Pregenerated sensors for LINC00506 (Homo sapiens)
Ensembl gene IDs: ENSG00000281392Ensembl transcript IDs: ENST00000628435.1, ENST00000629052.1, ENST00000629295.1, ENST00000630120.2, ENST00000656042.1
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCAGGAGGTATCCTCAGCGAGGCCTGATGGAGGACAGGAGGGGCTaGCCGAGGGTGGAGAGCGAAGGGATCGCCGGAGCGGAGCGAGGG | + |
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Preference number: 5 (lower is better) Translates to: PRRYPQRGLMEDRRG*PRVESEGIAGAERG Trigger: CCCTCGCTCCGCTCCGGCGATCCCTTCGCTCTCCACCCTCGGCCAGCCCCTCCTGTCCTCCATCAGGCCTCGCTGAGGATACCTCCTGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000628435.1 ENST00000629052.1 ENST00000629295.1 ENST00000630120.2 ENST00000656042.1 |
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| CDS TCA 90 bp | GGTGGCAGCAAGGCTGGGGGAGGGGCGCCCGCTATTGCCGAGGCTTaGGTAGGTAAACAAAGCGGCCGAGAAGCTCGAACTGGGTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: GGSKAGGGAPAIAEA*VGKQSGREARTGWS Trigger: GCTCCACCCAGTTCGAGCTTCTCGGCCGCTTTGTTTACCTACTCAAGCCTCGGCAATAGCGGGCGCCCCTCCCCCAGCCTTGCTGCCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS TCA 90 bp | GTTCAACTCGCGCTTTGGAACCCAGGAGGTATCCTCAGCGAGGCCTaGTGGAGGACAGGAGGGGCTGGCCGAGGGTGGAGAGCGAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: VQLALWNPGGILSEA*WRTGGAGRGWRAKG Trigger: TCCCTTCGCTCTCCACCCTCGGCCAGCCCCTCCTGTCCTCCATCAGGCCTCGCTGAGGATACCTCCTGGGTTCCAAAGCGCGAGTTGAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000628435.1 ENST00000629052.1 ENST00000629295.1 ENST00000630120.2 ENST00000656042.1 |
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| CDS GCA 90 bp | CTCACTGGGGAGTGTCAGACAGTGGGTGCAGGACAGTGGGTGCAGTaGACCGAGTGTGAGCCAAAGCAGGGTGAGGCATCACCTCACCTG | + |
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Preference number: 5 (lower is better) Translates to: LTGECQTVGAGQWVQ*TECEPKQGEASPHL Trigger: CAGGTGAGGTGATGCCTCACCCTGCTTTGGCTCACACTCGGTGCACTGCACCCACTGTCCTGCACCCACTGTCTGACACTCCCCAGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 90 bp | CCTGATGGAGCTGAACCCCTTGGGTGGGGAAGGGAAAGGCTGCAGTaGCTTCTGGATGGGAACCAGCCACCCGGCTGTGTGAGACTCTTG | + |
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Preference number: 5 (lower is better) Translates to: PDGAEPLGWGRERLQ*LLDGNQPPGCVRLL Trigger: CAAGAGTCTCACACAGCCGGGTGGCTGGTTCCCATCCAGAAGCCACTGCAGCCTTTCCCTTCCCCACCCAAGGGGTTCAGCTCCATCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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| CDS TCA 90 bp | CTCACTAGGCCAGCGTCCCTGCTACAGTGCTTCCAGCCTGTAGCTTaGATGCCAGATTCCACACAGGAAGAGGAGGGGCCAGGCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LTRPASLLQCFQPVA*MPDSTQEEEGPGSS Trigger: GGAGGAGCCTGGCCCCTCCTCTTCCTGTGTGGAATCTGGCATTCAAGCTACAGGCTGGAAGCACTGTAGCAGGGACGCTGGCCTAGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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| CDS GCA 90 bp | ATAAGAATGACTTCCGCCGCGGAGATCCAGCGCTTCCTTCCATTTTaGCTCCTGGCCCCTCCTGGAGACCGCAGCCGGTTTCTTGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: IRMTSAAEIQRFLPF*LLAPPGDRSRFLGS Trigger: GCTGCCAAGAAACCGGCTGCGGTCTCCAGGAGGGGCCAGGAGGCAAAATGGAAGGAAGCGCTGGATCTCCGCGGCGGAAGTCATTCTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629052.1 |
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| CDS GCA 90 bp | TTCATCTCACTGGGGAGTGTCAGACAGTGGGTGCAGGACAGTGGGTaGAGTGCACCGAGTGTGAGCCAAAGCAGGGTGAGGCATCACCTC | + |
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Preference number: 5 (lower is better) Translates to: FISLGSVRQWVQDSG*SAPSVSQSRVRHHL Trigger: GAGGTGATGCCTCACCCTGCTTTGGCTCACACTCGGTGCACTGCACCCACTGTCCTGCACCCACTGTCTGACACTCCCCAGTGAGATGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 90 bp | CACGTTCCCTCCTTTCGCACAAGTCGGTTGCTGCCCTCTACCCTTTaGCAGGGCATAAGAATGACTTCCGCCGCGGAGATCCAGCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: HVPSFRTSRLLPSTL*QGIRMTSAAEIQRF Trigger: GAAGCGCTGGATCTCCGCGGCGGAAGTCATTCTTATGCCCTGCCAAAGGGTAGAGGGCAGCAACCGACTTGTGCGAAAGGAGGGAACGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000629052.1 ENST00000630120.2 |
