Pregenerated sensors for LINC00470 (Homo sapiens)
Ensembl gene IDs: ENSG00000132204Ensembl transcript IDs: ENST00000412816.7, ENST00000577403.6, ENST00000577867.5, ENST00000578835.5, ENST00000580336.1, ENST00000581212.1, ENST00000581430.5, ENST00000582570.1, ENST00000582862.6, ENST00000584090.5, ENST00000584492.5, ENST00000653213.1, ENST00000653775.1, ENST00000654559.1, ENST00000655957.1, ENST00000657121.1, ENST00000657423.1, ENST00000657618.1, ENST00000657919.1, ENST00000658090.1, ENST00000659094.1, ENST00000659289.1, ENST00000660358.1, ENST00000660475.1, ENST00000660947.1, ENST00000660964.1, ENST00000661233.1, ENST00000661646.1, ENST00000661852.1, ENST00000661931.1, ENST00000663392.1, ENST00000663512.1, ENST00000665133.1, ENST00000666542.1, ENST00000667225.1, ENST00000667416.1, ENST00000667776.1, ENST00000669153.1, ENST00000669242.1, ENST00000669312.1, ENST00000671558.1, ENST00000671645.1
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CATTTGTCATATTTTGAAGTTGCATGGGGCTGGAGTCCGGAGCTCTaGCCACTCGACCCAGGGCTCCCTCCACCACCATATCTCAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: HLSYFEVAWGWSPEL*PLDPGLPPPPYLRF Trigger: GAACCTGAGATATGGTGGTGGAGGGAGCCCTGGGTCGAGTGGTCAGAGCTCCGGACTCCAGCCCCATGCAACTTCAAAATATGACAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000584090.5 ENST00000657423.1 |
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| CDS GCA 90 bp | CAACCCAATGAAGTGCTTTTGCTGGCACCCCCATCAGGGTGTTGTTaGAGGCACACTGGAAATACCTTGGCTCCTCCAGTGCAGCAAGTG | + |
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Preference number: 5 (lower is better) Translates to: QPNEVLLLAPPSGCC*RHTGNTLAPPVQQV Trigger: CACTTGCTGCACTGGAGGAGCCAAGGTATTTCCAGTGTGCCTGCAACAACACCCTGATGGGGGTGCCAGCAAAAGCACTTCATTGGGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663392.1 |
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| CDS GCA 90 bp | TTTGATGGCATGTGTGCACACGTGGACCTCACCAACCCAATGAAGTaGTTTTGCTGGCACCCCCATCAGGGTGTTGTTGCAGGCACACTG | + |
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Preference number: 5 (lower is better) Translates to: FDGMCAHVDLTNPMK*FCWHPHQGVVAGTL Trigger: CAGTGTGCCTGCAACAACACCCTGATGGGGGTGCCAGCAAAAGCACTTCATTGGGTTGGTGAGGTCCACGTGTGCACACATGCCATCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663392.1 |
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| CDS CCA 90 bp | CAGCTGGTTGGTTGTCTGGTAAGGGTCTGCTCTCTGCTTCTAGGATaGCACCTTGCTGCTGTGTCCTCTGATGGTAAACTAGGTGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: QLVGCLVRVCSLLLG*HLAAVSSDGKLGVG Trigger: GCCCACACCTAGTTTACCATCAGAGGACACAGCAGCAAGGTGCCATCCTAGAAGCAGAGAGCAGACCCTTACCAGACAACCAACCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580336.1 |
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| CDS TCA 90 bp | CATTTGTCATATTTTGAAGTTGCATGGGGCTGGAGTCCGGAGCTCTaGCCTAAGGGTGAATCTTACCACTCGACCCAGGGCTCCCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: HLSYFEVAWGWSPEL*PKGESYHSTQGSLH Trigger: GTGGAGGGAGCCCTGGGTCGAGTGGTAAGATTCACCCTTAGGTCAGAGCTCCGGACTCCAGCCCCATGCAACTTCAAAATATGACAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000653775.1 ENST00000657618.1 ENST00000660475.1 ENST00000660947.1 ENST00000669242.1 |
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| CDS TCA 90 bp | CTCCTTCGATGGCACACACTTGCCCATAGCCTTTTCCCACCACTTTaGTGGCATGTGTGCACACGTGGACCTCACCAACCCAATGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: LLRWHTLAHSLFPPL*WHVCTRGPHQPNEV Trigger: CACTTCATTGGGTTGGTGAGGTCCACGTGTGCACACATGCCATCAAAGTGGTGGGAAAAGGCTATGGGCAAGTGTGTGCCATCGAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663392.1 |
