Pregenerated sensors for LINC00543 (Homo sapiens)
Ensembl gene IDs: ENSG00000260704Ensembl transcript IDs: ENST00000567234.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCCTCCCCGCGCTCCCAGCGGGCGCCCGGGGGCTCGTGTCCCGCTaGTCTCGCCCAAGACGGCCGGTCTCGGCCTGCTGCCGGTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SLPALPAGARGLVSR*SRPRRPVSACCRSL Trigger: CAAGGACCGGCAGCAGGCCGAGACCGGCCGTCTTGGGCGAGAGCAGCGGGACACGAGCCCCCGGGCGCCCGCTGGGAGCGCGGGGAGGCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS GCA 90 bp | GAGCGGGCGGAACGGCCTGGACCCCGCGGCCTCTGTTCCCAGCTCTaGGGCCGATCTGAGAGCTGGGACTCCGGGCGGGGAGCGGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: ERAERPGPRGLCSQL*GRSESWDSGRGAGG Trigger: GCCTCCCGCTCCCCGCCCGGAGTCCCAGCTCTCAGATCGGCCGCAGAGCTGGGAACAGAGGCCGCGGGGTCCAGGCCGTTCCGCCCGCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 90 bp | GCTGCCCGGGATTCCCTGGAGAGATTCGCGGCGTCTCCCGAGAGGTaGCGCGCGGTGAGGGCAGGCGAGGTCCCGGCGCCGCGGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: AARDSLERFAASPER*RAVRAGEVPAPRPP Trigger: AGGAGGCCGCGGCGCCGGGACCTCGCCTGCCCTCACCGCGCGCCACCTCTCGGGAGACGCCGCGAATCTCTCCAGGGAATCCCGGGCAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS TCA 90 bp | GGACCAGTCGCGTCCACTCCCGGCCGCCGCGGGGCCCGGGCTCCTTaGCCGTCCTCCAAGGCCACTCGGAGCGCAGCTTCCCTGAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: GPVASTPGRRGARAP*PSSKATRSAASLSP Trigger: TGGGCTCAGGGAAGCTGCGCTCCGAGTGGCCTTGGAGGACGGTCAAGGAGCCCGGGCCCCGCGGCGGCCGGGAGTGGACGCGACTGGTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS GCA 90 bp | GGGCTCGTGTCCCGCTGCTCTCGCCCAAGACGGCCGGTCTCGGCCTaGTGCCGGTCCTTGCTGGGTCTGCGCCGCTGCCCGGGATTCCCT | + |
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Preference number: 5 (lower is better) Translates to: GLVSRCSRPRRPVSA*CRSLLGLRRCPGFP Trigger: AGGGAATCCCGGGCAGCGGCGCAGACCCAGCAAGGACCGGCAGCAGGCCGAGACCGGCCGTCTTGGGCGAGAGCAGCGGGACACGAGCCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS GCA 90 bp | CGGCCGGTCTCGGCCTGCTGCCGGTCCTTGCTGGGTCTGCGCCGCTaGCCGGGATTCCCTGGAGAGATTCGCGGCGTCTCCCGAGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: RPVSACCRSLLGLRR*PGFPGEIRGVSREV Trigger: CACCTCTCGGGAGACGCCGCGAATCTCTCCAGGGAATCCCGGGCAGCGGCGCAGACCCAGCAAGGACCGGCAGCAGGCCGAGACCGGCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS GCA 90 bp | GCCCAAGACGGCCGGTCTCGGCCTGCTGCCGGTCCTTGCTGGGTCTaGGCCGCTGCCCGGGATTCCCTGGAGAGATTCGCGGCGTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: AQDGRSRPAAGPCWV*AAARDSLERFAASP Trigger: GGGAGACGCCGCGAATCTCTCCAGGGAATCCCGGGCAGCGGCGCAGACCCAGCAAGGACCGGCAGCAGGCCGAGACCGGCCGTCTTGGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS GCA 90 bp | CTCGTGTCCCGCTGCTCTCGCCCAAGACGGCCGGTCTCGGCCTGCTaGCGGTCCTTGCTGGGTCTGCGCCGCTGCCCGGGATTCCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: LVSRCSRPRRPVSAC*RSLLGLRRCPGFPG Trigger: TCCAGGGAATCCCGGGCAGCGGCGCAGACCCAGCAAGGACCGGCAGCAGGCCGAGACCGGCCGTCTTGGGCGAGAGCAGCGGGACACGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 90 bp | GCTCTCGCCCAAGACGGCCGGTCTCGGCCTGCTGCCGGTCCTTGCTaGGTCTGCGCCGCTGCCCGGGATTCCCTGGAGAGATTCGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: ALAQDGRSRPAAGPC*VCAAARDSLERFAA Trigger: CGCCGCGAATCTCTCCAGGGAATCCCGGGCAGCGGCGCAGACCCAGCAAGGACCGGCAGCAGGCCGAGACCGGCCGTCTTGGGCGAGAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS GCA 90 bp | TCAAAAGGCGGAACGGGAGCGCTGGTGTGTTCGGCCCGTCAAAGCTaGAGCCGCCCGCGGCCTCCGGCGTCTGGCCTGTCTCGCCTGCGC | + |
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Preference number: 5 (lower is better) Translates to: SKGGTGALVCSARQS*SRPRPPASGLSRLR Trigger: GCGCAGGCGAGACAGGCCAGACGCCGGAGGCCGCGGGCGGCTGCAGCTTTGACGGGCCGAACACACCAGCGCTCCCGTTCCGCCTTTTGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS GCA 90 bp | GCTGCTCTCGCCCAAGACGGCCGGTCTCGGCCTGCTGCCGGTCCTTaGTGGGTCTGCGCCGCTGCCCGGGATTCCCTGGAGAGATTCGCG | + |
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Preference number: 5 (lower is better) Translates to: AALAQDGRSRPAAGP*WVCAAARDSLERFA Trigger: CGCGAATCTCTCCAGGGAATCCCGGGCAGCGGCGCAGACCCAGCAAGGACCGGCAGCAGGCCGAGACCGGCCGTCTTGGGCGAGAGCAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS TCA 90 bp | GCGGAGGTGCGGGGAACCTGGGCCGCAAGCGCCGAAGCCACTCGGTaGAGAAGGCCTGGAGCACTGGCCTTCGACCCGTCGTCGAAGACC | + |
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Preference number: 5 (lower is better) Translates to: AEVRGTWAASAEATR*RRPGALAFDPSSKT Trigger: GGTCTTCGACGACGGGTCGAAGGCCAGTGCTCCAGGCCTTCTTCACCGAGTGGCTTCGGCGCTTGCGGCCCAGGTTCCCCGCACCTCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 90 bp | CCCGCTCCTTCTCTTCACAGCCATCAGAAGGCGCGGCCTGCCACCTaGACAAACGCGGTCTCCCCCAGAGCCCGGTTGCGCCCCGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: PAPSLHSHQKARPAT*TNAVSPRARLRPEA Trigger: GGCTTCGGGGCGCAACCGGGCTCTGGGGGAGACCGCGTTTGTCCAGGTGGCAGGCCGCGCCTTCTGATGGCTGTGAAGAGAAGGAGCGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS GCA 90 bp | CGCGGCCTGCCACCTGGACAAACGCGGTCTCCCCCAGAGCCCGGTTaGGCCCCGAAGCCGGGTTCCGTCCCATCTCCGACAAAGACACTT | + |
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Preference number: 5 (lower is better) Translates to: RGLPPGQTRSPPEPG*APKPGSVPSPTKTL Trigger: AAGTGTCTTTGTCGGAGATGGGACGGAACCCGGCTTCGGGGCGCAACCGGGCTCTGGGGGAGACCGCGTTTGTCCAGGTGGCAGGCCGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 90 bp | GGGCCGCAAGCGCCGAAGCCACTCGGTGAAGAAGGCCTGGAGCACTaGCCTTCGACCCGTCGTCGAAGACCTGGGCTGAGCGATGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: GPQAPKPLGEEGLEH*PSTRRRRPGLSDGG Trigger: GCCACCATCGCTCAGCCCAGGTCTTCGACGACGGGTCGAAGGCCAGTGCTCCAGGCCTTCTTCACCGAGTGGCTTCGGCGCTTGCGGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 90 bp | ACCAGGCCCAAGGGATTTGATTTTCAAAAGGCGGAACGGGAGCGCTaGTGTGTTCGGCCCGTCAAAGCTGCAGCCGCCCGCGGCCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: TRPKGFDFQKAERER*CVRPVKAAAARGLR Trigger: CCGGAGGCCGCGGGCGGCTGCAGCTTTGACGGGCCGAACACACCAGCGCTCCCGTTCCGCCTTTTGAAAATCAAATCCCTTGGGCCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS TCA 90 bp | TCGAAGACCTGGGCTGAGCGATGGTGGCACCAGGCCCAAGGGATTTaGTTTTCAAAAGGCGGAACGGGAGCGCTGGTGTGTTCGGCCCGT | + |
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Preference number: 5 (lower is better) Translates to: SKTWAERWWHQAQGI*FSKGGTGALVCSAR Trigger: ACGGGCCGAACACACCAGCGCTCCCGTTCCGCCTTTTGAAAATCAAATCCCTTGGGCCTGGTGCCACCATCGCTCAGCCCAGGTCTTCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS TCA 90 bp | AAGGCCTGGAGCACTGGCCTTCGACCCGTCGTCGAAGACCTGGGCTaGGCGATGGTGGCACCAGGCCCAAGGGATTTGATTTTCAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: KAWSTGLRPVVEDLG*AMVAPGPRDLIFKR Trigger: CCTTTTGAAAATCAAATCCCTTGGGCCTGGTGCCACCATCGCTCAGCCCAGGTCTTCGACGACGGGTCGAAGGCCAGTGCTCCAGGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS GCA 90 bp | CGAAGCCGGGTTCCGTCCCATCTCCGACAAAGACACTTCCTGATTTaGCCCTCGCCAGACTCCAGCAATTTTCTGGGTCCCCGGGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: RSRVPSHLRQRHFLI*PSPDSSNFLGPREA Trigger: AGCTTCCCGGGGACCCAGAAAATTGCTGGAGTCTGGCGAGGGGCAAATCAGGAAGTGTCTTTGTCGGAGATGGGACGGAACCCGGCTTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 90 bp | CAGGCGCGAGCTAATCTACTCCTTTCCACTCTCTCGGTGGCGCTGTaGCTCTTAAAACCCCCGCTCCTTCTCTTCACAGCCATCAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: QARANLLLSTLSVAL*LLKPPLLLFTAIRR Trigger: CCTTCTGATGGCTGTGAAGAGAAGGAGCGGGGGTTTTAAGAGCCACAGCGCCACCGAGAGAGTGGAAAGGAGTAGATTAGCTCGCGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 90 bp | AAATGGGCCCGTTGTCTACAACACGCCTTGGGGAAGCGTTCGGCCTaGTATTCAAGTATCTCCGCGGATCTACCCCAGCCATTAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: KWARCLQHALGKRSA*YSSISADLPQPLEQ Trigger: CTGCTCTAATGGCTGGGGTAGATCCGCGGAGATACTTGAATACCAGGCCGAACGCTTCCCCAAGGCGTGTTGTAGACAACGGGCCCATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 90 bp | GTTCTTTGCACATGCTCAAATGGGCCCGTTGTCTACAACACGCCTTaGGGAAGCGTTCGGCCTGGTATTCAAGTATCTCCGCGGATCTAC | + |
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Preference number: 5 (lower is better) Translates to: VLCTCSNGPVVYNTP*GSVRPGIQVSPRIY Trigger: GTAGATCCGCGGAGATACTTGAATACCAGGCCGAACGCTTCCCCAAGGCGTGTTGTAGACAACGGGCCCATTTGAGCATGTGCAAAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 90 bp | TGTTATATACGTGGCACATTAGACAATGATTCAGATTCTGGTAACTaGAAAATGACAGTTCCTGGGCGTGATCACAAGTCTACAGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: CYIRGTLDNDSDSGN*KMTVPGRDHKSTEN Trigger: GTTTTCTGTAGACTTGTGATCACGCCCAGGAACTGTCATTTTCCAGTTACCAGAATCTGAATCATTGTCTAATGTGCCACGTATATAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 90 bp | TTGACATGCGTTAATACATCCAGTGTTATGATTGGTTCTCTTGGGTaGATATTTGTCCGGAATGGGAAACTAAAAAGCGATTCATCAAAT | + |