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| CDS CCA 90 bp | CACTGTTCTGCAGCCTCCGCTGCTGATACCCAGGCAAACAGGGTCTaGAGTGGACCTCCAGCAAACTCCAACAGACCTGCAGCTGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: HCSAASAADTQANRV*SGPPANSNRPAAEG Trigger: ACCCTCAGCTGCAGGTCTGTTGGAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTGCCTGGGTATCAGCAGCGGAGGCTGCAGAACAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS TCA 90 bp | CAGCTGCAGGATCAGTGGGTCCTAGGGCTTCCTGAAACGCAGTCTTaGGGCTCCTGTAGGAAATTTTCTCCCTCTCCCCGCAGGCATGGC | + |
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Preference number: 5 (lower is better) Translates to: QLQDQWVLGLPETQS*GSCRKFSPSPRRHG Trigger: GCCATGCCTGCGGGGAGAGGGAGAAAATTTCCTACAGGAGCCTCAAGACTGCGTTTCAGGAAGCCCTAGGACCCACTGATCCTGCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000628435.1 ENST00000629052.1 ENST00000629295.1 ENST00000630120.2 ENST00000656042.1 |
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| CDS GCA 90 bp | AAGCTCGAACTGGGTGGAGCTGACTGCAGCTCAAGGAGGACTGCCTaGCTCTGTAGACTCCACCTCTGGGAGCAGGGCATAGGCAAACAA | + |
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Preference number: 5 (lower is better) Translates to: KLELGGADCSSRRTA*LCRLHLWEQGIGKQ Trigger: TTGTTTGCCTATGCCCTGCTCCCAGAGGTGGAGTCTACAGAGGCAGGCAGTCCTCCTTGAGCTGCAGTCAGCTCCACCCAGTTCGAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS TCA 90 bp | AGCTTTGAAGAGAGTAGTGGTTCTCCCAGCACCCAGCTGGAGATCTaGGAACAGACAGACTGCCTCCTCAAGGGGGTCCCTGACCCCCAA | + |
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Preference number: 5 (lower is better) Translates to: SFEESSGSPSTQLEI*EQTDCLLKGVPDPQ Trigger: TTGGGGGTCAGGGACCCCCTTGAGGAGGCAGTCTGTCTGTTCTCAGATCTCCAGCTGGGTGCTGGGAGAACCACTACTCTCTTCAAAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 90 bp | CCTCCCTGCTACAAATGTCATGAACTTCCCAAGGCTCCACCTCAGTaGGTAGGCTGGTTGGAGTTTCTCTGGGGACCCCCTCCAACATGG | + |
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Preference number: 5 (lower is better) Translates to: PPCYKCHELPKAPPQ*VGWLEFLWGPPPTW Trigger: CCATGTTGGAGGGGGTCCCCAGAGAAACTCCAACCAGCCTACCCACTGAGGTGGAGCCTTGGGAAGTTCATGACATTTGTAGCAGGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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| CDS TCA 90 bp | CAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACGGAGAAGATGGGTaGTTTCTGCATTTCCGACTGAGGTACCAGGTTCATCTCACTGGG | + |
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Preference number: 5 (lower is better) Translates to: QLQSTAPSVSDGEDG*FLHFRLRYQVHLTG Trigger: CCCAGTGAGATGAACCTGGTACCTCAGTCGGAAATGCAGAAATCACCCATCTTCTCCGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 90 bp | TGGGTGATTTCTGCATTTCCGACTGAGGTACCAGGTTCATCTCACTaGGGAGTGTCAGACAGTGGGTGCAGGACAGTGGGTGCAGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: WVISAFPTEVPGSSH*GVSDSGCRTVGAVH Trigger: GTGCACTGCACCCACTGTCCTGCACCCACTGTCTGACACTCCCCAGTGAGATGAACCTGGTACCTCAGTCGGAAATGCAGAAATCACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 90 bp | GGAGCAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACGGAGAAGATaGGTGATTTCTGCATTTCCGACTGAGGTACCAGGTTCATCTCAC | + |
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Preference number: 5 (lower is better) Translates to: GAAPVYSSQRERRRR*VISAFPTEVPGSSH Trigger: GTGAGATGAACCTGGTACCTCAGTCGGAAATGCAGAAATCACCCATCTTCTCCGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 90 bp | AGTGCACCGAGTGTGAGCCAAAGCAGGGTGAGGCATCACCTCACCTaGGAATTGCAGGGGGTCAGGGAATTCCCTTTCCTAGTCAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: SAPSVSQSRVRHHLT*ELQGVREFPFLVKE Trigger: TTCTTTGACTAGGAAAGGGAATTCCCTGACCCCCTGCAATTCCCAGGTGAGGTGATGCCTCACCCTGCTTTGGCTCACACTCGGTGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 90 bp | CTTCCCAAGGCTCCACCTCAGTGGGTAGGCTGGTTGGAGTTTCTCTaGGGACCCCCTCCAACATGGCTGTCTCATTCCCAATTTTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LPKAPPQWVGWLEFL*GPPPTWLSHSQFWF Trigger: AAACCAAAATTGGGAATGAGACAGCCATGTTGGAGGGGGTCCCCAGAGAAACTCCAACCAGCCTACCCACTGAGGTGGAGCCTTGGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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| CDS GCA 90 bp | TTTGCAATGGTCTTAGCAAATGGCACACCAGGAGATTATATCCGGTaGCTGGCTCAGAGGGTCCTAGCCCACGGAGCCTTGCTCATTGCT | + |