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| CDS CCA 90 bp | ATGTGTGCACACGTGGACCTCACCAACCCAATGAAGTGCTTTTGCTaGCACCCCCATCAGGGTGTTGTTGCAGGCACACTGGAAATACCT | + |
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Preference number: 5 (lower is better) Translates to: MCAHVDLTNPMKCFC*HPHQGVVAGTLEIP Trigger: AGGTATTTCCAGTGTGCCTGCAACAACACCCTGATGGGGGTGCCAGCAAAAGCACTTCATTGGGTTGGTGAGGTCCACGTGTGCACACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663392.1 |
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| CDS CCA 90 bp | GCGGCTTCTCTTACTGCTGGCAACTTCGCTCAATTGTGTGCCCAGTaGGTGTCTCCACTTCTCCAGGTTCTGGTGAATTCAGGATGGTAT | + |
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Preference number: 5 (lower is better) Translates to: AASLTAGNFAQLCAQ*VSPLLQVLVNSGWY Trigger: ATACCATCCTGAATTCACCAGAACCTGGAGAAGTGGAGACACCCACTGGGCACACAATTGAGCGAAGTTGCCAGCAGTAAGAGAAGCCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658090.1 |
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| CDS CCA 90 bp | CAGCTGGTTGGTTGTCTGGTAAGGGTCTGCTCTCTGCTTCTAGGATaGCACCTTGCTGCTGTGTCCTCTGATGGTAAACGTTCATGGATT | + |
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Preference number: 5 (lower is better) Translates to: QLVGCLVRVCSLLLG*HLAAVSSDGKRSWI Trigger: AATCCATGAACGTTTACCATCAGAGGACACAGCAGCAAGGTGCCATCCTAGAAGCAGAGAGCAGACCCTTACCAGACAACCAACCAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582570.1 |
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| CDS GCA 90 bp | CACCTCAAGATTGTTGTTCCATTTTCCTCATGCTGCGTGTTTAAGTaGAGTTCTGGAGGCCGAGAAGTCCAAGATCATGGCACCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: HLKIVVPFSSCCVFK*SSGGREVQDHGTSW Trigger: CCAGCTGGTGCCATGATCTTGGACTTCTCGGCCTCCAGAACTGCACTTAAACACGCAGCATGAGGAAAATGGAACAACAATCTTGAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000653775.1 ENST00000657618.1 ENST00000658090.1 ENST00000659094.1 ENST00000659289.1 ENST00000660475.1 ENST00000660964.1 ENST00000661646.1 ENST00000661852.1 ENST00000667416.1 ENST00000669242.1 ENST00000669312.1 ENST00000671558.1 |
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| CDS TCA 90 bp | GGGAACTTCTGTGATCTTCCTGAGGTCACTTCAAAGTGCCTTCAGTaGGGGAGAATGTGCTTAGGCAGAGCAACTCTCTCTCCTTACTCA | + |
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Preference number: 5 (lower is better) Translates to: GNFCDLPEVTSKCLQ*GRMCLGRATLSPYS Trigger: TGAGTAAGGAGAGAGAGTTGCTCTGCCTAAGCACATTCTCCCTCACTGAAGGCACTTTGAAGTGACCTCAGGAAGATCACAGAAGTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658090.1 |
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| CDS GCA 90 bp | TTGCTCAAGATTGTTGTTCCATTTTCCTCATGCTGCGTGTTTAAGTaGAGTTCTGGAGGCCGAGAAGTCCAAGATCATGGCACCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LLKIVVPFSSCCVFK*SSGGREVQDHGTSW Trigger: CCAGCTGGTGCCATGATCTTGGACTTCTCGGCCTCCAGAACTGCACTTAAACACGCAGCATGAGGAAAATGGAACAACAATCTTGAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000577403.6 ENST00000667776.1 ENST00000669153.1 |
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| CDS CCA 90 bp | GAAATTTATTTCTCACAGTTCTGGAGGCCGAGAAGTCCAAGATCATaGCACCAGCTGGTTGGTTGTCTGGTAAGGGTCTGCTCTCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: EIYFSQFWRPRSPRS*HQLVGCLVRVCSLL Trigger: AAGCAGAGAGCAGACCCTTACCAGACAACCAACCAGCTGGTGCCATGATCTTGGACTTCTCGGCCTCCAGAACTGTGAGAAATAAATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000580336.1 ENST00000582570.1 |
