Pregenerated sensors for LINC00486 (Homo sapiens)
Ensembl gene IDs: ENSG00000230876, ENSG00000236854Ensembl transcript IDs: ENST00000414054.5, ENST00000424364.6, ENST00000435075.1, ENST00000440786.2, ENST00000648808.2, ENST00000654101.1, ENST00000654895.1, ENST00000655718.1, ENST00000657199.1, ENST00000659406.1, ENST00000659655.1, ENST00000660594.1, ENST00000663506.1, ENST00000663645.1, ENST00000663772.1, ENST00000666151.1, ENST00000666737.1, ENST00000671158.1
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACCGGTCTGCTGGTCACTCGACTGGGTCCCAGCATGGTGTGTGGATaGAGTGAGGGCTCCAGAGCCAGGCTACCCGGTTCCAAGCCCCAC | + |
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Preference number: 5 (lower is better) Translates to: TGLLVTRLGPSMVCG*SEGSRARLPGSKPH Trigger: GTGGGGCTTGGAACCGGGTAGCCTGGCTCTGGAGCCCTCACTCCATCCACACACCATGCTGGGACCCAGTCGAGTGACCAGCAGACCGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000414054.5 ENST00000424364.6 ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
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| CDS CCA 90 bp | CTTCTGCCGGCTGGGATGCAGGCTGCAGCGTTGCCCAAGAGTCAGTaGGCAAATGGTGCTCCTCCCAGCTTGGCTACTCGGACCCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: LLPAGMQAAALPKSQ*ANGAPPSLATRTQG Trigger: TCCCTGGGTCCGAGTAGCCAAGCTGGGAGGAGCACCATTTGCCCACTGACTCTTGGGCAACGCTGCAGCCTGCATCCCAGCCGGCAGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS GCA 90 bp | GTGGTCATGCCCAAGTCTAGTTTCTGGGCCTGCAAGTCATGGAAATaGCCCTGGGAGGCAGCCGTCCAGCTGTCCCCCTCAGCAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: VVMPKSSFWACKSWK*PWEAAVQLSPSAAR Trigger: CCTGGCTGCTGAGGGGGACAGCTGGACGGCTGCCTCCCAGGGGCATTTCCATGACTTGCAGGCCCAGAAACTAGACTTGGGCATGACCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000414054.5 |
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| CDS GCA 90 bp | GGCAAGGCTGACAGCTCTCAGGGGGCCTGTGTGGGTTCTTTCCAGTaGACACATTCACTCTGGAGCAAGCCTCAGCATGTGGACCGGGGA | + |
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Preference number: 5 (lower is better) Translates to: GKADSSQGACVGSFQ*THSLWSKPQHVDRG Trigger: TCCCCGGTCCACATGCTGAGGCTTGCTCCAGAGTGAATGTGTGCACTGGAAAGAACCCACACAGGCCCCCTGAGAGCTGTCAGCCTTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS GCA 90 bp | TGGGATGCAGGCTGCAGCGTTGCCCAAGAGTCAGTGGGCAAATGGTaGTCCTCCCAGCTTGGCTACTCGGACCCAGGGATCTCACAGAAG | + |
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Preference number: 5 (lower is better) Translates to: WDAGCSVAQESVGKW*SSQLGYSDPGISQK Trigger: CTTCTGTGAGATCCCTGGGTCCGAGTAGCCAAGCTGGGAGGAGCACCATTTGCCCACTGACTCTTGGGCAACGCTGCAGCCTGCATCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS GCA 90 bp | GTTCCTTCCGTGGCTGTAAACTCAGCTGTGATACCACCTGCCTTCTaGCGGCTGGGATGCAGGCTGCAGCGTTGCCCAAGAGTCAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: VPSVAVNSAVIPPAF*RLGCRLQRCPRVSG Trigger: CCCACTGACTCTTGGGCAACGCTGCAGCCTGCATCCCAGCCGGCAGAAGGCAGGTGGTATCACAGCTGAGTTTACAGCCACGGAAGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS GCA 90 bp | GCTGTAAACTCAGCTGTGATACCACCTGCCTTCTGCCGGCTGGGATaGAGGCTGCAGCGTTGCCCAAGAGTCAGTGGGCAAATGGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: AVNSAVIPPAFCRLG*RLQRCPRVSGQMVL Trigger: GAGCACCATTTGCCCACTGACTCTTGGGCAACGCTGCAGCCTGCATCCCAGCCGGCAGAAGGCAGGTGGTATCACAGCTGAGTTTACAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS CCA 90 bp | AACTCTGTGGTCATGCCCAAGTCTAGTTTCTGGGCCTGCAAGTCATaGAAATGCCCCTGGGAGGCAGCCGTCCAGCTGTCCCCCTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: NSVVMPKSSFWACKS*KCPWEAAVQLSPSA Trigger: TGCTGAGGGGGACAGCTGGACGGCTGCCTCCCAGGGGCATTTCCATGACTTGCAGGCCCAGAAACTAGACTTGGGCATGACCACAGAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000414054.5 |
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| CDS GCA 90 bp | TACAGTGGTTCCTTCCGTGGCTGTAAACTCAGCTGTGATACCACCTaGCTTCTGCCGGCTGGGATGCAGGCTGCAGCGTTGCCCAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: YSGSFRGCKLSCDTT*LLPAGMQAAALPKS Trigger: ACTCTTGGGCAACGCTGCAGCCTGCATCCCAGCCGGCAGAAGGCAGGTGGTATCACAGCTGAGTTTACAGCCACGGAAGGAACCACTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS CCA 90 bp | TCTCAGGGGGCCTGTGTGGGTTCTTTCCAGTGCACACATTCACTCTaGAGCAAGCCTCAGCATGTGGACCGGGGAGAGAGACTCCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: SQGACVGSFQCTHSL*SKPQHVDRGERLPL Trigger: CAAAGGGAGTCTCTCTCCCCGGTCCACATGCTGAGGCTTGCTCCAGAGTGAATGTGTGCACTGGAAAGAACCCACACAGGCCCCCTGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS CCA 90 bp | TCTCACAGAAGCCTGGCAAGGCTGACAGCTCTCAGGGGGCCTGTGTaGGTTCTTTCCAGTGCACACATTCACTCTGGAGCAAGCCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: SHRSLARLTALRGPV*VLSSAHIHSGASLS Trigger: GCTGAGGCTTGCTCCAGAGTGAATGTGTGCACTGGAAAGAACCCACACAGGCCCCCTGAGAGCTGTCAGCCTTGCCAGGCTTCTGTGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS TCA 90 bp | GCATGGCTGGGGAGGCCTCAGGAAAGTTACAATCACGGCAGAAGGTaGAGGGGAAGCAAGGCACCTTCTTCAGAAGGCGGCAGGAATGAG | + |
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Preference number: 5 (lower is better) Translates to: AWLGRPQESYNHGRR*RGSKAPSSEGGRNE Trigger: CTCATTCCTGCCGCCTTCTGAAGAAGGTGCCTTGCTTCCCCTTCACCTTCTGCCGTGATTGTAACTTTCCTGAGGCCTCCCCAGCCATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
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| CDS GCA 90 bp | TCCATCAAGAACTCTGTGGTCATGCCCAAGTCTAGTTTCTGGGCCTaGAAGTCATGGAAATGCCCCTGGGAGGCAGCCGTCCAGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: SIKNSVVMPKSSFWA*KSWKCPWEAAVQLS Trigger: GGACAGCTGGACGGCTGCCTCCCAGGGGCATTTCCATGACTTGCAGGCCCAGAAACTAGACTTGGGCATGACCACAGAGTTCTTGATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414054.5 |
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| CDS GCA 90 bp | TCTGACTGTACCCTTGGTGCTCAGGACATTTCTCGCCTGCCCGGATaGCATCTCTCACTGCTGTCTTCTCAAACTGCTTCTCCTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SDCTLGAQDISRLPG*HLSLLSSQTASPPP Trigger: TGGAGGAGGAGAAGCAGTTTGAGAAGACAGCAGTGAGAGATGGCATCCGGGCAGGCGAGAAATGTCCTGAGCACCAAGGGTACAGTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654895.1 ENST00000660594.1 ENST00000671158.1 |
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| CDS GCA 90 bp | CTTCATGCTGCCTCCATGACCACTGACATTTCTCGCCTGCCCGGATaGCATCTCTCACTGCTGTCTTCTCAAACTGCTTCTCCTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: LHAASMTTDISRLPG*HLSLLSSQTASPPP Trigger: TGGAGGAGGAGAAGCAGTTTGAGAAGACAGCAGTGAGAGATGGCATCCGGGCAGGCGAGAAATGTCAGTGGTCATGGAGGCAGCATGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666151.1 |
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| CDS TCA 90 bp | CTCTTAGCCTCCGCTGCACTTGACACCATCAGACTGTGTTCTTCCTaGATGCCCTCCTTTCTGGGCCTCCATAGGGTGCTGCATTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: LLASAALDTIRLCSS*MPSFLGLHRVLHFP Trigger: AGGAAAATGCAGCACCCTATGGAGGCCCAGAAAGGAGGGCATTCAGGAAGAACACAGTCTGATGGTGTCAAGTGCAGCGGAGGCTAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000440786.2 ENST00000654895.1 ENST00000655718.1 ENST00000659406.1 ENST00000659655.1 ENST00000660594.1 ENST00000663506.1 ENST00000666151.1 ENST00000666737.1 ENST00000671158.1 |
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| CDS TCA 90 bp | TTCACCCCGTTGCCTCTGGATTCTGTCTCTGTTAATCCGTTCCGATaGGTCTTGCCCGACTTCTGCCCCAACCAACCTCAGCTAAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: FTPLPLDSVSVNPFR*VLPDFCPNQPQLKS Trigger: GGACTTTAGCTGAGGTTGGTTGGGGCAGAAGTCGGGCAAGACTCATCGGAACGGATTAACAGAGACAGAATCCAGAGGCAACGGGGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
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| CDS GCA 90 bp | CCATCTCCCTCTTCGTCTCTGTCTCTAAGAGCCTTGCCAGGTTTCTaGAGCCAACAGTCCCTTCATGCTGCCTCCATGACCACTGACATT | + |
