Pregenerated sensors for LINC00536 (Homo sapiens)
Ensembl gene IDs: ENSG00000249917Ensembl transcript IDs: ENST00000505156.2, ENST00000664052.1
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AACCCCCTTTCCCAGGAGTTGCAGGGGGCCAGAAACAAGTCCTGGTaGTCGGTAGTCCTGTACAGGGTTCCCAGCTTCCTTCCTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: NPLSQELQGARNKSW*SVVLYRVPSFLPLQ Trigger: CTGAAGAGGAAGGAAGCTGGGAACCCTGTACAGGACTACCGAGCACCAGGACTTGTTTCTGGCCCCCTGCAACTCCTGGGAAAGGGGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000664052.1 |
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| CDS GCA 90 bp | CTTGGCTCCTCTTCTTGGCGAAGCTGCCTTAACCACCTTTGTCGCTaGCCAGGTGTTTCCCATGCCTGTGGCAGACTTAGAAGGTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LGSSSWRSCLNHLCR*PGVSHACGRLRRWR Trigger: CCTCCACCTTCTAAGTCTGCCACAGGCATGGGAAACACCTGGGCAGCGACAAAGGTGGTTAAGGCAGCTTCGCCAAGAAGAGGAGCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS GCA 90 bp | TTCTCCCTTTCCCAGGAGTTGCAGGGGGCCAGAAACAAGTCCTGGTaGTCGGTAGTCCTGTACAGGGTTCCCAGCTTCCTTCCTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: FSLSQELQGARNKSW*SVVLYRVPSFLPLQ Trigger: CTGAAGAGGAAGGAAGCTGGGAACCCTGTACAGGACTACCGAGCACCAGGACTTGTTTCTGGCCCCCTGCAACTCCTGGGAAAGGGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS GCA 90 bp | GGAAGTGAGCCTGATCATCTCCTTTCCCAGGCCATGCTCTCCTCTTaGTTCCCTCATCAGCGCAAAGCCCATTCTGCTGGACCTGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: GSEPDHLLSQAMLSS*FPHQRKAHSAGPAV Trigger: CACAGCAGGTCCAGCAGAATGGGCTTTGCGCTGATGAGGGAAGCAAGAGGAGAGCATGGCCTGGGAAAGGAGATGATCAGGCTCACTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS CCA 90 bp | TGTCGCTGCCCAGGTGTTTCCCATGCCTGTGGCAGACTTAGAAGGTaGAGGAGTGGAGCCTGCCAGACCAGTTGCAAAGTGCAGAACATG | + |
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Preference number: 5 (lower is better) Translates to: CRCPGVSHACGRLRR*RSGACQTSCKVQNM Trigger: CATGTTCTGCACTTTGCAACTGGTCTGGCAGGCTCCACTCCTCCACCTTCTAAGTCTGCCACAGGCATGGGAAACACCTGGGCAGCGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS CCA 90 bp | GAGTTCTCCCTTTCCCAGGAGTTGCAGGGGGCCAGAAACAAGTCCTaGTGCTCGGTAGTCCTGTACAGGGTTCCCAGCTTCCTTCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: EFSLSQELQGARNKS*CSVVLYRVPSFLPL Trigger: AAGAGGAAGGAAGCTGGGAACCCTGTACAGGACTACCGAGCACCAGGACTTGTTTCTGGCCCCCTGCAACTCCTGGGAAAGGGAGAACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS GCA 90 bp | TGTGGCAGACTTAGAAGGTGGAGGAGTGGAGCCTGCCAGACCAGTTaGAAAGTGCAGAACATGCCTCAGGGCCTCCATTCACAATCCAAT | + |
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Preference number: 5 (lower is better) Translates to: CGRLRRWRSGACQTS*KVQNMPQGLHSQSN Trigger: ATTGGATTGTGAATGGAGGCCCTGAGGCATGTTCTGCACTTTGCAACTGGTCTGGCAGGCTCCACTCCTCCACCTTCTAAGTCTGCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS GCA 90 bp | TGGCTACGTCTAGTTAACCATCTTGGCTCCTCTTCTTGGCGAAGCTaGCTTAACCACCTTTGTCGCTGCCCAGGTGTTTCCCATGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: WLRLVNHLGSSSWRS*LNHLCRCPGVSHAC Trigger: ACAGGCATGGGAAACACCTGGGCAGCGACAAAGGTGGTTAAGGCAGCTTCGCCAAGAAGAGGAGCCAAGATGGTTAACTAGACGTAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS GCA 90 bp | GTCCTGTACAGGGTTCCCAGCTTCCTTCCTCTTCAGCCCAGTGTCTaGATCATCCTTCCATCCACTCTCAATGCCTTCCCTCCAAAGATC | + |