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Preference number: 5 (lower is better) Translates to: LTCVNTSSVMIGSLG*IFVRNGKLKSDSSN Trigger: ATTTGATGAATCGCTTTTTAGTTTCCCATTCCGGACAAATATCCACCCAAGAGAACCAATCATAACACTGGATGTATTAACGCATGTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS GCA 72 bp | GCGCTCCCAGCGGGCGCCCGGGGGCTCGTGTCCCGCTaGTCTCGCCCAAGACGGCCGGTCTCGGCCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: ALPAGARGLVSR*SRPRRPVSACC Trigger: GCAGCAGGCCGAGACCGGCCGTCTTGGGCGAGAGCAGCGGGACACGAGCCCCCGGGCGCCCGCTGGGAGCGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CAA 90 bp | CGGACCAGTCGCGTCCACTCCCGGCCGCCGCGGGGCCCGGGCTCCTaGACCGTCCTCCAAGGCCACTCGGAGCGCAGCTTCCCTGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RTSRVHSRPPRGPGS*TVLQGHSERSFPEP Trigger: GGGCTCAGGGAAGCTGCGCTCCGAGTGGCCTTGGAGGACGGTCAAGGAGCCCGGGCCCCGCGGCGGCCGGGAGTGGACGCGACTGGTCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS TCA 72 bp | GCGTCCACTCCCGGCCGCCGCGGGGCCCGGGCTCCTTaGCCGTCCTCCAAGGCCACTCGGAGCGCAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ASTPGRRGARAP*PSSKATRSAAS Trigger: GGAAGCTGCGCTCCGAGTGGCCTTGGAGGACGGTCAAGGAGCCCGGGCCCCGCGGCGGCCGGGAGTGGACGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS TCA 72 bp | GACCGTCCTCCAAGGCCACTCGGAGCGCAGCTTCCCTaGGCCCAGAGCCTCCCCGCGCTCCCAGCGGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: DRPPRPLGAQLP*AQSLPALPAGA Trigger: GGCGCCCGCTGGGAGCGCGGGGAGGCTCTGGGCTCAGGGAAGCTGCGCTCCGAGTGGCCTTGGAGGACGGTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS GCA 72 bp | GCCCAAGACGGCCGGTCTCGGCCTGCTGCCGGTCCTTaGTGGGTCTGCGCCGCTGCCCGGGATTCCCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: AQDGRSRPAAGP*WVCAAARDSLE Trigger: CTCCAGGGAATCCCGGGCAGCGGCGCAGACCCAGCAAGGACCGGCAGCAGGCCGAGACCGGCCGTCTTGGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 72 bp | GATTCCCTGGAGAGATTCGCGGCGTCTCCCGAGAGGTaGCGCGCGGTGAGGGCAGGCGAGGTCCCGGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: DSLERFAASPER*RAVRAGEVPAP Trigger: CGGCGCCGGGACCTCGCCTGCCCTCACCGCGCGCCACCTCTCGGGAGACGCCGCGAATCTCTCCAGGGAATC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS GCA 72 bp | GGAACGGGAGCGCTGGTGTGTTCGGCCCGTCAAAGCTaGAGCCGCCCGCGGCCTCCGGCGTCTGGCCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: GTGALVCSARQS*SRPRPPASGLS Trigger: AGACAGGCCAGACGCCGGAGGCCGCGGGCGGCTGCAGCTTTGACGGGCCGAACACACCAGCGCTCCCGTTCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS GCA 72 bp | GGCCGGTCTCGGCCTGCTGCCGGTCCTTGCTGGGTCTaGGCCGCTGCCCGGGATTCCCTGGAGAGATTCGCG | + |