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| CDS GCA 90 bp | GAGGGTGTGGTGTTGCTCAAGATTGTTGTTCCATTTTCCTCATGCTaGGTGTTTAAGTGCAGTTCTGGAGGCCGAGAAGTCCAAGATCAT | + |
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Preference number: 5 (lower is better) Translates to: EGVVLLKIVVPFSSC*VFKCSSGGREVQDH Trigger: ATGATCTTGGACTTCTCGGCCTCCAGAACTGCACTTAAACACGCAGCATGAGGAAAATGGAACAACAATCTTGAGCAACACCACACCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000577403.6 ENST00000667776.1 ENST00000669153.1 |
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| CDS GCA 90 bp | GCAGGCCTACATTCCATTTGGAGAATCAAGAGGAGAGCATTCCTTTaGCTTTTCCAGCTTTTAAAGGTTGCCTGCACTCCATGGCTCATG | + |
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Preference number: 5 (lower is better) Translates to: AGLHSIWRIKRRAFL*LFQLLKVACTPWLM Trigger: CATGAGCCATGGAGTGCAGGCAACCTTTAAAAGCTGGAAAAGGCAAAGGAATGCTCTCCTCTTGATTCTCCAAATGGAATGTAGGCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671645.1 |
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| CDS GCA 90 bp | CTAGATTTGTTTCTGCAACTCAGCGATGGCAATATTTCTGCCTGTTaGTCAGCGTGTAGGACTTTTCCTCAGGCTTGTTGCTTTGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: LDLFLQLSDGNISAC*SACRTFPQACCFVV Trigger: GACCACAAAGCAACAAGCCTGAGGAAAAGTCCTACACGCTGAGCAACAGGCAGAAATATTGCCATCGCTGAGTTGCAGAAACAAATCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412816.7 |
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| CDS GCA 90 bp | AAGAGGAGAGCATTCCTTTGCCTTTTCCAGCTTTTAAAGGTTGCCTaGACTCCATGGCTCATGACCTCATCTTCCATCTTCAAAGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: KRRAFLCLFQLLKVA*TPWLMTSSSIFKAR Trigger: TCTGGCTTTGAAGATGGAAGATGAGGTCATGAGCCATGGAGTGCAGGCAACCTTTAAAAGCTGGAAAAGGCAAAGGAATGCTCTCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671645.1 |
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| CDS CCA 90 bp | AGAGTAGGGGTGTCTTACCATAAAGCTATGGTGATCAGGAGGGTGTaGTGTTGCTCAAGATTGTTGTTCCATTTTCCTCATGCTGCGTGT | + |
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Preference number: 5 (lower is better) Translates to: RVGVSYHKAMVIRRV*CCSRLLFHFPHAAC Trigger: ACACGCAGCATGAGGAAAATGGAACAACAATCTTGAGCAACACCACACCCTCCTGATCACCATAGCTTTATGGTAAGACACCCCTACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577403.6 |
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| CDS GCA 90 bp | GGGGTGTCTTACCATAAAGCTATGGTGATCAGGAGGGTGTGGTGTTaGTCAAGATTGTTGTTCCATTTTCCTCATGCTGCGTGTTTAAGT | + |
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Preference number: 5 (lower is better) Translates to: GVSYHKAMVIRRVWC*SRLLFHFPHAACLS Trigger: ACTTAAACACGCAGCATGAGGAAAATGGAACAACAATCTTGAGCAACACCACACCCTCCTGATCACCATAGCTTTATGGTAAGACACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577403.6 |
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| CDS GCA 90 bp | AATCAAGAGGAGAGCATTCCTTTGCCTTTTCCAGCTTTTAAAGGTTaGCTGCACTCCATGGCTCATGACCTCATCTTCCATCTTCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: NQEESIPLPFPAFKG*LHSMAHDLIFHLQS Trigger: GCTTTGAAGATGGAAGATGAGGTCATGAGCCATGGAGTGCAGGCAACCTTTAAAAGCTGGAAAAGGCAAAGGAATGCTCTCCTCTTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671645.1 |