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Preference number: 5 (lower is better) Translates to: VLYRVPSFLPLQPSV*IILPSTLNAFPPKI Trigger: GATCTTTGGAGGGAAGGCATTGAGAGTGGATGGAAGGATGATGCAGACACTGGGCTGAAGAGGAAGGAAGCTGGGAACCCTGTACAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS GCA 90 bp | ACAGAGAAATGGGAAGTGAGCCTGATCATCTCCTTTCCCAGGCCATaGTCTCCTCTTGCTTCCCTCATCAGCGCAAAGCCCATTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: TEKWEVSLIISFPRP*SPLASLISAKPILL Trigger: CAGCAGAATGGGCTTTGCGCTGATGAGGGAAGCAAGAGGAGAGCATGGCCTGGGAAAGGAGATGATCAGGCTCACTTCCCATTTCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS CCA 90 bp | TGTTCCTCCTGGCTACGTCTAGTTAACCATCTTGGCTCCTCTTCTTaGCGAAGCTGCCTTAACCACCTTTGTCGCTGCCCAGGTGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: CSSWLRLVNHLGSSS*RSCLNHLCRCPGVS Trigger: GGAAACACCTGGGCAGCGACAAAGGTGGTTAAGGCAGCTTCGCCAAGAAGAGGAGCCAAGATGGTTAACTAGACGTAGCCAGGAGGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS GCA 90 bp | GACTTAGAAGGTGGAGGAGTGGAGCCTGCCAGACCAGTTGCAAAGTaGAGAACATGCCTCAGGGCCTCCATTCACAATCCAATTTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: DLEGGGVEPARPVAK*RTCLRASIHNPICL Trigger: AAGGCAAATTGGATTGTGAATGGAGGCCCTGAGGCATGTTCTGCACTTTGCAACTGGTCTGGCAGGCTCCACTCCTCCACCTTCTAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS GCA 90 bp | TGCATCATCCTTCCATCCACTCTCAATGCCTTCCCTCCAAAGATCTaGTCAGAATGTACCAGTCTTCCTGACAGCTCAGTCTCTTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: CIILPSTLNAFPPKI*SECTSLPDSSVSWW Trigger: CCACCAAGAGACTGAGCTGTCAGGAAGACTGGTACATTCTGAGCAGATCTTTGGAGGGAAGGCATTGAGAGTGGATGGAAGGATGATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS GCA 90 bp | ATGACCATCAGGTTGTCAGATGGTAGAGCAGCTGCGATGAGTTTATaGACATCTCTGCAGAATTTCCCCCTCACTGAAGTCCTGATGTCA | + |
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Preference number: 5 (lower is better) Translates to: MTIRLSDGRAAAMSL*TSLQNFPLTEVLMS Trigger: TGACATCAGGACTTCAGTGAGGGGGAAATTCTGCAGAGATGTGCATAAACTCATCGCAGCTGCTCTACCATCTGACAACCTGATGGTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS GCA 90 bp | TTCCCCCTCACTGAAGTCCTGATGTCAACAGAGTCCTGGTGCCAATaGCTATTTCCTCATTGTTACTCCATGAGTCAACATACATTTCCC | + |
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Preference number: 5 (lower is better) Translates to: FPLTEVLMSTESWCQ*LFPHCYSMSQHTFP Trigger: GGGAAATGTATGTTGACTCATGGAGTAACAATGAGGAAATAGGCATTGGCACCAGGACTCTGTTGACATCAGGACTTCAGTGAGGGGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS CCA 90 bp | CTGCAGAATTTCCCCCTCACTGAAGTCCTGATGTCAACAGAGTCCTaGTGCCAATGCCTATTTCCTCATTGTTACTCCATGAGTCAACAT | + |
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Preference number: 5 (lower is better) Translates to: LQNFPLTEVLMSTES*CQCLFPHCYSMSQH Trigger: ATGTTGACTCATGGAGTAACAATGAGGAAATAGGCATTGGCACCAGGACTCTGTTGACATCAGGACTTCAGTGAGGGGGAAATTCTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS TCA 90 bp | TTGCGAAGGAGTCAAGTGGGAAAAATTCCAATGAACGTTGTGAGTTaGCTCTGTGTTTGCCACGGTTCTTCCACAGAGAAATGGGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: LRRSQVGKIPMNVVS*LCVCHGSSTEKWEV Trigger: CACTTCCCATTTCTCTGTGGAAGAACCGTGGCAAACACAGAGTCAACTCACAACGTTCATTGGAATTTTTCCCACTTGACTCCTTCGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS GCA 90 bp | CAGAATTTCCCCCTCACTGAAGTCCTGATGTCAACAGAGTCCTGGTaGCAATGCCTATTTCCTCATTGTTACTCCATGAGTCAACATACA | + |
