Pregenerated sensors for LINC00534 (Homo sapiens)
Ensembl gene IDs: ENSG00000253394Ensembl transcript IDs: ENST00000517400.6, ENST00000523283.5, ENST00000523406.2, ENST00000524361.5, ENST00000653734.1, ENST00000654785.1, ENST00000654946.1, ENST00000655123.1, ENST00000655219.1, ENST00000655523.1, ENST00000658299.1, ENST00000658342.1, ENST00000659030.1, ENST00000661519.1, ENST00000662145.1, ENST00000662692.1, ENST00000663098.1, ENST00000663329.1, ENST00000663619.1, ENST00000665280.1, ENST00000666641.1, ENST00000667296.1, ENST00000667565.1, ENST00000668720.1, ENST00000668745.1, ENST00000670903.1, ENST00000671657.1
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGGAGGCAGGGAAGCTCCTTGATGGCCCGGGGTGGGGTCTTCACCTaGAACTGGCTAGAGCCCTTGCTGCATGATGGTCTGAAGCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: WRQGSSLMARGGVFT*NWLEPLLHDGLKLD Trigger: ATCAAGCTTCAGACCATCATGCAGCAAGGGCTCTAGCCAGTTCCAGGTGAAGACCCCACCCCGGGCCATCAAGGAGCTTCCCTGCCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667296.1 |
||
| CDS CCA 90 bp | CAGGGAAGCTCCTTGATGGCCCGGGGTGGGGTCTTCACCTGGAACTaGCTAGAGCCCTTGCTGCATGATGGTCTGAAGCTTGATGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QGSSLMARGGVFTWN*LEPLLHDGLKLDGL Trigger: AAGACCATCAAGCTTCAGACCATCATGCAGCAAGGGCTCTAGCCAGTTCCAGGTGAAGACCCCACCCCGGGCCATCAAGGAGCTTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667296.1 |
||
| CDS CCA 90 bp | CTGCTGGCTTTCACCTGCGACTCTTTGCCTGAGGGCTTTCTCAGGTaGCCAGAGCTAATGGGGCCCACACCTGTGGAAAATTCTTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLAFTCDSLPEGFLR*PELMGPTPVENSLP Trigger: AGGCAAAGAATTTTCCACAGGTGTGGGCCCCATTAGCTCTGGCCACCTGAGAAAGCCCTCAGGCAAAGAGTCGCAGGTGAAAGCCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662145.1 |
||
| CDS TCA 90 bp | ACATCCATAGGGAGCAGCTCTCAACCACAGAATGACTGGAACTGGTaGGCAGCTCCAAGTCATAGCCACACTGTTTCCCAGGGTGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TSIGSSSQPQNDWNW*AAPSHSHTVSQGAP Trigger: GGGAGCACCCTGGGAAACAGTGTGGCTATGACTTGGAGCTGCTCACCAGTTCCAGTCATTCTGTGGTTGAGAGCTGCTCCCTATGGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 19 transcripts: ENST00000523283.5 ENST00000523406.2 ENST00000524361.5 ENST00000653734.1 ENST00000654785.1 ENST00000655219.1 ENST00000655523.1 ENST00000658299.1 ENST00000658342.1 ENST00000659030.1 ENST00000661519.1 ENST00000662692.1 ENST00000663329.1 ENST00000665280.1 ENST00000667296.1 ENST00000667565.1 ENST00000668720.1 ENST00000668745.1 ENST00000671657.1 |
||
| CDS TCA 90 bp | GCCTTCTTCCATTGGTCATGCCCTAGCCAATGTCATCCCATCAAGTaGTGGGAAGAGGGCTATTTGGGCAGAGGGCACACTGATGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AFFHWSCPSQCHPIK*WEEGYLGRGHTDVA Trigger: GGCCACATCAGTGTGCCCTCTGCCCAAATAGCCCTCTTCCCATCACTTGATGGGATGACATTGGCTAGGGCATGACCAATGGAAGAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654785.1 ENST00000662692.1 |
||
| CDS GCA 90 bp | CTGTTCAGGCTACCACTCTCCCTTCTGAATTGCCCTTTTATTTCTTaGCCACTCCACTCTCCAGGTACCAGGGTCTTCATGGGCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LFRLPLSLLNCPFIS*PLHSPGTRVFMGSP Trigger: GGGAGAGCCCATGAAGACCCTGGTACCTGGAGAGTGGAGTGGGCAAGAAATAAAAGGGCAATTCAGAAGGGAGAGTGGTAGCCTGAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662692.1 |
||
| CDS CCA 90 bp | CTGCTGGCTTTCACCTGCGACTCTTTGCCTGAGGGCTTTCTCAGGTaGCCAGAGCTAATGGGGCCCACACCTGTGGAAAATAGAAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLAFTCDSLPEGFLR*PELMGPTPVENRSN Trigger: ATTACTTCTATTTTCCACAGGTGTGGGCCCCATTAGCTCTGGCCACCTGAGAAAGCCCTCAGGCAAAGAGTCGCAGGTGAAAGCCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517400.6 |
||
| CDS TCA 90 bp | GAGGCAATGGCTCTCCAACTGAAGATGCTTCTGCACTCATTTCTGTaGACCTCTAACTGCTGGCTTTCACCTGCGACTCTTTGCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EAMALQLKMLLHSFL*TSNCWLSPATLCLR Trigger: CCTCAGGCAAAGAGTCGCAGGTGAAAGCCAGCAGTTAGAGGTTCACAGAAATGAGTGCAGAAGCATCTTCAGTTGGAGAGCCATTGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 24 transcripts: ENST00000517400.6 ENST00000523283.5 ENST00000523406.2 ENST00000524361.5 ENST00000653734.1 ENST00000654785.1 ENST00000654946.1 ENST00000655123.1 ENST00000655219.1 ENST00000655523.1 ENST00000658299.1 ENST00000658342.1 ENST00000661519.1 ENST00000662145.1 ENST00000662692.1 ENST00000663098.1 ENST00000663329.1 ENST00000663619.1 ENST00000666641.1 ENST00000667296.1 ENST00000667565.1 ENST00000668745.1 ENST00000670903.1 ENST00000671657.1 |
||
| CDS GCA 90 bp | TTGGCACTATTGACATTTGGGGCTATTTCTTTGCTGTGGGGGCTATaGTGTGTGCATTGTTGGATGCTTAGCTGCATCTCTGGCCCTACC | + |
|
Preference number: 5 (lower is better) Translates to: LALLTFGAISLLWGL*CVHCWMLSCISGPT Trigger: GGTAGGGCCAGAGATGCAGCTAAGCATCCAACAATGCACACAGCATAGCCCCCACAGCAAAGAAATAGCCCCAAATGTCAATAGTGCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655219.1 |
||
| CDS CCA 90 bp | GAGGCTGGGAAGTCCCAAGATCAAGGTGCCAGCAGATTTGGTGTCTaGACAATGCCTACTTCTTGGTTCATAGATGGCCATCTTCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: EAGKSQDQGASRFGV*TMPTSWFIDGHLLT Trigger: AGTGAGAAGATGGCCATCTATGAACCAAGAAGTAGGCATTGTCCAGACACCAAATCTGCTGGCACCTTGATCTTGGGACTTCCCAGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655123.1 |
||
| CDS CCA 90 bp | AGTTCTGGAGGCTGGGAAGTCCCAAGATCAAGGTGCCAGCAGATTTaGTGTCTGGACAATGCCTACTTCTTGGTTCATAGATGGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SSGGWEVPRSRCQQI*CLDNAYFLVHRWPS Trigger: AGATGGCCATCTATGAACCAAGAAGTAGGCATTGTCCAGACACCAAATCTGCTGGCACCTTGATCTTGGGACTTCCCAGCCTCCAGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655123.1 |
||