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Preference number: 5 (lower is better) Translates to: FAMVLANGTPGDYIR*LAQRVLAHGALLIA Trigger: AGCAATGAGCAAGGCTCCGTGGGCTAGGACCCTCTGAGCCAGGCACCGGATATAATCTCCTGGTGTGCCATTTGCTAAGACCATTGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 90 bp | TACAAATGTCATGAACTTCCCAAGGCTCCACCTCAGTGGGTAGGCTaGTTGGAGTTTCTCTGGGGACCCCCTCCAACATGGCTGTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: YKCHELPKAPPQWVG*LEFLWGPPPTWLSH Trigger: ATGAGACAGCCATGTTGGAGGGGGTCCCCAGAGAAACTCCAACCAGCCTACCCACTGAGGTGGAGCCTTGGGAAGTTCATGACATTTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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| CDS TCA 90 bp | TTAACTCACATGATCACAAGGTCCCACAATAGGCTGTCTGCAGGCTaGGGAGCAAGGAGAGCCAGTGTGAGTTCCAAAATTGAAGGACTT | + |
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Preference number: 5 (lower is better) Translates to: LTHMITRSHNRLSAG*GARRASVSSKIEGL Trigger: AAGTCCTTCAATTTTGGAACTCACACTGGCTCTCCTTGCTCCTCAGCCTGCAGACAGCCTATTGTGGGACCTTGTGATCATGTGAGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630120.2 |
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| CDS GCA 90 bp | AGTCAAGACCCATCGGTGTGCTGTATTCAGGAAACCCATCTCACGTaGAAAGACACACATAGGCTCAAAATAAAGGGATGGAGGAAGATC | + |
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Preference number: 5 (lower is better) Translates to: SQDPSVCCIQETHLT*KDTHRLKIKGWRKI Trigger: GATCTTCCTCCATCCCTTTATTTTGAGCCTATGTGTGTCTTTGCACGTGAGATGGGTTTCCTGAATACAGCACACCGATGGGTCTTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS GCA 90 bp | CTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTaGCCTACAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: LYRQANAERFCHHQA*PTRAPEGSTKHGKE Trigger: TTCTTTTCCATGTTTAGTGCTTCCTTCAGGAGCTCTTGTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTGTAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS GCA 90 bp | GACAGACGGCACTTGAAAAATCGGGTCACTCCCACCCTAATACTGTaGTTTTGCAATGGTCTTAGCAAATGGCACACCAGGAGATTATAT | + |
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Preference number: 5 (lower is better) Translates to: DRRHLKNRVTPTLIL*FCNGLSKWHTRRLY Trigger: ATATAATCTCCTGGTGTGCCATTTGCTAAGACCATTGCAAAAGCACAGTATTAGGGTGGGAGTGACCCGATTTTTCAAGTGCCGTCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 90 bp | ACAAAAGTGCTTAAGTACAGTCTGAGAAAAGTTGAGTTGAGGATCTaGGAGATGAGACCGACTCAGAGATTCATCGTGGTGGGTTCTAAG | + |
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Preference number: 5 (lower is better) Translates to: TKVLKYSLRKVELRI*EMRPTQRFIVVGSK Trigger: CTTAGAACCCACCACGATGAATCTCTGAGTCGGTCTCATCTCCCAGATCCTCAACTCAACTTTTCTCAGACTGTACTTAAGCACTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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| CDS GCA 90 bp | ACTAAACATGGAAAAGAACAACCAGTACCAGCCACTGCAAAAACATaGCAAATTGTAAAGACCATCGAGGCTAGGAAGAAACTGCATCAA | + |
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Preference number: 5 (lower is better) Translates to: TKHGKEQPVPATAKT*QIVKTIEARKKLHQ Trigger: TTGATGCAGTTTCTTCCTAGCCTCGATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACTGGTTGTTCTTTTCCATGTTTAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS TCA 90 bp | GACACACCCAGGATCAATACTTTGTATCCTTCAACCCAATCAAGTTaGCACTCAGTATTAACCATCACAACATTAGAAGTCAAGTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: DTPRINTLYPSTQSS*HSVLTITTLEVKLL Trigger: CAACAACTTGACTTCTAATGTTGTGATGGTTAATACTGAGTGTCAACTTGATTGGGTTGAAGGATACAAAGTATTGATCCTGGGTGTGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630120.2 |
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| CDS CCA 72 bp | CCTCCTGGCCCCTCCTGGAGACCGCAGCCGGTTTCTTaGCAGCTTCGCGCCCCAGAGCAGGAAGGGACCGGG | + |
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Preference number: 6 (lower is better) Translates to: PPGPSWRPQPVS*QLRAPEQEGTG Trigger: CCCGGTCCCTTCCTGCTCTGGGGCGCGAAGCTGCCAAGAAACCGGCTGCGGTCTCCAGGAGGGGCCAGGAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629052.1 |
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| CDS CAA 72 bp | GCCTCCTGGCCCCTCCTGGAGACCGCAGCCGGTTTCTaGGCAGCTTCGCGCCCCAGAGCAGGAAGGGACCGG | + |
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Preference number: 6 (lower is better) Translates to: ASWPLLETAAGF*AASRPRAGRDR Trigger: CCGGTCCCTTCCTGCTCTGGGGCGCGAAGCTGCCAAGAAACCGGCTGCGGTCTCCAGGAGGGGCCAGGAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629052.1 |
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| CDS TCA 72 bp | GCGCTTTGGAACCCAGGAGGTATCCTCAGCGAGGCCTaGTGGAGGACAGGAGGGGCTGGCCGAGGGTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: ALWNPGGILSEA*WRTGGAGRGWR Trigger: TCTCCACCCTCGGCCAGCCCCTCCTGTCCTCCATCAGGCCTCGCTGAGGATACCTCCTGGGTTCCAAAGCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000628435.1 ENST00000629052.1 ENST00000629295.1 ENST00000630120.2 ENST00000656042.1 |