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Preference number: 5 (lower is better) Translates to: QNFPLTEVLMSTESW*QCLFPHCYSMSQHT Trigger: TGTATGTTGACTCATGGAGTAACAATGAGGAAATAGGCATTGGCACCAGGACTCTGTTGACATCAGGACTTCAGTGAGGGGGAAATTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS GCA 90 bp | AGAGCACTGGAGGAGTTCTCTGCTGTATTGGTCAGATCGGTTAGCTaGTGTAGCAATCTAAATCTCAGTGGCCTACCACAAGAAAGATTT | + |
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Preference number: 5 (lower is better) Translates to: RALEEFSAVLVRSVS*CSNLNLSGLPQERF Trigger: AAATCTTTCTTGTGGTAGGCCACTGAGATTTAGATTGCTACAGCAGCTAACCGATCTGACCAATACAGCAGAGAACTCCTCCAGTGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664052.1 |
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| CDS CCA 90 bp | TGCCATCACTCCAGATTTTCTGTGGCTCATTTCCGTTCATGTTCTTaGATGCAGAATGCATCCTGGCAAATCCTGCTTTCTTCCTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: CHHSRFSVAHFRSCS*MQNASWQILLSSFH Trigger: ATGGAAGGAAGAAAGCAGGATTTGCCAGGATGCATTCTGCATCCAAGAACATGAACGGAAATGAGCCACAGAAAATCTGGAGTGATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS CCA 90 bp | TTATTGCTCGGTCTGTTCACCATGCAGGAAGAGACTAATCCTCTGTaGTCCAATAATTTTCTTCCACATTTTGGCACTACCACCAACACG | + |
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Preference number: 5 (lower is better) Translates to: LLLGLFTMQEETNPL*SNNFLPHFGTTTNT Trigger: CGTGTTGGTGGTAGTGCCAAAATGTGGAAGAAAATTATTGGACCACAGAGGATTAGTCTCTTCCTGCATGGTGAACAGACCGAGCAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS TCA 90 bp | CGATCTCAGACCCATTCAGATTGTCAGCTTGTTGGCATTCTGCTGTaGAACAATGGCAGAATGGGTGTGATGTCACTGTTTTTGATTTGT | + |
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Preference number: 5 (lower is better) Translates to: RSQTHSDCQLVGILL*NNGRMGVMSLFLIC Trigger: ACAAATCAAAAACAGTGACATCACACCCATTCTGCCATTGTTTCACAGCAGAATGCCAACAAGCTGACAATCTGAATGGGTCTGAGATCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS GCA 90 bp | CAGATTTTCTGTGGCTCATTTCCGTTCATGTTCTTGGATGCAGAATaGATCCTGGCAAATCCTGCTTTCTTCCTTCCATCAAAAACACAG | + |
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Preference number: 5 (lower is better) Translates to: QIFCGSFPFMFLDAE*ILANPAFFLPSKTQ Trigger: CTGTGTTTTTGATGGAAGGAAGAAAGCAGGATTTGCCAGGATGCATTCTGCATCCAAGAACATGAACGGAAATGAGCCACAGAAAATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS CCA 90 bp | CAAATGTGTAGACCTAGGGTCTCTTCCACTCCCTTTAGTTTTGCGTaGATATACCCAGACCATTTTTATATGAAGAAATCCTCCCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: QMCRPRVSSTPFSFA*IYPDHFYMKKSSLS Trigger: GGAAAGGGAGGATTTCTTCATATAAAAATGGTCTGGGTATATCCACGCAAAACTAAAGGGAGTGGAAGAGACCCTAGGTCTACACATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS TCA 90 bp | TTTCTGAGTGTGTCTGTGAAGGTGTTTCCAGAGGAGGTTAGCATTTaGATCAGTAGACTGAGTAAAGAAGATCCACCTTTATCTATGTGG | + |
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Preference number: 5 (lower is better) Translates to: FLSVSVKVFPEEVSI*ISRLSKEDPPLSMW Trigger: CCACATAGATAAAGGTGGATCTTCTTTACTCAGTCTACTGATTCAAATGCTAACCTCCTCTGGAAACACCTTCACAGACACACTCAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664052.1 |
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| CDS TCA 90 bp | TACATTTCCCATTACTTCATAAATCACTTTATCAGAAGCACTGTTTaGAGCTGGCAGAGAAATCCAAGAAACCATACACTGAAATGGGAC | + |
