Pregenerated sensors for LINC00491 (Homo sapiens)
Ensembl gene IDs: ENSG00000250682Ensembl transcript IDs: ENST00000505527.5, ENST00000508339.1, ENST00000510145.1, ENST00000513815.1, ENST00000658823.1, ENST00000660106.1, ENST00000662437.1, ENST00000669204.1, ENST00000670038.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTaGGTGCGCGCACCATGCGCGAGTCGAAGCAGGGCGAGGCATTGC | + |
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Preference number: 5 (lower is better) Translates to: RVHLTRECQTVGAGQ*VRAPCASRSRARHC Trigger: GCAATGCCTCGCCCTGCTTCGACTCGCGCATGGTGCGCGCACGCACTGACCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508339.1 ENST00000510145.1 ENST00000662437.1 |
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| CDS TCA 90 bp | CAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACTGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGG | + |
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Preference number: 5 (lower is better) Translates to: QLRSTAPSVSDAEDW*FLHFHLRYRVHLTR Trigger: CCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCAGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508339.1 ENST00000510145.1 ENST00000662437.1 |
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| CDS CCA 90 bp | ATCTCCAAACAGCCCTTCAGAACAGTTTCTGCCATCCAGACCACCTaGGTCCTGCCTACCCAGAGACTTTTCTGCTTTCCTCTTGAATGC | + |
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Preference number: 5 (lower is better) Translates to: ISKQPFRTVSAIQTT*VLPTQRLFCFPLEC Trigger: GCATTCAAGAGGAAAGCAGAAAAGTCTCTGGGTAGGCAGGACCCAGGTGGTCTGGATGGCAGAAACTGTTCTGAAGGGCTGTTTGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660106.1 |
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| CDS GCA 90 bp | CCAATTGCAGGGTCACCCCGTGGACAACTTCTTCTTTCTCTCCTGTaGAACTCTCTTCTTGCATCCCCAGTGCTTGGAGACTTTAATTCC | + |
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Preference number: 5 (lower is better) Translates to: PIAGSPRGQLLLSLL*NSLLASPVLGDFNS Trigger: GGAATTAAAGTCTCCAAGCACTGGGGATGCAAGAAGAGAGTTGCACAGGAGAGAAAGAAGAAGTTGTCCACGGGGTGACCCTGCAATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000505527.5 ENST00000510145.1 ENST00000513815.1 ENST00000658823.1 ENST00000660106.1 ENST00000662437.1 ENST00000669204.1 ENST00000670038.1 |
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| CDS CCA 90 bp | TGCACATATCCACATGCATTTCCCTCCAATTGCAGGGTCACCCCGTaGACAACTTCTTCTTTCTCTCCTGTGCAACTCTCTTCTTGCATC | + |
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Preference number: 5 (lower is better) Translates to: CTYPHAFPSNCRVTP*TTSSFSPVQLSSCI Trigger: GATGCAAGAAGAGAGTTGCACAGGAGAGAAAGAAGAAGTTGTCCACGGGGTGACCCTGCAATTGGAGGGAAATGCATGTGGATATGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000505527.5 ENST00000510145.1 ENST00000513815.1 ENST00000658823.1 ENST00000660106.1 ENST00000662437.1 ENST00000669204.1 ENST00000670038.1 |
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| CDS TCA 90 bp | AGACAGGGAATTTCCAGTTCATGTGATTCTGATCAAGCAACCTCGTaGTGGGCTGACTCCCAGCTTCCTTTTTGGACTGTTCCAGATGCT | + |
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Preference number: 5 (lower is better) Translates to: RQGISSSCDSDQATS*WADSQLPFWTVPDA Trigger: AGCATCTGGAACAGTCCAAAAAGGAAGCTGGGAGTCAGCCCATCACGAGGTTGCTTGATCAGAATCACATGAACTGGAAATTCCCTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000505527.5 ENST00000669204.1 |
