Pregenerated sensors for LINC00529 (Homo sapiens)

Ensembl gene IDs: ENSG00000236827

Ensembl transcript IDs: ENST00000443854.1, ENST00000645616.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TTAATAATTTTAATATATCTGGAAGTTAATTCAGAGAACTCCATGTaGTACAGAAGCGTCTTCCTAGTGGACTCAGCCACATACATTTTG	+
Preference number: 5 (lower is better) Translates to: LIILIYLEVNSENSM*YRSVFLVDSATYIL Trigger: CAAAATGTATGTGGCTGAGTCCACTAGGAAGACGCTTCTGTACCACATGGAGTTCTCTGAATTAACTTCCAGATATATTAAAATTATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000443854.1 ENST00000645616.1
CDS CAA 72 bp	AGCGTCTTCCTAGTGGACTCAGCCACATACATTTTGTaGTTATCTGTTCACACACAGCGCCAGCCCGGAGTT	+
Preference number: 6 (lower is better) Translates to: SVFLVDSATYIL*LSVHTQRQPGV Trigger: AACTCCGGGCTGGCGCTGTGTGTGAACAGATAACAACAAAATGTATGTGGCTGAGTCCACTAGGAAGACGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000443854.1 ENST00000645616.1
CDS CCA 72 bp	TTAATATATCTGGAAGTTAATTCAGAGAACTCCATGTaGTACAGAAGCGTCTTCCTAGTGGACTCAGCCACA	+
Preference number: 6 (lower is better) Translates to: LIYLEVNSENSM*YRSVFLVDSAT Trigger: TGTGGCTGAGTCCACTAGGAAGACGCTTCTGTACCACATGGAGTTCTCTGAATTAACTTCCAGATATATTAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000443854.1 ENST00000645616.1

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