| CDS CCA 90 bp | CTTTTATTTCTTGCCCACTCCACTCTCCAGGTACCAGGGTCTTCATaGGCTCTCCCAGGTAATCCACATGTATGGCTCTTTCATGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: LLFLAHSTLQVPGSS*ALPGNPHVWLFHGS Trigger: GGATCCATGAAAGAGCCATACATGTGGATTACCTGGGAGAGCCCATGAAGACCCTGGTACCTGGAGAGTGGAGTGGGCAAGAAATAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662692.1 |
||
| CDS TCA 90 bp | GTTACGACAAGTGTATTCCCCAGAAGCTATAGCACATTAACTGGGTaGCCAAGGTTAGAATGTTCACCAACGGCAGCCCCTGTGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VTTSVFPRSYSTLTG*PRLECSPTAAPVLL Trigger: AAGCAGCACAGGGGCTGCCGTTGGTGAACATTCTAACCTTGGTCACCCAGTTAATGTGCTATAGCTTCTGGGGAATACACTTGTCGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662692.1 |
||
| CDS TCA 90 bp | AGCATTAATAGAAGGCCTCAGGAAAGTTGCAATCATGGCATAAGGTaGAGGGGAAGCCAGCACCTTCTCTACATGGCAGCAGGAGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SINRRPQESCNHGIR*RGSQHLLYMAAGET Trigger: TGTCTCTCCTGCTGCCATGTAGAGAAGGTGCTGGCTTCCCCTTCACCTTATGCCATGATTGCAACTTTCCTGAGGCCTTCTATTAATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667565.1 |
||
| CDS CCA 90 bp | CAGGTACCAGGGTCTTCATGGGCTCTCCCAGGTAATCCACATGTATaGCTCTTTCATGGATCCTTCATCTCACCCTTTATTCCCCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: QVPGSSWALPGNPHV*LFHGSFISPFIPQH Trigger: ATGTTGGGGAATAAAGGGTGAGATGAAGGATCCATGAAAGAGCCATACATGTGGATTACCTGGGAGAGCCCATGAAGACCCTGGTACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662692.1 |
||
| CDS CCA 90 bp | CAGATTAGTTCTTGGAGGGGCTCCAGCCTAGAAGGTGTTGAGGCCTaGGTGCAAGCCCAAATTGTTATGATGCCTAAAACTTATGTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: QISSWRGSSLEGVEA*VQAQIVMMPKTYVL Trigger: TAGCACATAAGTTTTAGGCATCATAACAATTTGGGCTTGCACCCAGGCCTCAACACCTTCTAGGCTGGAGCCCCTCCAAGAACTAATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658342.1 |
||
| CDS GCA 90 bp | TTTATTTCTCACAGTTCTGGAGGCTGGGAAGTCCCAAGATCAAGGTaGCAGCAGATTTGGTGTCTGGACAATGCCTACTTCTTGGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FISHSSGGWEVPRSR*QQIWCLDNAYFLVH Trigger: ATGAACCAAGAAGTAGGCATTGTCCAGACACCAAATCTGCTGGCACCTTGATCTTGGGACTTCCCAGCCTCCAGAACTGTGAGAAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655123.1 |
||
| CDS CCA 90 bp | GTGATTCTCGAAATGTGGTCTCCAGACATCAGCATTAGCACCATCTaGAGATGTGTAGAAATGCACATTCTTGGGCCTCATCCCAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: VILEMWSPDISISTI*RCVEMHILGPHPRH Trigger: ATGTCTGGGATGAGGCCCAAGAATGTGCATTTCTACACATCTCCAGATGGTGCTAATGCTGATGTCTGGAGACCACATTTCGAGAATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663619.1 |
||
| CDS TCA 90 bp | GAAGATTCCCAAATATTTCACAGCAAGAGGCAATGGCTCTCCAACTaGAGATGCTTCTGCACTCATTTCTGTGAACCTCTAACTGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EDSQIFHSKRQWLSN*RCFCTHFCEPLTAG Trigger: GCCAGCAGTTAGAGGTTCACAGAAATGAGTGCAGAAGCATCTTCAGTTGGAGAGCCATTGCCTCTTGCTGTGAAATATTTGGGAATCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 24 transcripts: ENST00000517400.6 ENST00000523283.5 ENST00000523406.2 ENST00000524361.5 ENST00000653734.1 ENST00000654785.1 ENST00000654946.1 ENST00000655123.1 ENST00000655219.1 ENST00000655523.1 ENST00000658299.1 ENST00000658342.1 ENST00000661519.1 ENST00000662145.1 ENST00000662692.1 ENST00000663098.1 ENST00000663329.1 ENST00000663619.1 ENST00000666641.1 ENST00000667296.1 ENST00000667565.1 ENST00000668745.1 ENST00000670903.1 ENST00000671657.1 |
||
| CDS GCA 90 bp | AAAGTCTCATCTGAGACAAGACAAGTCCCTTCTGCCTATGAGCCTTaGATGCCTTCATTTGAGGGTGGCGAAAATGAAAAGGTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KVSSETRQVPSAYEP*MPSFEGGENEKVFR Trigger: TCTGAAGACCTTTTCATTTTCGCCACCCTCAAATGAAGGCATGCAAGGCTCATAGGCAGAAGGGACTTGTCTTGTCTCAGATGAGACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667565.1 |
||
| CDS CCA 90 bp | GATCAAGGTGCCAGCAGATTTGGTGTCTGGACAATGCCTACTTCTTaGTTCATAGATGGCCATCTTCTCACTGTAAACTCACATGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: DQGASRFGVWTMPTS*FIDGHLLTVNSHDR Trigger: TCTGTCATGTGAGTTTACAGTGAGAAGATGGCCATCTATGAACCAAGAAGTAGGCATTGTCCAGACACCAAATCTGCTGGCACCTTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655123.1 |
||
| CDS CCA 90 bp | TTCTTCGAGACTCAGGCCAAGACACTTCTTTCAGGAAGTCTTCTGTaGTATTTCCAGATTACGTTAGGCACCCTTCTTCTGTGTTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: FFETQAKTLLSGSLL*YFQITLGTLLLCSH Trigger: ATGTGAACACAGAAGAAGGGTGCCTAACGTAATCTGGAAATACCACAGAAGACTTCCTGAAAGAAGTGTCTTGGCCTGAGTCTCGAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655219.1 |
||
| CDS GCA 90 bp | TTCTCCTTTATATTCCCCCATCCATTAACCTTTTCTGGTAGTATTTaGATGATTCCTCTCCTGTCTGTCCTCCACGATCAACCGTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FSFIFPHPLTFSGSI*MIPLLSVLHDQPFQ Trigger: CTGAAACGGTTGATCGTGGAGGACAGACAGGAGAGGAATCATGCAAATACTACCAGAAAAGGTTAATGGATGGGGGAATATAAAGGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659030.1 |
||
| CDS CCA 90 bp | AGCCATTGTAGGGTTATTAATTGGCCTAACTTCAATATTGCTTTGTaGAAAATAGAGATGCCTGTAGTCCTAGCTGCTTGCGAGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SHCRVINWPNFNIAL*KIEMPVVLAACEAE Trigger: CTCAGCCTCGCAAGCAGCTAGGACTACAGGCATCTCTATTTTCCACAAAGCAATATTGAAGTTAGGCCAATTAATAACCCTACAATGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654946.1 |
||
| CDS CCA 90 bp | ACATTTTCAATTTCTCCCAAGAACCTTTCCTTTGCATTCACAACTTaGCTGTTAGGCACAAAAGACCCAGGTTTCAGCTCATGGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TFSISPKNLSFAFTT*LLGTKDPGFSSWWL Trigger: AAGCCACCATGAGCTGAAACCTGGGTCTTTTGTGCCTAACAGCCAAGTTGTGAATGCAAAGGAAAGGTTCTTGGGAGAAATTGAAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654946.1 ENST00000661519.1 |