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Preference number: 5 (lower is better) Translates to: YISHYFINHFIRSTV*SWQRNPRNHTLKWD Trigger: GTCCCATTTCAGTGTATGGTTTCTTGGATTTCTCTGCCAGCTTCAAACAGTGCTTCTGATAAAGTGATTTATGAAGTAATGGGAAATGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS GCA 72 bp | TCCCAGGAGTTGCAGGGGGCCAGAAACAAGTCCTGGTaGTCGGTAGTCCTGTACAGGGTTCCCAGCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SQELQGARNKSW*SVVLYRVPSFL Trigger: AAGGAAGCTGGGAACCCTGTACAGGACTACCGAGCACCAGGACTTGTTTCTGGCCCCCTGCAACTCCTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS CCA 72 bp | CTTTCCCAGGAGTTGCAGGGGGCCAGAAACAAGTCCTaGTGCTCGGTAGTCCTGTACAGGGTTCCCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LSQELQGARNKS*CSVVLYRVPSF Trigger: GAAGCTGGGAACCCTGTACAGGACTACCGAGCACCAGGACTTGTTTCTGGCCCCCTGCAACTCCTGGGAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS GCA 72 bp | GGTGGAGGAGTGGAGCCTGCCAGACCAGTTGCAAAGTaGAGAACATGCCTCAGGGCCTCCATTCACAATCCA | + |
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Preference number: 6 (lower is better) Translates to: GGGVEPARPVAK*RTCLRASIHNP Trigger: TGGATTGTGAATGGAGGCCCTGAGGCATGTTCTGCACTTTGCAACTGGTCTGGCAGGCTCCACTCCTCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS GCA 72 bp | GCCTGTGGCAGACTTAGAAGGTGGAGGAGTGGAGCCTaGCAGACCAGTTGCAAAGTGCAGAACATGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: ACGRLRRWRSGA*QTSCKVQNMPQ Trigger: CTGAGGCATGTTCTGCACTTTGCAACTGGTCTGGCAGGCTCCACTCCTCCACCTTCTAAGTCTGCCACAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS CCA 72 bp | CCAGGTGTTTCCCATGCCTGTGGCAGACTTAGAAGGTaGAGGAGTGGAGCCTGCCAGACCAGTTGCAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: PGVSHACGRLRR*RSGACQTSCKV Trigger: CACTTTGCAACTGGTCTGGCAGGCTCCACTCCTCCACCTTCTAAGTCTGCCACAGGCATGGGAAACACCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS CAA 72 bp | TTGAGAGCACTGGAGGAGTTCTCCCTTTCCCAGGAGTaGCAGGGGGCCAGAAACAAGTCCTGGTGCTCGGTA | + |
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Preference number: 6 (lower is better) Translates to: LRALEEFSLSQE*QGARNKSWCSV Trigger: TACCGAGCACCAGGACTTGTTTCTGGCCCCCTGCAACTCCTGGGAAAGGGAGAACTCCTCCAGTGCTCTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS GCA 72 bp | CTTAGAAGGTGGAGGAGTGGAGCCTGCCAGACCAGTTaGAAAGTGCAGAACATGCCTCAGGGCCTCCATTCA | + |
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Preference number: 6 (lower is better) Translates to: LRRWRSGACQTS*KVQNMPQGLHS Trigger: TGAATGGAGGCCCTGAGGCATGTTCTGCACTTTGCAACTGGTCTGGCAGGCTCCACTCCTCCACCTTCTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS GCA 72 bp | CCTGATCATCTCCTTTCCCAGGCCATGCTCTCCTCTTaGTTCCCTCATCAGCGCAAAGCCCATTCTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PDHLLSQAMLSS*FPHQRKAHSAG Trigger: TCCAGCAGAATGGGCTTTGCGCTGATGAGGGAAGCAAGAGGAGAGCATGGCCTGGGAAAGGAGATGATCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS GCA 72 bp | TCTTCTTGGCGAAGCTGCCTTAACCACCTTTGTCGCTaGCCAGGTGTTTCCCATGCCTGTGGCAGACTTAGA | + |
