Pregenerated sensors for LINC00528 (Homo sapiens)
Ensembl gene IDs: ENSG00000269220Ensembl transcript IDs: ENST00000600723.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGTGGCTCAGAGCAGAAGGTGGGGATGCAGTTCTGGGGGCGCCATaGCCGAGCACCACAGACCCGGGACTTGCACAACAGAAGCGGGTT | + |
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Preference number: 5 (lower is better) Translates to: GWLRAEGGDAVLGAP*PSTTDPGLAQQKRV Trigger: AACCCGCTTCTGTTGTGCAAGTCCCGGGTCTGTGGTGCTCGGCCATGGCGCCCCCAGAACTGCATCCCCACCTTCTGCTCTGAGCCACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS GCA 90 bp | CCTGCCCAGTGTTGGTGGGGATGGAGCAGGGCGGCCTGCAAGCCCTaGTGTGGGATTAAAGTGTACCACTGGGGAGACCTCACCACAGGC | + |
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Preference number: 5 (lower is better) Translates to: PAQCWWGWSRAACKP*CGIKVYHWGDLTTG Trigger: GCCTGTGGTGAGGTCTCCCCAGTGGTACACTTTAATCCCACAGCAGGGCTTGCAGGCCGCCCTGCTCCATCCCCACCAACACTGGGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 90 bp | CCATGGTTTGGGAGGCAGTTGGGCAAAATGCAGGGCTGCCCACAGTaGGGACCCCATGGCACTGGAGGCACACGCGCAGCAATGTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: PWFGRQLGKMQGCPQ*GPHGTGGTRAAMWR Trigger: CCTCCACATTGCTGCGCGTGTGCCTCCAGTGCCATGGGGTCCCCACTGTGGGCAGCCCTGCATTTTGCCCAACTGCCTCCCAAACCATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS GCA 90 bp | CCATCCTTATGCGAGAGTCCCTCAGGTGTGTGGCAACCTCAGCTCTaGACACCCAGCCTTGGACACCCACAGCGCAAACAGGGACCCTCC | + |
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Preference number: 5 (lower is better) Translates to: PSLCESPSGVWQPQL*TPSLGHPQRKQGPS Trigger: GGAGGGTCCCTGTTTGCGCTGTGGGTGTCCAAGGCTGGGTGTGCAGAGCTGAGGTTGCCACACACCTGAGGGACTCTCGCATAAGGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS GCA 90 bp | CCGGCAGCGCTGTCTCATTCACTGTCTCAGTCCAGCTTCCAGCCCTaGGCCATCCTTATGCGAGAGTCCCTCAGGTGTGTGGCAACCTCA | + |
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Preference number: 5 (lower is better) Translates to: PAALSHSLSQSSFQP*AILMRESLRCVATS Trigger: TGAGGTTGCCACACACCTGAGGGACTCTCGCATAAGGATGGCGCAGGGCTGGAAGCTGGACTGAGACAGTGAATGAGACAGCGCTGCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 90 bp | AGAGTGGCTCGTCATGGCGGCAAGTTGGAGGTCACTGGGGTTCCATaGTTTGGGAGGCAGTTGGGCAAAATGCAGGGCTGCCCACAGTGG | + |
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Preference number: 5 (lower is better) Translates to: RVARHGGKLEVTGVP*FGRQLGKMQGCPQW Trigger: CCACTGTGGGCAGCCCTGCATTTTGCCCAACTGCCTCCCAAACCATGGAACCCCAGTGACCTCCAACTTGCCGCCATGACGAGCCACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS TCA 90 bp | ATCTCAGTTAAAACACACGTGCACGAGCAACAGCACACTTGCTCGTaGGACTGCCTAGGAGCCAGTCCACGGCGCGGAGAGAGCCGGCAG | + |
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Preference number: 5 (lower is better) Translates to: ISVKTHVHEQQHTCS*DCLGASPRRGESRQ Trigger: CTGCCGGCTCTCTCCGCGCCGTGGACTGGCTCCTAGGCAGTCTCACGAGCAAGTGTGCTGTTGCTCGTGCACGTGTGTTTTAACTGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS GCA 90 bp | CTCATTCACTGTCTCAGTCCAGCTTCCAGCCCTGCGCCATCCTTATaGGAGAGTCCCTCAGGTGTGTGGCAACCTCAGCTCTGCACACCC | + |