||
| CDS CCA 90 bp | GTGGAGAGTCACTGCAGTTTTCCAGATAAGAAGACATTTTTACTTTaGTGGGAGAAACCACCATACACCTTCCCAAGCAAGCATCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VESHCSFPDKKTFLL*WEKPPYTFPSKHQN Trigger: ATTCTGATGCTTGCTTGGGAAGGTGTATGGTGGTTTCTCCCACCAAAGTAAAAATGTCTTCTTATCTGGAAAACTGCAGTGACTCTCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663619.1 |
||
| CDS TCA 90 bp | AATTCAGTCTCTGGAGATCCCCATATTAAGCTTTCTCCGAATCCTTaGTTATTACAGTTTGGAAGTTTCTGTTCAGGCTACCACTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NSVSGDPHIKLSPNP*LLQFGSFCSGYHSP Trigger: GGGAGAGTGGTAGCCTGAACAGAAACTTCCAAACTGTAATAATCAAGGATTCGGAGAAAGCTTAATATGGGGATCTCCAGAGACTGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662692.1 |
||
| CDS TCA 90 bp | TCAAGTCGATTATTTCCCTCTCCCTTCCCAGAGGCAATCTCATCCTaGTTTATATCACCATGGATGGTTTTGCCTGTTCTAGAACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSRLFPSPFPEAISS*FISPWMVLPVLELS Trigger: AGAAAGTTCTAGAACAGGCAAAACCATCCATGGTGATATAAATCAGGATGAGATTGCCTCTGGGAAGGGAGAGGGAAATAATCGACTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670903.1 |
||
| CDS CCA 90 bp | GAGAGTCACTGCAGTTTTCCAGATAAGAAGACATTTTTACTTTGGTaGGAGAAACCACCATACACCTTCCCAAGCAAGCATCAGAATCTA | + |
|
Preference number: 5 (lower is better) Translates to: ESHCSFPDKKTFLLW*EKPPYTFPSKHQNL Trigger: TAGATTCTGATGCTTGCTTGGGAAGGTGTATGGTGGTTTCTCCCACCAAAGTAAAAATGTCTTCTTATCTGGAAAACTGCAGTGACTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663619.1 |
||
| CDS TCA 90 bp | TACTTCTTGGTTCATAGATGGCCATCTTCTCACTGTAAACTCACATaGCAGATGTCTAAGATTGAACTTGCATGCCTTCATTTGAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YFLVHRWPSSHCKLT*QMSKIELACLHLRV Trigger: CACCCTCAAATGAAGGCATGCAAGTTCAATCTTAGACATCTGTCATGTGAGTTTACAGTGAGAAGATGGCCATCTATGAACCAAGAAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655123.1 |
||
| CDS TCA 90 bp | GCACCATTATACTCAATGGTGAAATTTGAAAAGCTTGAAGTAGCTTaGCATAGCATTGAAAGATCCAGCCAGAGGAACCAGGCAAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: APLYSMVKFEKLEVA*HSIERSSQRNQARK Trigger: TTTCCTTGCCTGGTTCCTCTGGCTGGATCTTTCAATGCTATGTCAAGCTACTTCAAGCTTTTCAAATTTCACCATTGAGTATAATGGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663098.1 |
||
| CDS CCA 90 bp | AAACATGGAAATATTACATACCGACTTCAATGTAATAGCTACCTCTaGAGAGAAGAGGAAGGGATTGATAGATGGGGTTTTGGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: KHGNITYRLQCNSYL*REEEGIDRWGFGCI Trigger: GATGCAGCCAAAACCCCATCTATCAATCCCTTCCTCTTCTCTCCAGAGGTAGCTATTACATTGAAGTCGGTATGTAATATTTCCATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000517400.6 ENST00000523406.2 ENST00000659030.1 ENST00000662145.1 |
||
| CDS CCA 90 bp | ATTATCTCGGCTATGAGTCTTCATGGAAGAATGTTTCTTTTCTCTTaGCACAGGGAGGGCATCTTCCACATGATAGTTTTTATCTCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: IISAMSLHGRMFLFS*HREGIFHMIVFISY Trigger: GTAGGAGATAAAAACTATCATGTGGAAGATGCCCTCCCTGTGCCAAGAGAAAAGAAACATTCTTCCATGAAGACTCATAGCCGAGATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000524361.5 ENST00000655523.1 ENST00000658299.1 |
||
| CDS TCA 90 bp | GCTTTTGACATGCCTTTCTCTCTAAGCTTCATCATTTCTAGCTTTTaGTTCCAAGTGAGAGACATGAAACTCTTCCTTTCCCTCAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: AFDMPFSLSFIISSF*FQVRDMKLFLSLKH Trigger: GTGTTTGAGGGAAAGGAAGAGTTTCATGTCTCTCACTTGGAATCAAAAGCTAGAAATGATGAAGCTTAGAGAGAAAGGCATGTCAAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654946.1 ENST00000661519.1 |
||
| CDS TCA 90 bp | GATGTGACAGCTTTAGTGATTCCACTTACTAACAGTGTAATAAACTaGAGCAAGGCTGTGATAGTGCCAATCATAAGAAGCAACTCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: DVTALVIPLTNSVIN*SKAVIVPIIRSNSL Trigger: TAGGGAGTTGCTTCTTATGATTGGCACTATCACAGCCTTGCTTCAGTTTATTACACTGTTAGTAAGTGGAATCACTAAAGCTGTCACATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658342.1 |
||
| CDS TCA 90 bp | ATCAGCCACGTGAAATCTCTTAAGATTTTTACCTCTTTACTCCAGTaGCTTATCAATGCAAATAGGCCTCTGTCCATCAACTGGTATGTT | + |
|
Preference number: 5 (lower is better) Translates to: ISHVKSLKIFTSLLQ*LINANRPLSINWYV Trigger: AACATACCAGTTGATGGACAGAGGCCTATTTGCATTGATAAGTCACTGGAGTAAAGAGGTAAAAATCTTAAGAGATTTCACGTGGCTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653734.1 |
||
| CDS CCA 90 bp | CTTCCTTTCCCTCAAACACTTAGAAGCCATTGTAGGGTTATTAATTaGCCTAACTTCAATATTGCTTTGTGGAAAATAGAGATGCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LPFPQTLRSHCRVIN*PNFNIALWKIEMPV Trigger: TACAGGCATCTCTATTTTCCACAAAGCAATATTGAAGTTAGGCCAATTAATAACCCTACAATGGCTTCTAAGTGTTTGAGGGAAAGGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654946.1 |
||
| CDS CCA 90 bp | AGCCATTGTAGGGTTATTAATTGGCCTAACTTCAATATTGCTTTGTaGAAAATAGAGATGCCTTTAGCAGGTTATTCTTCATGGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SHCRVINWPNFNIAL*KIEMPLAGYSSWFL Trigger: CAGAAACCATGAAGAATAACCTGCTAAAGGCATCTCTATTTTCCACAAAGCAATATTGAAGTTAGGCCAATTAATAACCCTACAATGGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661519.1 |
||
| CDS CCA 90 bp | CTTCCTTTCCCTCAAACACTTAGAAGCCATTGTAGGGTTATTAATTaGCCTAACTTCAATATTGCTTTGTGGAAAATAGAGATGCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LPFPQTLRSHCRVIN*PNFNIALWKIEMPL Trigger: TAAAGGCATCTCTATTTTCCACAAAGCAATATTGAAGTTAGGCCAATTAATAACCCTACAATGGCTTCTAAGTGTTTGAGGGAAAGGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661519.1 |
||
| CDS TCA 72 bp | CACTCTGCTCTGTCTAGTGGAGGCAGGGAAGCTCCTTaGTGGCCCGGGGTGGGGTCTTCACCTGGAACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: HSALSSGGREAP*WPGVGSSPGTG Trigger: GCCAGTTCCAGGTGAAGACCCCACCCCGGGCCATCAAGGAGCTTCCCTGCCTCCACTAGACAGAGCAGAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667296.1 |