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Preference number: 6 (lower is better) Translates to: SSWRSCLNHLCR*PGVSHACGRLR Trigger: TCTAAGTCTGCCACAGGCATGGGAAACACCTGGGCAGCGACAAAGGTGGTTAAGGCAGCTTCGCCAAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS GCA 72 bp | AGGGTTCCCAGCTTCCTTCCTCTTCAGCCCAGTGTCTaGATCATCCTTCCATCCACTCTCAATGCCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: RVPSFLPLQPSV*IILPSTLNAFP Trigger: AGGGAAGGCATTGAGAGTGGATGGAAGGATGATGCAGACACTGGGCTGAAGAGGAAGGAAGCTGGGAACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS GCA 72 bp | CTAGTTAACCATCTTGGCTCCTCTTCTTGGCGAAGCTaGCTTAACCACCTTTGTCGCTGCCCAGGTGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LVNHLGSSSWRS*LNHLCRCPGVS Trigger: GGAAACACCTGGGCAGCGACAAAGGTGGTTAAGGCAGCTTCGCCAAGAAGAGGAGCCAAGATGGTTAACTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS CCA 72 bp | TGGCTACGTCTAGTTAACCATCTTGGCTCCTCTTCTTaGCGAAGCTGCCTTAACCACCTTTGTCGCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: WLRLVNHLGSSS*RSCLNHLCRCP Trigger: TGGGCAGCGACAAAGGTGGTTAAGGCAGCTTCGCCAAGAAGAGGAGCCAAGATGGTTAACTAGACGTAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS CAA 72 bp | CCAACACGTGCATTGAGGTCCCCCATGACCATCAGGTaGTCAGATGGTAGAGCAGCTGCGATGAGTTTATGC | + |
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Preference number: 6 (lower is better) Translates to: PTRALRSPMTIR*SDGRAAAMSLC Trigger: GCATAAACTCATCGCAGCTGCTCTACCATCTGACAACCTGATGGTCATGGGGGACCTCAATGCACGTGTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS CAA 90 bp | GCACTACCACCAACACGTGCATTGAGGTCCCCCATGACCATCAGGTaGTCAGATGGTAGAGCAGCTGCGATGAGTTTATGCACATCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ALPPTRALRSPMTIR*SDGRAAAMSLCTSL Trigger: CAGAGATGTGCATAAACTCATCGCAGCTGCTCTACCATCTGACAACCTGATGGTCATGGGGGACCTCAATGCACGTGTTGGTGGTAGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS GCA 72 bp | GCCCAGTGTCTGCATCATCCTTCCATCCACTCTCAATaGCTTCCCTCCAAAGATCTGCTCAGAATGTACCAG | + |
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Preference number: 6 (lower is better) Translates to: AQCLHHPSIHSQ*LPSKDLLRMYQ Trigger: CTGGTACATTCTGAGCAGATCTTTGGAGGGAAGGCATTGAGAGTGGATGGAAGGATGATGCAGACACTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS CAA 72 bp | GACCAGCCTGTCACCACGGTGAAACCCTGTCTCTACTaGTCTCTTCAAGGACTGTGCCACAATGCAGTATCT | + |
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Preference number: 6 (lower is better) Translates to: DQPVTTVKPCLY*SLQGLCHNAVS Trigger: AGATACTGCATTGTGGCACAGTCCTTGAAGAGACAAGTAGAGACAGGGTTTCACCGTGGTGACAGGCTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS GCA 72 bp | CTTCCATCCACTCTCAATGCCTTCCCTCCAAAGATCTaGTCAGAATGTACCAGTCTTCCTGACAGCTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: LPSTLNAFPPKI*SECTSLPDSSV Trigger: GACTGAGCTGTCAGGAAGACTGGTACATTCTGAGCAGATCTTTGGAGGGAAGGCATTGAGAGTGGATGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS CCA 72 bp | AGCTGGCAGAGAAATCCAAGAAACCATACACTGAAATaGGACCTGGTGGGAGACCACATCTCTGTGTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SWQRNPRNHTLK*DLVGDHISVSE Trigger: CTCAGACACAGAGATGTGGTCTCCCACCAGGTCCCATTTCAGTGTATGGTTTCTTGGATTTCTCTGCCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS GCA 72 bp | CTTCCCTCATCAGCGCAAAGCCCATTCTGCTGGACCTaGTGTGCATACATTTCTCTAGATGATTGGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LPSSAQSPFCWT*CAYISLDDWLL Trigger: AAGAAGCCAATCATCTAGAGAAATGTATGCACAGCAGGTCCAGCAGAATGGGCTTTGCGCTGATGAGGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS GCA 72 bp | CCCCTCACTGAAGTCCTGATGTCAACAGAGTCCTGGTaGCAATGCCTATTTCCTCATTGTTACTCCATGAGT | + |
