Pregenerated sensors for LINC00482 (Homo sapiens)
Ensembl gene IDs: ENSG00000185168Ensembl transcript IDs: ENST00000332012.5, ENST00000577000.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATCCTGGCGCGCAGGCCAGGCCGCCGCCCGGGTTTGAGGCCTTGCTaGTCCCTTGCTGCCCCCAGCCACCCGCACACTCTCACGGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: ILARRPGRRPGLRPC*SLAAPSHPHTLTEP Trigger: GGGCTCCGTGAGAGTGTGCGGGTGGCTGGGGGCAGCAAGGGAGCAGCAAGGCCTCAAACCCGGGCGGCGGCCTGGCCTGCGCGCCAGGAT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS GCA 90 bp | CAGGCCAGGCCGCCGCCCGGGTTTGAGGCCTTGCTGCTCCCTTGCTaGCCCCAGCCACCCGCACACTCTCACGGAGCCCAGCTCACGACA | + |
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Preference number: 5 (lower is better) Translates to: QARPPPGFEALLLPC*PQPPAHSHGAQLTT Trigger: TGTCGTGAGCTGGGCTCCGTGAGAGTGTGCGGGTGGCTGGGGGCAGCAAGGGAGCAGCAAGGCCTCAAACCCGGGCGGCGGCCTGGCCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS TCA 90 bp | GGCAGAGGTTGGGCGAGGCGGCCGCAGGCCAACAGACGCCAAGGATaGTCTCAGCCTGTGGAAGAGGGGGCGGCCCAGGACAGTCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: GRGWARRPQANRRQG*SQPVEEGAAQDSPG Trigger: GCCCGGACTGTCCTGGGCCGCCCCCTCTTCCACAGGCTGAGATCATCCTTGGCGTCTGTTGGCCTGCGGCCGCCTCGCCCAACCTCTGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 90 bp | CCCTTCCAGCCTGCCCCACCAGGCGGCCGCTCTGGTCCAGGGGCCTaGGTTTGGTCCCTTCCTTGGGCACTTGCAGGCGCTCTTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: PFQPAPPGGRSGPGA*VWSLPWALAGALPG Trigger: GCCAGGAAGAGCGCCTGCAAGTGCCCAAGGAAGGGACCAAACCCAGGCCCCTGGACCAGAGCGGCCGCCTGGTGGGGCAGGCTGGAAGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 90 bp | CGAGGCGGCCGCAGGCCAACAGACGCCAAGGATGATCTCAGCCTGTaGAAGAGGGGGCGGCCCAGGACAGTCCGGGCTCACGGCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: RGGRRPTDAKDDLSL*KRGRPRTVRAHGLR Trigger: CCTGAGGCCGTGAGCCCGGACTGTCCTGGGCCGCCCCCTCTTCCACAGGCTGAGATCATCCTTGGCGTCTGTTGGCCTGCGGCCGCCTCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS TCA 90 bp | CAGGCTCCCGGCCCTGGGAGCTGTAGGAGGACACCTGTGCTGTTGTaGGCCTGCCACCCTGGGGTCCTCCATGTGGCAGCCCAGGACCCC | + |
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Preference number: 5 (lower is better) Translates to: QAPGPGSCRRTPVLL*ACHPGVLHVAAQDP Trigger: GGGGTCCTGGGCTGCCACATGGAGGACCCCAGGGTGGCAGGCTCACAACAGCACAGGTGTCCTCCTACAGCTCCCAGGGCCGGGAGCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577000.1 |
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| CDS CCA 90 bp | CCAGGCGGCCGCTCTGGTCCAGGGGCCTGGGTTTGGTCCCTTCCTTaGGCACTTGCAGGCGCTCTTCCTGGCCTGTCTGCCCTCTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: PGGRSGPGAWVWSLP*ALAGALPGLSALCP Trigger: AGGGCAGAGGGCAGACAGGCCAGGAAGAGCGCCTGCAAGTGCCCAAGGAAGGGACCAAACCCAGGCCCCTGGACCAGAGCGGCCGCCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 90 bp | CAGCCTGCCCCACCAGGCGGCCGCTCTGGTCCAGGGGCCTGGGTTTaGTCCCTTCCTTGGGCACTTGCAGGCGCTCTTCCTGGCCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: QPAPPGGRSGPGAWV*SLPWALAGALPGLS Trigger: AGACAGGCCAGGAAGAGCGCCTGCAAGTGCCCAAGGAAGGGACCAAACCCAGGCCCCTGGACCAGAGCGGCCGCCTGGTGGGGCAGGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 90 bp | CTGGAGCTGCTGACATCTGGGCCGGCCACAGTGCCTTCGAGGGCCTaGTTGGTCTCTGAGGCACGGCATCCTGCAGCTGAGGGCCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: LELLTSGPATVPSRA*LVSEARHPAAEGLP Trigger: GGGAAGGCCCTCAGCTGCAGGATGCCGTGCCTCAGAGACCAACCAGGCCCTCGAAGGCACTGTGGCCGGCCCAGATGTCAGCAGCTCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS TCA 90 bp | GGGGGAGCAGTGAACGGAGCTGGGCCCGCTTCAGGGATCTCGGCATaGGATGAAGGCAGAGGCCAGAGTGATGGGGCCACAGGCCGAGGA | + |
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Preference number: 5 (lower is better) Translates to: GGAVNGAGPASGISA*DEGRGQSDGATGRG Trigger: TCCTCGGCCTGTGGCCCCATCACTCTGGCCTCTGCCTTCATCTCATGCCGAGATCCCTGAAGCGGGCCCAGCTCCGTTCACTGCTCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS GCA 90 bp | GTGTACATCCCTGGAGGCTGCGGTTGGGGAGGTGGTGGGATGAGCTaGCCTGTACCATGGCTGCGTGTGGGAAACAGCAGGAGGCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: VYIPGGCGWGGGGMS*PVPWLRVGNSRRPG Trigger: CCCCGGCCTCCTGCTGTTTCCCACACGCAGCCATGGTACAGGGCAGCTCATCCCACCACCTCCCCAACCGCAGCCTCCAGGGATGTACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS TCA 90 bp | CAGATCCAGACACCAACATGCACACAGGGAGGACCCGTGTGGACATaGGGGCAGAGGTTGGGCGAGGCGGCCGCAGGCCAACAGACGCCA | + |
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Preference number: 5 (lower is better) Translates to: QIQTPTCTQGGPVWT*GQRLGEAAAGQQTP Trigger: TGGCGTCTGTTGGCCTGCGGCCGCCTCGCCCAACCTCTGCCCTCATGTCCACACGGGTCCTCCCTGTGTGCATGTTGGTGTCTGGATCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS GCA 90 bp | CCCATGGCCAGACGGGATTCCTGTTGGGCTCCCGAGCTCTGGAAATaGGGCCGCTGCTCTGCAAATGTGCCTTCTCTGGGCCCTTCCGCC | + |
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Preference number: 5 (lower is better) Translates to: PMARRDSCWAPELWK*GRCSANVPSLGPSA Trigger: GGCGGAAGGGCCCAGAGAAGGCACATTTGCAGAGCAGCGGCCGCATTTCCAGAGCTCGGGAGCCCAACAGGAATCCCGTCTGGCCATGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS TCA 90 bp | GTACCATGGCTGCGTGTGGGAAACAGCAGGAGGCCGGGGGAGCAGTaGACGGAGCTGGGCCCGCTTCAGGGATCTCGGCATGAGATGAAG | + |
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Preference number: 5 (lower is better) Translates to: VPWLRVGNSRRPGEQ*TELGPLQGSRHEMK Trigger: CTTCATCTCATGCCGAGATCCCTGAAGCGGGCCCAGCTCCGTTCACTGCTCCCCCGGCCTCCTGCTGTTTCCCACACGCAGCCATGGTAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 90 bp | GGTGGTCCCATGGCCAGACGGGATTCCTGTTGGGCTCCCGAGCTCTaGAAATGCGGCCGCTGCTCTGCAAATGTGCCTTCTCTGGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: GGPMARRDSCWAPEL*KCGRCSANVPSLGP Trigger: AGGGCCCAGAGAAGGCACATTTGCAGAGCAGCGGCCGCATTTCCAGAGCTCGGGAGCCCAACAGGAATCCCGTCTGGCCATGGGACCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS GCA 90 bp | AGACGGGATTCCTGTTGGGCTCCCGAGCTCTGGAAATGCGGCCGCTaGTCTGCAAATGTGCCTTCTCTGGGCCCTTCCGCCCTTCGAGTC | + |