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| CDS CCA 90 bp | CAGAGGAAGAGGAATACAGAAAAGTCCCAGAGACATGGTATATCATaGCACCATCTCTTCTCTACCTGCACTCCTAAGCTTTGGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: QRKRNTEKSQRHGIS*HHLFSTCTPKLWVR Trigger: CCTGACCCAAAGCTTAGGAGTGCAGGTAGAGAAGAGATGGTGCCATGATATACCATGTCTCTGGGACTTTTCTGTATTCCTCTTCCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000658823.1 ENST00000660106.1 ENST00000662437.1 ENST00000669204.1 ENST00000670038.1 |
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| CDS GCA 90 bp | ATATTACTATATTCTTATCTCCAAACAGCCCTTCAGAACAGTTTCTaGCATCCAGACCACCTGGGTCCTGCCTACCCAGAGACTTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: ILLYSYLQTALQNSF*HPDHLGPAYPETFL Trigger: CAGAAAAGTCTCTGGGTAGGCAGGACCCAGGTGGTCTGGATGGCAGAAACTGTTCTGAAGGGCTGTTTGGAGATAAGAATATAGTAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660106.1 |
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| CDS CCA 90 bp | GAATTTCCAGTTCAGATGCTACAGTTCCTCCTCATTGCTCCCACATaGATGTTCACTGTTTATTCAGAATTGAGCCAAAAGCCCACGGGA | + |
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Preference number: 5 (lower is better) Translates to: EFPVQMLQFLLIAPT*MFTVYSELSQKPTG Trigger: TCCCGTGGGCTTTTGGCTCAATTCTGAATAAACAGTGAACATCCATGTGGGAGCAATGAGGAGGAACTGTAGCATCTGAACTGGAAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508339.1 |
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| CDS TCA 90 bp | GGTGGCTTTGCATCCCTTATTTTACCTAACCCTCATTCTTGTAAATaGTCACTAAGGCTTCACTTCCTAGACTCCCTGCACATATCCACA | + |
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Preference number: 5 (lower is better) Translates to: GGFASLILPNPHSCK*SLRLHFLDSLHIST Trigger: TGTGGATATGTGCAGGGAGTCTAGGAAGTGAAGCCTTAGTGATCATTTACAAGAATGAGGGTTAGGTAAAATAAGGGATGCAAAGCCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000505527.5 ENST00000510145.1 ENST00000658823.1 ENST00000660106.1 ENST00000662437.1 ENST00000669204.1 ENST00000670038.1 |
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| CDS GCA 90 bp | CAGCTTCCTTTTTGGACTGTTCCAGATGCTACAGTTCCTCCTCATTaGTCCCACATGGATGTTCACTGTTTATTCAGAATTGAGCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: QLPFWTVPDATVPPH*SHMDVHCLFRIEPK Trigger: TTTTGGCTCAATTCTGAATAAACAGTGAACATCCATGTGGGAGCAATGAGGAGGAACTGTAGCATCTGGAACAGTCCAAAAAGGAAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000505527.5 ENST00000669204.1 |
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| CDS CCA 90 bp | GAATTTCCAGTTCAGATGCTACAGTTCCTCCTCATTGCTCCCACATaGATGTTCACTGTTTATTCAGAATTGAGCCAAAAGCCCATTTGG | + |
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Preference number: 5 (lower is better) Translates to: EFPVQMLQFLLIAPT*MFTVYSELSQKPIW Trigger: CCAAATGGGCTTTTGGCTCAATTCTGAATAAACAGTGAACATCCATGTGGGAGCAATGAGGAGGAACTGTAGCATCTGAACTGGAAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658823.1 |
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| CDS GCA 90 bp | AACTTCTTCTTTCTCTCCTGTGCAACTCTCTTCTTGCATCCCCAGTaGTTGGAGACTTTAATTCCTTTTCCTCTTCTCTTCTTGGATAGT | + |
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Preference number: 5 (lower is better) Translates to: NFFFLSCATLFLHPQ*LETLIPFPLLFLDS Trigger: ACTATCCAAGAAGAGAAGAGGAAAAGGAATTAAAGTCTCCAAGCACTGGGGATGCAAGAAGAGAGTTGCACAGGAGAGAAAGAAGAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000505527.5 ENST00000510145.1 ENST00000513815.1 ENST00000658823.1 ENST00000660106.1 ENST00000662437.1 ENST00000669204.1 ENST00000670038.1 |
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| CDS CCA 90 bp | TTGAGATACACAATGGATTATCCTAGTTCACTAGTAGAGACAATGTaGAATACACCTGGAAAACACGGGAGGAGACAAGATGGCCGAATA | + |
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Preference number: 5 (lower is better) Translates to: LRYTMDYPSSLVETM*NTPGKHGRRQDGRI Trigger: TATTCGGCCATCTTGTCTCCTCCCGTGTTTTCCAGGTGTATTCCACATTGTCTCTACTAGTGAACTAGGATAATCCATTGTGTATCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513815.1 |