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| CDS CCA 72 bp | CCGCGGAGATCCAGCGCTTCCTTCCATTTTGCCTCCTaGCCCCTCCTGGAGACCGCAGCCGGTTTCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: PRRSSASFHFAS*PLLETAAGFLA Trigger: TGCCAAGAAACCGGCTGCGGTCTCCAGGAGGGGCCAGGAGGCAAAATGGAAGGAAGCGCTGGATCTCCGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629052.1 |
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| CDS CCA 72 bp | GCTGAACCCCTTGGGTGGGGAAGGGAAAGGCTGCAGTaGCTTCTGGATGGGAACCAGCCACCCGGCTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: AEPLGWGRERLQ*LLDGNQPPGCV Trigger: CACACAGCCGGGTGGCTGGTTCCCATCCAGAAGCCACTGCAGCCTTTCCCTTCCCCACCCAAGGGGTTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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| CDS CAA 72 bp | CTGGATGGGAACCAGCCACCCGGCTGTGTGAGACTCTaGAGCCATGTGTCCCAGCCCCAGCATGGAGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LDGNQPPGCVRL*SHVSQPQHGGE Trigger: CTCCCCTCCATGCTGGGGCTGGGACACATGGCTCAAGAGTCTCACACAGCCGGGTGGCTGGTTCCCATCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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| CDS GCA 72 bp | CTGGGGAGTGTCAGACAGTGGGTGCAGGACAGTGGGTaGAGTGCACCGAGTGTGAGCCAAAGCAGGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LGSVRQWVQDSG*SAPSVSQSRVR Trigger: CCTCACCCTGCTTTGGCTCACACTCGGTGCACTGCACCCACTGTCCTGCACCCACTGTCTGACACTCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CAA 90 bp | CATAAGAATGACTTCCGCCGCGGAGATCCAGCGCTTCCTTCCATTTaGCCTCCTGGCCCCTCCTGGAGACCGCAGCCGGTTTCTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: HKNDFRRGDPALPSI*PPGPSWRPQPVSWQ Trigger: CTGCCAAGAAACCGGCTGCGGTCTCCAGGAGGGGCCAGGAGGCAAAATGGAAGGAAGCGCTGGATCTCCGCGGCGGAAGTCATTCTTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629052.1 |
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| CDS TCA 72 bp | GCCCACGGAGCCTTGCTCATTGCTAGCACAGCAGACTaGGATCAAACTGCAAGGTGGCAGCAAGGCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: AHGALLIASTAD*DQTARWQQGWG Trigger: CCCCCAGCCTTGCTGCCACCTTGCAGTTTGATCTCAGTCTGCTGTGCTAGCAATGAGCAAGGCTCCGTGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS TCA 72 bp | GAGGAGGGGCCAGGCTCCTCCCTGCTACAAATGTCATaGACTTCCCAAGGCTCCACCTCAGTGGGTAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: EEGPGSSLLQMS*TSQGSTSVGRL Trigger: CAGCCTACCCACTGAGGTGGAGCCTTGGGAAGTTCATGACATTTGTAGCAGGGAGGAGCCTGGCCCCTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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| CDS GCA 72 bp | AAAGCGGCCGAGAAGCTCGAACTGGGTGGAGCTGACTaGAGCTCAAGGAGGACTGCCTGCCTCTGTAGACTC | + |
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Preference number: 6 (lower is better) Translates to: KAAEKLELGGAD*SSRRTACLCRL Trigger: GAGTCTACAGAGGCAGGCAGTCCTCCTTGAGCTGCAGTCAGCTCCACCCAGTTCGAGCTTCTCGGCCGCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 72 bp | GCAGCCTCCGCTGCTGATACCCAGGCAAACAGGGTCTaGAGTGGACCTCCAGCAAACTCCAACAGACCTGCA | + |
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Preference number: 6 (lower is better) Translates to: AASAADTQANRV*SGPPANSNRPA Trigger: TGCAGGTCTGTTGGAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTGCCTGGGTATCAGCAGCGGAGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CAA 72 bp | GCCAGCGTCCCTGCTACAGTGCTTCCAGCCTGTAGCTaGAATGCCAGATTCCACACAGGAAGAGGAGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: ASVPATVLPACS*NARFHTGRGGA Trigger: GGCCCCTCCTCTTCCTGTGTGGAATCTGGCATTCAAGCTACAGGCTGGAAGCACTGTAGCAGGGACGCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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| CDS CAA 90 bp | AGGACCCTGGCAGACCCACACGTTCCCTCCTTTCGCACAAGTCGGTaGCTGCCCTCTACCCTTTGGCAGGGCATAAGAATGACTTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: RTLADPHVPSFRTSR*LPSTLWQGIRMTSA Trigger: GGCGGAAGTCATTCTTATGCCCTGCCAAAGGGTAGAGGGCAGCAACCGACTTGTGCGAAAGGAGGGAACGTGTGGGTCTGCCAGGGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000629052.1 ENST00000630120.2 |
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| CDS CAA 90 bp | ACACGTTCCCTCCTTTCGCACAAGTCGGTTGCTGCCCTCTACCCTTaGGCAGGGCATAAGAATGACTTCCGCCGCGGAGATCCAGCGCTT | + |