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Preference number: 5 (lower is better) Translates to: RRDSCWAPELWKCGR*SANVPSLGPSALRV Trigger: GACTCGAAGGGCGGAAGGGCCCAGAGAAGGCACATTTGCAGAGCAGCGGCCGCATTTCCAGAGCTCGGGAGCCCAACAGGAATCCCGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS GCA 90 bp | GGATTCCTGTTGGGCTCCCGAGCTCTGGAAATGCGGCCGCTGCTCTaGAAATGTGCCTTCTCTGGGCCCTTCCGCCCTTCGAGTCCATCT | + |
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Preference number: 5 (lower is better) Translates to: GFLLGSRALEMRPLL*KCAFSGPFRPSSPS Trigger: AGATGGACTCGAAGGGCGGAAGGGCCCAGAGAAGGCACATTTGCAGAGCAGCGGCCGCATTTCCAGAGCTCGGGAGCCCAACAGGAATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 90 bp | TCCATGTGGCAGCCCAGGACCCCAGTGTTCTTTGTTCAGTGGTTCTaGGGTCTCCGAGGTGCTGGGAAGCACAGGTGTGGGGGACCTCAA | + |
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Preference number: 5 (lower is better) Translates to: SMWQPRTPVFFVQWF*GLRGAGKHRCGGPQ Trigger: TTGAGGTCCCCCACACCTGTGCTTCCCAGCACCTCGGAGACCCCAGAACCACTGAACAAAGAACACTGGGGTCCTGGGCTGCCACATGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000577000.1 |
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| CDS GCA 90 bp | GTGCGACACTTTTGGAGAACCACAGGAATGTCCTTGATTAAAGCGTaGGCAGGGAGAAACGTGGCCTTGTTCCCACAGATGCCCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: VRHFWRTTGMSLIKA*AGRNVALFPQMPTR Trigger: CCTGGTGGGCATCTGTGGGAACAAGGCCACGTTTCTCCCTGCGCACGCTTTAATCAAGGACATTCCTGTGGTTCTCCAAAAGTGTCGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS TCA 90 bp | ACCCATGTAGTGTGCGACACTTTTGGAGAACCACAGGAATGTCCTTaGTTAAAGCGTGCGCAGGGAGAAACGTGGCCTTGTTCCCACAGA | + |
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Preference number: 5 (lower is better) Translates to: THVVCDTFGEPQECP*LKRAQGETWPCSHR Trigger: TCTGTGGGAACAAGGCCACGTTTCTCCCTGCGCACGCTTTAATCAAGGACATTCCTGTGGTTCTCCAAAAGTGTCGCACACTACATGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS TCA 90 bp | TCTCTGCATGCCAGGGTAGAGTTGTGGCCCCCAAAATTCACATGTTaGAGTCCAGGACCTCAGAATGGGACCTTATTGGGAAATAGGATC | + |
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Preference number: 5 (lower is better) Translates to: SLHARVELWPPKFTC*SPGPQNGTLLGNRI Trigger: GATCCTATTTCCCAATAAGGTCCCATTCTGAGGTCCTGGACTTCAACATGTGAATTTTGGGGGCCACAACTCTACCCTGGCATGCAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 90 bp | CAAAATTCACATGTTGAAGTCCAGGACCTCAGAATGGGACCTTATTaGGAAATAGGATCACTGCTGACTATACTTAGTTACGATGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: QNSHVEVQDLRMGPY*EIGSLLTILSYDEA Trigger: GGCCTCATCGTAACTAAGTATAGTCAGCAGTGATCCTATTTCCCAATAAGGTCCCATTCTGAGGTCCTGGACTTCAACATGTGAATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CAA 90 bp | GCACATCCTGGCGCGCAGGCCAGGCCGCCGCCCGGGTTTGAGGCCTaGCTGCTCCCTTGCTGCCCCCAGCCACCCGCACACTCTCACGGA | + |
