RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC00502 (Homo sapiens)

Ensembl gene IDs: ENSG00000224851

Ensembl transcript IDs: ENST00000423621.2

Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CTTCCCAGCTCTGTGCATGCTCCAGTCAGCTCAAGTCCGACCTATTaGCTCTGTTTGATTCAGCAACTTCAGACTCTGGTTAGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: LPSSVHAPVSSSPTY*LCLIQQLQTLVRPD
Trigger: ATCTGGCCTAACCAGAGTCTGAAGTTGCTGAATCAAACAGAGCCAATAGGTCGGACTTGAGCTGACTGGAGCATGCACAGAGCTGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS TCA 90 bp CTGTGCATGCTCCAGTCAGCTCAAGTCCGACCTATTGGCTCTGTTTaGTTCAGCAACTTCAGACTCTGGTTAGGCCAGATGGAAAATCAG +
Preference number: 5 (lower is better)
Translates to: LCMLQSAQVRPIGSV*FSNFRLWLGQMENQ
Trigger: CTGATTTTCCATCTGGCCTAACCAGAGTCTGAAGTTGCTGAATCAAACAGAGCCAATAGGTCGGACTTGAGCTGACTGGAGCATGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS GCA 90 bp CTCAGCCTCTGGTGTAGAAAACTTTCTGGTGCTGTCACTTCACACTaGTTGGCTGTAGCCATCTCCTTAATTGCTAAGAGACACGGCAAC +
Preference number: 5 (lower is better)
Translates to: LSLWCRKLSGAVTSH*LAVAISLIAKRHGN
Trigger: GTTGCCGTGTCTCTTAGCAATTAAGGAGATGGCTACAGCCAAGCAGTGTGAAGTGACAGCACCAGAAAGTTTTCTACACCAGAGGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS TCA 90 bp ACACAGCCATCTGGAAAATCTCTTCTTAGTTCATTAAAACACTTCTaGACCACTGCTGCGCAGCAAGCATCTCTGGCCTTCCTCCCATGG +
Preference number: 5 (lower is better)
Translates to: TQPSGKSLLSSLKHF*TTAAQQASLAFLPW
Trigger: CCATGGGAGGAAGGCCAGAGATGCTTGCTGCGCAGCAGTGGTTCAGAAGTGTTTTAATGAACTAAGAAGAGATTTTCCAGATGGCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS GCA 90 bp AGCCCTTTACAAAAGGAACATACTTGTGCTTCCCAGCTCTGTGCATaGTCCAGTCAGCTCAAGTCCGACCTATTGGCTCTGTTTGATTCA +
Preference number: 5 (lower is better)
Translates to: SPLQKEHTCASQLCA*SSQLKSDLLALFDS
Trigger: TGAATCAAACAGAGCCAATAGGTCGGACTTGAGCTGACTGGAGCATGCACAGAGCTGGGAAGCACAAGTATGTTCCTTTTGTAAAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS CCA 90 bp ACTTTTCTTCACAGATTGGGTGCAGGTGAGGAAACCCTCTCCATCTaGGATAGTTGGCAGCATCAAACACAGCCATCTGGAAAATCTCTT +
Preference number: 5 (lower is better)
Translates to: TFLHRLGAGEETLSI*DSWQHQTQPSGKSL
Trigger: AAGAGATTTTCCAGATGGCTGTGTTTGATGCTGCCAACTATCCCAGATGGAGAGGGTTTCCTCACCTGCACCCAATCTGTGAAGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS CCA 72 bp GGGCCTCTTGCCAACAGCCATGAGAGTGAGCCATGCTaGAAACAGCTCCTTCAGCCCCAGTCAAGCCTTCAG +
Preference number: 6 (lower is better)
Translates to: GPLANSHESEPC*KQLLQPQSSLQ
Trigger: CTGAAGGCTTGACTGGGGCTGAAGGAGCTGTTTCCAGCATGGCTCACTCTCATGGCTGTTGGCAAGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS CAA 72 bp CTATGGAGAAGTCCACATGGTAGGACCTGGGGCCTCTaGCCAACAGCCATGAGAGTGAGCCATGCTGGAAAC +
Preference number: 6 (lower is better)
Translates to: LWRSPHGRTWGL*PTAMRVSHAGN
Trigger: GTTTCCAGCATGGCTCACTCTCATGGCTGTTGGCAAGAGGCCCCAGGTCCTACCATGTGGACTTCTCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS TCA 72 bp CAAGCCTGCTACTGCTCCCCCTGCAGTGGTGTCTCTTaGGTTGGAAAAACAGGATGTCTTCTCTTTCAGGGC +