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| CDS CCA 90 bp | TTGAGATACACAATGGATTATCCTAGTTCACTAGTAGAGACAATGTaGAATACACCTGGAAAACTGAGTCACATACATAGAGGAAACGTG | + |
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Preference number: 5 (lower is better) Translates to: LRYTMDYPSSLVETM*NTPGKLSHIHRGNV Trigger: CACGTTTCCTCTATGTATGTGACTCAGTTTTCCAGGTGTATTCCACATTGTCTCTACTAGTGAACTAGGATAATCCATTGTGTATCTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660106.1 |
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| CDS CCA 90 bp | GGGTTTTCTAGACATAGAATGATGTTGCCTGCAAACAGGGATAATTaGACTTCCTCTCTTCCTATTTGGATGCACTTTATTTCTTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: GFSRHRMMLPANRDN*TSSLPIWMHFISFS Trigger: AGAGAAAGAAATAAAGTGCATCCAAATAGGAAGAGAGGAAGTCCAATTATCCCTGTTTGCAGGCAACATCATTCTATGTCTAGAAAACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660106.1 |
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| CDS CCA 90 bp | GTAGCAATTGTGAATGAAATTGCGTTCCTGATTTGGCTCTCAGCTTaGCTGTTGTTGATGTACAGGAATACTAGTGATTTTCATTCATTG | + |
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Preference number: 5 (lower is better) Translates to: VAIVNEIAFLIWLSA*LLLMYRNTSDFHSL Trigger: CAATGAATGAAAATCACTAGTATTCCTGTACATCAACAACAGCCAAGCTGAGAGCCAAATCAGGAACGCAATTTCATTCACAATTGCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660106.1 |
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| CDS GCA 72 bp | CTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTGCGTaGGCGCACCATGCGCGAGTCGAAGCAGGGCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LGSARQWAQVSA*AHHARVEAGRG Trigger: GCCTCGCCCTGCTTCGACTCGCGCATGGTGCGCGCACGCACTGACCTGCGCCCACTGTCTGGCACTCCCTAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508339.1 ENST00000510145.1 ENST00000662437.1 |
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| CDS GCA 72 bp | CTCACTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTaGGTGCGCGCACCATGCGCGAGTCGAAGCAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: LTRECQTVGAGQ*VRAPCASRSRA Trigger: CGCCCTGCTTCGACTCGCGCATGGTGCGCGCACGCACTGACCTGCGCCCACTGTCTGGCACTCCCTAGTGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508339.1 ENST00000510145.1 ENST00000662437.1 |
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| CDS CCA 72 bp | TTAGGTAAACAAAGCAGCAGGGAAGCTCCAACTGGGTaGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LGKQSSREAPTG*SPPQLKEACLP Trigger: AGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTGGAGCTTCCCTGCTGCTTTGTTTACCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662437.1 |
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| CDS TCA 72 bp | CCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTaGGCGACGCAGAAGACTGGTGATTTCTGCATTTCC | + |
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Preference number: 6 (lower is better) Translates to: PNRNSSGLQLPA*ATQKTGDFCIS Trigger: GGAAATGCAGAAATCACCAGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508339.1 ENST00000510145.1 ENST00000662437.1 |
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| CDS GCA 72 bp | AGGCTTCACTTCCTAGACTCCCTGCACATATCCACATaGATTTCCCTCCAATTGCAGGGTCACCCCGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: RLHFLDSLHIST*ISLQLQGHPVD Trigger: GTCCACGGGGTGACCCTGCAATTGGAGGGAAATGCATGTGGATATGTGCAGGGAGTCTAGGAAGTGAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000505527.5 ENST00000510145.1 ENST00000513815.1 ENST00000658823.1 ENST00000660106.1 ENST00000662437.1 ENST00000669204.1 ENST00000670038.1 |