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Preference number: 6 (lower is better) Translates to: AHPGAQARPPPGFEA*LLPCCPQPPAHSHG Trigger: TCCGTGAGAGTGTGCGGGTGGCTGGGGGCAGCAAGGGAGCAGCAAGGCCTCAAACCCGGGCGGCGGCCTGGCCTGCGCGCCAGGATGTGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS GCA 72 bp | CCGCCGCCCGGGTTTGAGGCCTTGCTGCTCCCTTGCTaGCCCCAGCCACCCGCACACTCTCACGGAGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PPPGFEALLLPC*PQPPAHSHGAQ Trigger: CTGGGCTCCGTGAGAGTGTGCGGGTGGCTGGGGGCAGCAAGGGAGCAGCAAGGCCTCAAACCCGGGCGGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CAA 90 bp | CCAGCCTGCCCCACCAGGCGGCCGCTCTGGTCCAGGGGCCTGGGTTaGGTCCCTTCCTTGGGCACTTGCAGGCGCTCTTCCTGGCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: PACPTRRPLWSRGLG*VPSLGTCRRSSWPV Trigger: GACAGGCCAGGAAGAGCGCCTGCAAGTGCCCAAGGAAGGGACCAAACCCAGGCCCCTGGACCAGAGCGGCCGCCTGGTGGGGCAGGCTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CAA 90 bp | ACCAGGCGGCCGCTCTGGTCCAGGGGCCTGGGTTTGGTCCCTTCCTaGGGCACTTGCAGGCGCTCTTCCTGGCCTGTCTGCCCTCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: TRRPLWSRGLGLVPS*GTCRRSSWPVCPLP Trigger: GGGCAGAGGGCAGACAGGCCAGGAAGAGCGCCTGCAAGTGCCCAAGGAAGGGACCAAACCCAGGCCCCTGGACCAGAGCGGCCGCCTGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS TCA 72 bp | TGGGCGAGGCGGCCGCAGGCCAACAGACGCCAAGGATaGTCTCAGCCTGTGGAAGAGGGGGCGGCCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: WARRPQANRRQG*SQPVEEGAAQD Trigger: GTCCTGGGCCGCCCCCTCTTCCACAGGCTGAGATCATCCTTGGCGTCTGTTGGCCTGCGGCCGCCTCGCCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 72 bp | CTGCGGCATCCCCCAGCCCCAAGGGCGGTGGTCCCATaGCCAGACGGGATTCCTGTTGGGCTCCCGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LRHPPAPRAVVP*PDGIPVGLPSS Trigger: AGAGCTCGGGAGCCCAACAGGAATCCCGTCTGGCCATGGGACCACCGCCCTTGGGGCTGGGGGATGCCGCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 72 bp | CATCTGGGCCGGCCACAGTGCCTTCGAGGGCCTGGTTaGTCTCTGAGGCACGGCATCCTGCAGCTGAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: HLGRPQCLRGPG*SLRHGILQLRA Trigger: GGCCCTCAGCTGCAGGATGCCGTGCCTCAGAGACCAACCAGGCCCTCGAAGGCACTGTGGCCGGCCCAGATG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 72 bp | CCACCAGGCGGCCGCTCTGGTCCAGGGGCCTGGGTTTaGTCCCTTCCTTGGGCACTTGCAGGCGCTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PPGGRSGPGAWV*SLPWALAGALP Trigger: AGGAAGAGCGCCTGCAAGTGCCCAAGGAAGGGACCAAACCCAGGCCCCTGGACCAGAGCGGCCGCCTGGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 72 bp | CACAGGGAGGACCCGTGTGGACATGAGGGCAGAGGTTaGGCGAGGCGGCCGCAGGCCAACAGACGCCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: HREDPCGHEGRG*ARRPQANRRQG Trigger: TCCTTGGCGTCTGTTGGCCTGCGGCCGCCTCGCCCAACCTCTGCCCTCATGTCCACACGGGTCCTCCCTGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS TCA 72 bp | CTGCGTGTGGGAAACAGCAGGAGGCCGGGGGAGCAGTaGACGGAGCTGGGCCCGCTTCAGGGATCTCGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LRVGNSRRPGEQ*TELGPLQGSRH Trigger: ATGCCGAGATCCCTGAAGCGGGCCCAGCTCCGTTCACTGCTCCCCCGGCCTCCTGCTGTTTCCCACACGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS GCA 72 bp | AGGCTCCCGGCCCTGGGAGCTGTAGGAGGACACCTGTaGTGTTGTGAGCCTGCCACCCTGGGGTCCTCCATG | + |
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Preference number: 6 (lower is better) Translates to: RLPALGAVGGHL*CCEPATLGSSM Trigger: CATGGAGGACCCCAGGGTGGCAGGCTCACAACAGCACAGGTGTCCTCCTACAGCTCCCAGGGCCGGGAGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577000.1 |
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| CDS CCA 72 bp | GGTTGGGGAGGTGGTGGGATGAGCTGCCCTGTACCATaGCTGCGTGTGGGAAACAGCAGGAGGCCGGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: GWGGGGMSCPVP*LRVGNSRRPGE Trigger: CTCCCCCGGCCTCCTGCTGTTTCCCACACGCAGCCATGGTACAGGGCAGCTCATCCCACCACCTCCCCAACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 72 bp | CGCTCTGGTCCAGGGGCCTGGGTTTGGTCCCTTCCTTaGGCACTTGCAGGCGCTCTTCCTGGCCTGTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RSGPGAWVWSLP*ALAGALPGLSA Trigger: GGCAGACAGGCCAGGAAGAGCGCCTGCAAGTGCCCAAGGAAGGGACCAAACCCAGGCCCCTGGACCAGAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 72 bp | GGGCTCACGGCCTCAGGGAGCCACCCCGATGGGCTCTaGCCTCGGGAACTGCGAGGCAGTTTCTGTTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: GLTASGSHPDGL*PRELRGSFCCV Trigger: CACACAACAGAAACTGCCTCGCAGTTCCCGAGGCCAGAGCCCATCGGGGTGGCTCCCTGAGGCCGTGAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 72 bp | CGCAGGCCAACAGACGCCAAGGATGATCTCAGCCTGTaGAAGAGGGGGCGGCCCAGGACAGTCCGGGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: RRPTDAKDDLSL*KRGRPRTVRAH Trigger: GTGAGCCCGGACTGTCCTGGGCCGCCCCCTCTTCCACAGGCTGAGATCATCCTTGGCGTCTGTTGGCCTGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CAA 72 bp | ACATCTGGGCCGGCCACAGTGCCTTCGAGGGCCTGGTaGGTCTCTGAGGCACGGCATCCTGCAGCTGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: TSGPATVPSRAW*VSEARHPAAEG Trigger: GCCCTCAGCTGCAGGATGCCGTGCCTCAGAGACCAACCAGGCCCTCGAAGGCACTGTGGCCGGCCCAGATGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CAA 72 bp | CAAGGGCGGTGGTCCCATGGCCAGACGGGATTCCTGTaGGGCTCCCGAGCTCTGGAAATGCGGCCGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: QGRWSHGQTGFL*GSRALEMRPLL Trigger: GAGCAGCGGCCGCATTTCCAGAGCTCGGGAGCCCAACAGGAATCCCGTCTGGCCATGGGACCACCGCCCTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CAA 72 bp | GTCCAGGGGCCTGGGTTTGGTCCCTTCCTTGGGCACTaGCAGGCGCTCTTCCTGGCCTGTCTGCCCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: VQGPGFGPFLGH*QALFLACLPSA Trigger: GGCAGAGGGCAGACAGGCCAGGAAGAGCGCCTGCAAGTGCCCAAGGAAGGGACCAAACCCAGGCCCCTGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CAA 90 bp | CCCCAGCCCCAAGGGCGGTGGTCCCATGGCCAGACGGGATTCCTGTaGGGCTCCCGAGCTCTGGAAATGCGGCCGCTGCTCTGCAAATGT | + |