||
| CDS CCA 72 bp | CTAGTGGAGGCAGGGAAGCTCCTTGATGGCCCGGGGTaGGGTCTTCACCTGGAACTGGCTAGAGCCCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LVEAGKLLDGPG*GLHLELARALA Trigger: AGCAAGGGCTCTAGCCAGTTCCAGGTGAAGACCCCACCCCGGGCCATCAAGGAGCTTCCCTGCCTCCACTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667296.1 |
||
| CDS CCA 72 bp | GGAAGCTCCTTGATGGCCCGGGGTGGGGTCTTCACCTaGAACTGGCTAGAGCCCTTGCTGCATGATGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSSLMARGGVFT*NWLEPLLHDGL Trigger: CAGACCATCATGCAGCAAGGGCTCTAGCCAGTTCCAGGTGAAGACCCCACCCCGGGCCATCAAGGAGCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667296.1 |
||
| CDS CCA 72 bp | TCCTTGATGGCCCGGGGTGGGGTCTTCACCTGGAACTaGCTAGAGCCCTTGCTGCATGATGGTCTGAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLMARGGVFTWN*LEPLLHDGLKL Trigger: AAGCTTCAGACCATCATGCAGCAAGGGCTCTAGCCAGTTCCAGGTGAAGACCCCACCCCGGGCCATCAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667296.1 |
||
| CDS GCA 72 bp | TCCAGGCTAGAGTGCCGTGGCATGATCTCGACTCACTaGAACCTTCGCCTCCTGGGTGCAAGCTATTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SRLECRGMISTH*NLRLLGASYSP Trigger: AGGAGAATAGCTTGCACCCAGGAGGCGAAGGTTGCAGTGAGTCGAGATCATGCCACGGCACTCTAGCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665280.1 |
||
| CDS TCA 72 bp | GGGAGCAGCTCTCAACCACAGAATGACTGGAACTGGTaGGCAGCTCCAAGTCATAGCCACACTGTTTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSSSQPQNDWNW*AAPSHSHTVSQ Trigger: CTGGGAAACAGTGTGGCTATGACTTGGAGCTGCTCACCAGTTCCAGTCATTCTGTGGTTGAGAGCTGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000523283.5 ENST00000523406.2 ENST00000524361.5 ENST00000653734.1 ENST00000654785.1 ENST00000655123.1 ENST00000655219.1 ENST00000655523.1 ENST00000658299.1 ENST00000658342.1 ENST00000659030.1 ENST00000661519.1 ENST00000662692.1 ENST00000663098.1 ENST00000663329.1 ENST00000665280.1 ENST00000667296.1 ENST00000667565.1 ENST00000668720.1 ENST00000668745.1 ENST00000671657.1 |
||
| CDS GCA 72 bp | CTTTGCTGTGGGGGCTATGCTGTGTGCATTGTTGGATaGTTAGCTGCATCTCTGGCCCTACCCACTAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: LCCGGYAVCIVG*LAASLALPTRC Trigger: GCATCTAGTGGGTAGGGCCAGAGATGCAGCTAAGCATCCAACAATGCACACAGCATAGCCCCCACAGCAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655219.1 |
||
| CDS CCA 72 bp | GGGAAGAGGGCTATTTGGGCAGAGGGCACACTGATGTaGCCTCTGTTAAGGCATAAAACCTACCGTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GKRAIWAEGTLM*PLLRHKTYRPT Trigger: TGTGGGACGGTAGGTTTTATGCCTTAACAGAGGCCACATCAGTGTGCCCTCTGCCCAAATAGCCCTCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654785.1 ENST00000662692.1 |
||
| CDS CCA 72 bp | CTTGCCCACTCCACTCTCCAGGTACCAGGGTCTTCATaGGCTCTCCCAGGTAATCCACATGTATGGCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LAHSTLQVPGSS*ALPGNPHVWLF Trigger: AAAGAGCCATACATGTGGATTACCTGGGAGAGCCCATGAAGACCCTGGTACCTGGAGAGTGGAGTGGGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662692.1 |
||
| CDS GCA 72 bp | CACAGTTCTGGAGGCTGGGAAGTCCCAAGATCAAGGTaGCAGCAGATTTGGTGTCTGGACAATGCCTACTTC | + |
|
Preference number: 6 (lower is better) Translates to: HSSGGWEVPRSR*QQIWCLDNAYF Trigger: GAAGTAGGCATTGTCCAGACACCAAATCTGCTGGCACCTTGATCTTGGGACTTCCCAGCCTCCAGAACTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655123.1 |
||
| CDS CAA 72 bp | CAAAGGCTGAGTGAATCCGGACTGGTTAGTCATTGGTaGCCGGGCTTTCTGTACTGCATGGGTCCCAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: QRLSESGLVSHW*PGFLYCMGPNP Trigger: TGGATTGGGACCCATGCAGTACAGAAAGCCCGGCAACCAATGACTAACCAGTCCGGATTCACTCAGCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653734.1 |
||
| CDS CAA 90 bp | TCTGTTCAGGCTACCACTCTCCCTTCTGAATTGCCCTTTTATTTCTaGCCCACTCCACTCTCCAGGTACCAGGGTCTTCATGGGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVQATTLPSELPFYF*PTPLSRYQGLHGLS Trigger: GGAGAGCCCATGAAGACCCTGGTACCTGGAGAGTGGAGTGGGCAAGAAATAAAAGGGCAATTCAGAAGGGAGAGTGGTAGCCTGAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662692.1 |
||
| CDS TCA 72 bp | AGAAGGCCTCAGGAAAGTTGCAATCATGGCATAAGGTaGAGGGGAAGCCAGCACCTTCTCTACATGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRPQESCNHGIR*RGSQHLLYMAA Trigger: TGCTGCCATGTAGAGAAGGTGCTGGCTTCCCCTTCACCTTATGCCATGATTGCAACTTTCCTGAGGCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667565.1 |
||
| CDS GCA 72 bp | TTGGGGCTATTTCTTTGCTGTGGGGGCTATGCTGTGTaGATTGTTGGATGCTTAGCTGCATCTCTGGCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: LGLFLCCGGYAV*IVGCLAASLAL Trigger: TAGGGCCAGAGATGCAGCTAAGCATCCAACAATGCACACAGCATAGCCCCCACAGCAAAGAAATAGCCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655219.1 |
||
| CDS CCA 72 bp | TCTTGGAGGGGCTCCAGCCTAGAAGGTGTTGAGGCCTaGGTGCAAGCCCAAATTGTTATGATGCCTAAAACT | + |
|
Preference number: 6 (lower is better) Translates to: SWRGSSLEGVEA*VQAQIVMMPKT Trigger: AGTTTTAGGCATCATAACAATTTGGGCTTGCACCCAGGCCTCAACACCTTCTAGGCTGGAGCCCCTCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658342.1 |
||
| CDS CCA 72 bp | GGCTGGGAAGTCCCAAGATCAAGGTGCCAGCAGATTTaGTGTCTGGACAATGCCTACTTCTTGGTTCATAGA | + |
|
Preference number: 6 (lower is better) Translates to: GWEVPRSRCQQI*CLDNAYFLVHR Trigger: TCTATGAACCAAGAAGTAGGCATTGTCCAGACACCAAATCTGCTGGCACCTTGATCTTGGGACTTCCCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655123.1 |
||
| CDS CAA 72 bp | GAATGTTCACCAACGGCAGCCCCTGTGCTGCTTCACTaGTTCTGCAAATTCAGTCTCTGGAGATCCCCATAT | + |
|