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Preference number: 5 (lower is better) Translates to: LIHCLSPASSPAPSL*ESPSGVWQPQLCTP Trigger: GGGTGTGCAGAGCTGAGGTTGCCACACACCTGAGGGACTCTCGCATAAGGATGGCGCAGGGCTGGAAGCTGGACTGAGACAGTGAATGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 90 bp | TGGCACTGGAGGCACACGCGCAGCAATGTGGAGGGACCCAGCAGATaGAGCCGGGTGGAGAAAACGCGCCAGCTCACATCTCAGTTAAAA | + |
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Preference number: 5 (lower is better) Translates to: WHWRHTRSNVEGPSR*SRVEKTRQLTSQLK Trigger: TTTTAACTGAGATGTGAGCTGGCGCGTTTTCTCCACCCGGCTCCATCTGCTGGGTCCCTCCACATTGCTGCGCGTGTGCCTCCAGTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 90 bp | AGTTTGGAGGGATCCAACACAGCTCCCCTGAAGTTGGCTGTGACTTaGGCCTGTCAGAAGCAGCCTGAGAGGAGGGTCGCAAGTGACCCA | + |
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Preference number: 5 (lower is better) Translates to: SLEGSNTAPLKLAVT*ACQKQPERRVASDP Trigger: TGGGTCACTTGCGACCCTCCTCTCAGGCTGCTTCTGACAGGCCCAAGTCACAGCCAACTTCAGGGGAGCTGTGTTGGATCCCTCCAAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 90 bp | ACTATTAGACTGGCAAAGGTTTGGAGGCTAGATCCTGCCCAGTGTTaGTGGGGATGGAGCAGGGCGGCCTGCAAGCCCTGCTGTGGGATT | + |
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Preference number: 5 (lower is better) Translates to: TIRLAKVWRLDPAQC*WGWSRAACKPCCGI Trigger: AATCCCACAGCAGGGCTTGCAGGCCGCCCTGCTCCATCCCCACCAACACTGGGCAGGATCTAGCCTCCAAACCTTTGCCAGTCTAATAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 90 bp | ATTAGACTGGCAAAGGTTTGGAGGCTAGATCCTGCCCAGTGTTGGTaGGGATGGAGCAGGGCGGCCTGCAAGCCCTGCTGTGGGATTAAA | + |
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Preference number: 5 (lower is better) Translates to: IRLAKVWRLDPAQCW*GWSRAACKPCCGIK Trigger: TTTAATCCCACAGCAGGGCTTGCAGGCCGCCCTGCTCCATCCCCACCAACACTGGGCAGGATCTAGCCTCCAAACCTTTGCCAGTCTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS TCA 90 bp | GCGTCCCCATCAGGACACCAGTCAGATAGGAGGAGGGCCATCCAGTaGCCTCACTTCACCTTAATCACCTCTGGAAAGTCCCTGTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: ASPSGHQSDRRRAIQ*PHFTLITSGKSLCP Trigger: TGGACACAGGGACTTTCCAGAGGTGATTAAGGTGAAGTGAGGTCACTGGATGGCCCTCCTCCTATCTGACTGGTGTCCTGATGGGGACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 90 bp | GATATGAATGAGAGTGGCTCGTCATGGCGGCAAGTTGGAGGTCACTaGGGTTCCATGGTTTGGGAGGCAGTTGGGCAAAATGCAGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: DMNESGSSWRQVGGH*GSMVWEAVGQNAGL Trigger: CAGCCCTGCATTTTGCCCAACTGCCTCCCAAACCATGGAACCCCAGTGACCTCCAACTTGCCGCCATGACGAGCCACTCTCATTCATATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 90 bp | CCTCACCACAGGCCCACCTTAGACGGGAGCTCTGTCCCTACAGTTTaGTCCCCAGATATCTCTCTAAAGAAACCCTCATTCGGGCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: PHHRPTLDGSSVPTV*SPDISLKKPSFGLR Trigger: TCTGAGCCCGAATGAGGGTTTCTTTAGAGAGATATCTGGGGACCAAACTGTAGGGACAGAGCTCCCGTCTAAGGTGGGCCTGTGGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS TCA 90 bp | CTAAAGAAACCCTCATTCGGGCTCAGAGCACCGTGTTTGAGGATATaGATGAGAGTGGCTCGTCATGGCGGCAAGTTGGAGGTCACTGGG | + |