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Preference number: 6 (lower is better) Translates to: PQPQGRWSHGQTGFL*GSRALEMRPLLCKC Trigger: ACATTTGCAGAGCAGCGGCCGCATTTCCAGAGCTCGGGAGCCCAACAGGAATCCCGTCTGGCCATGGGACCACCGCCCTTGGGGCTGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS TCA 72 bp | ACACCAACATGCACACAGGGAGGACCCGTGTGGACATaGGGGCAGAGGTTGGGCGAGGCGGCCGCAGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: TPTCTQGGPVWT*GQRLGEAAAGQ Trigger: TTGGCCTGCGGCCGCCTCGCCCAACCTCTGCCCTCATGTCCACACGGGTCCTCCCTGTGTGCATGTTGGTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 72 bp | AAGGGCGGTGGTCCCATGGCCAGACGGGATTCCTGTTaGGCTCCCGAGCTCTGGAAATGCGGCCGCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: KGGGPMARRDSC*APELWKCGRCS Trigger: AGAGCAGCGGCCGCATTTCCAGAGCTCGGGAGCCCAACAGGAATCCCGTCTGGCCATGGGACCACCGCCCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS GCA 72 bp | TCCTGTTGGGCTCCCGAGCTCTGGAAATGCGGCCGCTaGTCTGCAAATGTGCCTTCTCTGGGCCCTTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: SCWAPELWKCGR*SANVPSLGPSA Trigger: GGCGGAAGGGCCCAGAGAAGGCACATTTGCAGAGCAGCGGCCGCATTTCCAGAGCTCGGGAGCCCAACAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS TCA 72 bp | GTGAACGGAGCTGGGCCCGCTTCAGGGATCTCGGCATaGGATGAAGGCAGAGGCCAGAGTGATGGGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: VNGAGPASGISA*DEGRGQSDGAT Trigger: TGTGGCCCCATCACTCTGGCCTCTGCCTTCATCTCATGCCGAGATCCCTGAAGCGGGCCCAGCTCCGTTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332012.5 ENST00000577000.1 |
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| CDS CCA 72 bp | GGCCCTGTGGACACCTTGGTTTCAGGCTCCCGGCCCTaGGAGCTGGGACCACAGGTGCACATGGCTAATTCT | + |
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Preference number: 6 (lower is better) Translates to: GPVDTLVSGSRP*ELGPQVHMANS Trigger: AGAATTAGCCATGTGCACCTGTGGTCCCAGCTCCCAGGGCCGGGAGCCTGAAACCAAGGTGTCCACAGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS GCA 72 bp | AGACGGGATTCCTGTTGGGCTCCCGAGCTCTGGAAATaGGGCCGCTGCTCTGCAAATGTGCCTTCTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: RRDSCWAPELWK*GRCSANVPSLG Trigger: GCCCAGAGAAGGCACATTTGCAGAGCAGCGGCCGCATTTCCAGAGCTCGGGAGCCCAACAGGAATCCCGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 72 bp | ATCTGTCCCAGCCTAATTGCTGGAGCTGCTGACATCTaGGCCGGCCACAGTGCCTTCGAGGGCCTGGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: ICPSLIAGAADI*AGHSAFEGLVG Trigger: ACCAACCAGGCCCTCGAAGGCACTGTGGCCGGCCCAGATGTCAGCAGCTCCAGCAATTAGGCTGGGACAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 72 bp | CAGCCCAGGACCCCAGTGTTCTTTGTTCAGTGGTTCTaGGGTCTCCGAGGTGCTGGGAAGCACAGGTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: QPRTPVFFVQWF*GLRGAGKHRCG Trigger: CCCACACCTGTGCTTCCCAGCACCTCGGAGACCCCAGAACCACTGAACAAAGAACACTGGGGTCCTGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577000.1 |