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Preference number: 6 (lower is better) Translates to: PLTEVLMSTESW*QCLFPHCYSMS Trigger: ACTCATGGAGTAACAATGAGGAAATAGGCATTGGCACCAGGACTCTGTTGACATCAGGACTTCAGTGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS GCA 72 bp | AGGTTGTCAGATGGTAGAGCAGCTGCGATGAGTTTATaGACATCTCTGCAGAATTTCCCCCTCACTGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: RLSDGRAAAMSL*TSLQNFPLTEV Trigger: GACTTCAGTGAGGGGGAAATTCTGCAGAGATGTGCATAAACTCATCGCAGCTGCTCTACCATCTGACAACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS CCA 72 bp | TTCCCCCTCACTGAAGTCCTGATGTCAACAGAGTCCTaGTGCCAATGCCTATTTCCTCATTGTTACTCCATG | + |
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Preference number: 6 (lower is better) Translates to: FPLTEVLMSTES*CQCLFPHCYSM Trigger: CATGGAGTAACAATGAGGAAATAGGCATTGGCACCAGGACTCTGTTGACATCAGGACTTCAGTGAGGGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS CAA 90 bp | CTGCCATCACTCCAGATTTTCTGTGGCTCATTTCCGTTCATGTTCTaGGATGCAGAATGCATCCTGGCAAATCCTGCTTTCTTCCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LPSLQIFCGSFPFMF*DAECILANPAFFLP Trigger: TGGAAGGAAGAAAGCAGGATTTGCCAGGATGCATTCTGCATCCAAGAACATGAACGGAAATGAGCCACAGAAAATCTGGAGTGATGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS CAA 90 bp | AGGAAGAGACTAATCCTCTGTGGTCCAATAATTTTCTTCCACATTTaGGCACTACCACCAACACGTGCATTGAGGTCCCCCATGACCATC | + |
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Preference number: 6 (lower is better) Translates to: RKRLILCGPIIFFHI*ALPPTRALRSPMTI Trigger: GATGGTCATGGGGGACCTCAATGCACGTGTTGGTGGTAGTGCCAAAATGTGGAAGAAAATTATTGGACCACAGAGGATTAGTCTCTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS GCA 72 bp | CTGTCTCTACTTGTCTCTTCAAGGACTGTGCCACAATaGAGTATCTTCATGGTGAATGAAAGGCCCCAACTC | + |
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Preference number: 6 (lower is better) Translates to: LSLLVSSRTVPQ*SIFMVNERPQL Trigger: GAGTTGGGGCCTTTCATTCACCATGAAGATACTGCATTGTGGCACAGTCCTTGAAGAGACAAGTAGAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS GCA 72 bp | GAGGAGTTCTCTGCTGTATTGGTCAGATCGGTTAGCTaGTGTAGCAATCTAAATCTCAGTGGCCTACCACAA | + |
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Preference number: 6 (lower is better) Translates to: EEFSAVLVRSVS*CSNLNLSGLPQ Trigger: TTGTGGTAGGCCACTGAGATTTAGATTGCTACAGCAGCTAACCGATCTGACCAATACAGCAGAGAACTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664052.1 |
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| CDS CAA 72 bp | CTAATCCTCTGTGGTCCAATAATTTTCTTCCACATTTaGGCACTACCACCAACACGTGCATTGAGGTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: LILCGPIIFFHI*ALPPTRALRSP Trigger: GGGGGACCTCAATGCACGTGTTGGTGGTAGTGCCAAAATGTGGAAGAAAATTATTGGACCACAGAGGATTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS CAA 90 bp | CTTGCGAAGGAGTCAAGTGGGAAAAATTCCAATGAACGTTGTGAGTaGACTCTGTGTTTGCCACGGTTCTTCCACAGAGAAATGGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: LAKESSGKNSNERCE*TLCLPRFFHREMGS Trigger: ACTTCCCATTTCTCTGTGGAAGAACCGTGGCAAACACAGAGTCAACTCACAACGTTCATTGGAATTTTTCCCACTTGACTCCTTCGCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS TCA 72 bp | TTGGGATGGTTTTCCAGGAAGCCCTCCTCCAAGCTATaGTTCAGAGACCCAAGTATTTTTCACTTTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: LGWFSRKPSSKL*FRDPSIFHFVA Trigger: AGCCACAAAGTGAAAAATACTTGGGTCTCTGAATCATAGCTTGGAGGAGGGCTTCCTGGAAAACCATCCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664052.1 |