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Preference number: 6 (lower is better) Translates to: GRSRPAAGPCWV*AAARDSLERFA Trigger: CGCGAATCTCTCCAGGGAATCCCGGGCAGCGGCGCAGACCCAGCAAGGACCGGCAGCAGGCCGAGACCGGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CAA 90 bp | CGCTGCTCTCGCCCAAGACGGCCGGTCTCGGCCTGCTGCCGGTCCTaGCTGGGTCTGCGCCGCTGCCCGGGATTCCCTGGAGAGATTCGC | + |
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Preference number: 6 (lower is better) Translates to: RCSRPRRPVSACCRS*LGLRRCPGFPGEIR Trigger: GCGAATCTCTCCAGGGAATCCCGGGCAGCGGCGCAGACCCAGCAAGGACCGGCAGCAGGCCGAGACCGGCCGTCTTGGGCGAGAGCAGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 72 bp | GTCCTTGCTGGGTCTGCGCCGCTGCCCGGGATTCCCTaGAGAGATTCGCGGCGTCTCCCGAGAGGTGGCGCG | + |
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Preference number: 6 (lower is better) Translates to: VLAGSAPLPGIP*RDSRRLPRGGA Trigger: CGCGCCACCTCTCGGGAGACGCCGCGAATCTCTCCAGGGAATCCCGGGCAGCGGCGCAGACCCAGCAAGGAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 72 bp | CAAGACGGCCGGTCTCGGCCTGCTGCCGGTCCTTGCTaGGTCTGCGCCGCTGCCCGGGATTCCCTGGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: QDGRSRPAAGPC*VCAAARDSLER Trigger: TCTCTCCAGGGAATCCCGGGCAGCGGCGCAGACCCAGCAAGGACCGGCAGCAGGCCGAGACCGGCCGTCTTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CAA 72 bp | GCCACCTGGACAAACGCGGTCTCCCCCAGAGCCCGGTaGCGCCCCGAAGCCGGGTTCCGTCCCATCTCCGAC | + |
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Preference number: 6 (lower is better) Translates to: ATWTNAVSPRAR*RPEAGFRPISD Trigger: GTCGGAGATGGGACGGAACCCGGCTTCGGGGCGCAACCGGGCTCTGGGGGAGACCGCGTTTGTCCAGGTGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CAA 90 bp | GCGCGGCCTGCCACCTGGACAAACGCGGTCTCCCCCAGAGCCCGGTaGCGCCCCGAAGCCGGGTTCCGTCCCATCTCCGACAAAGACACT | + |
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Preference number: 6 (lower is better) Translates to: ARPATWTNAVSPRAR*RPEAGFRPISDKDT Trigger: AGTGTCTTTGTCGGAGATGGGACGGAACCCGGCTTCGGGGCGCAACCGGGCTCTGGGGGAGACCGCGTTTGTCCAGGTGGCAGGCCGCGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS TCA 72 bp | CGGGGAACCTGGGCCGCAAGCGCCGAAGCCACTCGGTaGAGAAGGCCTGGAGCACTGGCCTTCGACCCGTCG | + |
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Preference number: 6 (lower is better) Translates to: RGTWAASAEATR*RRPGALAFDPS Trigger: CGACGGGTCGAAGGCCAGTGCTCCAGGCCTTCTTCACCGAGTGGCTTCGGCGCTTGCGGCCCAGGTTCCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS GCA 72 bp | CCACCTGGACAAACGCGGTCTCCCCCAGAGCCCGGTTaGGCCCCGAAGCCGGGTTCCGTCCCATCTCCGACA | + |