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| CDS TCA 72 bp | GGCTCAGACACCCTCCAGCCCGTCGCTCGCTCCAGATaGGGAGGGCCACAGGGTATTTTCCACGAGGAATTT | + |
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Preference number: 6 (lower is better) Translates to: GSDTLQPVARSR*GGPQGIFHEEF Trigger: AAATTCCTCGTGGAAAATACCCTGTGGCCCTCCTCATCTGGAGCGAGCGACGGGCTGGAGGGTGTCTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 72 bp | ATGGCCAGACGGGATTCCTGTTGGGCTCCCGAGCTCTaGAAATGCGGCCGCTGCTCTGCAAATGTGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: MARRDSCWAPEL*KCGRCSANVPS Trigger: AGAAGGCACATTTGCAGAGCAGCGGCCGCATTTCCAGAGCTCGGGAGCCCAACAGGAATCCCGTCTGGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CAA 72 bp | TCCTTGATTAAAGCGTGCGCAGGGAGAAACGTGGCCTaGTTCCCACAGATGCCCACCAGGGTCCCTCACCTG | + |
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Preference number: 6 (lower is better) Translates to: SLIKACAGRNVA*FPQMPTRVPHL Trigger: CAGGTGAGGGACCCTGGTGGGCATCTGTGGGAACAAGGCCACGTTTCTCCCTGCGCACGCTTTAATCAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CAA 72 bp | TGGGCTCTGGCCTCGGGAACTGCGAGGCAGTTTCTGTaGTGTGAAGCTCCCCAGTCTGTGGACCTTGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: WALASGTARQFL*CEAPQSVDLVP Trigger: AGGAACAAGGTCCACAGACTGGGGAGCTTCACACAACAGAAACTGCCTCGCAGTTCCCGAGGCCAGAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS GCA 72 bp | AGTGTTCTTTGTTCAGTGGTTCTGGGGTCTCCGAGGTaGTGGGAAGCACAGGTGTGGGGGACCTCAAGACAG | + |
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Preference number: 6 (lower is better) Translates to: SVLCSVVLGSPR*WEAQVWGTSRQ Trigger: CTGTCTTGAGGTCCCCCACACCTGTGCTTCCCAGCACCTCGGAGACCCCAGAACCACTGAACAAAGAACACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000577000.1 |
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| CDS CCA 72 bp | CGAGGCAGTTTCTGTTGTGTGAAGCTCCCCAGTCTGTaGACCTTGTTCCTGCAGCTCGGGAAACTCACACCG | + |
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Preference number: 6 (lower is better) Translates to: RGSFCCVKLPSL*TLFLQLGKLTP Trigger: CGGTGTGAGTTTCCCGAGCTGCAGGAACAAGGTCCACAGACTGGGGAGCTTCACACAACAGAAACTGCCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CAA 90 bp | AGGGTATTTTCCACGAGGAATTTAGAAATAGCTGTCGGCAGAGCCTaGGTAGGCAGGCTCCCTGTACCCAGGACCCTCACACCCACGTCC | + |
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Preference number: 6 (lower is better) Translates to: RVFSTRNLEIAVGRA*VGRLPVPRTLTPTS Trigger: GGACGTGGGTGTGAGGGTCCTGGGTACAGGGAGCCTGCCTACCAAGGCTCTGCCGACAGCTATTTCTAAATTCCTCGTGGAAAATACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 72 bp | TGGACACCTTGGTTTCAGGCTCCCGGCCCTGGGAGCTaGGACCACAGGTGCACATGGCTAATTCTTGTATTT | + |