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| CDS TCA 72 bp | GCGACGCAGAAGACTGGTGATTTCTGCATTTCCATCTaGGGTACCGGGTTCATCTCACTAGGGAGTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: ATQKTGDFCISI*GTGFISLGSAR Trigger: TCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCAGTCTTCTGCGTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508339.1 ENST00000510145.1 ENST00000662437.1 |
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| CDS TCA 72 bp | TCTACAGCTCCCAGCGTGAGCGACGCAGAAGACTGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: STAPSVSDAEDW*FLHFHLRYRVH Trigger: ATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCAGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508339.1 ENST00000510145.1 ENST00000662437.1 |
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| CDS CAA 90 bp | CACTTCCTAGACTCCCTGCACATATCCACATGCATTTCCCTCCAATaGCAGGGTCACCCCGTGGACAACTTCTTCTTTCTCTCCTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: HFLDSLHISTCISLQ*QGHPVDNFFFLSCA Trigger: TGCACAGGAGAGAAAGAAGAAGTTGTCCACGGGGTGACCCTGCAATTGGAGGGAAATGCATGTGGATATGTGCAGGGAGTCTAGGAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000505527.5 ENST00000510145.1 ENST00000513815.1 ENST00000658823.1 ENST00000660106.1 ENST00000662437.1 ENST00000669204.1 ENST00000670038.1 |
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| CDS CAA 72 bp | GACTCCCTGCACATATCCACATGCATTTCCCTCCAATaGCAGGGTCACCCCGTGGACAACTTCTTCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: DSLHISTCISLQ*QGHPVDNFFFL Trigger: GAGAAAGAAGAAGTTGTCCACGGGGTGACCCTGCAATTGGAGGGAAATGCATGTGGATATGTGCAGGGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000505527.5 ENST00000510145.1 ENST00000513815.1 ENST00000658823.1 ENST00000660106.1 ENST00000662437.1 ENST00000669204.1 ENST00000670038.1 |
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| CDS TCA 72 bp | TTGCTCCCACATGGATGTTCACTGTTTATTCAGAATTaGGCCAAAAGCCCACGGGAGGAGACAAGATGGCCG | + |
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Preference number: 6 (lower is better) Translates to: LLPHGCSLFIQN*AKSPREETRWP Trigger: CGGCCATCTTGTCTCCTCCCGTGGGCTTTTGGCTCAATTCTGAATAAACAGTGAACATCCATGTGGGAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505527.5 ENST00000508339.1 |
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| CDS GCA 72 bp | GTCAGTCACAGCTATTCTCTTCCCATCTGCTTCCAGTaGTGGTTAAGGGGAGACAGGGAATTTCCAGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: VSHSYSLPICFQ*WLRGDREFPVQ Trigger: CTGAACTGGAAATTCCCTGTCTCCCCTTAACCAGCACTGGAAGCAGATGGGAAGAGAATAGCTGTGACTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508339.1 ENST00000658823.1 |
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| CDS GCA 72 bp | GTCAGTCACAGCTATTCTCTTCCCATCTGCTTCCAGTaGTGGTTAAGGGGAGACAGGGAATTTCCAGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: VSHSYSLPICFQ*WLRGDREFPVH Trigger: GTGAACTGGAAATTCCCTGTCTCCCCTTAACCAGCACTGGAAGCAGATGGGAAGAGAATAGCTGTGACTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000510145.1 ENST00000662437.1 |
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| CDS GCA 72 bp | GTCAGTCACAGCTATTCTCTTCCCATCTGCTTCCAGTaGTGGTTAAGGGGAGACAGGGAATTTCCAGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: VSHSYSLPICFQ*WLRGDREFPVH Trigger: ATGAACTGGAAATTCCCTGTCTCCCCTTAACCAGCACTGGAAGCAGATGGGAAGAGAATAGCTGTGACTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000505527.5 ENST00000513815.1 ENST00000660106.1 ENST00000669204.1 ENST00000670038.1 |