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Preference number: 6 (lower is better) Translates to: TRSLLSHKSVAALYP*AGHKNDFRRGDPAL Trigger: AAGCGCTGGATCTCCGCGGCGGAAGTCATTCTTATGCCCTGCCAAAGGGTAGAGGGCAGCAACCGACTTGTGCGAAAGGAGGGAACGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000629052.1 ENST00000630120.2 |
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| CDS TCA 72 bp | CCAGCGTCCCTGCTACAGTGCTTCCAGCCTGTAGCTTaGATGCCAGATTCCACACAGGAAGAGGAGGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PASLLQCFQPVA*MPDSTQEEEGP Trigger: TGGCCCCTCCTCTTCCTGTGTGGAATCTGGCATTCAAGCTACAGGCTGGAAGCACTGTAGCAGGGACGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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| CDS TCA 72 bp | GTTCACCAATATCCACTGTTCTGCAGCCTCCGCTGCTaGTACCCAGGCAAACAGGGTCTGGAGTGGACCTCC | + |
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Preference number: 6 (lower is better) Translates to: VHQYPLFCSLRC*YPGKQGLEWTS Trigger: GGAGGTCCACTCCAGACCCTGTTTGCCTGGGTATCAGCAGCGGAGGCTGCAGAACAGTGGATATTGGTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS GCA 72 bp | GTCTTAGCAAATGGCACACCAGGAGATTATATCCGGTaGCTGGCTCAGAGGGTCCTAGCCCACGGAGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: VLANGTPGDYIR*LAQRVLAHGAL Trigger: CAAGGCTCCGTGGGCTAGGACCCTCTGAGCCAGGCACCGGATATAATCTCCTGGTGTGCCATTTGCTAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 72 bp | TCCTTTCGCACAAGTCGGTTGCTGCCCTCTACCCTTTaGCAGGGCATAAGAATGACTTCCGCCGCGGAGATC | + |
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Preference number: 6 (lower is better) Translates to: SFRTSRLLPSTL*QGIRMTSAAEI Trigger: GATCTCCGCGGCGGAAGTCATTCTTATGCCCTGCCAAAGGGTAGAGGGCAGCAACCGACTTGTGCGAAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000629052.1 ENST00000630120.2 |
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| CDS CAA 72 bp | CTCCTTTCGCACAAGTCGGTTGCTGCCCTCTACCCTTaGGCAGGGCATAAGAATGACTTCCGCCGCGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: LLSHKSVAALYP*AGHKNDFRRGD Trigger: ATCTCCGCGGCGGAAGTCATTCTTATGCCCTGCCAAAGGGTAGAGGGCAGCAACCGACTTGTGCGAAAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000629052.1 ENST00000630120.2 |
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| CDS CAA 72 bp | GCAGACCCACACGTTCCCTCCTTTCGCACAAGTCGGTaGCTGCCCTCTACCCTTTGGCAGGGCATAAGAATG | + |
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Preference number: 6 (lower is better) Translates to: ADPHVPSFRTSR*LPSTLWQGIRM Trigger: CATTCTTATGCCCTGCCAAAGGGTAGAGGGCAGCAACCGACTTGTGCGAAAGGAGGGAACGTGTGGGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000629052.1 ENST00000630120.2 |
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| CDS TCA 72 bp | GATCAGTGGGTCCTAGGGCTTCCTGAAACGCAGTCTTaGGGCTCCTGTAGGAAATTTTCTCCCTCTCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: DQWVLGLPETQS*GSCRKFSPSPR Trigger: GCGGGGAGAGGGAGAAAATTTCCTACAGGAGCCTCAAGACTGCGTTTCAGGAAGCCCTAGGACCCACTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000628435.1 ENST00000629052.1 ENST00000629295.1 ENST00000630120.2 ENST00000656042.1 |
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| CDS CCA 72 bp | AGTGTGAGCCAAAGCAGGGTGAGGCATCACCTCACCTaGGAATTGCAGGGGGTCAGGGAATTCCCTTTCCTA | + |
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Preference number: 6 (lower is better) Translates to: SVSQSRVRHHLT*ELQGVREFPFL Trigger: TAGGAAAGGGAATTCCCTGACCCCCTGCAATTCCCAGGTGAGGTGATGCCTCACCCTGCTTTGGCTCACACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 72 bp | TCTGCATTTCCGACTGAGGTACCAGGTTCATCTCACTaGGGAGTGTCAGACAGTGGGTGCAGGACAGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SAFPTEVPGSSH*GVSDSGCRTVG Trigger: ACCCACTGTCCTGCACCCACTGTCTGACACTCCCCAGTGAGATGAACCTGGTACCTCAGTCGGAAATGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 72 bp | CCAGTCTACAGCTCCCAGCGTGAGCGACGGAGAAGATaGGTGATTTCTGCATTTCCGACTGAGGTACCAGGT | + |
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Preference number: 6 (lower is better) Translates to: PVYSSQRERRRR*VISAFPTEVPG Trigger: ACCTGGTACCTCAGTCGGAAATGCAGAAATCACCCATCTTCTCCGTCGCTCACGCTGGGAGCTGTAGACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS TCA 72 bp | TCGAATAGGAGCAGCTCCAGTCTACAGCTCCCAGCGTaGGCGACGGAGAAGATGGGTGATTTCTGCATTTCC | + |