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| CDS CCA 90 bp | AGAACATTTGCTGAGTTTAGAACCAGTGTCGGAGGCCCAGGAGTTTaGAAGAAAGCTTCTAAATGTCGCAGTAAATCTCCCACAGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: RTFAEFRTSVGGPGV*KKASKCRSKSPTVS Trigger: TGAGACTGTGGGAGATTTACTGCGACATTTAGAAGCTTTCTTCCAAACTCCTGGGCCTCCGACACTGGTTCTAAACTCAGCAAATGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000584090.5 ENST00000653775.1 ENST00000657423.1 ENST00000657618.1 ENST00000660475.1 ENST00000660947.1 ENST00000661931.1 ENST00000669242.1 |
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| CDS TCA 90 bp | GCGTCATTAGTGGTTAGGTTAGCTAATAAATTTGTTTCTTGTTGTTaGGTTCTGGAGGCCGAGAAGTCCAAGATCATGGCACCAGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: ASLVVRLANKFVSCC*VLEAEKSKIMAPAG Trigger: ACCAGCTGGTGCCATGATCTTGGACTTCTCGGCCTCCAGAACTCAACAACAAGAAACAAATTTATTAGCTAACCTAACCACTAATGACGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412816.7 |
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| CDS TCA 90 bp | CATCCCTCATCCCTAGAGGTAGCAGCTGCTCCTACTTTGCTGTTTTaGAAGTCCTTAGAATTGTCTCTTGCGTCATTAGTGGTTAGGTTA | + |
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Preference number: 5 (lower is better) Translates to: HPSSLEVAAAPTLLF*KSLELSLASLVVRL Trigger: TAACCTAACCACTAATGACGCAAGAGACAATTCTAAGGACTTTCAAAACAGCAAAGTAGGAGCAGCTGCTACCTCTAGGGATGAGGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 18 transcripts: ENST00000412816.7 ENST00000577403.6 ENST00000578835.5 ENST00000584090.5 ENST00000654559.1 ENST00000655957.1 ENST00000657423.1 ENST00000657618.1 ENST00000659094.1 ENST00000660358.1 ENST00000660947.1 ENST00000660964.1 ENST00000661931.1 ENST00000666542.1 ENST00000669153.1 ENST00000669242.1 ENST00000669312.1 ENST00000671558.1 |
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| CDS TCA 90 bp | TCTCCCTCATCCCTAGAGGTAGCAGCTGCTCCTACTTTGCTGTTTTaGAAGTCCTTAGAATTGTCTCTTGCGTCATTAGTGGTTAGGTTA | + |
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Preference number: 5 (lower is better) Translates to: SPSSLEVAAAPTLLF*KSLELSLASLVVRL Trigger: TAACCTAACCACTAATGACGCAAGAGACAATTCTAAGGACTTTCAAAACAGCAAAGTAGGAGCAGCTGCTACCTCTAGGGATGAGGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 18 transcripts: ENST00000581212.1 ENST00000582862.6 ENST00000584492.5 ENST00000653213.1 ENST00000653775.1 ENST00000657121.1 ENST00000657919.1 ENST00000659289.1 ENST00000660475.1 ENST00000661233.1 ENST00000661646.1 ENST00000661852.1 ENST00000663392.1 ENST00000663512.1 ENST00000665133.1 ENST00000667416.1 ENST00000667776.1 ENST00000671645.1 |
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| CDS CCA 90 bp | CTAATAAATTTGTTTCTTGTTGTTGCATGCTCCTCCAGATGGCTTTaGCTTCTGTTGACAGTTGGGTCTGGACAGAGTAGGGGTGTCTTA | + |
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Preference number: 5 (lower is better) Translates to: LINLFLVVACSSRWL*LLLTVGSGQSRGVL Trigger: TAAGACACCCCTACTCTGTCCAGACCCAACTGTCAACAGAAGCCAAAGCCATCTGGAGGAGCATGCAACAACAAGAAACAAATTTATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000577403.6 ENST00000582862.6 ENST00000584090.5 ENST00000653213.1 ENST00000657423.1 ENST00000659094.1 ENST00000661646.1 ENST00000663392.1 ENST00000665133.1 ENST00000667416.1 ENST00000669312.1 |
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| CDS GCA 90 bp | ACCAATAATTGGACAATTGCATCCCTCATCCCTAGAGGTAGCAGCTaGTCCTACTTTGCTGTTTTGAAAGTCCTTAGAATTGTCTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: TNNWTIASLIPRGSS*SYFAVLKVLRIVSC Trigger: GCAAGAGACAATTCTAAGGACTTTCAAAACAGCAAAGTAGGAGCAGCTGCTACCTCTAGGGATGAGGGATGCAATTGTCCAATTATTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 18 transcripts: ENST00000412816.7 ENST00000577403.6 ENST00000578835.5 ENST00000584090.5 ENST00000654559.1 ENST00000655957.1 ENST00000657423.1 ENST00000657618.1 ENST00000659094.1 ENST00000660358.1 ENST00000660947.1 ENST00000660964.1 ENST00000661931.1 ENST00000666542.1 ENST00000669153.1 ENST00000669242.1 ENST00000669312.1 ENST00000671558.1 |