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Preference number: 6 (lower is better) Translates to: WTPWFQAPGPGS*DHRCTWLILVF Trigger: AAATACAAGAATTAGCCATGTGCACCTGTGGTCCCAGCTCCCAGGGCCGGGAGCCTGAAACCAAGGTGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CAA 72 bp | TCCACGAGGAATTTAGAAATAGCTGTCGGCAGAGCCTaGGTAGGCAGGCTCCCTGTACCCAGGACCCTCACA | + |
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Preference number: 6 (lower is better) Translates to: STRNLEIAVGRA*VGRLPVPRTLT Trigger: TGTGAGGGTCCTGGGTACAGGGAGCCTGCCTACCAAGGCTCTGCCGACAGCTATTTCTAAATTCCTCGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CAA 90 bp | CACCCATGTAGTGTGCGACACTTTTGGAGAACCACAGGAATGTCCTaGATTAAAGCGTGCGCAGGGAGAAACGTGGCCTTGTTCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: HPCSVRHFWRTTGMS*IKACAGRNVALFPQ Trigger: CTGTGGGAACAAGGCCACGTTTCTCCCTGCGCACGCTTTAATCAAGGACATTCCTGTGGTTCTCCAAAAGTGTCGCACACTACATGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS TCA 72 bp | GTGTGCGACACTTTTGGAGAACCACAGGAATGTCCTTaGTTAAAGCGTGCGCAGGGAGAAACGTGGCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: VCDTFGEPQECP*LKRAQGETWPC Trigger: ACAAGGCCACGTTTCTCCCTGCGCACGCTTTAATCAAGGACATTCCTGTGGTTCTCCAAAAGTGTCGCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS TCA 72 bp | GCCAGGGTAGAGTTGTGGCCCCCAAAATTCACATGTTaGAGTCCAGGACCTCAGAATGGGACCTTATTGGGA | + |
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Preference number: 6 (lower is better) Translates to: ARVELWPPKFTC*SPGPQNGTLLG Trigger: TCCCAATAAGGTCCCATTCTGAGGTCCTGGACTTCAACATGTGAATTTTGGGGGCCACAACTCTACCCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CAA 72 bp | AGTGTGCGACACTTTTGGAGAACCACAGGAATGTCCTaGATTAAAGCGTGCGCAGGGAGAAACGTGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SVRHFWRTTGMS*IKACAGRNVAL Trigger: CAAGGCCACGTTTCTCCCTGCGCACGCTTTAATCAAGGACATTCCTGTGGTTCTCCAAAAGTGTCGCACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS GCA 72 bp | TTTTGGAGAACCACAGGAATGTCCTTGATTAAAGCGTaGGCAGGGAGAAACGTGGCCTTGTTCCCACAGATG | + |
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Preference number: 6 (lower is better) Translates to: FWRTTGMSLIKA*AGRNVALFPQM Trigger: CATCTGTGGGAACAAGGCCACGTTTCTCCCTGCGCACGCTTTAATCAAGGACATTCCTGTGGTTCTCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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| CDS CCA 72 bp | CATGTTGAAGTCCAGGACCTCAGAATGGGACCTTATTaGGAAATAGGATCACTGCTGACTATACTTAGTTAC | + |
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Preference number: 6 (lower is better) Translates to: HVEVQDLRMGPY*EIGSLLTILSY Trigger: GTAACTAAGTATAGTCAGCAGTGATCCTATTTCCCAATAAGGTCCCATTCTGAGGTCCTGGACTTCAACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332012.5 |
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