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| CDS CAA 72 bp | CTCCAGATTTTCTGTGGCTCATTTCCGTTCATGTTCTaGGATGCAGAATGCATCCTGGCAAATCCTGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: LQIFCGSFPFMF*DAECILANPAF Trigger: GAAAGCAGGATTTGCCAGGATGCATTCTGCATCCAAGAACATGAACGGAAATGAGCCACAGAAAATCTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS CAA 72 bp | TTGGGTAACGATCTCAGACCCATTCAGATTGTCAGCTaGTTGGCATTCTGCTGTGAAACAATGGCAGAATGG | + |
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Preference number: 6 (lower is better) Translates to: LGNDLRPIQIVS*LAFCCETMAEW Trigger: CCATTCTGCCATTGTTTCACAGCAGAATGCCAACAAGCTGACAATCTGAATGGGTCTGAGATCGTTACCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS TCA 72 bp | ACCCATTCAGATTGTCAGCTTGTTGGCATTCTGCTGTaGAACAATGGCAGAATGGGTGTGATGTCACTGTTT | + |
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Preference number: 6 (lower is better) Translates to: THSDCQLVGILL*NNGRMGVMSLF Trigger: AAACAGTGACATCACACCCATTCTGCCATTGTTTCACAGCAGAATGCCAACAAGCTGACAATCTGAATGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS GCA 72 bp | ACTGAAGTCCTGATGTCAACAGAGTCCTGGTGCCAATaGCTATTTCCTCATTGTTACTCCATGAGTCAACAT | + |
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Preference number: 6 (lower is better) Translates to: TEVLMSTESWCQ*LFPHCYSMSQH Trigger: ATGTTGACTCATGGAGTAACAATGAGGAAATAGGCATTGGCACCAGGACTCTGTTGACATCAGGACTTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS CCA 72 bp | TCCAGATTTTCTGTGGCTCATTTCCGTTCATGTTCTTaGATGCAGAATGCATCCTGGCAAATCCTGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SRFSVAHFRSCS*MQNASWQILLS Trigger: AGAAAGCAGGATTTGCCAGGATGCATTCTGCATCCAAGAACATGAACGGAAATGAGCCACAGAAAATCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS CAA 72 bp | GAGTCAAGTGGGAAAAATTCCAATGAACGTTGTGAGTaGACTCTGTGTTTGCCACGGTTCTTCCACAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: ESSGKNSNERCE*TLCLPRFFHRE Trigger: TTCTCTGTGGAAGAACCGTGGCAAACACAGAGTCAACTCACAACGTTCATTGGAATTTTTCCCACTTGACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS CAA 72 bp | CCAAGCTATGATTCAGAGACCCAAGTATTTTTCACTTaGTGGCTCTGCCATCTTCTGGTTCTGGGGTCATTT | + |
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Preference number: 6 (lower is better) Translates to: PSYDSETQVFFT*WLCHLLVLGSF Trigger: AAATGACCCCAGAACCAGAAGATGGCAGAGCCACAAAGTGAAAAATACTTGGGTCTCTGAATCATAGCTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664052.1 |
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| CDS TCA 72 bp | AGTCAAGTGGGAAAAATTCCAATGAACGTTGTGAGTTaGCTCTGTGTTTGCCACGGTTCTTCCACAGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SQVGKIPMNVVS*LCVCHGSSTEK Trigger: TTTCTCTGTGGAAGAACCGTGGCAAACACAGAGTCAACTCACAACGTTCATTGGAATTTTTCCCACTTGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS CAA 72 bp | TTTTTGTTTACACAAAGTTTAATGCGGATGTCTCTGTaGGGATGGTTTTCCAGGAAGCCCTCCTCCAAGCTA | + |
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Preference number: 6 (lower is better) Translates to: FLFTQSLMRMSL*GWFSRKPSSKL Trigger: TAGCTTGGAGGAGGGCTTCCTGGAAAACCATCCCAACAGAGACATCCGCATTAAACTTTGTGTAAACAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664052.1 |