Preference number: 6 (lower is better) Translates to: ECSPTAAPVLLH*FCKFSLWRSPY Trigger: ATATGGGGATCTCCAGAGACTGAATTTGCAGAACAAGTGAAGCAGCACAGGGGCTGCCGTTGGTGAACATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662692.1 |
||
| CDS TCA 72 bp | GCTCTCCAACTGAAGATGCTTCTGCACTCATTTCTGTaGACCTCTAACTGCTGGCTTTCACCTGCGACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: ALQLKMLLHSFL*TSNCWLSPATL Trigger: AAGAGTCGCAGGTGAAAGCCAGCAGTTAGAGGTTCACAGAAATGAGTGCAGAAGCATCTTCAGTTGGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 24 transcripts: ENST00000517400.6 ENST00000523283.5 ENST00000523406.2 ENST00000524361.5 ENST00000653734.1 ENST00000654785.1 ENST00000654946.1 ENST00000655123.1 ENST00000655219.1 ENST00000655523.1 ENST00000658299.1 ENST00000658342.1 ENST00000661519.1 ENST00000662145.1 ENST00000662692.1 ENST00000663098.1 ENST00000663329.1 ENST00000663619.1 ENST00000666641.1 ENST00000667296.1 ENST00000667565.1 ENST00000668745.1 ENST00000670903.1 ENST00000671657.1 |
||
| CDS TCA 72 bp | AGTGTATTCCCCAGAAGCTATAGCACATTAACTGGGTaGCCAAGGTTAGAATGTTCACCAACGGCAGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SVFPRSYSTLTG*PRLECSPTAAP Trigger: AGGGGCTGCCGTTGGTGAACATTCTAACCTTGGTCACCCAGTTAATGTGCTATAGCTTCTGGGGAATACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662692.1 |
||
| CDS GCA 72 bp | GTGTGCTCTTTAAGCTGCACCACTGCCTTTGTAGGCTaGCCACTACTTACTGTGACCATATCTGTGCTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: VCSLSCTTAFVG*PLLTVTISVLR Trigger: TCTAAGCACAGATATGGTCACAGTAAGTAGTGGGCAGCCTACAAAGGCAGTGGTGCAGCTTAAAGAGCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658342.1 |
||
| CDS CCA 72 bp | GAGACTTCTGGGCTAGGAGGGCCATTTGCTGATATCTaGAAAGGGAGTGGAACTGTGAGAAAACCAACTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ETSGLGGPFADI*KGSGTVRKPTF Trigger: GAAAGTTGGTTTTCTCACAGTTCCACTCCCTTTCCAGATATCAGCAAATGGCCCTCCTAGCCCAGAAGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000523406.2 ENST00000666641.1 ENST00000667565.1 ENST00000668745.1 |
||
| CDS CAA 90 bp | AAACAACAAGCAGTCAGAAGAAGAGGGCTAATGGTGGCAAATGCCTaGACAGGAAATCTCAATGATGATTGTGGCAGCAGCCTTGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: KQQAVRRRGLMVANA*TGNLNDDCGSSLAC Trigger: GCATGCAAGGCTGCTGCCACAATCATCATTGAGATTTCCTGTCAAGGCATTTGCCACCATTAGCCCTCTTCTTCTGACTGCTTGTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653734.1 |
||
| CDS TCA 72 bp | GTAAGCAATGTTCACGCCACTGCATTCCAGCTTGACTaGCAAAATAAAACCCTCTCTGGAGACTTCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VSNVHATAFQLD*QNKTLSGDFWA Trigger: AGCCCAGAAGTCTCCAGAGAGGGTTTTATTTTGTCAGTCAAGCTGGAATGCAGTGGCGTGAACATTGCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523406.2 |
||
| CDS GCA 72 bp | TTGACATTTGGGGCTATTTCTTTGCTGTGGGGGCTATaGTGTGTGCATTGTTGGATGCTTAGCTGCATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LTFGAISLLWGL*CVHCWMLSCIS Trigger: AGAGATGCAGCTAAGCATCCAACAATGCACACAGCATAGCCCCCACAGCAAAGAAATAGCCCCAAATGTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655219.1 |
||
| CDS GCA 72 bp | AGACAAGACAAGTCCCTTCTGCCTATGAGCCTTGCATaGCTTCATTTGAGGGTGGCGAAAATGAAAAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RQDKSLLPMSLA*LHLRVAKMKRS Trigger: AGACCTTTTCATTTTCGCCACCCTCAAATGAAGGCATGCAAGGCTCATAGGCAGAAGGGACTTGTCTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667565.1 |
||
| CDS GCA 72 bp | TCTGAGACAAGACAAGTCCCTTCTGCCTATGAGCCTTaGATGCCTTCATTTGAGGGTGGCGAAAATGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SETRQVPSAYEP*MPSFEGGENEK Trigger: CTTTTCATTTTCGCCACCCTCAAATGAAGGCATGCAAGGCTCATAGGCAGAAGGGACTTGTCTTGTCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667565.1 |
||
| CDS GCA 72 bp | GAAGTCATTTACTGTCATGAGAACAAGGGGGAAATCTaGCCACATGATACAATCACCTTCCACCAGGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: EVIYCHENKGEI*PHDTITFHQVP Trigger: AGGGACCTGGTGGAAGGTGATTGTATCATGTGGGCAGATTTCCCCCTTGTTCTCATGACAGTAAATGACTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667565.1 |
||
| CDS CCA 72 bp | TTGGCACTATTGACATTTGGGGCTATTTCTTTGCTGTaGGGGCTATGCTGTGTGCATTGTTGGATGCTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LALLTFGAISLL*GLCCVHCWMLS Trigger: GCTAAGCATCCAACAATGCACACAGCATAGCCCCCACAGCAAAGAAATAGCCCCAAATGTCAATAGTGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655219.1 |
||
| CDS CCA 72 bp | TTGGGCCTCATCCCAGACATGCTGAATCTGAAACTCTaGAGTAGGATGCAGAAATCTGTGTTTCAACATGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGLIPDMLNLKL*SRMQKSVFQHA Trigger: GGCATGTTGAAACACAGATTTCTGCATCCTACTCCAGAGTTTCAGATTCAGCATGTCTGGGATGAGGCCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663619.1 |
||
| CDS CCA 72 bp | GGGTCTTCATGGGCTCTCCCAGGTAATCCACATGTATaGCTCTTTCATGGATCCTTCATCTCACCCTTTATT | + |
|
Preference number: 6 (lower is better) Translates to: GSSWALPGNPHV*LFHGSFISPFI Trigger: AATAAAGGGTGAGATGAAGGATCCATGAAAGAGCCATACATGTGGATTACCTGGGAGAGCCCATGAAGACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662692.1 |
||
| CDS CCA 72 bp | GAAATGTGGTCTCCAGACATCAGCATTAGCACCATCTaGAGATGTGTAGAAATGCACATTCTTGGGCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: EMWSPDISISTI*RCVEMHILGPH Trigger: ATGAGGCCCAAGAATGTGCATTTCTACACATCTCCAGATGGTGCTAATGCTGATGTCTGGAGACCACATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663619.1 |
||
| CDS CAA 72 bp | TGCCAGCAGATTTGGTGTCTGGACAATGCCTACTTCTaGGTTCATAGATGGCCATCTTCTCACTGTAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: CQQIWCLDNAYF*VHRWPSSHCKL Trigger: GAGTTTACAGTGAGAAGATGGCCATCTATGAACCAAGAAGTAGGCATTGTCCAGACACCAAATCTGCTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655123.1 |
||
