Pregenerated sensors for LINC00504 (Homo sapiens)
Ensembl gene IDs: ENSG00000248360Ensembl transcript IDs: ENST00000505089.6, ENST00000506292.2, ENST00000509654.5, ENST00000515031.5
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCAGATAGGAGAGATTATCTTCACTCTTGTTTGTGGACACAAACATaGCCTGATTTTCCAGCTGTGTGTGATCCCAGGCACACCCACTTC | + |
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Preference number: 5 (lower is better) Translates to: SDRRDYLHSCLWTQT*PDFPAVCDPRHTHF Trigger: GAAGTGGGTGTGCCTGGGATCACACACAGCTGGAAAATCAGGCCATGTTTGTGTCCACAAACAAGAGTGAAGATAATCTCTCCTATCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515031.5 |
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| CDS TCA 90 bp | TTCATGGCCTCTTTCCACACCCCACTGCATCTACAAAGCATTCCCTaGCCACTAGGCCTAACCATGTTTCCTTACTCTTTGAAAATCTGT | + |
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Preference number: 5 (lower is better) Translates to: FMASFHTPLHLQSIP*PLGLTMFPYSLKIC Trigger: ACAGATTTTCAAAGAGTAAGGAAACATGGTTAGGCCTAGTGGTCAGGGAATGCTTTGTAGATGCAGTGGGGTGTGGAAAGAGGCCATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS CCA 90 bp | GGTAGTAGAGTCTTGGCCAGAGTTCCCATTGGATTCCTCCACTCCTaGATTTCTCAGATAGGAGAGATTATCTTCACTCTTGTTTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: GSRVLARVPIGFLHS*ISQIGEIIFTLVCG Trigger: TCCACAAACAAGAGTGAAGATAATCTCTCCTATCTGAGAAATCCAGGAGTGGAGGAATCCAATGGGAACTCTGGCCAAGACTCTACTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509654.5 |
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| CDS CCA 90 bp | CTCCTGGATTTCTCAGATAGGAGAGATTATCTTCACTCTTGTTTGTaGACACAAACATGGCCTGATTTTCCAGCTGTGTGTGATCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: LLDFSDRRDYLHSCL*TQTWPDFPAVCDPR Trigger: CCTGGGATCACACACAGCTGGAAAATCAGGCCATGTTTGTGTCCACAAACAAGAGTGAAGATAATCTCTCCTATCTGAGAAATCCAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515031.5 |
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| CDS CCA 90 bp | CCTTCTTTTAGCTTGGCCAGAGTTCCCATTGGATTCCTCCACTCCTaGATTTCTCAGATAGGAGAGATTATCTTCACTCTTGTTTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: PSFSLARVPIGFLHS*ISQIGEIIFTLVCG Trigger: TCCACAAACAAGAGTGAAGATAATCTCTCCTATCTGAGAAATCCAGGAGTGGAGGAATCCAATGGGAACTCTGGCCAAGCTAAAAGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505089.6 ENST00000515031.5 |
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| CDS CCA 90 bp | CTTTCTTCATTCCTCTCTCTTCTTTCAAATCCTCTTTCTTCTTCATaGCCTCTTTCCACACCCCACTGCATCTACAAAGCATTCCCTGAC | + |
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Preference number: 5 (lower is better) Translates to: LSSFLSLLSNPLSSS*PLSTPHCIYKAFPD Trigger: GTCAGGGAATGCTTTGTAGATGCAGTGGGGTGTGGAAAGAGGCCATGAAGAAGAAAGAGGATTTGAAAGAAGAGAGAGGAATGAAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS TCA 90 bp | GTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTaGGGAATCACCACACCAACTTCCACAATGGTTGAACTAGTTTAC | + |
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Preference number: 5 (lower is better) Translates to: VMGWLGQMVFLVLDP*GITTPTSTMVELVY Trigger: GTAAACTAGTTCAACCATTGTGGAAGTTGGTGTGGTGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS TCA 90 bp | AGTTCTAGATCCCTGAGGAATCACCACACCAACTTCCACAATGGTTaGACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATT | + |