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Preference number: 5 (lower is better) Translates to: PSPSSSLSLRALPGF*SQQSLHAASMTTDI Trigger: AATGTCAGTGGTCATGGAGGCAGCATGAAGGGACTGTTGGCTGCAGAAACCTGGCAAGGCTCTTAGAGACAGAGACGAAGAGGGAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666151.1 |
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| CDS CCA 90 bp | CACTTGACACCATCAGACTGTGTTCTTCCTGAATGCCCTCCTTTCTaGGCCTCCATAGGGTGCTGCATTTTCCTGAGTGCCTTCCTCACC | + |
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Preference number: 5 (lower is better) Translates to: HLTPSDCVLPECPPF*ASIGCCIFLSAFLT Trigger: GGTGAGGAAGGCACTCAGGAAAATGCAGCACCCTATGGAGGCCCAGAAAGGAGGGCATTCAGGAAGAACACAGTCTGATGGTGTCAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000440786.2 ENST00000654895.1 ENST00000655718.1 ENST00000659406.1 ENST00000659655.1 ENST00000660594.1 ENST00000663506.1 ENST00000666151.1 ENST00000666737.1 ENST00000671158.1 |
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| CDS TCA 90 bp | GAACTTGGCTCAGGCTCTGAAAGGCTTCTATCCTTTCCTGCCTCATaGGTTCAGCATGGCTGGGGAGGCCTCAGGAAAGTTACAATCACG | + |
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Preference number: 5 (lower is better) Translates to: ELGSGSERLLSFPAS*VQHGWGGLRKVTIT Trigger: CGTGATTGTAACTTTCCTGAGGCCTCCCCAGCCATGCTGAACTCATGAGGCAGGAAAGGATAGAAGCCTTTCAGAGCCTGAGCCAAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648808.2 |
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| CDS GCA 90 bp | ATGCCCTCCTTTCTGGGCCTCCATAGGGTGCTGCATTTTCCTGAGTaGCTTCCTCACCAGAAGTTCTGGAGGGCATCATTTCTGGATTCA | + |
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Preference number: 5 (lower is better) Translates to: MPSFLGLHRVLHFPE*LPHQKFWRASFLDS Trigger: TGAATCCAGAAATGATGCCCTCCAGAACTTCTGGTGAGGAAGGCACTCAGGAAAATGCAGCACCCTATGGAGGCCCAGAAAGGAGGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000440786.2 ENST00000654895.1 ENST00000655718.1 ENST00000659406.1 ENST00000659655.1 ENST00000660594.1 ENST00000663506.1 ENST00000666151.1 ENST00000666737.1 ENST00000671158.1 |
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| CDS GCA 90 bp | GTGGGGTGTGGGCAGCTTTTTCAGAGATGGAGTAAGTGTCCTCTGTaGTTCTGTGAGGAGGAACTTGGCTCAGGCTCTGAAAGGCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: VGCGQLFQRWSKCPL*FCEEELGSGSERLL Trigger: TAGAAGCCTTTCAGAGCCTGAGCCAAGTTCCTCCTCACAGAAGCACAGAGGACACTTACTCCATCTCTGAAAAAGCTGCCCACACCCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
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| CDS TCA 90 bp | CTGACTGTACCCTTGGTGCTCAGGACTTTGAATCTGCACTTCCCGTaGCTGCTGGGTTTCCTAAACCACAGAACTCCTCATTGTCCCATC | + |
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Preference number: 5 (lower is better) Translates to: LTVPLVLRTLNLHFP*LLGFLNHRTPHCPI Trigger: GATGGGACAATGAGGAGTTCTGTGGTTTAGGAAACCCAGCAGTCACGGGAAGTGCAGATTCAAAGTCCTGAGCACCAAGGGTACAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666151.1 |
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| CDS GCA 90 bp | GTCTGTGGTTTGGGCATCTTCAGTCCATCAAGAACTCTGTGGTCATaGCCAAGTCTAGTTTCTGGGCCTGCAAGTCATGGAAATGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: VCGLGIFSPSRTLWS*PSLVSGPASHGNAP Trigger: AGGGGCATTTCCATGACTTGCAGGCCCAGAAACTAGACTTGGGCATGACCACAGAGTTCTTGATGGACTGAAGATGCCCAAACCACAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414054.5 |
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| CDS GCA 90 bp | GTACTTTTGTCCTGGATGACCTCTCTTCCCTTTGCATTTCTCGCCTaGCCGGATGCCATCTCTCACTGCTGTCTTCTCAAACTGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: VLLSWMTSLPFAFLA*PDAISHCCLLKLLL Trigger: GAGAAGCAGTTTGAGAAGACAGCAGTGAGAGATGGCATCCGGGCAGGCGAGAAATGCAAAGGGAAGAGAGGTCATCCAGGACAAAAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000440786.2 ENST00000655718.1 ENST00000659406.1 ENST00000659655.1 ENST00000663506.1 |
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| CDS TCA 90 bp | CAAGCCTCAGCATGTGGACCGGGGAGAGAGACTCCCTTTGGACAGTaGGCTCTTGTTAGCTGTGCAATCGAAGACAAGTTGTTTAACCTT | + |
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Preference number: 5 (lower is better) Translates to: QASACGPGRETPFGQ*ALVSCAIEDKLFNL Trigger: AAGGTTAAACAACTTGTCTTCGATTGCACAGCTAACAAGAGCTCACTGTCCAAAGGGAGTCTCTCTCCCCGGTCCACATGCTGAGGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS TCA 90 bp | CCCTCCTTGTCAGCAAAGAGATCCTTCTGTAGTATCCTTGACGCATaGCATCTAGTTAGCATCCTTCTGCGATGCCTCTGCCTTTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: PSLSAKRSFCSILDA*HLVSILLRCLCLCV Trigger: CACACAAAGGCAGAGGCATCGCAGAAGGATGCTAACTAGATGTCATGCGTCAAGGATACTACAGAAGGATCTCTTTGCTGACAAGGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS TCA 90 bp | CACAGTTTCAAACCAGCCAACGTGGAGACAATCTTCAGTACTTGCTaGAAATGTGCTTTCACTGTAAGCTTCAGTGCCCTGGAGCAGTGC | + |
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Preference number: 5 (lower is better) Translates to: HSFKPANVETIFSTC*KCAFTVSFSALEQC Trigger: GCACTGCTCCAGGGCACTGAAGCTTACAGTGAAAGCACATTTTCAGCAAGTACTGAAGATTGTCTCCACGTTGGCTGGTTTGAAACTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424364.6 ENST00000663645.1 |
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| CDS TCA 90 bp | CTCACCAGAAGTTCTGGAGGGCATCATTTCTGGATTCATCATTTCTaGCTGTACCCTTGGTGCTCAGGACCCTTCAATGAGGACATTCTC | + |
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Preference number: 5 (lower is better) Translates to: LTRSSGGHHFWIHHF*LYPWCSGPFNEDIL Trigger: GAGAATGTCCTCATTGAAGGGTCCTGAGCACCAAGGGTACAGTCAGAAATGATGAATCCAGAAATGATGCCCTCCAGAACTTCTGGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000440786.2 ENST00000655718.1 ENST00000659655.1 ENST00000666737.1 |
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| CDS GCA 90 bp | CTTCTTGTTAGCCATCTATCCCCACTGTGTTATTCATCTTCCGGCTaGTTTGGTGAGTGCCAAAATGCTTCTGGGAGCTTTCTGAGCACT | + |
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Preference number: 5 (lower is better) Translates to: LLVSHLSPLCYSSSG*FGECQNASGSFLST Trigger: AGTGCTCAGAAAGCTCCCAGAAGCATTTTGGCACTCACCAAAGCAGCCGGAAGATGAATAACACAGTGGGGATAGATGGCTAACAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424364.6 |
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| CDS CCA 90 bp | AAGTCAGTCTGTGGTTTGGGCATCTTCAGTCCATCAAGAACTCTGTaGTCATGCCCAAGTCTAGTTTCTGGGCCTGCAAGTCATGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: KSVCGLGIFSPSRTL*SCPSLVSGPASHGN Trigger: ATTTCCATGACTTGCAGGCCCAGAAACTAGACTTGGGCATGACCACAGAGTTCTTGATGGACTGAAGATGCCCAAACCACAGACTGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414054.5 |
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| CDS CCA 90 bp | ACTATTCCACCCCACATGTTCATTTCTAGCCTACAAGTCAGTCTGTaGTTTGGGCATCTTCAGTCCATCAAGAACTCTGTGGTCATGCCC | + |
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Preference number: 5 (lower is better) Translates to: TIPPHMFISSLQVSL*FGHLQSIKNSVVMP Trigger: GGGCATGACCACAGAGTTCTTGATGGACTGAAGATGCCCAAACCACAGACTGACTTGTAGGCTAGAAATGAACATGTGGGGTGGAATAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414054.5 |
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| CDS CCA 90 bp | CATAGGGTGCTGCATTTTCCTGAGTGCCTTCCTCACCAGAAGTTCTaGAGGGCATCATTTCTGGATTCATCATTTCTGACTGTACCCTTG | + |
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Preference number: 5 (lower is better) Translates to: HRVLHFPECLPHQKF*RASFLDSSFLTVPL Trigger: CAAGGGTACAGTCAGAAATGATGAATCCAGAAATGATGCCCTCCAGAACTTCTGGTGAGGAAGGCACTCAGGAAAATGCAGCACCCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000440786.2 ENST00000654895.1 ENST00000655718.1 ENST00000659406.1 ENST00000659655.1 ENST00000660594.1 ENST00000663506.1 ENST00000666151.1 ENST00000666737.1 ENST00000671158.1 |