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| CDS GCA 90 bp | AGAGGAAATACAAATGTGTTGGCGAGAGGGCCTTCCTCATCTGCATaGCAATCTCCCCTTCAAGACATTTGTCATATTTTGAAGTTGCAT | + |
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Preference number: 5 (lower is better) Translates to: RGNTNVLARGPSSSA*QSPLQDICHILKLH Trigger: ATGCAACTTCAAAATATGACAAATGTCTTGAAGGGGAGATTGGCATGCAGATGAGGAAGGCCCTCTCGCCAACACATTTGTATTTCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000584090.5 ENST00000653775.1 ENST00000657423.1 ENST00000657618.1 ENST00000660475.1 ENST00000660947.1 ENST00000661931.1 ENST00000669242.1 |
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| CDS GCA 90 bp | GTACAGAGGAAATACAAATGTGTTGGCGAGAGGGCCTTCCTCATCTaGATGCCAATCTCCCCTTCAAGACATTTGTCATATTTTGAAGTT | + |
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Preference number: 5 (lower is better) Translates to: VQRKYKCVGERAFLI*MPISPSRHLSYFEV Trigger: AACTTCAAAATATGACAAATGTCTTGAAGGGGAGATTGGCATGCAGATGAGGAAGGCCCTCTCGCCAACACATTTGTATTTCCTCTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000584090.5 ENST00000653775.1 ENST00000657423.1 ENST00000657618.1 ENST00000660475.1 ENST00000660947.1 ENST00000661931.1 ENST00000669242.1 |
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| CDS CCA 90 bp | AAATTTGCAACCTCTGGCATAAACGGGTTAAGGCCTTCGACTGACTaGATAAGGCCACCCATATTATGGAGAGTAATCTGCTTTACTCAA | + |
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Preference number: 5 (lower is better) Translates to: KFATSGINGLRPSTD*IRPPILWRVICFTQ Trigger: TTGAGTAAAGCAGATTACTCTCCATAATATGGGTGGCCTTATCCAGTCAGTCGAAGGCCTTAACCCGTTTATGCCAGAGGTTGCAAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657919.1 ENST00000660358.1 |
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| CDS GCA 90 bp | TTGTATGCATTTTTGAGTTTCTCCCTCATCCCTAGAGGTAGCAGCTaGTCCTACTTTGCTGTTTTGAAAGTCCTTAGAATTGTCTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: LYAFLSFSLIPRGSS*SYFAVLKVLRIVSC Trigger: GCAAGAGACAATTCTAAGGACTTTCAAAACAGCAAAGTAGGAGCAGCTGCTACCTCTAGGGATGAGGGAGAAACTCAAAAATGCATACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 18 transcripts: ENST00000581212.1 ENST00000582862.6 ENST00000584492.5 ENST00000653213.1 ENST00000653775.1 ENST00000657121.1 ENST00000657919.1 ENST00000659289.1 ENST00000660475.1 ENST00000661233.1 ENST00000661646.1 ENST00000661852.1 ENST00000663392.1 ENST00000663512.1 ENST00000665133.1 ENST00000667416.1 ENST00000667776.1 ENST00000671645.1 |
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| CDS GCA 90 bp | TTCTCTCTTCTTCAGGGGAGATCAGTCCTTTCTTTAAGGCATTTATaGCTAGTGCTCCACTATTGGAACGCTAAGCTTGTGGGATTTATT | + |
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Preference number: 5 (lower is better) Translates to: FSLLQGRSVLSLRHL*LVLHYWNAKLVGFI Trigger: AATAAATCCCACAAGCTTAGCGTTCCAATAGTGGAGCACTAGGCATAAATGCCTTAAAGAAAGGACTGATCTCCCCTGAAGAAGAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657919.1 ENST00000660358.1 |
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| CDS GCA 90 bp | TTCTTGTTGTTGCATAAAGCTATGGTGATCAGGAGGGTGTGGTGTTaGTCAAGATTGTTGTTCCATTTTCCTCATGCTGCGTGTTTAAGT | + |