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Preference number: 6 (lower is better) Translates to: PPGQTRSPPEPG*APKPGSVPSPT Trigger: TGTCGGAGATGGGACGGAACCCGGCTTCGGGGCGCAACCGGGCTCTGGGGGAGACCGCGTTTGTCCAGGTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS GCA 72 bp | CGCTCCTTCTCTTCACAGCCATCAGAAGGCGCGGCCTaGCACCTGGACAAACGCGGTCTCCCCCAGAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: RSFSSQPSEGAA*HLDKRGLPQSP Trigger: CGGGCTCTGGGGGAGACCGCGTTTGTCCAGGTGGCAGGCCGCGCCTTCTGATGGCTGTGAAGAGAAGGAGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 72 bp | TCTCTTCACAGCCATCAGAAGGCGCGGCCTGCCACCTaGACAAACGCGGTCTCCCCCAGAGCCCGGTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: SLHSHQKARPAT*TNAVSPRARLR Trigger: GCGCAACCGGGCTCTGGGGGAGACCGCGTTTGTCCAGGTGGCAGGCCGCGCCTTCTGATGGCTGTGAAGAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 72 bp | GCGCCGAAGCCACTCGGTGAAGAAGGCCTGGAGCACTaGCCTTCGACCCGTCGTCGAAGACCTGGGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: APKPLGEEGLEH*PSTRRRRPGLS Trigger: GCTCAGCCCAGGTCTTCGACGACGGGTCGAAGGCCAGTGCTCCAGGCCTTCTTCACCGAGTGGCTTCGGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 72 bp | GGCCGCAAGCGCCGAAGCCACTCGGTGAAGAAGGCCTaGAGCACTGGCCTTCGACCCGTCGTCGAAGACCTG | + |
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Preference number: 6 (lower is better) Translates to: GRKRRSHSVKKA*STGLRPVVEDL Trigger: CAGGTCTTCGACGACGGGTCGAAGGCCAGTGCTCCAGGCCTTCTTCACCGAGTGGCTTCGGCGCTTGCGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS TCA 72 bp | AGCACTGGCCTTCGACCCGTCGTCGAAGACCTGGGCTaGGCGATGGTGGCACCAGGCCCAAGGGATTTGATT | + |
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Preference number: 6 (lower is better) Translates to: STGLRPVVEDLG*AMVAPGPRDLI Trigger: AATCAAATCCCTTGGGCCTGGTGCCACCATCGCTCAGCCCAGGTCTTCGACGACGGGTCGAAGGCCAGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 72 bp | AAGGGATTTGATTTTCAAAAGGCGGAACGGGAGCGCTaGTGTGTTCGGCCCGTCAAAGCTGCAGCCGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: KGFDFQKAERER*CVRPVKAAAAR Trigger: GCGGGCGGCTGCAGCTTTGACGGGCCGAACACACCAGCGCTCCCGTTCCGCCTTTTGAAAATCAAATCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS TCA 72 bp | TGGGCTGAGCGATGGTGGCACCAGGCCCAAGGGATTTaGTTTTCAAAAGGCGGAACGGGAGCGCTGGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: WAERWWHQAQGI*FSKGGTGALVC Trigger: ACACACCAGCGCTCCCGTTCCGCCTTTTGAAAATCAAATCCCTTGGGCCTGGTGCCACCATCGCTCAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS TCA 72 bp | GCCGGGTTCCGTCCCATCTCCGACAAAGACACTTCCTaGTTTGCCCCTCGCCAGACTCCAGCAATTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: AGFRPISDKDTS*FAPRQTPAIFW Trigger: CCAGAAAATTGCTGGAGTCTGGCGAGGGGCAAATCAGGAAGTGTCTTTGTCGGAGATGGGACGGAACCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 72 bp | CGTTGTCTACAACACGCCTTGGGGAAGCGTTCGGCCTaGTATTCAAGTATCTCCGCGGATCTACCCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: RCLQHALGKRSA*YSSISADLPQP Trigger: TGGCTGGGGTAGATCCGCGGAGATACTTGAATACCAGGCCGAACGCTTCCCCAAGGCGTGTTGTAGACAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS GCA 72 bp | GTTCCGTCCCATCTCCGACAAAGACACTTCCTGATTTaGCCCTCGCCAGACTCCAGCAATTTTCTGGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: VPSHLRQRHFLI*PSPDSSNFLGP Trigger: GGGACCCAGAAAATTGCTGGAGTCTGGCGAGGGGCAAATCAGGAAGTGTCTTTGTCGGAGATGGGACGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 72 bp | GCTAATCTACTCCTTTCCACTCTCTCGGTGGCGCTGTaGCTCTTAAAACCCCCGCTCCTTCTCTTCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: ANLLLSTLSVAL*LLKPPLLLFTA Trigger: GGCTGTGAAGAGAAGGAGCGGGGGTTTTAAGAGCCACAGCGCCACCGAGAGAGTGGAAAGGAGTAGATTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 72 bp | ACATGCTCAAATGGGCCCGTTGTCTACAACACGCCTTaGGGAAGCGTTCGGCCTGGTATTCAAGTATCTCCG | + |
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Preference number: 6 (lower is better) Translates to: TCSNGPVVYNTP*GSVRPGIQVSP Trigger: CGGAGATACTTGAATACCAGGCCGAACGCTTCCCCAAGGCGTGTTGTAGACAACGGGCCCATTTGAGCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CAA 72 bp | CACATGCTCAAATGGGCCCGTTGTCTACAACACGCCTaGGGGAAGCGTTCGGCCTGGTATTCAAGTATCTCC | + |
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Preference number: 6 (lower is better) Translates to: HMLKWARCLQHA*GKRSAWYSSIS Trigger: GGAGATACTTGAATACCAGGCCGAACGCTTCCCCAAGGCGTGTTGTAGACAACGGGCCCATTTGAGCATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CAA 90 bp | TGTTCTTTGCACATGCTCAAATGGGCCCGTTGTCTACAACACGCCTaGGGGAAGCGTTCGGCCTGGTATTCAAGTATCTCCGCGGATCTA | + |
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Preference number: 6 (lower is better) Translates to: CSLHMLKWARCLQHA*GKRSAWYSSISADL Trigger: TAGATCCGCGGAGATACTTGAATACCAGGCCGAACGCTTCCCCAAGGCGTGTTGTAGACAACGGGCCCATTTGAGCATGTGCAAAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 72 bp | AAAATGGATGAAATTTGTTCTTTGCACATGCTCAAATaGGCCCGTTGTCTACAACACGCCTTGGGGAAGCGT | + |
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Preference number: 6 (lower is better) Translates to: KMDEICSLHMLK*ARCLQHALGKR Trigger: ACGCTTCCCCAAGGCGTGTTGTAGACAACGGGCCCATTTGAGCATGTGCAAAGAACAAATTTCATCCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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| CDS CCA 72 bp | CGTGGCACATTAGACAATGATTCAGATTCTGGTAACTaGAAAATGACAGTTCCTGGGCGTGATCACAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: RGTLDNDSDSGN*KMTVPGRDHKS Trigger: AGACTTGTGATCACGCCCAGGAACTGTCATTTTCCAGTTACCAGAATCTGAATCATTGTCTAATGTGCCACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567234.1 |
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