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| CDS CCA 90 bp | GACCAAGTGTGTCTTTTCTATACTTGGAATTCACCCCGTTGCCTCTaGATTCTGTCTCTGTTAATCCGTTCCGATGAGTCTTGCCCGACT | + |
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Preference number: 5 (lower is better) Translates to: DQVCLFYTWNSPRCL*ILSLLIRSDESCPT Trigger: AGTCGGGCAAGACTCATCGGAACGGATTAACAGAGACAGAATCCAGAGGCAACGGGGTGAATTCCAAGTATAGAAAAGACACACTTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
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| CDS TCA 90 bp | CAAGCTCATCACAGACACACGAGACACCATCCAAGTGACTTTCAGTaGTCCTTTTCCAGCCTGAGCTTAAACATACACCGTTCAGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: QAHHRHTRHHPSDFQ*SFSSLSLNIHRSED Trigger: GTCTTCTGAACGGTGTATGTTTAAGCTCAGGCTGGAAAAGGATCACTGAAAGTCACTTGGATGGTGTCTCGTGTGTCTGTGATGAGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654101.1 |
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| CDS TCA 90 bp | AAAGCAACAGCAAGCTCATCACAGACACACGAGACACCATCCAAGTaGCTTTCAGTGATCCTTTTCCAGCCTGAGCTTAAACATACACCG | + |
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Preference number: 5 (lower is better) Translates to: KATASSSQTHETPSK*LSVILFQPELKHTP Trigger: CGGTGTATGTTTAAGCTCAGGCTGGAAAAGGATCACTGAAAGTCACTTGGATGGTGTCTCGTGTGTCTGTGATGAGCTTGCTGTTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654101.1 |
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| CDS TCA 90 bp | TCCCAGAGAAATTTTTCCTCAGGAGTTTGCCTTTCTCTATCCCGTTaGAAATCACACTCCTGGAGAGAAGATCAGAGGAGCATGACCCTG | + |
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Preference number: 5 (lower is better) Translates to: SQRNFSSGVCLSLSR*KSHSWREDQRSMTL Trigger: CAGGGTCATGCTCCTCTGATCTTCTCTCCAGGAGTGTGATTTTCAACGGGATAGAGAAAGGCAAACTCCTGAGGAAAAATTTCTCTGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654101.1 |
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| CDS GCA 90 bp | TGGAATTGGACTGAATGCTTTTCTCCTAAATGGCCCACAGGCCTTTaGATAGTAGTGATCACGGTGAACAGAGAACCATCCCATCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: WNWTECFSPKWPTGL*IVVITVNREPSHLK Trigger: CTTCAGATGGGATGGTTCTCTGTTCACCGTGATCACTACTATGCAAAGGCCTGTGGGCCATTTAGGAGAAAAGCATTCAGTCCAATTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS CCA 90 bp | TCCTCACTGTGTCTGTGGAATTGGACTGAATGCTTTTCTCCTAAATaGCCCACAGGCCTTTGCATAGTAGTGATCACGGTGAACAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: SSLCLWNWTECFSPK*PTGLCIVVITVNRE Trigger: TTCTCTGTTCACCGTGATCACTACTATGCAAAGGCCTGTGGGCCATTTAGGAGAAAAGCATTCAGTCCAATTCCACAGACACAGTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS TCA 90 bp | AAAGCAACAGCAAGCTCATCACAGACACACGAGACACCATCCAAGTaGCTTTCAGTGATCCTTTTCCAGCCTGAGCTTAAACATACACTG | + |
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Preference number: 5 (lower is better) Translates to: KATASSSQTHETPSK*LSVILFQPELKHTL Trigger: CAGTGTATGTTTAAGCTCAGGCTGGAAAAGGATCACTGAAAGTCACTTGGATGGTGTCTCGTGTGTCTGTGATGAGCTTGCTGTTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414054.5 |
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| CDS TCA 90 bp | CAAGCTCATCACAGACACACGAGACACCATCCAAGTGACTTTCAGTaGTCCTTTTCCAGCCTGAGCTTAAACATACACAATTCTGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: QAHHRHTRHHPSDFQ*SFSSLSLNIHNSGS Trigger: GCTTCCAGAATTGTGTATGTTTAAGCTCAGGCTGGAAAAGGATCACTGAAAGTCACTTGGATGGTGTCTCGTGTGTCTGTGATGAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424364.6 |
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| CDS TCA 90 bp | AAAGCAACAGCAAGCTCATCACAGACACACGAGACACCATCCAAGTaGCTTTCAGTGATCCTTTTCCAGCCTGAGCTTAAACATACACCA | + |
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Preference number: 5 (lower is better) Translates to: KATASSSQTHETPSK*LSVILFQPELKHTP Trigger: TGGTGTATGTTTAAGCTCAGGCTGGAAAAGGATCACTGAAAGTCACTTGGATGGTGTCTCGTGTGTCTGTGATGAGCTTGCTGTTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000435075.1 ENST00000663645.1 |
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| CDS TCA 90 bp | AAAATGTGCTTTCACTGTAAGCTTCAGTGCCCTGGAGCAGTGCTGTaGGATCCTTCTATGAGCTCTAGGCAGCAATTAAGTCGTTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: KMCFHCKLQCPGAVL*DPSMSSRQQLSRSE Trigger: TTCTGAACGACTTAATTGCTGCCTAGAGCTCATAGAAGGATCTCACAGCACTGCTCCAGGGCACTGAAGCTTACAGTGAAAGCACATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663645.1 |
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| CDS CCA 90 bp | TCAGAAGACCACTTTAATAATATCAGTTTTCTGCCTCGTAGCCCTTaGCAGGACTCTCTTTTCACAGAACACAATGTTGGCACAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SEDHFNNISFLPRSP*QDSLFTEHNVGTGP Trigger: TGGCCCTGTGCCAACATTGTGTTCTGTGAAAAGAGAGTCCTGCCAAGGGCTACGAGGCAGAAAACTGATATTATTAAAGTGGTCTTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648808.2 |
||
| CDS TCA 90 bp | AAAGCAACAGCAAGCTCATCACAGACACACGAGACACCATCCAAGTaGCTTTCAGTGATCCTTTTCCAGCCTGAGCTTAAACATACACAA | + |
|
Preference number: 5 (lower is better) Translates to: KATASSSQTHETPSK*LSVILFQPELKHTQ Trigger: TTGTGTATGTTTAAGCTCAGGCTGGAAAAGGATCACTGAAAGTCACTTGGATGGTGTCTCGTGTGTCTGTGATGAGCTTGCTGTTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424364.6 |
||
| CDS TCA 90 bp | CAAGCTCATCACAGACACACGAGACACCATCCAAGTGACTTTCAGTaGTCCTTTTCCAGCCTGAGCTTAAACATACACCACAGTTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QAHHRHTRHHPSDFQ*SFSSLSLNIHHSFK Trigger: TTTGAAACTGTGGTGTATGTTTAAGCTCAGGCTGGAAAAGGATCACTGAAAGTCACTTGGATGGTGTCTCGTGTGTCTGTGATGAGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000435075.1 ENST00000663645.1 |
||
| CDS TCA 90 bp | AGAAAAATCCAGCTTTACGTGGTCCTGATGGCAGCATGCCTGAGCTaGAACATACCCTCAGACCAAGTGTGTCTTTTCTATACTTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RKIQLYVVLMAACLS*NIPSDQVCLFYTWN Trigger: ATTCCAAGTATAGAAAAGACACACTTGGTCTGAGGGTATGTTTCAGCTCAGGCATGCTGCCATCAGGACCACGTAAAGCTGGATTTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
||
| CDS GCA 90 bp | GCAGAGAGTTGCGTTCAGAAGACCACTTTAATAATATCAGTTTTCTaGCTCGTAGCCCTTGGCAGGACTCTCTTTTCACAGAACACAATG | + |
|
Preference number: 5 (lower is better) Translates to: AESCVQKTTLIISVF*LVALGRTLFSQNTM Trigger: CATTGTGTTCTGTGAAAAGAGAGTCCTGCCAAGGGCTACGAGGCAGAAAACTGATATTATTAAAGTGGTCTTCTGAACGCAACTCTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000648808.2 ENST00000663772.1 |
||
| CDS TCA 90 bp | AACCCACGTGTGATGAACTGGAAGAATGATCCATCCCTCTTGTGTTaGCTGCCTTCCAAGAGCTACTCAGTAAATACTTGCTATACAACT | + |
|
Preference number: 5 (lower is better) Translates to: NPRVMNWKNDPSLLC*LPSKSYSVNTCYTT Trigger: AGTTGTATAGCAAGTATTTACTGAGTAGCTCTTGGAAGGCAGTCAACACAAGAGGGATGGATCATTCTTCCAGTTCATCACACGTGGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS GCA 90 bp | TTGACAGTAGTGACTGAGTATTTCCTCCTTGGATCCACTCATATATaGCTAGGGCATATTACATCCTCACTGTGTCTGTGGAATTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LTVVTEYFLLGSTHI*LGHITSSLCLWNWT Trigger: AGTCCAATTCCACAGACACAGTGAGGATGTAATATGCCCTAGGCATATATGAGTGGATCCAAGGAGGAAATACTCAGTCACTACTGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
||
| CDS GCA 90 bp | GAAGGGAGGGAGTGGGCCTTATTCAACTTAGAACCCTTAGGACCTTaGAGAGAGTTGCGTTCAGAAGACCACTTTAATAATATCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: EGREWALFNLEPLGP*RELRSEDHFNNISF Trigger: AAAACTGATATTATTAAAGTGGTCTTCTGAACGCAACTCTCTGCAAGGTCCTAAGGGTTCTAAGTTGAATAAGGCCCACTCCCTCCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
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| CDS TCA 90 bp | GTACTGTCCTCACAGAGACATTGGGAGGATAATAAGAGAAAGCTGTaGAAAGGTGATCAATATATTTCAGCTAATAAGCTCCCAAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLSSQRHWEDNKRKL*KGDQYISANKLPSL Trigger: GAGGCTTGGGAGCTTATTAGCTGAAATATATTGATCACCTTTTCACAGCTTTCTCTTATTATCCTCCCAATGTCTCTGTGAGGACAGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654101.1 ENST00000663645.1 |
