCTGTGTCCCAAATGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS TCA 72 bp | ATTTCCCTTCTGCACTGCCCTAGCAGAGGTTCTCCATaGGGGCTCCACCCCTGCAGTACACCTCTGCCTCGA | + |
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Preference number: 6 (lower is better) Translates to: ISLLHCPSRGSP*GLHPCSTPLPR Trigger: TCGAGGCAGAGGTGTACTGCAGGGGTGGAGCCCTCATGGAGAACCTCTGCTAGGGCAGTGCAGAAGGGAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS TCA 72 bp | ACAGCCTCCCTCCTGGCCGCTTTCCTGGGCTGGCATTaGGTGTCTGTGGCTTCTTTAGGTGCACAGTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: TASLLAAFLGWH*VSVASLGAQFK Trigger: CTTGAACTGTGCACCTAAAGAAGCCACAGACACTCAATGCCAGCCCAGGAAAGCGGCCAGGAGGGAGGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS CCA 72 bp | AGCTCCACAAGGAAGTACCCCAATAGGGACACTGTGTaGAGGCTCCCACCCTACATTTCCCTTCTGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: SSTRKYPNRDTV*RLPPYISLLHC Trigger: GCAGTGCAGAAGGGAAATGTAGGGTGGGAGCCTCCACACAGTGTCCCTATTGGGGTACTTCCTTGTGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS CAA 72 bp | TACAGCCTCCCTCCTGGCCGCTTTCCTGGGCTGGCATaGAGTGTCTGTGGCTTCTTTAGGTGCACAGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: YSLPPGRFPGLA*SVCGFFRCTVQ Trigger: TTGAACTGTGCACCTAAAGAAGCCACAGACACTCAATGCCAGCCCAGGAAAGCGGCCAGGAGGGAGGCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS CAA 90 bp | TTTGCAGGGTACAGCCTCCCTCCTGGCCGCTTTCCTGGGCTGGCATaGAGTGTCTGTGGCTTCTTTAGGTGCACAGTTCAAGCTTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: FAGYSLPPGRFPGLA*SVCGFFRCTVQAFN Trigger: ATTGAAAGCTTGAACTGTGCACCTAAAGAAGCCACAGACACTCAATGCCAGCCCAGGAAAGCGGCCAGGAGGGAGGCTGTACCCTGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS CCA 72 bp | GACCTGAGCTGTACTTTGGTCACTTTTAGCCATGACTaGAGCATTTGGGACACAGGGCACCAAGTCCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: DLSCTLVTFSHD*SIWDTGHQVPR Trigger: CCTAGGGACTTGGTGCCCTGTGTCCCAAATGCTCCAGTCATGGCTAAAAGTGACCAAAGTACAGCTCAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS GCA 72 bp | CCTGGGCTGGCATTGAGTGTCTGTGGCTTCTTTAGGTaGACAGTTCAAGCTTTCAATGGATCTACCATTCCG | + |
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Preference number: 6 (lower is better) Translates to: PGLALSVCGFFR*TVQAFNGSTIP Trigger: CGGAATGGTAGATCCATTGAAAGCTTGAACTGTGCACCTAAAGAAGCCACAGACACTCAATGCCAGCCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS CCA 72 bp | TCTCAACTTCTGTGCGCTCACAGAACCAACACCATGTaGAAGCTGTCAAGACTTTGGGACTCGCACTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SQLLCAHRTNTM*KLSRLWDSHFL Trigger: CAGAAAGTGCGAGTCCCAAAGTCTTGACAGCTTCCACATGGTGTTGGTTCTGTGAGCGCACAGAAGTTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS TCA 72 bp | CCATGGCTAGGGAGGCCTCAAAATTATCACAGAAGGTaGAGGAGTAGCAAAGGCACATCTTACATGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: PWLGRPQNYHRR*RSSKGTSYMVA Trigger: TGCCACCATGTAAGATGTGCCTTTGCTACTCCTTCACCTTCTGTGATAATTTTGAGGCCTCCCTAGCCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS TCA 72 bp | CTCTGCCTCGACATCCAGGTATTTCCATACATCCTCTaGAAACTAGGCAGAGGTTCCCAAAACTCAGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LCLDIQVFPYIL*KLGRGSQNSVL Trigger: GAGAACTGAGTTTTGGGAACCTCTGCCTAGTTTTCAGAGGATGTATGGAAATACCTGGATGTCGAGGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS CAA 90 bp | GGCTGCTGTGAAGGTCTCTCATATGCCCTGGAGACATTTTACCCATaGTCTTGGGGATTACCCTTTGGTTCCTCATTACTTGTGCAAATT | + |