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Preference number: 5 (lower is better) Translates to: LKKPSFGLRAPCLRI*MRVARHGGKLEVTG Trigger: CCCAGTGACCTCCAACTTGCCGCCATGACGAGCCACTCTCATTCATATCCTCAAACACGGTGCTCTGAGCCCGAATGAGGGTTTCTTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 90 bp | CTCTGGAAAGTCCCTGTGTCCAAGCACAGTCACGTTCTGAGGTCCTaGGGGTCAGGGCTTCAACTTACGAATTTTGAGAGCATTCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: LWKVPVSKHSHVLRS*GSGLQLTNFESIQV Trigger: GACTTGAATGCTCTCAAAATTCGTAAGTTGAAGCCCTGACCCCCAGGACCTCAGAACGTGACTGTGCTTGGACACAGGGACTTTCCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 90 bp | AGAGATGAACATCTCACTGAATTGCCCGGGCTGGTCTTGAACTCCTaGTGGCCCAGTCTGGTCTCGAACTCCCAAAGGACTTTTGAACAA | + |
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Preference number: 5 (lower is better) Translates to: RDEHLTELPGLVLNS*WPSLVSNSQRTFEQ Trigger: TTGTTCAAAAGTCCTTTGGGAGTTCGAGACCAGACTGGGCCACCAGGAGTTCAAGACCAGCCCGGGCAATTCAGTGAGATGTTCATCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 90 bp | GATGAACATCTCACTGAATTGCCCGGGCTGGTCTTGAACTCCTGGTaGCCCAGTCTGGTCTCGAACTCCCAAAGGACTTTTGAACAAAAA | + |
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Preference number: 5 (lower is better) Translates to: DEHLTELPGLVLNSW*PSLVSNSQRTFEQK Trigger: TTTTTGTTCAAAAGTCCTTTGGGAGTTCGAGACCAGACTGGGCCACCAGGAGTTCAAGACCAGCCCGGGCAATTCAGTGAGATGTTCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS TCA 90 bp | GAACTCCTGGTGGCCCAGTCTGGTCTCGAACTCCCAAAGGACTTTTaGACAAAAACTCTCAAACTCATTGTTCACCATGGAAATGCAAAA | + |
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Preference number: 5 (lower is better) Translates to: ELLVAQSGLELPKDF*TKTLKLIVHHGNAK Trigger: TTTTGCATTTCCATGGTGAACAATGAGTTTGAGAGTTTTTGTTCAAAAGTCCTTTGGGAGTTCGAGACCAGACTGGGCCACCAGGAGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 72 bp | GGGAGGCAGTTGGGCAAAATGCAGGGCTGCCCACAGTaGGGACCCCATGGCACTGGAGGCACACGCGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: GRQLGKMQGCPQ*GPHGTGGTRAA Trigger: TGCTGCGCGTGTGCCTCCAGTGCCATGGGGTCCCCACTGTGGGCAGCCCTGCATTTTGCCCAACTGCCTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 72 bp | AGAGCAGAAGGTGGGGATGCAGTTCTGGGGGCGCCATaGCCGAGCACCACAGACCCGGGACTTGCACAACAG | + |
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Preference number: 6 (lower is better) Translates to: RAEGGDAVLGAP*PSTTDPGLAQQ Trigger: CTGTTGTGCAAGTCCCGGGTCTGTGGTGCTCGGCCATGGCGCCCCCAGAACTGCATCCCCACCTTCTGCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 72 bp | GGACCCCATGGCACTGGAGGCACACGCGCAGCAATGTaGAGGGACCCAGCAGATGGAGCCGGGTGGAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: GPHGTGGTRAAM*RDPADGAGWRK Trigger: TTTTCTCCACCCGGCTCCATCTGCTGGGTCCCTCCACATTGCTGCGCGTGTGCCTCCAGTGCCATGGGGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 72 bp | CTGGCAAAGGTTTGGAGGCTAGATCCTGCCCAGTGTTaGTGGGGATGGAGCAGGGCGGCCTGCAAGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LAKVWRLDPAQC*WGWSRAACKPC Trigger: GCAGGGCTTGCAGGCCGCCCTGCTCCATCCCCACCAACACTGGGCAGGATCTAGCCTCCAAACCTTTGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 72 bp | AGGCACACGCGCAGCAATGTGGAGGGACCCAGCAGATaGAGCCGGGTGGAGAAAACGCGCCAGCTCACATCT | + |