||
| CDS CCA 90 bp | ATTCTCTCCGAAAATCTTCTCTTCAGAAGGCATGGTGTAAAGAGATaGATAGGTAGAATCTCTTCCTACAATCCTCTTGCAGCTAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: ILSENLLFRRHGVKR*IGRISSYNPLAANC Trigger: GCAATTAGCTGCAAGAGGATTGTAGGAAGAGATTCTACCTATCCATCTCTTTACACCATGCCTTCTGAAGAGAAGATTTTCGGAGAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655718.1 ENST00000660594.1 ENST00000663506.1 |
||
| CDS TCA 90 bp | TTACCTCTTGTTAGCTGTGCAATCGAAGACAAGTTGTTTAACCTTTaGAGCCACTGTTTTCTCATCTGTCAAGGAGAAAGAAAGCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: LPLVSCAIEDKLFNL*SHCFLICQGERKQQ Trigger: CTGTTGCTTTCTTTCTCCTTGACAGATGAGAAAACAGTGGCTTCAAAGGTTAAACAACTTGTCTTCGATTGCACAGCTAACAAGAGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654101.1 ENST00000663645.1 |
||
| CDS TCA 90 bp | GGTAATAACAACACAGGTGTCACACGGATTTTCAGGAGGATTAAATaGGTAAATAGGTGTAAAACACTTACTGCTTGGTACTCGCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GNNNTGVTRIFRRIK*VNRCKTLTAWYSQV Trigger: CACTTGCGAGTACCAAGCAGTAAGTGTTTTACACCTATTTACTCATTTAATCCTCCTGAAAATCCGTGTGACACCTGTGTTGTTATTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663772.1 |
||
| CDS CCA 90 bp | TCTCCTGCCTTAGCCTCCCTAGTAGCTGAGACTATAGGTAAACTTTaGAATATGACAAATCTAAATTCAAATCCTGATCCCAAGCATTAC | + |
|
Preference number: 5 (lower is better) Translates to: SPALASLVAETIGKL*NMTNLNSNPDPKHY Trigger: GTAATGCTTGGGATCAGGATTTGAATTTAGATTTGTCATATTCCAAAGTTTACCTATAGTCTCAGCTACTAGGGAGGCTAAGGCAGGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654101.1 ENST00000663645.1 |
||
| CDS GCA 90 bp | GTTGTTCTTGTTCTTATTTACTTGTGGCTTATCCTTTTGTTTTGTTaGCTGCATGCATTGGCTAGTAGACAATTGGTAGCAGGTGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: VVLVLIYLWLILLFC*LHALASRQLVAGDN Trigger: ATTGTCACCTGCTACCAATTGTCTACTAGCCAATGCATGCAGGCAACAAAACAAAAGGATAAGCCACAAGTAAATAAGAACAAGAACAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000654895.1 ENST00000659406.1 ENST00000659655.1 ENST00000666151.1 |
||
| CDS CAA 72 bp | ACCTGCCTTCTGCCGGCTGGGATGCAGGCTGCAGCGTaGCCCAAGAGTCAGTGGGCAAATGGTGCTCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TCLLPAGMQAAA*PKSQWANGAPP Trigger: GGGAGGAGCACCATTTGCCCACTGACTCTTGGGCAACGCTGCAGCCTGCATCCCAGCCGGCAGAAGGCAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS GCA 72 bp | GGCTGCAGCGTTGCCCAAGAGTCAGTGGGCAAATGGTaGTCCTCCCAGCTTGGCTACTCGGACCCAGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: GCSVAQESVGKW*SSQLGYSDPGI Trigger: GATCCCTGGGTCCGAGTAGCCAAGCTGGGAGGAGCACCATTTGCCCACTGACTCTTGGGCAACGCTGCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
||
| CDS CCA 72 bp | GCTGGGATGCAGGCTGCAGCGTTGCCCAAGAGTCAGTaGGCAAATGGTGCTCCTCCCAGCTTGGCTACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: AGMQAAALPKSQ*ANGAPPSLATR Trigger: CCGAGTAGCCAAGCTGGGAGGAGCACCATTTGCCCACTGACTCTTGGGCAACGCTGCAGCCTGCATCCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS CCA 72 bp | TCTAGTTTCTGGGCCTGCAAGTCATGGAAATGCCCCTaGGAGGCAGCCGTCCAGCTGTCCCCCTCAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSFWACKSWKCP*EAAVQLSPSAA Trigger: GGCTGCTGAGGGGGACAGCTGGACGGCTGCCTCCCAGGGGCATTTCCATGACTTGCAGGCCCAGAAACTAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000414054.5 |
||
| CDS CAA 90 bp | TGTGATACCACCTGCCTTCTGCCGGCTGGGATGCAGGCTGCAGCGTaGCCCAAGAGTCAGTGGGCAAATGGTGCTCCTCCCAGCTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CDTTCLLPAGMQAAA*PKSQWANGAPPSLA Trigger: AGCCAAGCTGGGAGGAGCACCATTTGCCCACTGACTCTTGGGCAACGCTGCAGCCTGCATCCCAGCCGGCAGAAGGCAGGTGGTATCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
||
| CDS GCA 72 bp | CCCAAGTCTAGTTTCTGGGCCTGCAAGTCATGGAAATaGCCCTGGGAGGCAGCCGTCCAGCTGTCCCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PKSSFWACKSWK*PWEAAVQLSPS Trigger: TGAGGGGGACAGCTGGACGGCTGCCTCCCAGGGGCATTTCCATGACTTGCAGGCCCAGAAACTAGACTTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000414054.5 |
||
| CDS GCA 72 bp | GTGGCTGTAAACTCAGCTGTGATACCACCTGCCTTCTaGCGGCTGGGATGCAGGCTGCAGCGTTGCCCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: VAVNSAVIPPAF*RLGCRLQRCPR Trigger: TCTTGGGCAACGCTGCAGCCTGCATCCCAGCCGGCAGAAGGCAGGTGGTATCACAGCTGAGTTTACAGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
||
| CDS GCA 72 bp | TCCTTCCGTGGCTGTAAACTCAGCTGTGATACCACCTaGCTTCTGCCGGCTGGGATGCAGGCTGCAGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SFRGCKLSCDTT*LLPAGMQAAAL Trigger: CAACGCTGCAGCCTGCATCCCAGCCGGCAGAAGGCAGGTGGTATCACAGCTGAGTTTACAGCCACGGAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
||
| CDS GCA 72 bp | CCCCAGAGGTTCTGGTCCGTAGCAAGTGGCACACTCTaGCCCTCCTACGGGTCATTCGTGGTGGCTTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PQRFWSVASGTL*PSYGSFVVAFG Trigger: TCCAAAAGCCACCACGAATGACCCGTAGGAGGGGCAGAGTGTGCCACTTGCTACGGACCAGAACCTCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
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| CDS CCA 72 bp | GTCATGCCCAAGTCTAGTTTCTGGGCCTGCAAGTCATaGAAATGCCCCTGGGAGGCAGCCGTCCAGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VMPKSSFWACKS*KCPWEAAVQLS Trigger: GGACAGCTGGACGGCTGCCTCCCAGGGGCATTTCCATGACTTGCAGGCCCAGAAACTAGACTTGGGCATGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414054.5 |
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| CDS TCA 72 bp | CCGGTTCCAAGCCCCACTCTGCCACTCATGAGTGTGTaGTCTCCAGCAAGCTGGTTAGCATCTGTGCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PVPSPTLPLMSV*SPASWLASVPQ Trigger: CTGAGGCACAGATGCTAACCAGCTTGCTGGAGATCACACACTCATGAGTGGCAGAGTGGGGCTTGGAACCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000414054.5 ENST00000424364.6 ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
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| CDS TCA 72 bp | CAGCCAACAGTCCCTTCATGCTGCCTCCATGACCACTaGCATTTCTCGCCTGCCCGGATGCCATCTCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: QPTVPSCCLHDH*HFSPARMPSLT Trigger: AGTGAGAGATGGCATCCGGGCAGGCGAGAAATGTCAGTGGTCATGGAGGCAGCATGAAGGGACTGTTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666151.1 |
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| CDS TCA 72 bp | GTTTCTGCAGCCAACAGTCCCTTCATGCTGCCTCCATaGCCACTGACATTTCTCGCCTGCCCGGATGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: VSAANSPFMLPP*PLTFLACPDAI Trigger: GATGGCATCCGGGCAGGCGAGAAATGTCAGTGGTCATGGAGGCAGCATGAAGGGACTGTTGGCTGCAGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666151.1 |
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| CDS GCA 72 bp | GACAGCTCTCAGGGGGCCTGTGTGGGTTCTTTCCAGTaGACACATTCACTCTGGAGCAAGCCTCAGCATGTG | + |
|
Preference number: 6 (lower is better) Translates to: DSSQGACVGSFQ*THSLWSKPQHV Trigger: CACATGCTGAGGCTTGCTCCAGAGTGAATGTGTGCACTGGAAAGAACCCACACAGGCCCCCTGAGAGCTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS CCA 72 bp | GCCTGTGTGGGTTCTTTCCAGTGCACACATTCACTCTaGAGCAAGCCTCAGCATGTGGACCGGGGAGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ACVGSFQCTHSL*SKPQHVDRGER Trigger: TCTCTCTCCCCGGTCCACATGCTGAGGCTTGCTCCAGAGTGAATGTGTGCACTGGAAAGAACCCACACAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS CAA 72 bp | GGAGCCCCTGGGTACGTACAGATACGGAACCATTGGTaGCACAGTAGCCCAGAAGACAGTGTGGGATGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GAPGYVQIRNHW*HSSPEDSVGCE Trigger: CTCGCATCCCACACTGTCTTCTGGGCTACTGTGCAACCAATGGTTCCGTATCTGTACGTACCCAGGGGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000648808.2 ENST00000657199.1 |