| CDS CAA 90 bp | TCCTCAGTCTGTCTCCAGGCTGTACTCACACTTCCTATTCTTTCTTaGCTCACAGTTCTGTTATCCACTTCAAGCAATTCTCCTTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSVCLQAVLTLPILS*LTVLLSTSSNSPSF Trigger: GAAGGAAGGAGAATTGCTTGAAGTGGATAACAGAACTGTGAGCAAAGAAAGAATAGGAAGTGTGAGTACAGCCTGGAGACAGACTGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663098.1 |
||
| CDS TCA 72 bp | TTCTCTGCAGTGTTAATACCTATGGCATCATTTCTGTaGACCTCTAACTGCTGGCTTTCACCTGCGACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FSAVLIPMASFL*TSNCWLSPATL Trigger: AAGAGTCGCAGGTGAAAGCCAGCAGTTAGAGGTTCACAGAAATGATGCCATAGGTATTAACACTGCAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659030.1 |
||
| CDS TCA 72 bp | AGAACTCACTCCCATAGAACCCAGATACACGTTCCCTaGTGCTTTGTAGGTGACTATCTATGGAGTATCGTT | + |
|
Preference number: 6 (lower is better) Translates to: RTHSHRTQIHVP*CFVGDYLWSIV Trigger: AACGATACTCCATAGATAGTCACCTACAAAGCATCAGGGAACGTGTATCTGGGTTCTATGGGAGTGAGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658342.1 |
||
| CDS CCA 72 bp | ATTTCTCCCAAGAACCTTTCCTTTGCATTCACAACTTaGCTGTTAGGCACAAAAGACCCAGGTTTCAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ISPKNLSFAFTT*LLGTKDPGFSS Trigger: TGAGCTGAAACCTGGGTCTTTTGTGCCTAACAGCCAAGTTGTGAATGCAAAGGAAAGGTTCTTGGGAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654946.1 ENST00000661519.1 |
||
| CDS CCA 72 bp | ATGCTGAGGAACTCTAAATCAGTGATTCTCGAAATGTaGTCTCCAGACATCAGCATTAGCACCATCTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: MLRNSKSVILEM*SPDISISTIWR Trigger: TCTCCAGATGGTGCTAATGCTGATGTCTGGAGACCACATTTCGAGAATCACTGATTTAGAGTTCCTCAGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663619.1 |
||
| CDS CAA 72 bp | AATTTCTCCCAAGAACCTTTCCTTTGCATTCACAACTaGGCTGTTAGGCACAAAAGACCCAGGTTTCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: NFSQEPFLCIHN*AVRHKRPRFQL Trigger: GAGCTGAAACCTGGGTCTTTTGTGCCTAACAGCCAAGTTGTGAATGCAAAGGAAAGGTTCTTGGGAGAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654946.1 ENST00000661519.1 |
||
| CDS CAA 90 bp | ACGATCAACCGTTTCAGCAATTCTACACAAGCATCACCAGGCCTCTaGATTCTCTGCAGTGTTAATACCTATGGCATCATTTCTGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TINRFSNSTQASPGL*ILCSVNTYGIISVN Trigger: GTTCACAGAAATGATGCCATAGGTATTAACACTGCAGAGAATCAAGAGGCCTGGTGATGCTTGTGTAGAATTGCTGAAACGGTTGATCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659030.1 |
||
| CDS CAA 90 bp | GAGATCCCCATATTAAGCTTTCTCCGAATCCTTGATTATTACAGTTaGGAAGTTTCTGTTCAGGCTACCACTCTCCCTTCTGAATTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: EIPILSFLRILDYYS*EVSVQATTLPSELP Trigger: GGGCAATTCAGAAGGGAGAGTGGTAGCCTGAACAGAAACTTCCAAACTGTAATAATCAAGGATTCGGAGAAAGCTTAATATGGGGATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662692.1 |
||
| CDS TCA 72 bp | CAAATATTTCACAGCAAGAGGCAATGGCTCTCCAACTaGAGATGCTTCTGCACTCATTTCTGTGAACCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: QIFHSKRQWLSN*RCFCTHFCEPL Trigger: TAGAGGTTCACAGAAATGAGTGCAGAAGCATCTTCAGTTGGAGAGCCATTGCCTCTTGCTGTGAAATATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 24 transcripts: ENST00000517400.6 ENST00000523283.5 ENST00000523406.2 ENST00000524361.5 ENST00000653734.1 ENST00000654785.1 ENST00000654946.1 ENST00000655123.1 ENST00000655219.1 ENST00000655523.1 ENST00000658299.1 ENST00000658342.1 ENST00000661519.1 ENST00000662145.1 ENST00000662692.1 ENST00000663098.1 ENST00000663329.1 ENST00000663619.1 ENST00000666641.1 ENST00000667296.1 ENST00000667565.1 ENST00000668745.1 ENST00000670903.1 ENST00000671657.1 |
||
| CDS TCA 72 bp | TTATTTCCCTCTCCCTTCCCAGAGGCAATCTCATCCTaGTTTATATCACCATGGATGGTTTTGCCTGTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: LFPSPFPEAISS*FISPWMVLPVL Trigger: TAGAACAGGCAAAACCATCCATGGTGATATAAATCAGGATGAGATTGCCTCTGGGAAGGGAGAGGGAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670903.1 |
||
| CDS CCA 72 bp | CTGTTTATACGGAATTATCTCGGCTATGAGTCTTCATaGAAGAATGTTTCTTTTCTCTTGGCACAGGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LFIRNYLGYESS*KNVSFLLAQGG Trigger: CCCTCCCTGTGCCAAGAGAAAAGAAACATTCTTCCATGAAGACTCATAGCCGAGATAATTCCGTATAAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000524361.5 ENST00000655523.1 ENST00000658299.1 |
||
| CDS CCA 72 bp | CTGGATAACTTACTGCAACTTCCCTATCAGCACTTATaGCCTAACCTTGCACTTTTATGTTATGGAGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: LDNLLQLPYQHL*PNLALLCYGDG Trigger: GCCATCTCCATAACATAAAAGTGCAAGGTTAGGCCATAAGTGCTGATAGGGAAGTTGCAGTAAGTTATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654946.1 ENST00000661519.1 |
||
| CDS CCA 72 bp | GATCCAACGCACCTGACTCGCTATGGGAGTTTTATATaGCTTCTTCTTCTAATACAGGATAAGGCTGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: DPTHLTRYGSFI*LLLLIQDKAVS Trigger: TGAAACAGCCTTATCCTGTATTAGAAGAAGAAGCCATATAAAACTCCCATAGCGAGTCAGGTGCGTTGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654946.1 ENST00000661519.1 |
||
| CDS CCA 72 bp | AATTTTCAAATCTGGAGCACATATCAGCTAGAGGAGTaGCAGAGACAAACAGGACTTGCATGCCTTCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: NFQIWSTYQLEE*QRQTGLACLHL Trigger: CAAATGAAGGCATGCAAGTCCTGTTTGTCTCTGCCACTCCTCTAGCTGATATGTGCTCCAGATTTGAAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663329.1 |
||
| CDS CAA 72 bp | CGTTTCAGCAATTCTACACAAGCATCACCAGGCCTCTaGATTCTCTGCAGTGTTAATACCTATGGCATCATT | + |
|
Preference number: 6 (lower is better) Translates to: RFSNSTQASPGL*ILCSVNTYGII Trigger: AATGATGCCATAGGTATTAACACTGCAGAGAATCAAGAGGCCTGGTGATGCTTGTGTAGAATTGCTGAAACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659030.1 |
||