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Preference number: 6 (lower is better) Translates to: RHTRSNVEGPSR*SRVEKTRQLTS Trigger: AGATGTGAGCTGGCGCGTTTTCTCCACCCGGCTCCATCTGCTGGGTCCCTCCACATTGCTGCGCGTGTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 72 bp | GCAAAGGTTTGGAGGCTAGATCCTGCCCAGTGTTGGTaGGGATGGAGCAGGGCGGCCTGCAAGCCCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: AKVWRLDPAQCW*GWSRAACKPCC Trigger: ACAGCAGGGCTTGCAGGCCGCCCTGCTCCATCCCCACCAACACTGGGCAGGATCTAGCCTCCAAACCTTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CAA 72 bp | ACTGGCAAAGGTTTGGAGGCTAGATCCTGCCCAGTGTaGGTGGGGATGGAGCAGGGCGGCCTGCAAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: TGKGLEARSCPV*VGMEQGGLQAL Trigger: CAGGGCTTGCAGGCCGCCCTGCTCCATCCCCACCAACACTGGGCAGGATCTAGCCTCCAAACCTTTGCCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS GCA 72 bp | TGCGAGAGTCCCTCAGGTGTGTGGCAACCTCAGCTCTaGACACCCAGCCTTGGACACCCACAGCGCAAACAG | + |
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Preference number: 6 (lower is better) Translates to: CESPSGVWQPQL*TPSLGHPQRKQ Trigger: CTGTTTGCGCTGTGGGTGTCCAAGGCTGGGTGTGCAGAGCTGAGGTTGCCACACACCTGAGGGACTCTCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 72 bp | GGTGACGCCTCCCGAGACCGGGAGAGGAAGGCCACCTaGCGAAGCTGCAGTCCCAGCATTATCTGTATGTTA | + |
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Preference number: 6 (lower is better) Translates to: GDASRDRERKAT*RSCSPSIICML Trigger: TAACATACAGATAATGCTGGGACTGCAGCTTCGCCAGGTGGCCTTCCTCTCCCGGTCTCGGGAGGCGTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 72 bp | GGATCCAACACAGCTCCCCTGAAGTTGGCTGTGACTTaGGCCTGTCAGAAGCAGCCTGAGAGGAGGGTCGCA | + |
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Preference number: 6 (lower is better) Translates to: GSNTAPLKLAVT*ACQKQPERRVA Trigger: TGCGACCCTCCTCTCAGGCTGCTTCTGACAGGCCCAAGTCACAGCCAACTTCAGGGGAGCTGTGTTGGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 72 bp | CGTCATGGCGGCAAGTTGGAGGTCACTGGGGTTCCATaGTTTGGGAGGCAGTTGGGCAAAATGCAGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RHGGKLEVTGVP*FGRQLGKMQGC Trigger: GCAGCCCTGCATTTTGCCCAACTGCCTCCCAAACCATGGAACCCCAGTGACCTCCAACTTGCCGCCATGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CAA 72 bp | ATGGCGGCAAGTTGGAGGTCACTGGGGTTCCATGGTTaGGGAGGCAGTTGGGCAAAATGCAGGGCTGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: MAASWRSLGFHG*GGSWAKCRAAH Trigger: GTGGGCAGCCCTGCATTTTGCCCAACTGCCTCCCAAACCATGGAACCCCAGTGACCTCCAACTTGCCGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CAA 72 bp | CGGAGTTTGGAGGGATCCAACACAGCTCCCCTGAAGTaGGCTGTGACTTGGGCCTGTCAGAAGCAGCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RSLEGSNTAPLK*AVTWACQKQPE Trigger: CTCAGGCTGCTTCTGACAGGCCCAAGTCACAGCCAACTTCAGGGGAGCTGTGTTGGATCCCTCCAAACTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS TCA 72 bp | GAGATGAACATCTCACTGAATTGCCCGGGCTGGTCTTaGACTCCTGGTGGCCCAGTCTGGTCTCGAACTCCC | + |