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| CDS TCA 72 bp | TCCGCTGCACTTGACACCATCAGACTGTGTTCTTCCTaGATGCCCTCCTTTCTGGGCCTCCATAGGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SAALDTIRLCSS*MPSFLGLHRVL Trigger: CAGCACCCTATGGAGGCCCAGAAAGGAGGGCATTCAGGAAGAACACAGTCTGATGGTGTCAAGTGCAGCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000440786.2 ENST00000654895.1 ENST00000655718.1 ENST00000659406.1 ENST00000659655.1 ENST00000660594.1 ENST00000663506.1 ENST00000666151.1 ENST00000666737.1 ENST00000671158.1 |
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| CDS CAA 90 bp | CCCGCCGCAAGTTTCTTTCGAAGATTCCCTTTCTTCCTCCCCACTTaGACCATCCCACAATGCCTCCTGAGGTGTGTGAGTGGATCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PAASFFRRFPFFLPT*TIPQCLLRCVSGSP Trigger: GGGAGATCCACTCACACACCTCAGGAGGCATTGTGGGATGGTCAAAGTGGGGAGGAAGAAAGGGAATCTTCGAAAGAAACTTGCGGCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654101.1 |
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| CDS TCA 72 bp | CACCTCCACTTCCTCCTCTGTCACAGAGGAATTGGATaGAAAGTCCCTGCCAGCCCTAGCAGTCTGTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: HLHFLLCHRGIG*KVPASPSSLCL Trigger: GAGACACAGACTGCTAGGGCTGGCAGGGACTTTTCATCCAATTCCTCTGTGACAGAGGAGGAAGTGGAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654895.1 ENST00000659406.1 ENST00000659655.1 ENST00000666151.1 ENST00000666737.1 |
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| CDS GCA 72 bp | CCCCTCAGCAGCCAGGGACTGCCACCCTATTCAAGATaGTACAGCCAAGAATTAGAGTTAACTGTGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLSSQGLPPYSR*YSQELELTVPS Trigger: GCTGGGCACAGTTAACTCTAATTCTTGGCTGTAGCATCTTGAATAGGGTGGCAGTCCCTGGCTGCTGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
||
| CDS GCA 72 bp | GCCCGGATGCCATCTCTCACTGCTGTCTTCTCAAACTaGTTCTCCTCCTCCAGGGCCCATATCAAGTATCAC | + |
|
Preference number: 6 (lower is better) Translates to: ARMPSLTAVFSN*FSSSRAHIKYH Trigger: GTGATACTTGATATGGGCCCTGGAGGAGGAGAAGCAGTTTGAGAAGACAGCAGTGAGAGATGGCATCCGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000440786.2 ENST00000654895.1 ENST00000655718.1 ENST00000659406.1 ENST00000659655.1 ENST00000660594.1 ENST00000663506.1 ENST00000666151.1 ENST00000671158.1 |
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| CDS GCA 72 bp | CCTGAATGCCCTCCTTTCTGGGCCTCCATAGGGTGCTaGATTTTCCTGAGTGCCTTCCTCACCAGAAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PECPPFWASIGC*IFLSAFLTRSS Trigger: AGAACTTCTGGTGAGGAAGGCACTCAGGAAAATGCAGCACCCTATGGAGGCCCAGAAAGGAGGGCATTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000440786.2 ENST00000654895.1 ENST00000655718.1 ENST00000659406.1 ENST00000659655.1 ENST00000660594.1 ENST00000663506.1 ENST00000666151.1 ENST00000666737.1 ENST00000671158.1 |
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| CDS GCA 72 bp | TCTTCGTCTCTGTCTCTAAGAGCCTTGCCAGGTTTCTaGAGCCAACAGTCCCTTCATGCTGCCTCCATGACC | + |
|
Preference number: 6 (lower is better) Translates to: SSSLSLRALPGF*SQQSLHAASMT Trigger: GGTCATGGAGGCAGCATGAAGGGACTGTTGGCTGCAGAAACCTGGCAAGGCTCTTAGAGACAGAGACGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666151.1 |
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| CDS CCA 72 bp | CCATCAGACTGTGTTCTTCCTGAATGCCCTCCTTTCTaGGCCTCCATAGGGTGCTGCATTTTCCTGAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PSDCVLPECPPF*ASIGCCIFLSA Trigger: GGCACTCAGGAAAATGCAGCACCCTATGGAGGCCCAGAAAGGAGGGCATTCAGGAAGAACACAGTCTGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000440786.2 ENST00000654895.1 ENST00000655718.1 ENST00000659406.1 ENST00000659655.1 ENST00000660594.1 ENST00000663506.1 ENST00000666151.1 ENST00000666737.1 ENST00000671158.1 |
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| CDS CAA 72 bp | AAGCCTCAGCATGTGGACCGGGGAGAGAGACTCCCTTaGGACAGTGAGCTCTTGTTAGCTGTGCAATCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KPQHVDRGERLP*DSELLLAVQSK Trigger: CTTCGATTGCACAGCTAACAAGAGCTCACTGTCCAAAGGGAGTCTCTCTCCCCGGTCCACATGCTGAGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS CAA 90 bp | CTCTGGAGCAAGCCTCAGCATGTGGACCGGGGAGAGAGACTCCCTTaGGACAGTGAGCTCTTGTTAGCTGTGCAATCGAAGACAAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LWSKPQHVDRGERLP*DSELLLAVQSKTSC Trigger: ACAACTTGTCTTCGATTGCACAGCTAACAAGAGCTCACTGTCCAAAGGGAGTCTCTCTCCCCGGTCCACATGCTGAGGCTTGCTCCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS CAA 90 bp | TGCCTCGTAGCCCTTGGCAGGACTCTCTTTTCACAGAACACAATGTaGGCACAGGGCCAAGAGATGGCGAAGTTGACTCAGAGGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: CLVALGRTLFSQNTM*AQGQEMAKLTQRSL Trigger: CAGTGACCTCTGAGTCAACTTCGCCATCTCTTGGCCCTGTGCCAACATTGTGTTCTGTGAAAAGAGAGTCCTGCCAAGGGCTACGAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648808.2 |
||
| CDS CAA 90 bp | CACCTCTCCTTCTGCACCTCCACTTCCTCCTCTGTCACAGAGGAATaGGATGAAAAGTCCCTGCCAGCCCTAGCAGTCTGTGTCTCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: HLSFCTSTSSSVTEE*DEKSLPALAVCVSK Trigger: CTTAGAGACACAGACTGCTAGGGCTGGCAGGGACTTTTCATCCAATTCCTCTGTGACAGAGGAGGAAGTGGAGGTGCAGAAGGAGAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000654895.1 ENST00000659406.1 ENST00000659655.1 ENST00000666151.1 ENST00000666737.1 |
||
| CDS TCA 72 bp | GCATGTGGACCGGGGAGAGAGACTCCCTTTGGACAGTaGGCTCTTGTTAGCTGTGCAATCGAAGACAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ACGPGRETPFGQ*ALVSCAIEDKL Trigger: CAACTTGTCTTCGATTGCACAGCTAACAAGAGCTCACTGTCCAAAGGGAGTCTCTCTCCCCGGTCCACATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
||
| CDS TCA 72 bp | TTGCCTCTGGATTCTGTCTCTGTTAATCCGTTCCGATaGGTCTTGCCCGACTTCTGCCCCAACCAACCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LPLDSVSVNPFR*VLPDFCPNQPQ Trigger: CTGAGGTTGGTTGGGGCAGAAGTCGGGCAAGACTCATCGGAACGGATTAACAGAGACAGAATCCAGAGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
||
| CDS GCA 72 bp | GACCTCTCTTCCCTTTGCATTTCTCGCCTGCCCGGATaGCATCTCTCACTGCTGTCTTCTCAAACTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: DLSSLCISRLPG*HLSLLSSQTAS Trigger: AGAAGCAGTTTGAGAAGACAGCAGTGAGAGATGGCATCCGGGCAGGCGAGAAATGCAAAGGGAAGAGAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000440786.2 ENST00000655718.1 ENST00000659406.1 ENST00000659655.1 ENST00000663506.1 |
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| CDS GCA 72 bp | CTGCACTTGACACCATCAGACTGTGTTCTTCCTGAATaGCCTCCTTTCTGGGCCTCCATAGGGTGCTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: LHLTPSDCVLPE*PPFWASIGCCI Trigger: AATGCAGCACCCTATGGAGGCCCAGAAAGGAGGGCATTCAGGAAGAACACAGTCTGATGGTGTCAAGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000440786.2 ENST00000654895.1 ENST00000655718.1 ENST00000659406.1 ENST00000659655.1 ENST00000660594.1 ENST00000663506.1 ENST00000666151.1 ENST00000666737.1 ENST00000671158.1 |
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| CDS CAA 72 bp | GCCCTTGGCAGGACTCTCTTTTCACAGAACACAATGTaGGCACAGGGCCAAGAGATGGCGAAGTTGACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ALGRTLFSQNTM*AQGQEMAKLTQ Trigger: CTGAGTCAACTTCGCCATCTCTTGGCCCTGTGCCAACATTGTGTTCTGTGAAAAGAGAGTCCTGCCAAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648808.2 |
||
| CDS CAA 72 bp | TTCTGCACCTCCACTTCCTCCTCTGTCACAGAGGAATaGGATGAAAAGTCCCTGCCAGCCCTAGCAGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FCTSTSSSVTEE*DEKSLPALAVC Trigger: ACAGACTGCTAGGGCTGGCAGGGACTTTTCATCCAATTCCTCTGTGACAGAGGAGGAAGTGGAGGTGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000654895.1 ENST00000659406.1 ENST00000659655.1 ENST00000666151.1 ENST00000666737.1 |
||
| CDS CAA 90 bp | TTCTGGAGGGCATCATTTCTGGATTCATCATTTCTGACTGTACCCTaGGTGCTCAGGACATTTCTCGCCTGCCCGGATGCCATCTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: FWRASFLDSSFLTVP*VLRTFLACPDAISH Trigger: GTGAGAGATGGCATCCGGGCAGGCGAGAAATGTCCTGAGCACCAAGGGTACAGTCAGAAATGATGAATCCAGAAATGATGCCCTCCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654895.1 ENST00000660594.1 ENST00000671158.1 |