Preference number: 6 (lower is better)
Translates to: QACYCSPCSGVS*VGKTGCLLFQG
Trigger: GCCCTGAAAGAGAAGACATCCTGTTTTTCCAACTCAAGAGACACCACTGCAGGGGGAGCAGTAGCAGGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS CCA 72 bp CACAGATTGGGTGCAGGTGAGGAAACCCTCTCCATCTaGGATAGTTGGCAGCATCAAACACAGCCATCTGGA +
Preference number: 6 (lower is better)
Translates to: HRLGAGEETLSI*DSWQHQTQPSG
Trigger: TCCAGATGGCTGTGTTTGATGCTGCCAACTATCCCAGATGGAGAGGGTTTCCTCACCTGCACCCAATCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS CAA 72 bp CCTGCTACTGCTCCCCCTGCAGTGGTGTCTCTTGAGTaGGAAAAACAGGATGTCTTCTCTTTCAGGGCCATG +
Preference number: 6 (lower is better)
Translates to: PATAPPAVVSLE*EKQDVFSFRAM
Trigger: CATGGCCCTGAAAGAGAAGACATCCTGTTTTTCCAACTCAAGAGACACCACTGCAGGGGGAGCAGTAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS CAA 72 bp CCAAGCCTGCTACTGCTCCCCCTGCAGTGGTGTCTCTaGAGTTGGAAAAACAGGATGTCTTCTCTTTCAGGG +
Preference number: 6 (lower is better)
Translates to: PSLLLLPLQWCL*SWKNRMSSLSG
Trigger: CCCTGAAAGAGAAGACATCCTGTTTTTCCAACTCAAGAGACACCACTGCAGGGGGAGCAGTAGCAGGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS CAA 72 bp ATGTGCCAGGTCCGGGTTAGGGTTGGGGACTCAATATaGAATATGACTGCACAGCCCCTGTTCTCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: MCQVRVRVGDSI*NMTAQPLFSAS
Trigger: AGAGGCTGAGAACAGGGGCTGTGCAGTCATATTCAATATTGAGTCCCCAACCCTAACCCGGACCTGGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS CAA 90 bp AGCCTCTGGTGTAGAAAACTTTCTGGTGCTGTCACTTCACACTGCTaGGCTGTAGCCATCTCCTTAATTGCTAAGAGACACGGCAACCCC +
Preference number: 6 (lower is better)
Translates to: SLWCRKLSGAVTSHC*AVAISLIAKRHGNP
Trigger: GGGGTTGCCGTGTCTCTTAGCAATTAAGGAGATGGCTACAGCCAAGCAGTGTGAAGTGACAGCACCAGAAAGTTTTCTACACCAGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS CAA 90 bp ATGTCTTGTATGTGCCAGGTCCGGGTTAGGGTTGGGGACTCAATATaGAATATGACTGCACAGCCCCTGTTCTCAGCCTCTGGTGTAGAA +
Preference number: 6 (lower is better)
Translates to: MSCMCQVRVRVGDSI*NMTAQPLFSASGVE
Trigger: TTCTACACCAGAGGCTGAGAACAGGGGCTGTGCAGTCATATTCAATATTGAGTCCCCAACCCTAACCCGGACCTGGCACATACAAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS TCA 72 bp CTCCAGTCAGCTCAAGTCCGACCTATTGGCTCTGTTTaGTTCAGCAACTTCAGACTCTGGTTAGGCCAGATG +
Preference number: 6 (lower is better)
Translates to: LQSAQVRPIGSV*FSNFRLWLGQM
Trigger: CATCTGGCCTAACCAGAGTCTGAAGTTGCTGAATCAAACAGAGCCAATAGGTCGGACTTGAGCTGACTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS CAA 72 bp GCTCCAGTCAGCTCAAGTCCGACCTATTGGCTCTGTTaGATTCAGCAACTTCAGACTCTGGTTAGGCCAGAT +
Preference number: 6 (lower is better)
Translates to: APVSSSPTYWLC*IQQLQTLVRPD
Trigger: ATCTGGCCTAACCAGAGTCTGAAGTTGCTGAATCAAACAGAGCCAATAGGTCGGACTTGAGCTGACTGGAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS CAA 72 bp CTCTGTGCATGCTCCAGTCAGCTCAAGTCCGACCTATaGGCTCTGTTTGATTCAGCAACTTCAGACTCTGGT +
Preference number: 6 (lower is better)
Translates to: LCACSSQLKSDL*ALFDSATSDSG