| CDS CAA 90 bp | AGAAGCCATTGTAGGGTTATTAATTGGCCTAACTTCAATATTGCTTaGTGGAAAATAGAGATGCCTGTAGTCCTAGCTGCTTGCGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RSHCRVINWPNFNIA*WKIEMPVVLAACEA Trigger: AGCCTCGCAAGCAGCTAGGACTACAGGCATCTCTATTTTCCACAAAGCAATATTGAAGTTAGGCCAATTAATAACCCTACAATGGCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654946.1 |
||
| CDS TCA 72 bp | GAGAAGTGCCACACACTTTTAAATCAACAGATCCTGTaGGAAGTCATTTACTGTCATGAGAACAAGGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: EKCHTLLNQQIL*EVIYCHENKGE Trigger: TTCCCCCTTGTTCTCATGACAGTAAATGACTTCTCACAGGATCTGTTGATTTAAAAGTGTGTGGCACTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667565.1 |
||
| CDS CAA 72 bp | TGTCTCCAGGCTGTACTCACACTTCCTATTCTTTCTTaGCTCACAGTTCTGTTATCCACTTCAAGCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: CLQAVLTLPILS*LTVLLSTSSNS Trigger: AGAATTGCTTGAAGTGGATAACAGAACTGTGAGCAAAGAAAGAATAGGAAGTGTGAGTACAGCCTGGAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663098.1 |
||
| CDS CAA 90 bp | AATTATCTCGGCTATGAGTCTTCATGGAAGAATGTTTCTTTTCTCTaGGCACAGGGAGGGCATCTTCCACATGATAGTTTTTATCTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: NYLGYESSWKNVSFL*AQGGHLPHDSFYLL Trigger: TAGGAGATAAAAACTATCATGTGGAAGATGCCCTCCCTGTGCCAAGAGAAAAGAAACATTCTTCCATGAAGACTCATAGCCGAGATAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000524361.5 ENST00000655523.1 ENST00000658299.1 |
||
| CDS TCA 72 bp | GTTCATAGATGGCCATCTTCTCACTGTAAACTCACATaGCAGATGTCTAAGATTGAACTTGCATGCCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VHRWPSSHCKLT*QMSKIELACLH Trigger: ATGAAGGCATGCAAGTTCAATCTTAGACATCTGTCATGTGAGTTTACAGTGAGAAGATGGCCATCTATGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655123.1 |
||
| CDS TCA 72 bp | AGTGCTTTCTATTGTTTTCCTGTTAATCAAGGGTATTaGTCTGATTACAGGGTCCTGCAGACAAATGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SAFYCFPVNQGY*SDYRVLQTNAE Trigger: CTCAGCATTTGTCTGCAGGACCCTGTAATCAGATCAATACCCTTGATTAACAGGAAAACAATAGAAAGCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663619.1 |
||
| CDS TCA 72 bp | TCTGGAGATCCCCATATTAAGCTTTCTCCGAATCCTTaGTTATTACAGTTTGGAAGTTTCTGTTCAGGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: SGDPHIKLSPNP*LLQFGSFCSGY Trigger: GTAGCCTGAACAGAAACTTCCAAACTGTAATAATCAAGGATTCGGAGAAAGCTTAATATGGGGATCTCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662692.1 |
||
| CDS CCA 72 bp | AGGGTTATTAATTGGCCTAACTTCAATATTGCTTTGTaGAAAATAGAGATGCCTGTAGTCCTAGCTGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RVINWPNFNIAL*KIEMPVVLAAC Trigger: GCAAGCAGCTAGGACTACAGGCATCTCTATTTTCCACAAAGCAATATTGAAGTTAGGCCAATTAATAACCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654946.1 |
||
| CDS CCA 72 bp | TTCTTCTCATTACTCAAGGAAAACCTCACTATTTGGTaGCAGTTACGACAAGTGTATTCCCCAGAAGCTATA | + |
|
Preference number: 6 (lower is better) Translates to: FFSLLKENLTIW*QLRQVYSPEAI Trigger: TATAGCTTCTGGGGAATACACTTGTCGTAACTGCCACCAAATAGTGAGGTTTTCCTTGAGTAATGAGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662692.1 |
||
| CDS TCA 72 bp | ATGAAAAGGTCTTCAGATATCTGGTCTCACTTGAGCTaGTCTCACTTGAGCATAGGATTCATGATGTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: MKRSSDIWSHLS*SHLSIGFMMFN Trigger: ATTGAACATCATGAATCCTATGCTCAAGTGAGATCAGCTCAAGTGAGACCAGATATCTGAAGACCTTTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000524361.5 ENST00000653734.1 ENST00000655123.1 ENST00000655219.1 ENST00000658299.1 ENST00000658342.1 ENST00000662692.1 ENST00000663329.1 ENST00000667296.1 ENST00000667565.1 ENST00000668745.1 ENST00000670903.1 ENST00000671657.1 |
||
| CDS TCA 72 bp | AGCCACATTAATCTTAAAGTTTCAGCAAAGCAGATATaGCGTGCTTGGTTTCCCTCATTAAAAAGCTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SHINLKVSAKQI*RAWFPSLKSSG Trigger: TCCTGAGCTTTTTAATGAGGGAAACCAAGCACGTCATATCTGCTTTGCTGAAACTTTAAGATTAATGTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662692.1 |
||
| CDS TCA 72 bp | GCTTTAGTGATTCCACTTACTAACAGTGTAATAAACTaGAGCAAGGCTGTGATAGTGCCAATCATAAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: ALVIPLTNSVIN*SKAVIVPIIRS Trigger: GCTTCTTATGATTGGCACTATCACAGCCTTGCTTCAGTTTATTACACTGTTAGTAAGTGGAATCACTAAAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658342.1 |
||
| CDS GCA 72 bp | AATAACATTTTCAATTTCTCCCAAGAACCTTTCCTTTaGATTCACAACTTGGCTGTTAGGCACAAAAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: NNIFNFSQEPFL*IHNLAVRHKRP Trigger: GGGTCTTTTGTGCCTAACAGCCAAGTTGTGAATGCAAAGGAAAGGTTCTTGGGAGAAATTGAAAATGTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654946.1 ENST00000661519.1 |
||
| CDS GCA 72 bp | CTGTCTTCAGTCTCACTGAAGTCCCACCCTCTAGACTaGAAAATAATCTTTCCAAAGATGAAATTTCTACTA | + |
|
Preference number: 6 (lower is better) Translates to: LSSVSLKSHPLD*KIIFPKMKFLL Trigger: TAGTAGAAATTTCATCTTTGGAAAGATTATTTTGCAGTCTAGAGGGTGGGACTTCAGTGAGACTGAAGACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668720.1 |
||
| CDS GCA 72 bp | TACCTGATATACCTCACACAGCTACCTGCAAAATGCTaGAAACACAGCAGAAGCTCAATAGAGATATTAATT | + |
|
Preference number: 6 (lower is better) Translates to: YLIYLTQLPAKC*KHSRSSIEILI Trigger: AATTAATATCTCTATTGAGCTTCTGCTGTGTTTGCAGCATTTTGCAGGTAGCTGTGTGAGGTATATCAGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668720.1 |
||
| CDS CCA 72 bp | AATATTACATACCGACTTCAATGTAATAGCTACCTCTaGAGAGAAGAGGAAGGGATTGATAGATGGGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: NITYRLQCNSYL*REEEGIDRWGF Trigger: AAAACCCCATCTATCAATCCCTTCCTCTTCTCTCCAGAGGTAGCTATTACATTGAAGTCGGTATGTAATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000517400.6 ENST00000523406.2 ENST00000659030.1 ENST00000662145.1 |