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Preference number: 6 (lower is better) Translates to: SNRSSSSLQLPA*ATEKMGDFCIS Trigger: GGAAATGCAGAAATCACCCATCTTCTCCGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTGCTCCTATTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 72 bp | GCTTTGAAGAGAGTAGTGGTTCTCCCAGCACCCAGCTaGAGATCTGAGAACAGACAGACTGCCTCCTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: ALKRVVVLPAPS*RSENRQTASSR Trigger: CCTTGAGGAGGCAGTCTGTCTGTTCTCAGATCTCCAGCTGGGTGCTGGGAGAACCACTACTCTCTTCAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 72 bp | TACAAATGTCATGAACTTCCCAAGGCTCCACCTCAGTaGGTAGGCTGGTTGGAGTTTCTCTGGGGACCCCCT | + |
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Preference number: 6 (lower is better) Translates to: YKCHELPKAPPQ*VGWLEFLWGPP Trigger: AGGGGGTCCCCAGAGAAACTCCAACCAGCCTACCCACTGAGGTGGAGCCTTGGGAAGTTCATGACATTTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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| CDS TCA 72 bp | CTCTCCCCGCAGGCATGGCTTTTGTACGAGACGGAATaGATGTCAAGCTCAGGTTCAACTCGCGCTTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LSPQAWLLYETE*MSSSGSTRALE Trigger: TTCCAAAGCGCGAGTTGAACCTGAGCTTGACATTCATTCCGTCTCGTACAAAAGCCATGCCTGCGGGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000628435.1 ENST00000629052.1 ENST00000629295.1 ENST00000630120.2 ENST00000656042.1 |
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| CDS TCA 72 bp | TCTACAGCTCCCAGCGTGAGCGACGGAGAAGATGGGTaGTTTCTGCATTTCCGACTGAGGTACCAGGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: STAPSVSDGEDG*FLHFRLRYQVH Trigger: ATGAACCTGGTACCTCAGTCGGAAATGCAGAAATCACCCATCTTCTCCGTCGCTCACGCTGGGAGCTGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS TCA 72 bp | GGTCAGGGAATTCCCTTTCCTAGTCAAAGAAAGGGGTaGCAGACGGCACTTGAAAAATCGGGTCACTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: GQGIPFPSQRKG*QTALEKSGHSH Trigger: GTGGGAGTGACCCGATTTTTCAAGTGCCGTCTGTCACCCCTTTCTTTGACTAGGAAAGGGAATTCCCTGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CAA 72 bp | TTGTCTCCTCCAGCTTCTGGTAGTGCCAGGCATTCCTaGGCTTGTAGCAATGTAACTCCAATCCTTGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: LSPPASGSARHS*ACSNVTPILAP Trigger: TGGGGCAAGGATTGGAGTTACATTGCTACAAGCCAAGGAATGCCTGGCACTACCAGAAGCTGGAGGAGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630120.2 |
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| CDS TCA 72 bp | ATGATCACAAGGTCCCACAATAGGCTGTCTGCAGGCTaGGGAGCAAGGAGAGCCAGTGTGAGTTCCAAAATT | + |
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Preference number: 6 (lower is better) Translates to: MITRSHNRLSAG*GARRASVSSKI Trigger: AATTTTGGAACTCACACTGGCTCTCCTTGCTCCTCAGCCTGCAGACAGCCTATTGTGGGACCTTGTGATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630120.2 |
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| CDS CCA 72 bp | CTCCTCCTCCAAAGGAACACAGCTCCTCACCAGCAATaGAACAAAGCTGGATGGAGAATGACTTTGACGAGT | + |
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Preference number: 6 (lower is better) Translates to: LLLQRNTAPHQQ*NKAGWRMTLTS Trigger: ACTCGTCAAAGTCATTCTCCATCCAGCTTTGTTCCATTGCTGGTGAGGAGCTGTGTTCCTTTGGAGGAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CAA 90 bp | AATCCTCCCTTGTCTCCTCCAGCTTCTGGTAGTGCCAGGCATTCCTaGGCTTGTAGCAATGTAACTCCAATCCTTGCCCCATCTTCATAT | + |
|
Preference number: 6 (lower is better) Translates to: NPPLSPPASGSARHS*ACSNVTPILAPSSY Trigger: ATATGAAGATGGGGCAAGGATTGGAGTTACATTGCTACAAGCCAAGGAATGCCTGGCACTACCAGAAGCTGGAGGAGACAAGGGAGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630120.2 |
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| CDS CAA 90 bp | GCTACTCGGGAGGCTGAAGTGGAAGGATCTCTTGAGCTGGGGAGTTaGAGGTTGCATTTAGTTATGATCATGCCACTGCATTCAAACCTG | + |
|
Preference number: 6 (lower is better) Translates to: ATREAEVEGSLELGS*RLHLVMIMPLHSNL Trigger: CAGGTTTGAATGCAGTGGCATGATCATAACTAAATGCAACCTCAAACTCCCCAGCTCAAGAGATCCTTCCACTTCAGCCTCCCGAGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630120.2 |
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| CDS GCA 72 bp | CAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTaGCCTACAAGAGCTCCTGAAGGAAGCACTAAACAT | + |
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Preference number: 6 (lower is better) Translates to: QANAERFCHHQA*PTRAPEGSTKH Trigger: ATGTTTAGTGCTTCCTTCAGGAGCTCTTGTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CAA 72 bp | TTTCCTTTGAAGCTCCTAAAGGACATTAATCCTCCCTaGTCTCCTCCAGCTTCTGGTAGTGCCAGGCATTCC | + |
