Pregenerated sensors for LINC00477 (Homo sapiens)

Ensembl gene IDs: ENSG00000197503

Ensembl transcript IDs: ENST00000483544.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 90 bp	GGTATCAGTCTTGCTGTCTCAGGAGTGGCAGAAGTGGAAGAAAATTaGTGTGTAAGAGAAGCCACGCGTGCAACCCGAAAGTGGACTTCC	+
Preference number: 6 (lower is better) Translates to: GISLAVSGVAEVEEN*CVREATRATRKWTS Trigger: GGAAGTCCACTTTCGGGTTGCACGCGTGGCTTCTCTTACACACAAATTTTCTTCCACTTCTGCCACTCCTGAGACAGCAAGACTGATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483544.1
CDS CAA 90 bp	TGGAAGTGGATCATCGTAAAGGTCGTCATCCTCATCATCTTCATGTaGAGTAGGCCAAGGAGGAGGAGGAAAATAAGGTATCAGTCTTGC	+
Preference number: 6 (lower is better) Translates to: WKWIIVKVVILIIFM*SRPRRRRKIRYQSC Trigger: GCAAGACTGATACCTTATTTTCCTCCTCCTCCTTGGCCTACTCAACATGAAGATGATGAGGATGACGACCTTTACGATGATCCACTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483544.1
CDS CAA 90 bp	ATCCCATCTCTACTGTCTCGTCAAATGCAATGTCCATATCAAATTTaGAAAGTGAGCTTCTCAAAACCAGCCAGTGTTGAAAAAGTATTT	+
Preference number: 6 (lower is better) Translates to: IPSLLSRQMQCPYQI*KVSFSKPASVEKVF Trigger: AAATACTTTTTCAACACTGGCTGGTTTTGAGAAGCTCACTTTCAAAATTTGATATGGACATTGCATTTGACGAGACAGTAGAGATGGGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483544.1

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