||
| CDS TCA 72 bp | CCCTTGGTGCTCAGGACTTTGAATCTGCACTTCCCGTaGCTGCTGGGTTTCCTAAACCACAGAACTCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PLVLRTLNLHFP*LLGFLNHRTPH Trigger: ATGAGGAGTTCTGTGGTTTAGGAAACCCAGCAGTCACGGGAAGTGCAGATTCAAAGTCCTGAGCACCAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666151.1 |
||
| CDS GCA 72 bp | TTCTGTACTTTTGTCCTGGATGACCTCTCTTCCCTTTaGATTTCTCGCCTGCCCGGATGCCATCTCTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: FCTFVLDDLSSL*ISRLPGCHLSL Trigger: CAGTGAGAGATGGCATCCGGGCAGGCGAGAAATGCAAAGGGAAGAGAGGTCATCCAGGACAAAAGTACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000440786.2 ENST00000655718.1 ENST00000659406.1 ENST00000659655.1 ENST00000663506.1 |
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| CDS GCA 72 bp | CTGTGCCTCAGGTCCTCACTGCTTGGTACTCGCAAGTaGTCAACTCAGCAGAGTCACCTATTGTTTCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LCLRSSLLGTRK*STQQSHLLFPL Trigger: CAAAGGAAACAATAGGTGACTCTGCTGAGTTGAGCACTTGCGAGTACCAAGCAGTGAGGACCTGAGGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000648808.2 ENST00000657199.1 |
||
| CDS GCA 72 bp | GGGCAGCTTTTTCAGAGATGGAGTAAGTGTCCTCTGTaGTTCTGTGAGGAGGAACTTGGCTCAGGCTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: GQLFQRWSKCPL*FCEEELGSGSE Trigger: TTCAGAGCCTGAGCCAAGTTCCTCCTCACAGAAGCACAGAGGACACTTACTCCATCTCTGAAAAAGCTGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
||
| CDS CCA 72 bp | CAACCAACCTCAGCTAAAGTCCTGGAAGGGAGGGAGTaGGCCTTATTCAACTTAGAACCCTTAGGACCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QPTSAKVLEGRE*ALFNLEPLGPC Trigger: GCAAGGTCCTAAGGGTTCTAAGTTGAATAAGGCCCACTCCCTCCCTTCCAGGACTTTAGCTGAGGTTGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
||
| CDS CCA 72 bp | TTCTGCACATTGGAGAAAGACCTCCAATATTTGATTTaGCAGGCAGGGCCTCAGTCCAGCTGCCTGAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: FCTLEKDLQYLI*QAGPQSSCLST Trigger: AGTGCTCAGGCAGCTGGACTGAGGCCCTGCCTGCCAAATCAAATATTGGAGGTCTTTCTCCAATGTGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654895.1 ENST00000659406.1 ENST00000659655.1 ENST00000666151.1 ENST00000666737.1 |
||
| CDS CAA 72 bp | ATAGGTGGTGAGCCAGATTGGCCCACAAGCCATAGTTaGGCAAACCCTGCAGCAGGTCATGAGTTCTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: IGGEPDWPTSHS*ANPAAGHEFLT Trigger: TGTCAAGAACTCATGACCTGCTGCAGGGTTTGCCAAACTATGGCTTGTGGGCCAATCTGGCTCACCACCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
||
| CDS CAA 72 bp | GGAGTAAGTGTCCTCTGTGCTTCTGTGAGGAGGAACTaGGCTCAGGCTCTGAAAGGCTTCTATCCTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GVSVLCASVRRN*AQALKGFYPFL Trigger: CAGGAAAGGATAGAAGCCTTTCAGAGCCTGAGCCAAGTTCCTCCTCACAGAAGCACAGAGGACACTTACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
||
| CDS CAA 72 bp | GCATCATTTCTGGATTCATCATTTCTGACTGTACCCTaGGTGCTCAGGACATTTCTCGCCTGCCCGGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASFLDSSFLTVP*VLRTFLACPDA Trigger: GGCATCCGGGCAGGCGAGAAATGTCCTGAGCACCAAGGGTACAGTCAGAAATGATGAATCCAGAAATGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654895.1 ENST00000660594.1 ENST00000671158.1 |
||
| CDS CAA 72 bp | TTTCTGCACATTGGAGAAAGACCTCCAATATTTGATTaGGCAGGCAGGGCCTCAGTCCAGCTGCCTGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: FLHIGERPPIFD*AGRASVQLPEH Trigger: GTGCTCAGGCAGCTGGACTGAGGCCCTGCCTGCCAAATCAAATATTGGAGGTCTTTCTCCAATGTGCAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654895.1 ENST00000659406.1 ENST00000659655.1 ENST00000666151.1 ENST00000666737.1 |
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| CDS CAA 90 bp | CAGCATGTGGACCGGGGAGAGAGACTCCCTTTGGACAGTGAGCTCTaGTTAGCTGTGCAATCGAAGACAAGTTGTTTAACCTTTGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: QHVDRGERLPLDSEL*LAVQSKTSCLTFEA Trigger: GGCTTCAAAGGTTAAACAACTTGTCTTCGATTGCACAGCTAACAAGAGCTCACTGTCCAAAGGGAGTCTCTCTCCCCGGTCCACATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
||
| CDS CAA 90 bp | TTCAGAGATGGAGTAAGTGTCCTCTGTGCTTCTGTGAGGAGGAACTaGGCTCAGGCTCTGAAAGGCTTCTATCCTTTCCTGCCTCATGAG | + |
|
Preference number: 6 (lower is better) Translates to: FRDGVSVLCASVRRN*AQALKGFYPFLPHE Trigger: CTCATGAGGCAGGAAAGGATAGAAGCCTTTCAGAGCCTGAGCCAAGTTCCTCCTCACAGAAGCACAGAGGACACTTACTCCATCTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648808.2 |
||
| CDS CAA 90 bp | TTCAGAGATGGAGTAAGTGTCCTCTGTGCTTCTGTGAGGAGGAACTaGGCTCAGGCTCTGAAAGGCTTCTATCCTTTCCTGCCTCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: FRDGVSVLCASVRRN*AQALKGFYPFLPHA Trigger: AGCATGAGGCAGGAAAGGATAGAAGCCTTTCAGAGCCTGAGCCAAGTTCCTCCTCACAGAAGCACAGAGGACACTTACTCCATCTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657199.1 ENST00000663772.1 |
||
| CDS TCA 72 bp | ATCCCCACTGTGTTATTCATCTTCCGGCTGCTTTGGTaGGTGCCAAAATGCTTCTGGGAGCTTTCTGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: IPTVLFIFRLLW*VPKCFWELSEH Trigger: GTGCTCAGAAAGCTCCCAGAAGCATTTTGGCACTCACCAAAGCAGCCGGAAGATGAATAACACAGTGGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424364.6 |
||
| CDS TCA 72 bp | AGTTCTGGAGGGCATCATTTCTGGATTCATCATTTCTaGCTGTACCCTTGGTGCTCAGGACCTGTCCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSGGHHFWIHHF*LYPWCSGPVHG Trigger: CCCATGGACAGGTCCTGAGCACCAAGGGTACAGTCAGAAATGATGAATCCAGAAATGATGCCCTCCAGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659406.1 ENST00000663506.1 |
||
| CDS GCA 72 bp | TTGGGCATCTTCAGTCCATCAAGAACTCTGTGGTCATaGCCAAGTCTAGTTTCTGGGCCTGCAAGTCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: LGIFSPSRTLWS*PSLVSGPASHG Trigger: TCCATGACTTGCAGGCCCAGAAACTAGACTTGGGCATGACCACAGAGTTCTTGATGGACTGAAGATGCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414054.5 |
||
| CDS CAA 72 bp | GACCGGGGAGAGAGACTCCCTTTGGACAGTGAGCTCTaGTTAGCTGTGCAATCGAAGACAAGTTGTTTAACC | + |
|
Preference number: 6 (lower is better) Translates to: DRGERLPLDSEL*LAVQSKTSCLT Trigger: GGTTAAACAACTTGTCTTCGATTGCACAGCTAACAAGAGCTCACTGTCCAAAGGGAGTCTCTCTCCCCGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
||
| CDS TCA 72 bp | GCACATATAACAGTATCTCTTAGCCTCCGCTGCACTTaGCACCATCAGACTGTGTTCTTCCTGAATGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AHITVSLSLRCT*HHQTVFFLNAL Trigger: GAGGGCATTCAGGAAGAACACAGTCTGATGGTGTCAAGTGCAGCGGAGGCTAAGAGATACTGTTATATGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655718.1 ENST00000660594.1 ENST00000663506.1 |
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| CDS GCA 72 bp | TTCTGTACTTTTGTCCTGGATGACCTCTCTTCCCTTTaGCTTCAGTCAGGATTGAGGGTGCTCTCCTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: FCTFVLDDLSSL*LQSGLRVLSSV Trigger: TACAGAGGAGAGCACCCTCAATCCTGACTGAAGGCAAAGGGAAGAGAGGTCATCCAGGACAAAAGTACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666737.1 |
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| CDS CCA 72 bp | TCTTCTGGTCTCTGTGTTAGTGTAGCGCTACGAACCTaGCCTCTGAAGTCACAGTACCACGATTCAAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSGLCVSVALRT*PLKSQYHDSNS Trigger: GGAATTTGAATCGTGGTACTGTGACTTCAGAGGCCAGGTTCGTAGCGCTACACTAACACAGAGACCAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654101.1 ENST00000663645.1 |
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| CDS CAA 72 bp | GCATCATTTCTGGATTCATCATTTCTGACTGTACCCTaGGTGCTCAGGACCTGTCCATGGGAGGTGCCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: ASFLDSSFLTVP*VLRTCPWEVPK Trigger: TTTTGGCACCTCCCATGGACAGGTCCTGAGCACCAAGGGTACAGTCAGAAATGATGAATCCAGAAATGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659406.1 ENST00000663506.1 |