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Preference number: 6 (lower is better) Translates to: GCCEGLSYALETFYP*SWGLPFGSSLLVQI Trigger: AATTTGCACAAGTAATGAGGAACCAAAGGGTAATCCCCAAGACAATGGGTAAAATGTCTCCAGGGCATATGAGAGACCTTCACAGCAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS TCA 72 bp | TGTGGAAGCTGTCAAGACTTTGGGACTCGCACTTTCTaGAGCAATGACCTGAGCTGTACTTTGGTCACTTTT | + |
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Preference number: 6 (lower is better) Translates to: CGSCQDFGTRTF*SNDLSCTLVTF Trigger: AAAAGTGACCAAAGTACAGCTCAGGTCATTGCTTCAGAAAGTGCGAGTCCCAAAGTCTTGACAGCTTCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS GCA 72 bp | CCCACATCTCATGTCCTCACATTTCAAAACCAACCATaGCTTCCCAACAGTCCCCCAAAGTGTTATCTCATT | + |
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Preference number: 6 (lower is better) Translates to: PTSHVLTFQNQP*LPNSPPKCYLI Trigger: AATGAGATAACACTTTGGGGGACTGTTGGGAAGGCATGGTTGGTTTTGAAATGTGAGGACATGAGATGTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS GCA 72 bp | AAGGCACATTTACATGGCAGCAAGCAAGAGAGTATGTaGAGGGGAACTGCCCTTTATAAAACCATCAGATCT | + |
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Preference number: 6 (lower is better) Translates to: KAHLHGSKQESM*RGTALYKTIRS Trigger: AGATCTGATGGTTTTATAAAGGGCAGTTCCCCTGCACATACTCTCTTGCTTGCTGCCATGTAAATGTGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS CCA 72 bp | CTCTCATATGCCCTGGAGACATTTTACCCATTGTCTTaGGGATTACCCTTTGGTTCCTCATTACTTGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: LSYALETFYPLS*GLPFGSSLLVQ Trigger: TTGCACAAGTAATGAGGAACCAAAGGGTAATCCCCAAGACAATGGGTAAAATGTCTCCAGGGCATATGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS CAA 72 bp | CATTGTCTTGGGGATTACCCTTTGGTTCCTCATTACTaGTGCAAATTTCTGCAGTGGCTTGAATTTCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: HCLGDYPLVPHY*CKFLQWLEFLP Trigger: GGGGAGAAATTCAAGCCACTGCAGAAATTTGCACAAGTAATGAGGAACCAAAGGGTAATCCCCAAGACAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS TCA 72 bp | ACAACACGTGGGGATTATGAGAGCTACAATTCAAGATaGGACTTGGGTGAGTACACAGCCAAACTGTATCAA | + |
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Preference number: 6 (lower is better) Translates to: TTRGDYESYNSR*DLGEYTAKLYQ Trigger: TTGATACAGTTTGGCTGTGTACTCACCCAAGTCTCATCTTGAATTGTAGCTCTCATAATCCCCACGTGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS TCA 72 bp | AAGTTCCAAACTTTCCCACATCTTCCTATCTTCTTCTaGGCCCTCCAAATTGTTCTAACCTCTGCCTGTTAC | + |
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Preference number: 6 (lower is better) Translates to: KFQTFPHLPIFF*ALQIVLTSACY Trigger: GTAACAGGCAGAGGTTAGAACAATTTGGAGGGCTCAGAAGAAGATAGGAAGATGTGGGAAAGTTTGGAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS CAA 90 bp | CTCGGTAGACACATTGGGATTCATCAAGGAAACAACTCGACCTGTTaGAGAACTACTGGTCTTGGTGAACATCTATTCCTTCTTCTATTC | + |