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| CDS TCA 72 bp | TGTTTCCAGAGGAGGTTAGCATTTGAATCAGTAGACTaGGTAAAGAAGATCCACCTTTATCTATGTGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: CFQRRLAFESVD*VKKIHLYLCGQ Trigger: CTGCCCACATAGATAAAGGTGGATCTTCTTTACTCAGTCTACTGATTCAAATGCTAACCTCCTCTGGAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664052.1 |
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| CDS TCA 72 bp | GTGTCTGTGAAGGTGTTTCCAGAGGAGGTTAGCATTTaGATCAGTAGACTGAGTAAAGAAGATCCACCTTTA | + |
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Preference number: 6 (lower is better) Translates to: VSVKVFPEEVSI*ISRLSKEDPPL Trigger: TAAAGGTGGATCTTCTTTACTCAGTCTACTGATTCAAATGCTAACCTCCTCTGGAAACACCTTCACAGACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664052.1 |
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| CDS GCA 72 bp | TCTGTGATTACAAGTTATTGCTCGGTCTGTTCACCATaGAGGAAGAGACTAATCCTCTGTGGTCCAATAATT | + |
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Preference number: 6 (lower is better) Translates to: SVITSYCSVCSP*RKRLILCGPII Trigger: AATTATTGGACCACAGAGGATTAGTCTCTTCCTGCATGGTGAACAGACCGAGCAATAACTTGTAATCACAGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS CCA 72 bp | AGATTGTCAGCTTGTTGGCATTCTGCTGTGAAACAATaGCAGAATGGGTGTGATGTCACTGTTTTTGATTTG | + |
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Preference number: 6 (lower is better) Translates to: RLSACWHSAVKQ*QNGCDVTVFDL Trigger: CAAATCAAAAACAGTGACATCACACCCATTCTGCCATTGTTTCACAGCAGAATGCCAACAAGCTGACAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS CAA 72 bp | GAAGAAATCCTCCCTTTCCAAACTCCTTATTCCAACTaGCGAAGGAGTCAAGTGGGAAAAATTCCAATGAAC | + |
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Preference number: 6 (lower is better) Translates to: EEILPFQTPYSN*RRSQVGKIPMN Trigger: GTTCATTGGAATTTTTCCCACTTGACTCCTTCGCAAGTTGGAATAAGGAGTTTGGAAAGGGAGGATTTCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS CAA 90 bp | TTTTTATATGAAGAAATCCTCCCTTTCCAAACTCCTTATTCCAACTaGCGAAGGAGTCAAGTGGGAAAAATTCCAATGAACGTTGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: FLYEEILPFQTPYSN*RRSQVGKIPMNVVS Trigger: ACTCACAACGTTCATTGGAATTTTTCCCACTTGACTCCTTCGCAAGTTGGAATAAGGAGTTTGGAAAGGGAGGATTTCTTCATATAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000505156.2 ENST00000664052.1 |
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| CDS CAA 90 bp | ATACATTTCCCATTACTTCATAAATCACTTTATCAGAAGCACTGTTaGAAGCTGGCAGAGAAATCCAAGAAACCATACACTGAAATGGGA | + |
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Preference number: 6 (lower is better) Translates to: IHFPLLHKSLYQKHC*KLAEKSKKPYTEMG Trigger: TCCCATTTCAGTGTATGGTTTCTTGGATTTCTCTGCCAGCTTCAAACAGTGCTTCTGATAAAGTGATTTATGAAGTAATGGGAAATGTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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| CDS CAA 90 bp | CTGTCTCACTCTGCTGTAATTAATGTGGTCATGTTAAGCATGATCTaGAGAATTGAAGAGATTAGGCACTCTCTGCTTATTTTCTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: LSHSAVINVVMLSMI*RIEEIRHSLLIFFN Trigger: ATTAAAGAAAATAAGCAGAGAGTGCCTAATCTCTTCAATTCTCAAGATCATGCTTAACATGACCACATTAATTACAGCAGAGTGAGACAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505156.2 |
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