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| CDS CAA 90 bp | GCACTTCCCGTGACTGCTGGGTTTCCTAAACCACAGAACTCCTCATaGTCCCATCATGCTCAAAAACACTTTCTGTTTCTCATTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALPVTAGFPKPQNSS*SHHAQKHFLFLIAS Trigger: GGAGGCAATGAGAAACAGAAAGTGTTTTTGAGCATGATGGGACAATGAGGAGTTCTGTGGTTTAGGAAACCCAGCAGTCACGGGAAGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666151.1 |
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| CDS CAA 90 bp | TTTACTAAAATAGGTGGTGAGCCAGATTGGCCCACAAGCCATAGTTaGGCAAACCCTGCAGCAGGTCATGAGTTCTTGACAGTAGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: FTKIGGEPDWPTSHS*ANPAAGHEFLTVVT Trigger: AGTCACTACTGTCAAGAACTCATGACCTGCTGCAGGGTTTGCCAAACTATGGCTTGTGGGCCAATCTGGCTCACCACCTATTTTAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS CAA 90 bp | TCGACTTCAGCCTGGGCTTTCCCAGAGAAATTTTTCCTCAGGAGTTaGCCTTTCTCTATCCCGTTGAAAATCACACTCCTGGAGAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: STSAWAFPEKFFLRS*PFSIPLKITLLERR Trigger: TCTTCTCTCCAGGAGTGTGATTTTCAACGGGATAGAGAAAGGCAAACTCCTGAGGAAAAATTTCTCTGGGAAAGCCCAGGCTGAAGTCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654101.1 |
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| CDS CAA 90 bp | ACACCACAGTTTCAAACCAGCCAACGTGGAGACAATCTTCAGTACTaGCTGAAAATGTGCTTTCACTGTAAGCTTCAGTGCCCTGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TPQFQTSQRGDNLQY*LKMCFHCKLQCPGA Trigger: TGCTCCAGGGCACTGAAGCTTACAGTGAAAGCACATTTTCAGCAAGTACTGAAGATTGTCTCCACGTTGGCTGGTTTGAAACTGTGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663645.1 |
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| CDS TCA 72 bp | TCAGCAAAGAGATCCTTCTGTAGTATCCTTGACGCATaGCATCTAGTTAGCATCCTTCTGCGATGCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SAKRSFCSILDA*HLVSILLRCLC Trigger: GCAGAGGCATCGCAGAAGGATGCTAACTAGATGTCATGCGTCAAGGATACTACAGAAGGATCTCTTTGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS TCA 72 bp | TTTCACTGTAAGCTTCAGTGCCCTGGAGCAGTGCTGTaGGATCCTTCTATGAGCTCTAGGCAGCAATTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: FHCKLQCPGAVL*DPSMSSRQQLS Trigger: ACTTAATTGCTGCCTAGAGCTCATAGAAGGATCTCACAGCACTGCTCCAGGGCACTGAAGCTTACAGTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424364.6 ENST00000663645.1 |
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| CDS TCA 72 bp | AGTTCTGGAGGGCATCATTTCTGGATTCATCATTTCTaGCTGTACCCTTGGTGCTCAGGACCCTTCAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSGGHHFWIHHF*LYPWCSGPFNE Trigger: CTCATTGAAGGGTCCTGAGCACCAAGGGTACAGTCAGAAATGATGAATCCAGAAATGATGCCCTCCAGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000440786.2 ENST00000655718.1 ENST00000659655.1 ENST00000666737.1 |
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| CDS TCA 72 bp | AGTTCTGGAGGGCATCATTTCTGGATTCATCATTTCTaGCTGTACCCTTGGTGCTCAGGACATTTCTCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSGGHHFWIHHF*LYPWCSGHFSP Trigger: AGGCGAGAAATGTCCTGAGCACCAAGGGTACAGTCAGAAATGATGAATCCAGAAATGATGCCCTCCAGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654895.1 ENST00000660594.1 ENST00000671158.1 |
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| CDS GCA 72 bp | CAACGTGGAGACAATCTTCAGTACTTGCTGAAAATGTaGTTTCACTGTAAGCTTCAGTGCCCTGGAGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: QRGDNLQYLLKM*FHCKLQCPGAV Trigger: CACTGCTCCAGGGCACTGAAGCTTACAGTGAAAGCACATTTTCAGCAAGTACTGAAGATTGTCTCCACGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424364.6 ENST00000663645.1 |
||
| CDS CCA 72 bp | TGTCTGTGGAATTGGACTGAATGCTTTTCTCCTAAATaGCCCACAGGCCTTTGCATAGTAGTGATCACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CLWNWTECFSPK*PTGLCIVVITV Trigger: CACCGTGATCACTACTATGCAAAGGCCTGTGGGCCATTTAGGAGAAAAGCATTCAGTCCAATTCCACAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS CAA 72 bp | ACCATCCCATCTGAAGGAACCTTAGAGGTACCCTCCTaGTCAGCAAAGAGATCCTTCTGTAGTATCCTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: TIPSEGTLEVPS*SAKRSFCSILD Trigger: GTCAAGGATACTACAGAAGGATCTCTTTGCTGACAAGGAGGGTACCTCTAAGGTTCCTTCAGATGGGATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
||
| CDS CAA 72 bp | GCCTGGGCTTTCCCAGAGAAATTTTTCCTCAGGAGTTaGCCTTTCTCTATCCCGTTGAAAATCACACTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AWAFPEKFFLRS*PFSIPLKITLL Trigger: CAGGAGTGTGATTTTCAACGGGATAGAGAAAGGCAAACTCCTGAGGAAAAATTTCTCTGGGAAAGCCCAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654101.1 |
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| CDS CAA 90 bp | AGATCACAGTTTCAAACCAGCCAACGTGGAGACAATCTTCAGTACTaGCTGAAAATGTGCTTTCACTGTAAGCTTCAGTGCCCTGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSQFQTSQRGDNLQY*LKMCFHCKLQCPGA Trigger: TGCTCCAGGGCACTGAAGCTTACAGTGAAAGCACATTTTCAGCAAGTACTGAAGATTGTCTCCACGTTGGCTGGTTTGAAACTGTGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424364.6 |
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| CDS CAA 90 bp | TTCCCAGAGAAATTTTTCCTCAGGAGTTTGCCTTTCTCTATCCCGTaGAAAATCACACTCCTGGAGAGAAGATCAGAGGAGCATGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: FPEKFFLRSLPFSIP*KITLLERRSEEHDP Trigger: AGGGTCATGCTCCTCTGATCTTCTCTCCAGGAGTGTGATTTTCAACGGGATAGAGAAAGGCAAACTCCTGAGGAAAAATTTCTCTGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654101.1 |
||
| CDS TCA 72 bp | AAACCAGCCAACGTGGAGACAATCTTCAGTACTTGCTaGAAATGTGCTTTCACTGTAAGCTTCAGTGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: KPANVETIFSTC*KCAFTVSFSAL Trigger: CAGGGCACTGAAGCTTACAGTGAAAGCACATTTTCAGCAAGTACTGAAGATTGTCTCCACGTTGGCTGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424364.6 ENST00000663645.1 |
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| CDS GCA 72 bp | GTGACTGAGTATTTCCTCCTTGGATCCACTCATATATaGCTAGGGCATATTACATCCTCACTGTGTCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VTEYFLLGSTHI*LGHITSSLCLW Trigger: CCACAGACACAGTGAGGATGTAATATGCCCTAGGCATATATGAGTGGATCCAAGGAGGAAATACTCAGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS CAA 72 bp | CCAAGTGTGTCTTTTCTATACTTGGAATTCACCCCGTaGCCTCTGGATTCTGTCTCTGTTAATCCGTTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: PSVSFLYLEFTP*PLDSVSVNPFR Trigger: TCGGAACGGATTAACAGAGACAGAATCCAGAGGCAACGGGGTGAATTCCAAGTATAGAAAAGACACACTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
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| CDS TCA 72 bp | GTGATGAACTGGAAGAATGATCCATCCCTCTTGTGTTaGCTGCCTTCCAAGAGCTACTCAGTAAATACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VMNWKNDPSLLC*LPSKSYSVNTC Trigger: GCAAGTATTTACTGAGTAGCTCTTGGAAGGCAGTCAACACAAGAGGGATGGATCATTCTTCCAGTTCATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
||
| CDS TCA 72 bp | AATTTTTCCTCAGGAGTTTGCCTTTCTCTATCCCGTTaGAAATCACACTCCTGGAGAGAAGATCAGAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: NFSSGVCLSLSR*KSHSWREDQRS Trigger: GCTCCTCTGATCTTCTCTCCAGGAGTGTGATTTTCAACGGGATAGAGAAAGGCAAACTCCTGAGGAAAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654101.1 |
||
| CDS GCA 72 bp | GTCACCTATTGTTTCCTTTGTAGAAATATGGAAGCATaGTCAGAGAAGTCAGTGACGTGGTTGAGATCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VTYCFLCRNMEA*SEKSVTWLRSH Trigger: GTGGGATCTCAACCACGTCACTGACTTCTCTGAGCATGCTTCCATATTTCTACAAAGGAAACAATAGGTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
||
| CDS CCA 72 bp | TGTCTTTTCTATACTTGGAATTCACCCCGTTGCCTCTaGATTCTGTCTCTGTTAATCCGTTCCGATGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CLFYTWNSPRCL*ILSLLIRSDES Trigger: AGACTCATCGGAACGGATTAACAGAGACAGAATCCAGAGGCAACGGGGTGAATTCCAAGTATAGAAAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
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| CDS CAA 90 bp | GAGTGGGCCTTATTCAACTTAGAACCCTTAGGACCTTGCAGAGAGTaGCGTTCAGAAGACCACTTTAATAATATCAGTTTTCTGCCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: EWALFNLEPLGPCRE*RSEDHFNNISFLPR Trigger: ACGAGGCAGAAAACTGATATTATTAAAGTGGTCTTCTGAACGCAACTCTCTGCAAGGTCCTAAGGGTTCTAAGTTGAATAAGGCCCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