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Preference number: 5 (lower is better) Translates to: SSRSLRNHHTNFHNG*TSLQSHQQCKSVPI Trigger: AATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTTGGTGTGGTGATTCCTCAGGGATCTAGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS CCA 90 bp | AGTCGGTCTAAGATGGCAGCAACTGCAGCTGCAGACCTCAATCAATaGTCCATATCAAGCAATTCAACTTTTTCTTATATATCACGTCAT | + |
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Preference number: 5 (lower is better) Translates to: SRSKMAATAAADLNQ*SISSNSTFSYISRH Trigger: ATGACGTGATATATAAGAAAAAGTTGAATTGCTTGATATGGACCATTGATTGAGGTCTGCAGCTGCAGTTGCTGCCATCTTAGACCGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506292.2 |
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| CDS CCA 90 bp | ATTTCGGAGCCTGTTATTGGTGTATTCAGAGATTCAACTTCTTCATaGTTTAGTCTTGGGACAGTGTATGTGTCGAGGAATTTATCCATT | + |
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Preference number: 5 (lower is better) Translates to: ISEPVIGVFRDSTSS*FSLGTVYVSRNLSI Trigger: AATGGATAAATTCCTCGACACATACACTGTCCCAAGACTAAACCATGAAGAAGTTGAATCTCTGAATACACCAATAACAGGCTCCGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS CCA 72 bp | CACCACACTGAAACTGGGAACGAAAAGAGGTTTAAGTaGACTTGCAGTTCGACGTGGCTGTGTAGGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: HHTETGNEKRFK*TCSSTWLCRPQ Trigger: CTGAGGCCTACACAGCCACGTCGAACTGCAAGTCCACTTAAACCTCTTTTCGTTCCCAGTTTCAGTGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505089.6 ENST00000509654.5 ENST00000515031.5 |
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| CDS CAA 90 bp | TCCTTCTCCTGCCTGATTGCTGTGGCCAGAACTTCCAACACTATGTaGAATAGGAGTGGTGAGACAGGGCATCCATGTGTTGTGCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: SFSCLIAVARTSNTM*NRSGETGHPCVVPV Trigger: AACTGGCACAACACATGGATGCCCTGTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCACAGCAATCAGGCAGGAGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS CAA 72 bp | TGCCTGATTGCTGTGGCCAGAACTTCCAACACTATGTaGAATAGGAGTGGTGAGACAGGGCATCCATGTGTT | + |
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Preference number: 6 (lower is better) Translates to: CLIAVARTSNTM*NRSGETGHPCV Trigger: AACACATGGATGCCCTGTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCACAGCAATCAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS GCA 72 bp | CACACAGCAAGAAGTAACAGCAGATCTTACATCGTCTaGCTCAGCTCTCTCTTCCTTTTCCACCACACTGAA | + |
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Preference number: 6 (lower is better) Translates to: HTARSNSRSYIV*LSSLFLFHHTE Trigger: TTCAGTGTGGTGGAAAAGGAAGAGAGAGCTGAGGCAGACGATGTAAGATCTGCTGTTACTTCTTGCTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505089.6 ENST00000509654.5 ENST00000515031.5 |
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| CDS CAA 90 bp | GACAGATTCTCTGCTCTTTTTAGGGCTGTTTCATGTAGTAAAGTATaGGCTCTGGATGTCAGACTCCCTGGATTGAATCCCCAGCACTTG | + |
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Preference number: 6 (lower is better) Translates to: DRFSALFRAVSCSKV*ALDVRLPGLNPQHL Trigger: CAAGTGCTGGGGATTCAATCCAGGGAGTCTGACATCCAGAGCCAATACTTTACTACATGAAACAGCCCTAAAAAGAGCAGAGAATCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS CAA 90 bp | CCACTCCTGGATTTCTCAGATAGGAGAGATTATCTTCACTCTTGTTaGTGGACACAAACATGGCCTGATTTTCCAGCTGTGTGTGATCCC | + |