||
| CDS CAA 72 bp | AAAAATCAGTTTCTAGTTGGTTCAGCTCCTTCACACTaGGCCTTTCTGATATCCATGGCACAGATTATGATA | + |
|
Preference number: 6 (lower is better) Translates to: KNQFLVGSAPSH*AFLISMAQIMI Trigger: TATCATAATCTGTGCCATGGATATCAGAAAGGCCAAGTGTGAAGGAGCTGAACCAACTAGAAACTGATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653734.1 |
||
| CDS CAA 72 bp | ATATTAAGCTTTCTCCGAATCCTTGATTATTACAGTTaGGAAGTTTCTGTTCAGGCTACCACTCTCCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ILSFLRILDYYS*EVSVQATTLPS Trigger: AGAAGGGAGAGTGGTAGCCTGAACAGAAACTTCCAAACTGTAATAATCAAGGATTCGGAGAAAGCTTAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662692.1 |
||
| CDS CAA 90 bp | CTACAACTTAAAAATCAGTTTCTAGTTGGTTCAGCTCCTTCACACTaGGCCTTTCTGATATCCATGGCACAGATTATGATAACTGTTACT | + |
|
Preference number: 6 (lower is better) Translates to: LQLKNQFLVGSAPSH*AFLISMAQIMITVT Trigger: AGTAACAGTTATCATAATCTGTGCCATGGATATCAGAAAGGCCAAGTGTGAAGGAGCTGAACCAACTAGAAACTGATTTTTAAGTTGTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653734.1 |
||
| CDS TCA 72 bp | GTGAAATCTCTTAAGATTTTTACCTCTTTACTCCAGTaGCTTATCAATGCAAATAGGCCTCTGTCCATCAAC | + |
|
Preference number: 6 (lower is better) Translates to: VKSLKIFTSLLQ*LINANRPLSIN Trigger: GTTGATGGACAGAGGCCTATTTGCATTGATAAGTCACTGGAGTAAAGAGGTAAAAATCTTAAGAGATTTCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653734.1 |
||
| CDS TCA 72 bp | CAAGGAAGTTGTTTCTGTAGCAATGAATCAGCCACGTaGAATCTCTTAAGATTTTTACCTCTTTACTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QGSCFCSNESAT*NLLRFLPLYSS Trigger: ACTGGAGTAAAGAGGTAAAAATCTTAAGAGATTTCACGTGGCTGATTCATTGCTACAGAAACAACTTCCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653734.1 |
||
| CDS TCA 72 bp | CAACATCTATTAGAATGCCTGCCCAGTAAAAATTGTTaGACAAATGAATTACGCACTGGAGGACATACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QHLLECLPSKNC*TNELRTGGHTE Trigger: TTCAGTATGTCCTCCAGTGCGTAATTCATTTGTTCAACAATTTTTACTGGGCAGGCATTCTAATAGATGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658299.1 |
||
| CDS TCA 72 bp | AACCCTGTAAAACTATCCTTTGCGGGCTTTGTGTACTaGATTGAGGTAGTGAATGCATTTTTCTTCTCATTA | + |
|
Preference number: 6 (lower is better) Translates to: NPVKLSFAGFVY*IEVVNAFFFSL Trigger: TAATGAGAAGAAAAATGCATTCACTACCTCAATTCAGTACACAAAGCCCGCAAAGGATAGTTTTACAGGGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662692.1 |
||
| CDS TCA 72 bp | ATTGTGTTATATTTTATTGTGTTACTCTCTGGGTTATaGCCTTTCAAGTCGATTATTTCCCTCTCCCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: IVLYFIVLLSGL*PFKSIISLSLP Trigger: GGGAAGGGAGAGGGAAATAATCGACTTGAAAGGTCATAACCCAGAGAGTAACACAATAAAATATAACACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670903.1 |
||
| CDS CAA 90 bp | AGAAGCCATTGTAGGGTTATTAATTGGCCTAACTTCAATATTGCTTaGTGGAAAATAGAGATGCCTTTAGCAGGTTATTCTTCATGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: RSHCRVINWPNFNIA*WKIEMPLAGYSSWF Trigger: AAACCATGAAGAATAACCTGCTAAAGGCATCTCTATTTTCCACAAAGCAATATTGAAGTTAGGCCAATTAATAACCCTACAATGGCTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661519.1 |
||
| CDS CCA 72 bp | CCTCAAACACTTAGAAGCCATTGTAGGGTTATTAATTaGCCTAACTTCAATATTGCTTTGTGGAAAATAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PQTLRSHCRVIN*PNFNIALWKIE Trigger: CTCTATTTTCCACAAAGCAATATTGAAGTTAGGCCAATTAATAACCCTACAATGGCTTCTAAGTGTTTGAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654946.1 ENST00000661519.1 |
||
| CDS TCA 72 bp | CGTAGTAACATCTTAACATCTCTTAAATCTGGATGCTaGGACCATGGTGTCTATTATATTATTTTTGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RSNILTSLKSGC*DHGVYYIIFVP Trigger: AGGCACAAAAATAATATAATAGACACCATGGTCTCAGCATCCAGATTTAAGAGATGTTAAGATGTTACTACG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000517400.6 ENST00000523406.2 ENST00000659030.1 ENST00000662145.1 |
||
| CDS TCA 72 bp | ACAGTTATTTATCTATTTCCCCAATTTATGAAGCTTTaGCACATGACAGTCACTTTACACCATGTAATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TVIYLFPQFMKL*HMTVTLHHVIL Trigger: GAGGATTACATGGTGTAAAGTGACTGTCATGTGTCAAAGCTTCATAAATTGGGGAAATAGATAAATAACTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665280.1 |
||
| CDS TCA 72 bp | TACAGTCTGAATTTAGTGAGTTCCCATAATATCTATTaGTACCGTCTCTCAATTTCTGCATTACAGCATCTA | + |
|
Preference number: 6 (lower is better) Translates to: YSLNLVSSHNIY*YRLSISALQHL Trigger: TAGATGCTGTAATGCAGAAATTGAGAGACGGTATCAATAGATATTATGGGAACTCACTAAATTCAGACTGTA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000668745.1 ENST00000671657.1 |
||
| CDS CCA 72 bp | AGGGTTATTAATTGGCCTAACTTCAATATTGCTTTGTaGAAAATAGAGATGCCTTTAGCAGGTTATTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RVINWPNFNIAL*KIEMPLAGYSS Trigger: TGAAGAATAACCTGCTAAAGGCATCTCTATTTTCCACAAAGCAATATTGAAGTTAGGCCAATTAATAACCCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661519.1 |
||
| CDS CAA 72 bp | CACGTGGACTTTCTCCATATCAGAAATAAGGTTGTTTaGCTCTCATTCTTATCATTTGTGAACACACAAATA | + |
|
Preference number: 6 (lower is better) Translates to: HVDFLHIRNKVV*LSFLSFVNTQI Trigger: TATTTGTGTGTTCACAAATGATAAGAATGAGAGCAAAACAACCTTATTTCTGATATGGAGAAAGTCCACGTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654946.1 ENST00000661519.1 |
||
| CDS CAA 72 bp | TGTAGGGTTATTAATTGGCCTAACTTCAATATTGCTTaGTGGAAAATAGAGATGCCTTTAGCAGGTTATTCT | + |
|
Preference number: 6 (lower is better) Translates to: CRVINWPNFNIA*WKIEMPLAGYS Trigger: AGAATAACCTGCTAAAGGCATCTCTATTTTCCACAAAGCAATATTGAAGTTAGGCCAATTAATAACCCTACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661519.1 |
||