||
| CDS TCA 72 bp | GAAAATCACACTCCTGGAGAGAAGATCAGAGGAGCATaGCCCTGTAAAAATCAGTCTGCTTGGGAATTACTT | + |
|
Preference number: 6 (lower is better) Translates to: ENHTPGEKIRGA*PCKNQSAWELL Trigger: AAGTAATTCCCAAGCAGACTGATTTTTACAGGGTCATGCTCCTCTGATCTTCTCTCCAGGAGTGTGATTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654101.1 |
||
| CDS TCA 72 bp | AAAAGAAGAAGCTGTCTCTCAGCACCAGGTTCTGTATaGAGGATACAACAGAAGCTAATATCCACCGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: KRRSCLSAPGSV*RIQQKLISTAS Trigger: AGATGCGGTGGATATTAGCTTCTGTTGTATCCTTCATACAGAACCTGGTGCTGAGAGACAGCTTCTTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000654895.1 ENST00000659406.1 ENST00000659655.1 ENST00000666151.1 ENST00000666737.1 |
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| CDS GCA 72 bp | GAGTGGGCCTTATTCAACTTAGAACCCTTAGGACCTTaGAGAGAGTTGCGTTCAGAAGACCACTTTAATAAT | + |
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Preference number: 6 (lower is better) Translates to: EWALFNLEPLGP*RELRSEDHFNN Trigger: ATTATTAAAGTGGTCTTCTGAACGCAACTCTCTGCAAGGTCCTAAGGGTTCTAAGTTGAATAAGGCCCACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
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| CDS CCA 72 bp | AAAACATTATTTACTAAAATAGGTGGTGAGCCAGATTaGCCCACAAGCCATAGTTTGGCAAACCCTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: KTLFTKIGGEPD*PTSHSLANPAA Trigger: TGCTGCAGGGTTTGCCAAACTATGGCTTGTGGGCCAATCTGGCTCACCACCTATTTTAGTAAATAATGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000414054.5 ENST00000435075.1 |
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| CDS CAA 72 bp | TTTCAAACCAGCCAACGTGGAGACAATCTTCAGTACTaGCTGAAAATGTGCTTTCACTGTAAGCTTCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: FQTSQRGDNLQY*LKMCFHCKLQC Trigger: GCACTGAAGCTTACAGTGAAAGCACATTTTCAGCAAGTACTGAAGATTGTCTCCACGTTGGCTGGTTTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424364.6 ENST00000663645.1 |
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| CDS CAA 72 bp | AAATTTTTCCTCAGGAGTTTGCCTTTCTCTATCCCGTaGAAAATCACACTCCTGGAGAGAAGATCAGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: KFFLRSLPFSIP*KITLLERRSEE Trigger: CTCCTCTGATCTTCTCTCCAGGAGTGTGATTTTCAACGGGATAGAGAAAGGCAAACTCCTGAGGAAAAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654101.1 |
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| CDS CAA 72 bp | TTGTGGCTTATCCTTTTGTTTTGTTGCCTGCATGCATaGGCTAGTAGACAATTGGTAGCAGGTGACAATGGT | + |
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Preference number: 6 (lower is better) Translates to: LWLILLFCCLHA*ASRQLVAGDNG Trigger: ACCATTGTCACCTGCTACCAATTGTCTACTAGCCAATGCATGCAGGCAACAAAACAAAAGGATAAGCCACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000654895.1 ENST00000659406.1 ENST00000659655.1 ENST00000666151.1 |
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| CDS TCA 72 bp | TCCCAGGTTGGTTCAAAGGTAATGAGTTACCTCAATTaGTTGTTCACAGTCAGTTACGGATCCAATTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SQVGSKVMSYLN*LFTVSYGSNSL Trigger: CAAGGAATTGGATCCGTAACTGACTGTGAACAATCAATTGAGGTAACTCATTACCTTTGAACCAACCTGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654895.1 ENST00000659406.1 ENST00000659655.1 ENST00000666151.1 ENST00000666737.1 |
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| CDS CAA 72 bp | CTCCCAGGTTGGTTCAAAGGTAATGAGTTACCTCAATaGATTGTTCACAGTCAGTTACGGATCCAATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LPGWFKGNELPQ*IVHSQLRIQFL Trigger: AAGGAATTGGATCCGTAACTGACTGTGAACAATCAATTGAGGTAACTCATTACCTTTGAACCAACCTGGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654895.1 ENST00000659406.1 ENST00000659655.1 ENST00000666151.1 ENST00000666737.1 |
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| CDS TCA 72 bp | GTTAGCTGTGCAATCGAAGACAAGTTGTTTAACCTTTaGAGCCACTGTTTTCTCATCTGTCAAGGAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: VSCAIEDKLFNL*SHCFLICQGER Trigger: TCTTTCTCCTTGACAGATGAGAAAACAGTGGCTTCAAAGGTTAAACAACTTGTCTTCGATTGCACAGCTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000414054.5 ENST00000424364.6 ENST00000435075.1 ENST00000654101.1 ENST00000663645.1 |
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| CDS CCA 72 bp | GAAAATCTTCTCTTCAGAAGGCATGGTGTAAAGAGATaGATAGGTAGAATCTCTTCCTACAATCCTCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: ENLLFRRHGVKR*IGRISSYNPLA Trigger: TGCAAGAGGATTGTAGGAAGAGATTCTACCTATCCATCTCTTTACACCATGCCTTCTGAAGAGAAGATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655718.1 ENST00000660594.1 ENST00000663506.1 |
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| CDS TCA 72 bp | AACACAGGTGTCACACGGATTTTCAGGAGGATTAAATaGGTAAATAGGTGTAAAACACTTACTGCTTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: NTGVTRIFRRIK*VNRCKTLTAWY Trigger: GTACCAAGCAGTAAGTGTTTTACACCTATTTACTCATTTAATCCTCCTGAAAATCCGTGTGACACCTGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663772.1 |
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| CDS GCA 72 bp | GGTAGAATCTCTTCCTACAATCCTCTTGCAGCTAATTaGCAGACAATTTACATGAGCACATATAACAGTATC | + |
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Preference number: 6 (lower is better) Translates to: GRISSYNPLAAN*QTIYMSTYNSI Trigger: GATACTGTTATATGTGCTCATGTAAATTGTCTGGCAATTAGCTGCAAGAGGATTGTAGGAAGAGATTCTACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655718.1 ENST00000660594.1 ENST00000663506.1 |
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| CDS CCA 72 bp | TACATTCAAAAGATCACAGTTTCAAACCAGCCAACGTaGAGACAATCTTCAGTACTTGCTGAAAATGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: YIQKITVSNQPT*RQSSVLAENVL Trigger: AAGCACATTTTCAGCAAGTACTGAAGATTGTCTCCACGTTGGCTGGTTTGAAACTGTGATCTTTTGAATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424364.6 |
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| CDS CAA 72 bp | GTTTCCAAGGCTTTGGTTGTTCTTGTTCTTATTTACTaGTGGCTTATCCTTTTGTTTTGTTGCCTGCATGCA | + |
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Preference number: 6 (lower is better) Translates to: VSKALVVLVLIY*WLILLFCCLHA Trigger: TGCATGCAGGCAACAAAACAAAAGGATAAGCCACAAGTAAATAAGAACAAGAACAACCAAAGCCTTGGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000654895.1 ENST00000659406.1 ENST00000659655.1 ENST00000666151.1 |
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| CDS TCA 72 bp | TCACAGAGACATTGGGAGGATAATAAGAGAAAGCTGTaGAAAGGTGATCAATATATTTCAGCTAATAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SQRHWEDNKRKL*KGDQYISANKL Trigger: GAGCTTATTAGCTGAAATATATTGATCACCTTTTCACAGCTTTCTCTTATTATCCTCCCAATGTCTCTGTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654101.1 ENST00000663645.1 |
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| CDS CAA 72 bp | TTTCTGGTAGACACAACTTTATTGCTCTGGTGGGACTaGATTTTAACTGTTGTATCAGGTAAGATATTAGTG | + |
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Preference number: 6 (lower is better) Translates to: FLVDTTLLLWWD*ILTVVSGKILV Trigger: CACTAATATCTTACCTGATACAACAGTTAAAATCAAGTCCCACCAGAGCAATAAAGTTGTGTCTACCAGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654101.1 |
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| CDS CAA 72 bp | TTATTCAACTTAGAACCCTTAGGACCTTGCAGAGAGTaGCGTTCAGAAGACCACTTTAATAATATCAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LFNLEPLGPCRE*RSEDHFNNISF Trigger: AAAACTGATATTATTAAAGTGGTCTTCTGAACGCAACTCTCTGCAAGGTCCTAAGGGTTCTAAGTTGAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000648808.2 ENST00000657199.1 ENST00000663772.1 |
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