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Preference number: 6 (lower is better) Translates to: PLLDFSDRRDYLHSC*WTQTWPDFPAVCDP Trigger: GGGATCACACACAGCTGGAAAATCAGGCCATGTTTGTGTCCACAAACAAGAGTGAAGATAATCTCTCCTATCTGAGAAATCCAGGAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515031.5 |
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| CDS TCA 72 bp | TGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTaGGGAATCACCACACCAACTTCCACAATGGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: WLGQMVFLVLDP*GITTPTSTMVE Trigger: TTCAACCATTGTGGAAGTTGGTGTGGTGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS CAA 72 bp | TCTGCTCTTTTTAGGGCTGTTTCATGTAGTAAAGTATaGGCTCTGGATGTCAGACTCCCTGGATTGAATCCC | + |
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Preference number: 6 (lower is better) Translates to: SALFRAVSCSKV*ALDVRLPGLNP Trigger: GGGATTCAATCCAGGGAGTCTGACATCCAGAGCCAATACTTTACTACATGAAACAGCCCTAAAAAGAGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS TCA 72 bp | CTGAAATACAGAAATATCCAAGACATCTGTGGCTCTTaGGACCTTCTTTTAGCTTGGCCAGAGTTCCCATTG | + |
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Preference number: 6 (lower is better) Translates to: LKYRNIQDICGS*DLLLAWPEFPL Trigger: CAATGGGAACTCTGGCCAAGCTAAAAGAAGGTCTCAAGAGCCACAGATGTCTTGGATATTTCTGTATTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505089.6 ENST00000515031.5 |
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| CDS GCA 72 bp | AGGGCATCCATGTGTTGTGCCAGTTTTCAAAGGGAATaGTTTCAGTTTTTGTCCATTCAGTGTGATATTGGC | + |
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Preference number: 6 (lower is better) Translates to: RASMCCASFQRE*FQFLSIQCDIG Trigger: GCCAATATCACACTGAATGGACAAAAACTGAAAGCATTCCCTTTGAAAACTGGCACAACACATGGATGCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS TCA 72 bp | AAATTACCTTGGGCAGTATGGCCATTTTCACGATATTaGTTCTTCCTGTCCATGAGCATGGACTTTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: KLPWAVWPFSRY*FFLSMSMDFSS Trigger: GGAAGAAAAGTCCATGCTCATGGACAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS CAA 72 bp | TCTGAAATACAGAAATATCCAAGACATCTGTGGCTCTaGAGACCTTCTTTTAGCTTGGCCAGAGTTCCCATT | + |
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Preference number: 6 (lower is better) Translates to: SEIQKYPRHLWL*RPSFSLARVPI Trigger: AATGGGAACTCTGGCCAAGCTAAAAGAAGGTCTCAAGAGCCACAGATGTCTTGGATATTTCTGTATTTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505089.6 ENST00000515031.5 |
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| CDS CAA 72 bp | TTTATATGCTGGATTACGTTTATTGATTTTCGTATGTaGAACCAGCCTTGCATCCCAGGGATGAAGCCCACT | + |
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Preference number: 6 (lower is better) Translates to: FICWITFIDFRM*NQPCIPGMKPT Trigger: AGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATACGAAAATCAATAAACGTAATCCAGCATATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS CAA 72 bp | TGCACATTGATTTTGTATCCTGAGACTTTGCTGAAGTaGCTTATCAGCTTAAGGAGATTTTGGGCTGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: CTLILYPETLLK*LISLRRFWAEA Trigger: TGCCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS CAA 72 bp | GATTTCTCAGATAGGAGAGATTATCTTCACTCTTGTTaGTGGACACAAACATGGCCTGATTTTCCCAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: DFSDRRDYLHSC*WTQTWPDFPKV Trigger: GACCTTGGGAAAATCAGGCCATGTTTGTGTCCACAAACAAGAGTGAAGATAATCTCTCCTATCTGAGAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509654.5 |