Trigger: ACCAGAGTCTGAAGTTGCTGAATCAAACAGAGCCAATAGGTCGGACTTGAGCTGACTGGAGCATGCACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS GCA 72 bp TTTACAAAAGGAACATACTTGTGCTTCCCAGCTCTGTaGATGCTCCAGTCAGCTCAAGTCCGACCTATTGGC +
Preference number: 6 (lower is better)
Translates to: FTKGTYLCFPAL*MLQSAQVRPIG
Trigger: GCCAATAGGTCGGACTTGAGCTGACTGGAGCATGCACAGAGCTGGGAAGCACAAGTATGTTCCTTTTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS GCA 72 bp GACACGGCAACCCCAAACAGCCATCTTCCTTTGTATTaGATGAAATACAGGGTAAGCTCTTCCCATAGCCAG +
Preference number: 6 (lower is better)
Translates to: DTATPNSHLPLY*MKYRVSSSHSQ
Trigger: CTGGCTATGGGAAGAGCTTACCCTGTATTTCATGCAATACAAAGGAAGATGGCTGTTTGGGGTTGCCGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS CCA 72 bp TCTGTGCATGCTCCAGTCAGCTCAAGTCCGACCTATTaGCTCTGTTTGATTCAGCAACTTCAGACTCTGGTT +
Preference number: 6 (lower is better)
Translates to: SVHAPVSSSPTY*LCLIQQLQTLV
Trigger: AACCAGAGTCTGAAGTTGCTGAATCAAACAGAGCCAATAGGTCGGACTTGAGCTGACTGGAGCATGCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS CAA 90 bp TCTGTGCATGCTCCAGTCAGCTCAAGTCCGACCTATTGGCTCTGTTaGATTCAGCAACTTCAGACTCTGGTTAGGCCAGATGGAAAATCA +
Preference number: 6 (lower is better)
Translates to: SVHAPVSSSPTYWLC*IQQLQTLVRPDGKS
Trigger: TGATTTTCCATCTGGCCTAACCAGAGTCTGAAGTTGCTGAATCAAACAGAGCCAATAGGTCGGACTTGAGCTGACTGGAGCATGCACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS TCA 72 bp GGAAACAGCTCCTTCAGCCCCAGTCAAGCCTTCAGATaGCACAGTCCTGAACAGATGTATGGAAACAACTTT +
Preference number: 6 (lower is better)
Translates to: GNSSFSPSQAFR*HSPEQMYGNNF
Trigger: AAAGTTGTTTCCATACATCTGTTCAGGACTGTGTCATCTGAAGGCTTGACTGGGGCTGAAGGAGCTGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS CCA 72 bp GGAAAATCAGTCCTCTGGCTTCCTCTTTGCTCTCTTTaGGATCTCTTACTCTGGAAGAAGCTGGTTGTCATG +
Preference number: 6 (lower is better)
Translates to: GKSVLWLPLCSL*DLLLWKKLVVM
Trigger: CATGACAACCAGCTTCTTCCAGAGTAAGAGATCCCAAAGAGAGCAAAGAGGAAGCCAGAGGACTGATTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS TCA 72 bp GATCTCTTACTCTGGAAGAAGCTGGTTGTCATGTCATaGGAACACTCAAGCAGTCCTATGGAGAAGTCCACA +
Preference number: 6 (lower is better)
Translates to: DLLLWKKLVVMS*EHSSSPMEKST
Trigger: TGTGGACTTCTCCATAGGACTGCTTGAGTGTTCTCATGACATGACAACCAGCTTCTTCCAGAGTAAGAGATC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS GCA 72 bp TGGTGTAGAAAACTTTCTGGTGCTGTCACTTCACACTaGTTGGCTGTAGCCATCTCCTTAATTGCTAAGAGA +
Preference number: 6 (lower is better)
Translates to: WCRKLSGAVTSH*LAVAISLIAKR
Trigger: TCTCTTAGCAATTAAGGAGATGGCTACAGCCAAGCAGTGTGAAGTGACAGCACCAGAAAGTTTTCTACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423621.2
CDS CAA 72 bp TGTAGAAAACTTTCTGGTGCTGTCACTTCACACTGCTaGGCTGTAGCCATCTCCTTAATTGCTAAGAGACAC +
Preference number: 6 (lower is better)
Translates to: CRKLSGAVTSHC*AVAISLIAKRH
Trigger: GTGTCTCTTAGCAATTAAGGAGATGGCTACAGCCAAGCAGTGTGAAGTGACAGCACCAGAAAGTTTTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423621.2