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| CDS CAA 72 bp | ATTGCTCCCACATGGATGTTCACTGTTTATTCAGAATaGAGCCAAAAGCCCACGGGAGGAGACAAGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: IAPTWMFTVYSE*SQKPTGGDKMA Trigger: GGCCATCTTGTCTCCTCCCGTGGGCTTTTGGCTCAATTCTGAATAAACAGTGAACATCCATGTGGGAGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505527.5 ENST00000508339.1 |
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| CDS TCA 72 bp | ACACTGTGCCCTAGATTTAAGGAACTTACATTCCTGTaGGCAGGCCAACAGGGTTCCGGAAAAACTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: TLCPRFKELTFL*AGQQGSGKTLP Trigger: AGGAAGAGTTTTTCCGGAACCCTGTTGGCCTGCTCACAGGAATGTAAGTTCCTTAAATCTAGGGCACAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000658823.1 ENST00000662437.1 ENST00000669204.1 ENST00000670038.1 |
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| CDS TCA 72 bp | ATTTCCAGTTCATGTGATTCTGATCAAGCAACCTCGTaGTGGGCTGACTCCCAGCTTCCTTTTTGGACTGTT | + |
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Preference number: 6 (lower is better) Translates to: ISSSCDSDQATS*WADSQLPFWTV Trigger: AACAGTCCAAAAAGGAAGCTGGGAGTCAGCCCATCACGAGGTTGCTTGATCAGAATCACATGAACTGGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000505527.5 ENST00000669204.1 |
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| CDS CAA 72 bp | TGTCTGATTGCCCTGGCAAGAACTTCCAATACTATGTaGAATAGGAGTGGTGAGAGAGGGCATCCTTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: CLIALARTSNTM*NRSGERGHPCL Trigger: AAGACAAGGATGCCCTCTCTCACCACTCCTATTCAACATAGTATTGGAAGTTCTTGCCAGGGCAATCAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660106.1 |
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| CDS CCA 72 bp | CCTTCTCCCAGCAATTATCAGACCTTTGGCCTCTTTTaGGGTCTTGAAAAACTTTATGGTCTCCCACTTGTA | + |
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Preference number: 6 (lower is better) Translates to: PSPSNYQTFGLF*GLEKLYGLPLV Trigger: TACAAGTGGGAGACCATAAAGTTTTTCAAGACCCCAAAAGAGGCCAAAGGTCTGATAATTGCTGGGAGAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000505527.5 ENST00000508339.1 ENST00000510145.1 ENST00000513815.1 ENST00000658823.1 ENST00000660106.1 ENST00000662437.1 ENST00000669204.1 ENST00000670038.1 |
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| CDS CCA 72 bp | AGGAATACAGAAAAGTCCCAGAGACATGGTATATCATaGCACCATCTCTTCTCTACCTGCACTCCTAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: RNTEKSQRHGIS*HHLFSTCTPKL Trigger: AAGCTTAGGAGTGCAGGTAGAGAAGAGATGGTGCCATGATATACCATGTCTCTGGGACTTTTCTGTATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000658823.1 ENST00000660106.1 ENST00000662437.1 ENST00000669204.1 ENST00000670038.1 |
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| CDS TCA 72 bp | TTGCTCCCACATGGATGTTCACTGTTTATTCAGAATTaGGCCAAAAGCCCATTTGGAGAACTTCCAGGATGT | + |
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Preference number: 6 (lower is better) Translates to: LLPHGCSLFIQN*AKSPFGELPGC Trigger: ACATCCTGGAAGTTCTCCAAATGGGCTTTTGGCTCAATTCTGAATAAACAGTGAACATCCATGTGGGAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658823.1 ENST00000669204.1 |
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| CDS TCA 72 bp | TTTGGGCCACAACTATGGGGTTTTCTAGACATAGAATaGTGTTGCCTGCAAACAGGGATAATTGGACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: FGPQLWGFLDIE*CCLQTGIIGLP Trigger: AGGAAGTCCAATTATCCCTGTTTGCAGGCAACATCATTCTATGTCTAGAAAACCCCATAGTTGTGGCCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660106.1 |
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| CDS CAA 72 bp | GCCACAACTATGGGGTTTTCTAGACATAGAATGATGTaGCCTGCAAACAGGGATAATTGGACTTCCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: ATTMGFSRHRMM*PANRDNWTSSL Trigger: AAGAGAGGAAGTCCAATTATCCCTGTTTGCAGGCAACATCATTCTATGTCTAGAAAACCCCATAGTTGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660106.1 |