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Preference number: 6 (lower is better) Translates to: FPLKLLKDINPP*SPPASGSARHS Trigger: GGAATGCCTGGCACTACCAGAAGCTGGAGGAGACAAGGGAGGATTAATGTCCTTTAGGAGCTTCAAAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630120.2 |
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| CDS TCA 72 bp | GTTCAGCTAAGGGCAGAGTTCTTTGTCCCACAGCCATaGAAACTCAGGCTTGCAGACAATTTGAATGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: VQLRAEFFVPQP*KLRLADNLNGE Trigger: CTCACCATTCAAATTGTCTGCAAGCCTGAGTTTTCATGGCTGTGGGACAAAGAACTCTGCCCTTAGCTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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| CDS GCA 72 bp | CCATCGGTGTGCTGTATTCAGGAAACCCATCTCACGTaGAAAGACACACATAGGCTCAAAATAAAGGGATGG | + |
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Preference number: 6 (lower is better) Translates to: PSVCCIQETHLT*KDTHRLKIKGW Trigger: CCATCCCTTTATTTTGAGCCTATGTGTGTCTTTGCACGTGAGATGGGTTTCCTGAATACAGCACACCGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS GCA 72 bp | CACTTGAAAAATCGGGTCACTCCCACCCTAATACTGTaGTTTTGCAATGGTCTTAGCAAATGGCACACCAGG | + |
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Preference number: 6 (lower is better) Translates to: HLKNRVTPTLIL*FCNGLSKWHTR Trigger: CCTGGTGTGCCATTTGCTAAGACCATTGCAAAAGCACAGTATTAGGGTGGGAGTGACCCGATTTTTCAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 72 bp | ACCCTAATACTGTGCTTTTGCAATGGTCTTAGCAAATaGCACACCAGGAGATTATATCCGGTGCCTGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: TLILCFCNGLSK*HTRRLYPVPGS Trigger: TGAGCCAGGCACCGGATATAATCTCCTGGTGTGCCATTTGCTAAGACCATTGCAAAAGCACAGTATTAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CAA 72 bp | GAGGCTGAAGTGGAAGGATCTCTTGAGCTGGGGAGTTaGAGGTTGCATTTAGTTATGATCATGCCACTGCAT | + |
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Preference number: 6 (lower is better) Translates to: EAEVEGSLELGS*RLHLVMIMPLH Trigger: ATGCAGTGGCATGATCATAACTAAATGCAACCTCAAACTCCCCAGCTCAAGAGATCCTTCCACTTCAGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630120.2 |
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| CDS CCA 72 bp | AAGGAACACAGCTCCTCACCAGCAATGGAACAAAGCTaGATGGAGAATGACTTTGACGAGTTGAGAGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: KEHSSSPAMEQS*MENDFDELREE Trigger: TTCTTCTCTCAACTCGTCAAAGTCATTCTCCATCCAGCTTTGTTCCATTGCTGGTGAGGAGCTGTGTTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 72 bp | CTTAAGTACAGTCTGAGAAAAGTTGAGTTGAGGATCTaGGAGATGAGACCGACTCAGAGATTCATCGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LKYSLRKVELRI*EMRPTQRFIVV Trigger: CACCACGATGAATCTCTGAGTCGGTCTCATCTCCCAGATCCTCAACTCAACTTTTCTCAGACTGTACTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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| CDS CAA 90 bp | CCAACTTTGACAAAAGTGCTTAAGTACAGTCTGAGAAAAGTTGAGTaGAGGATCTGGGAGATGAGACCGACTCAGAGATTCATCGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: PTLTKVLKYSLRKVE*RIWEMRPTQRFIVV Trigger: CACCACGATGAATCTCTGAGTCGGTCTCATCTCCCAGATCCTCAACTCAACTTTTCTCAGACTGTACTTAAGCACTTTTGTCAAAGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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| CDS TCA 72 bp | AACAGCTATGTCCATTTCTTCCTTGAGTTTATCCCCTaGCATAGCACTCTTATCCTCCAAAGCCTGCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: NSYVHFFLEFIP*HSTLILQSLLV Trigger: TACCAGCAGGCTTTGGAGGATAAGAGTGCTATGTCAGGGGATAAACTCAAGGAAGAAATGGACATAGCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628435.1 |
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| CDS GCA 72 bp | AGAATGAATTTGGAGGATGTCTGGATCAGTTTGGGCTaGCACAACAATAATGCCATAGATGGTGTGACTGAG | + |
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Preference number: 6 (lower is better) Translates to: RMNLEDVWISLG*HNNNAIDGVTE Trigger: CTCAGTCACACCATCTATGGCATTATTGTTGTGGCAGCCCAAACTGATCCAGACATCCTCCAAATTCATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628435.1 |
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| CDS CCA 72 bp | CCTTTCCATCCCACTGACTCAAATGTTAATCTCCTTTaGCACAGACACACCCAGGATCAATACTTTGTATCC | + |
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Preference number: 6 (lower is better) Translates to: PFHPTDSNVNLL*HRHTQDQYFVS Trigger: GGATACAAAGTATTGATCCTGGGTGTGTCTGTGCCAAAGGAGATTAACATTTGAGTCAGTGGGATGGAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630120.2 |