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Preference number: 6 (lower is better) Translates to: EMNISLNCPGWS*TPGGPVWSRTP Trigger: GGGAGTTCGAGACCAGACTGGGCCACCAGGAGTTCAAGACCAGCCCGGGCAATTCAGTGAGATGTTCATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 72 bp | CATCTCACTGAATTGCCCGGGCTGGTCTTGAACTCCTaGTGGCCCAGTCTGGTCTCGAACTCCCAAAGGACT | + |
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Preference number: 6 (lower is better) Translates to: HLTELPGLVLNS*WPSLVSNSQRT Trigger: AGTCCTTTGGGAGTTCGAGACCAGACTGGGCCACCAGGAGTTCAAGACCAGCCCGGGCAATTCAGTGAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS TCA 72 bp | CCCTCATTCGGGCTCAGAGCACCGTGTTTGAGGATATaGATGAGAGTGGCTCGTCATGGCGGCAAGTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: PSFGLRAPCLRI*MRVARHGGKLE Trigger: CTCCAACTTGCCGCCATGACGAGCCACTCTCATTCATATCCTCAAACACGGTGCTCTGAGCCCGAATGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 72 bp | CTCACTGAATTGCCCGGGCTGGTCTTGAACTCCTGGTaGCCCAGTCTGGTCTCGAACTCCCAAAGGACTTTT | + |
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Preference number: 6 (lower is better) Translates to: LTELPGLVLNSW*PSLVSNSQRTF Trigger: AAAAGTCCTTTGGGAGTTCGAGACCAGACTGGGCCACCAGGAGTTCAAGACCAGCCCGGGCAATTCAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CAA 72 bp | AGAGATGAACATCTCACTGAATTGCCCGGGCTGGTCTaGAACTCCTGGTGGCCCAGTCTGGTCTCGAACTCC | + |
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Preference number: 6 (lower is better) Translates to: RDEHLTELPGLV*NSWWPSLVSNS Trigger: GGAGTTCGAGACCAGACTGGGCCACCAGGAGTTCAAGACCAGCCCGGGCAATTCAGTGAGATGTTCATCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CAA 90 bp | ACCTCACCACAGGCCCACCTTAGACGGGAGCTCTGTCCCTACAGTTaGGTCCCCAGATATCTCTCTAAAGAAACCCTCATTCGGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: TSPQAHLRRELCPYS*VPRYLSKETLIRAQ Trigger: CTGAGCCCGAATGAGGGTTTCTTTAGAGAGATATCTGGGGACCAAACTGTAGGGACAGAGCTCCCGTCTAAGGTGGGCCTGTGGTGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 72 bp | GTCCCTGTGTCCAAGCACAGTCACGTTCTGAGGTCCTaGGGGTCAGGGCTTCAACTTACGAATTTTGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: VPVSKHSHVLRS*GSGLQLTNFES Trigger: GCTCTCAAAATTCGTAAGTTGAAGCCCTGACCCCCAGGACCTCAGAACGTGACTGTGCTTGGACACAGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS TCA 72 bp | TCAGGACACCAGTCAGATAGGAGGAGGGCCATCCAGTaGCCTCACTTCACCTTAATCACCTCTGGAAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SGHQSDRRRAIQ*PHFTLITSGKS Trigger: GGACTTTCCAGAGGTGATTAAGGTGAAGTGAGGTCACTGGATGGCCCTCCTCCTATCTGACTGGTGTCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS GCA 72 bp | AAAACGCGCCAGCTCACATCTCAGTTAAAACACACGTaGACGAGCAACAGCACACTTGCTCGTGAGACTGCC | + |