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Preference number: 6 (lower is better) Translates to: LGRHIGIHQGNNSTC*RTTGLGEHLFLLLF Trigger: GAATAGAAGAAGGAATAGATGTTCACCAAGACCAGTAGTTCTCAAACAGGTCGAGTTGTTTCCTTGATGAATCCCAATGTGTCTACCGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS TCA 72 bp | ACATTGGGATTCATCAAGGAAACAACTCGACCTGTTTaGGAACTACTGGTCTTGGTGAACATCTATTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: TLGFIKETTRPV*ELLVLVNIYSF Trigger: GAAGGAATAGATGTTCACCAAGACCAGTAGTTCTCAAACAGGTCGAGTTGTTTCCTTGATGAATCCCAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS GCA 72 bp | ATGACCTGCCAGAAACATACATTCCTGTGTAATCTCTaGAAACCCAAAGCTGCTCCTTTATTCGTGATCTTA | + |
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Preference number: 6 (lower is better) Translates to: MTCQKHTFLCNL*KPKAAPLFVIL Trigger: TAAGATCACGAATAAAGGAGCAGCTTTGGGTTTGCAGAGATTACACAGGAATGTATGTTTCTGGCAGGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS GCA 72 bp | ATCCATGTACACTCCTTGCAAAGATGGCAAATGACCTaGCAGAAACATACATTCCTGTGTAATCTCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: IHVHSLQRWQMT*QKHTFLCNLCK Trigger: TTTGCAGAGATTACACAGGAATGTATGTTTCTGGCAGGTCATTTGCCATCTTTGCAAGGAGTGTACATGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS CAA 72 bp | CACATTGGGATTCATCAAGGAAACAACTCGACCTGTTaGAGAACTACTGGTCTTGGTGAACATCTATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: HIGIHQGNNSTC*RTTGLGEHLFL Trigger: AAGGAATAGATGTTCACCAAGACCAGTAGTTCTCAAACAGGTCGAGTTGTTTCCTTGATGAATCCCAATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS CAA 72 bp | CACATCCTTTGTAATGATGACATCCATGTACACTCCTaGCAAAGATGGCAAATGACCTGCCAGAAACATACA | + |
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Preference number: 6 (lower is better) Translates to: HILCNDDIHVHS*QRWQMTCQKHT Trigger: TGTATGTTTCTGGCAGGTCATTTGCCATCTTTGCAAGGAGTGTACATGGATGTCATCATTACAAAGGATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS TCA 72 bp | AAACAACTCGACCTGTTTGAGAACTACTGGTCTTGGTaGACATCTATTCCTTCTTCTATTCTTTCCAAACTA | + |
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Preference number: 6 (lower is better) Translates to: KQLDLFENYWSW*TSIPSSILSKL Trigger: TAGTTTGGAAAGAATAGAAGAAGGAATAGATGTTCACCAAGACCAGTAGTTCTCAAACAGGTCGAGTTGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS TCA 72 bp | TTTACTCCAGTTTCCAACAAATTCCTCATCTCAATCTaGGACCACCTTAGCCTGGATTTTATTGTCCATATT | + |
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Preference number: 6 (lower is better) Translates to: FTPVSNKFLISI*DHLSLDFIVHI Trigger: AATATGGACAATAAAATCCAGGCTAAGGTGGTCTCAGATTGAGATGAGGAATTTGTTGGAAACTGGAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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| CDS CAA 72 bp | CTGCATATTTTCCAAACTTTTATGCACTGTTACTTCTaGAACACTTTGCTGCTTAGAAATTTCTTCTACCAG | + |
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Preference number: 6 (lower is better) Translates to: LHIFQTFMHCYF*NTLLLRNFFYQ Trigger: CTGGTAGAAGAAATTTCTAAGCAGCAAAGTGTTCAAGAAGTAACAGTGCATAAAAGTTTGGAAAATATGCAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612438.1 |
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