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| CDS CAA 72 bp | GACAAAATTTCCAGAGGAAAAATCAGGCAGCAACAATaGCTGTTCACCAATATCCACTGTTCTGCAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: DKISRGKIRQQQ*LFTNIHCSAAS Trigger: GGAGGCTGCAGAACAGTGGATATTGGTGAACAGCAATTGTTGCTGCCTGATTTTTCCTCTGGAAATTTTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS TCA 72 bp | TCCCACAGCCATGAAAACTCAGGCTTGCAGACAATTTaGATGGTGAGTGAGACAGGATTTTATTGGGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: SHSHENSGLQTI*MVSETGFYWVK Trigger: TTTCACCCAATAAAATCCTGTCTCACTCACCATTCAAATTGTCTGCAAGCCTGAGTTTTCATGGCTGTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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| CDS GCA 72 bp | GGAAAAGAACAACCAGTACCAGCCACTGCAAAAACATaGCAAATTGTAAAGACCATCGAGGCTAGGAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: GKEQPVPATAKT*QIVKTIEARKK Trigger: TTTCTTCCTAGCCTCGATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACTGGTTGTTCTTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CAA 72 bp | ACAAAAGTGCTTAAGTACAGTCTGAGAAAAGTTGAGTaGAGGATCTGGGAGATGAGACCGACTCAGAGATTC | + |
|
Preference number: 6 (lower is better) Translates to: TKVLKYSLRKVE*RIWEMRPTQRF Trigger: GAATCTCTGAGTCGGTCTCATCTCCCAGATCCTCAACTCAACTTTTCTCAGACTGTACTTAAGCACTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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| CDS TCA 72 bp | TGGAACAAAGCTGGATGGAGAATGACTTTGACGAGTTaGGAGAAGAAGGCTTCAGATGATCAAACTAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: WNKAGWRMTLTS*EKKASDDQTNL Trigger: CAGATTAGTTTGATCATCTGAAGCCTTCTTCTCTCAACTCGTCAAAGTCATTCTCCATCCAGCTTTGTTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS GCA 72 bp | AACAAACAGAAAGGACATTCACACCAAAACCCCATCTaGACGTCACCATCATCAAAGACCAAAGGTAGATTA | + |
|
Preference number: 6 (lower is better) Translates to: NKQKGHSHQNPI*TSPSSKTKGRL Trigger: TAATCTACCTTTGGTCTTTGATGATGGTGACGTGCAGATGGGGTTTTGGTGTGAATGTCCTTTCTGTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 72 bp | ACCAATGAGAGCAAAGACACAACATACCAGAATCTCTaGGACACATTCAAAGCAGTGTGTAGAGGGAAATTT | + |
|
Preference number: 6 (lower is better) Translates to: TNESKDTTYQNL*DTFKAVCRGKF Trigger: AAATTTCCCTCTACACACTGCTTTGAATGTGTCCCAGAGATTCTGGTATGTTGTGTCTTTGCTCTCATTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 72 bp | CTAAATGCTCCAATTAAAAGACACAGACTGGCAAATTaGATAAAGAGTCAAGACCCATCGGTGTGCTGTATT | + |
|
Preference number: 6 (lower is better) Translates to: LNAPIKRHRLAN*IKSQDPSVCCI Trigger: AATACAGCACACCGATGGGTCTTGACTCTTTATCCAATTTGCCAGTCTGTGTCTTTTAATTGGAGCATTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CCA 72 bp | GATCTCTCGGCAGAAACTCTACAAGTCAGAAGAGAGTaGGGACCAATATTCAACATTCGTAAAGAAAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: DLSAETLQVRRE*GPIFNIRKEKN Trigger: ATTCTTTTCTTTACGAATGTTGAATATTGGTCCCCACTCTCTTCTGACTTGTAGAGTTTCTGCCGAGAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CAA 72 bp | GGTGTACCTGAAAGTGACGAAGAGAATGGAATCAAGTaGGAAAACACTCTAAAGGATATTATCCAGGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GVPESDEENGIK*ENTLKDIIQEN Trigger: GTTCTCCTGGATAATATCCTTTAGAGTGTTTTCCAACTTGATTCCATTCTCTTCGTCACTTTCAGGTACACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CAA 90 bp | CATCTAATTGGTGTACCTGAAAGTGACGAAGAGAATGGAATCAAGTaGGAAAACACTCTAAAGGATATTATCCAGGAGAACTTCCCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: HLIGVPESDEENGIK*ENTLKDIIQENFPN Trigger: ATTGGGGAAGTTCTCCTGGATAATATCCTTTAGAGTGTTTTCCAACTTGATTCCATTCTCTTCGTCACTTTCAGGTACACCAATTAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629295.1 |
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| CDS CAA 72 bp | ATTAGAAGTCAAGTTGTTGAGAGGGACATATTTCCTTaGAAGCTCCTAAAGGACATTAATCCTCCCTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: IRSQVVERDIFP*KLLKDINPPLS Trigger: AGACAAGGGAGGATTAATGTCCTTTAGGAGCTTCAAAGGAAATATGTCCCTCTCAACAACTTGACTTCTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630120.2 |
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| CDS CAA 72 bp | GCTCTTTCTTATCACCCTACCTTCTCTACTCCAACTTaGACAAAAGTGCTTAAGTACAGTCTGAGAAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: ALSYHPTFSTPT*TKVLKYSLRKV Trigger: AACTTTTCTCAGACTGTACTTAAGCACTTTTGTCAAAGTTGGAGTAGAGAAGGTAGGGTGATAAGAAAGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656042.1 |
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