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| CDS CAA 72 bp | GATTTCTCAGATAGGAGAGATTATCTTCACTCTTGTTaGTGGACACAAACATGGCCTGATTTTCCAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: DFSDRRDYLHSC*WTQTWPDFPAV Trigger: CACAGCTGGAAAATCAGGCCATGTTTGTGTCCACAAACAAGAGTGAAGATAATCTCTCCTATCTGAGAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515031.5 |
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| CDS TCA 72 bp | TCAAAGGGAATGCTTTCAGTTTTTGTCCATTCAGTGTaGTATTGGCTGTGGGTTTGTCATAGACAGCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: SKGMLSVFVHSV*YWLWVCHRQLL Trigger: TAAGAGCTGTCTATGACAAACCCACAGCCAATATCACACTGAATGGACAAAAACTGAAAGCATTCCCTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS CCA 72 bp | CCTGTTATTGGTGTATTCAGAGATTCAACTTCTTCATaGTTTAGTCTTGGGACAGTGTATGTGTCGAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: PVIGVFRDSTSS*FSLGTVYVSRN Trigger: ATTCCTCGACACATACACTGTCCCAAGACTAAACCATGAAGAAGTTGAATCTCTGAATACACCAATAACAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS CAA 72 bp | GCCCACTTAATCATGGTGGATAAGCTTTTTGATGTGTaGCTGGATTCGGTTTGCCAGTATTTTATTGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: AHLIMVDKLFDV*LDSVCQYFIED Trigger: ATCCTCAATAAAATACTGGCAAACCGAATCCAGCAACACATCAAAAAGCTTATCCACCATGATTAAGTGGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS CAA 90 bp | TGCAAAGTACCAATCAAAGGGGGAGACTATACCCATCAGCACATATaGTTCCATGATAATGCTGATTCACTCTTTCAAACATTTAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: CKVPIKGGDYTHQHI*FHDNADSLFQTFRV Trigger: GACTCTAAATGTTTGAAAGAGTGAATCAGCATTATCATGGAACAATATGTGCTGATGGGTATAGTCTCCCCCTTTGATTGGTACTTTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS TCA 72 bp | TTTCATACAGCAACTCCTCAATTTCAGACCGAATGTTaGAAACTGGCCGCACTAAATCAGAAAGAAAACACT | + |
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Preference number: 6 (lower is better) Translates to: FHTATPQFQTEC*KLAALNQKENT Trigger: AGTGTTTTCTTTCTGATTTAGTGCGGCCAGTTTTCAACATTCGGTCTGAAATTGAGGAGTTGCTGTATGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS CCA 72 bp | AAGATGGCAGCAACTGCAGCTGCAGACCTCAATCAATaGTCCATATCAAGCAATTCAACTTTTTCTTATATA | + |
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Preference number: 6 (lower is better) Translates to: KMAATAAADLNQ*SISSNSTFSYI Trigger: TATATAAGAAAAAGTTGAATTGCTTGATATGGACCATTGATTGAGGTCTGCAGCTGCAGTTGCTGCCATCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506292.2 |
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| CDS TCA 72 bp | AAAGATCAGATAGTTGTAGATATGTGGCATTATTTCTaGGGGCTCTGTTCTGTTCCTTTGATCTATATCTCT | + |
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Preference number: 6 (lower is better) Translates to: KDQIVVDMWHYF*GLCSVPLIYIS Trigger: AGAGATATAGATCAAAGGAACAGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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| CDS CAA 72 bp | AGTTCACTCATGATTTGGCTTTCTGTTTGTCTGTTATaGGTGTATAAGAATGCTTGTGATTTTTGCACATTG | + |
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Preference number: 6 (lower is better) Translates to: SSLMIWLSVCLL*VYKNACDFCTL Trigger: CAATGTGCAAAAATCACAAGCATTCTTATACACCAATAACAGACAAACAGAAAGCCAAATCATGAGTGAACT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505089.6 |
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