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| CDS CCA 72 bp | ACAATGGATTATCCTAGTTCACTAGTAGAGACAATGTaGAATACACCTGGAAAACACGGGAGGAGACAAGAT | + |
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Preference number: 6 (lower is better) Translates to: TMDYPSSLVETM*NTPGKHGRRQD Trigger: ATCTTGTCTCCTCCCGTGTTTTCCAGGTGTATTCCACATTGTCTCTACTAGTGAACTAGGATAATCCATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513815.1 |
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| CDS CAA 72 bp | TTTAAAGTCTTTAAACTGATTCTCCTGTCCCTAGCTTaGTACATGGACATCCCAATTCACCCTGTGCTCTAC | + |
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Preference number: 6 (lower is better) Translates to: FKVFKLILLSLA*YMDIPIHPVLY Trigger: GTAGAGCACAGGGTGAATTGGGATGTCCATGTACAAAGCTAGGGACAGGAGAATCAGTTTAAAGACTTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000658823.1 ENST00000660106.1 ENST00000662437.1 ENST00000669204.1 ENST00000670038.1 |
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| CDS CCA 72 bp | GTGAATGAAATTGCGTTCCTGATTTGGCTCTCAGCTTaGCTGTTGTTGATGTACAGGAATACTAGTGATTTT | + |
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Preference number: 6 (lower is better) Translates to: VNEIAFLIWLSA*LLLMYRNTSDF Trigger: AAAATCACTAGTATTCCTGTACATCAACAACAGCCAAGCTGAGAGCCAAATCAGGAACGCAATTTCATTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660106.1 |
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| CDS CCA 72 bp | TTTGTAGCAATTGTGAATGAAATTGCGTTCCTGATTTaGCTCTCAGCTTGGCTGTTGTTGATGTACAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: FVAIVNEIAFLI*LSAWLLLMYRN Trigger: ATTCCTGTACATCAACAACAGCCAAGCTGAGAGCCAAATCAGGAACGCAATTTCATTCACAATTGCTACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660106.1 |
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| CDS CAA 72 bp | ATTGCGTTCCTGATTTGGCTCTCAGCTTGGCTGTTGTaGATGTACAGGAATACTAGTGATTTTCATTCATTG | + |
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Preference number: 6 (lower is better) Translates to: IAFLIWLSAWLL*MYRNTSDFHSL Trigger: CAATGAATGAAAATCACTAGTATTCCTGTACATCAACAACAGCCAAGCTGAGAGCCAAATCAGGAACGCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660106.1 |
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| CDS CAA 72 bp | GAAATTGCGTTCCTGATTTGGCTCTCAGCTTGGCTGTaGTTGATGTACAGGAATACTAGTGATTTTCATTCA | + |
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Preference number: 6 (lower is better) Translates to: EIAFLIWLSAWL*LMYRNTSDFHS Trigger: TGAATGAAAATCACTAGTATTCCTGTACATCAACAACAGCCAAGCTGAGAGCCAAATCAGGAACGCAATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660106.1 |
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| CDS CAA 90 bp | GTGAATGAAATTGCGTTCCTGATTTGGCTCTCAGCTTGGCTGTTGTaGATGTACAGGAATACTAGTGATTTTCATTCATTGGTTTTATAT | + |
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Preference number: 6 (lower is better) Translates to: VNEIAFLIWLSAWLL*MYRNTSDFHSLVLY Trigger: ATATAAAACCAATGAATGAAAATCACTAGTATTCCTGTACATCAACAACAGCCAAGCTGAGAGCCAAATCAGGAACGCAATTTCATTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660106.1 |
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| CDS CAA 90 bp | ATTGTGAATGAAATTGCGTTCCTGATTTGGCTCTCAGCTTGGCTGTaGTTGATGTACAGGAATACTAGTGATTTTCATTCATTGGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: IVNEIAFLIWLSAWL*LMYRNTSDFHSLVL Trigger: TAAAACCAATGAATGAAAATCACTAGTATTCCTGTACATCAACAACAGCCAAGCTGAGAGCCAAATCAGGAACGCAATTTCATTCACAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660106.1 |
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