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Preference number: 6 (lower is better) Translates to: KTRQLTSQLKHT*TSNSTLARETA Trigger: GGCAGTCTCACGAGCAAGTGTGCTGTTGCTCGTGCACGTGTGTTTTAACTGAGATGTGAGCTGGCGCGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 72 bp | GGCCATCCAGTGACCTCACTTCACCTTAATCACCTCTaGAAAGTCCCTGTGTCCAAGCACAGTCACGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: GHPVTSLHLNHL*KVPVSKHSHVL Trigger: CAGAACGTGACTGTGCTTGGACACAGGGACTTTCCAGAGGTGATTAAGGTGAAGTGAGGTCACTGGATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 72 bp | ACCGTGTTTGAGGATATGAATGAGAGTGGCTCGTCATaGCGGCAAGTTGGAGGTCACTGGGGTTCCATGGTT | + |
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Preference number: 6 (lower is better) Translates to: TVFEDMNESGSS*RQVGGHWGSMV Trigger: AACCATGGAACCCCAGTGACCTCCAACTTGCCGCCATGACGAGCCACTCTCATTCATATCCTCAAACACGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS TCA 72 bp | GAGGTCCTGGGGGTCAGGGCTTCAACTTACGAATTTTaGGAGCATTCAAGTCAGCCCACAACAGTGGACTCT | + |
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Preference number: 6 (lower is better) Translates to: EVLGVRASTYEF*EHSSQPTTVDS Trigger: AGAGTCCACTGTTGTGGGCTGACTTGAATGCTCTCAAAATTCGTAAGTTGAAGCCCTGACCCCCAGGACCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CCA 72 bp | AGGCCCACCTTAGACGGGAGCTCTGTCCCTACAGTTTaGTCCCCAGATATCTCTCTAAAGAAACCCTCATTC | + |
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Preference number: 6 (lower is better) Translates to: RPTLDGSSVPTV*SPDISLKKPSF Trigger: GAATGAGGGTTTCTTTAGAGAGATATCTGGGGACCAAACTGTAGGGACAGAGCTCCCGTCTAAGGTGGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CAA 72 bp | CAGGCCCACCTTAGACGGGAGCTCTGTCCCTACAGTTaGGTCCCCAGATATCTCTCTAAAGAAACCCTCATT | + |
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Preference number: 6 (lower is better) Translates to: QAHLRRELCPYS*VPRYLSKETLI Trigger: AATGAGGGTTTCTTTAGAGAGATATCTGGGGACCAAACTGTAGGGACAGAGCTCCCGTCTAAGGTGGGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS CAA 72 bp | GGTGGCCCAGTCTGGTCTCGAACTCCCAAAGGACTTTaGAACAAAAACTCTCAAACTCATTGTTCACCATGG | + |
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Preference number: 6 (lower is better) Translates to: GGPVWSRTPKGL*NKNSQTHCSPW Trigger: CCATGGTGAACAATGAGTTTGAGAGTTTTTGTTCAAAAGTCCTTTGGGAGTTCGAGACCAGACTGGGCCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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| CDS TCA 72 bp | GTGGCCCAGTCTGGTCTCGAACTCCCAAAGGACTTTTaGACAAAAACTCTCAAACTCATTGTTCACCATGGA | + |
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Preference number: 6 (lower is better) Translates to: VAQSGLELPKDF*TKTLKLIVHHG Trigger: TCCATGGTGAACAATGAGTTTGAGAGTTTTTGTTCAAAAGTCCTTTGGGAGTTCGAGACCAGACTGGGCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600723.1 |
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