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Preference number: 5 (lower is better) Translates to: FLLLHKAMVIRRVWC*SRLLFHFPHAACLS Trigger: ACTTAAACACGCAGCATGAGGAAAATGGAACAACAATCTTGAGCAACACCACACCCTCCTGATCACCATAGCTTTATGCAACAACAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667776.1 ENST00000669153.1 |
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| CDS CCA 90 bp | ATTTGTTTCTTGTTGTTGCATAAAGCTATGGTGATCAGGAGGGTGTaGTGTTGCTCAAGATTGTTGTTCCATTTTCCTCATGCTGCGTGT | + |
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Preference number: 5 (lower is better) Translates to: ICFLLLHKAMVIRRV*CCSRLLFHFPHAAC Trigger: ACACGCAGCATGAGGAAAATGGAACAACAATCTTGAGCAACACCACACCCTCCTGATCACCATAGCTTTATGCAACAACAAGAAACAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667776.1 ENST00000669153.1 |
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| CDS TCA 90 bp | AACTCTCTCTCCTTACTCATTCTCAGCTGTATTTCTAAGACTCGGTaGTTTTCACCTACAACACAACATAAAGCTATGGTGATCAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: NSLSLLILSCISKTR*FSPTTQHKAMVIRR Trigger: CCTCCTGATCACCATAGCTTTATGTTGTGTTGTAGGTGAAAATCACCGAGTCTTAGAAATACAGCTGAGAATGAGTAAGGAGAGAGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658090.1 |
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| CDS TCA 90 bp | CAAAACCAAGAAGCCGATCACATGAGACCACCACTAAATGATGTTTaGAAGGATGTACTTCAGAACAAAGGAAAATTCTCTCCCACTCAG | + |
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Preference number: 5 (lower is better) Translates to: QNQEADHMRPPLNDV*KDVLQNKGKFSPTQ Trigger: CTGAGTGGGAGAGAATTTTCCTTTGTTCTGAAGTACATCCTTTCAAACATCATTTAGTGGTGGTCTCATGTGATCGGCTTCTTGGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657919.1 ENST00000660358.1 |
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| CDS CCA 90 bp | CTAGGATGGCACCTTGCTGCTGTGTCCTCTGATGGTAAACGTTCATaGATTGAAAGACACTATATTGTGAATACATTGTGTCAGTTAGAA | + |
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Preference number: 5 (lower is better) Translates to: LGWHLAAVSSDGKRS*IERHYIVNTLCQLE Trigger: TTCTAACTGACACAATGTATTCACAATATAGTGTCTTTCAATCCATGAACGTTTACCATCAGAGGACACAGCAGCAAGGTGCCATCCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582570.1 |
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| CDS TCA 90 bp | AAGCAGACAACCATGAAGTGGAAATTCGAGTCCATATCAAAAGAATaGCAGCATTTTCTTGTCTCGCTCTTGCATTTACACAGAGATCCT | + |
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Preference number: 5 (lower is better) Translates to: KQTTMKWKFESISKE*QHFLVSLLHLHRDP Trigger: AGGATCTCTGTGTAAATGCAAGAGCGAGACAAGAAAATGCTGTCATTCTTTTGATATGGACTCGAATTTCCACTTCATGGTTGTCTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412816.7 |
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| CDS TCA 90 bp | CCTTACTGGTTCCAGGATTCCATTTCCCTTCTCTTGTTCTGTTGTTaGAGCATTTTGGCAGGATATTGTCTTGGACAAAATTCTCAAATG | + |
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Preference number: 5 (lower is better) Translates to: PYWFQDSISLLLFCC*SILAGYCLGQNSQM Trigger: CATTTGAGAATTTTGTCCAAGACAATATCCTGCCAAAATGCTTCAACAACAGAACAAGAGAAGGGAAATGGAATCCTGGAACCAGTAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667225.1 |
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| CDS CCA 90 bp | TCTGTGGCTTGTCTTTATAAGGTTTGGCTTGATTTGCCTTTTAAGTaGAGTCCTTTGTATTCTTCCAAGGTGGAGGTAAATGTCTATCAG | + |
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Preference number: 5 (lower is better) Translates to: SVACLYKVWLDLPFK*SPLYSSKVEVNVYQ Trigger: CTGATAGACATTTACCTCCACCTTGGAAGAATACAAAGGACTCCACTTAAAAGGCAAATCAAGCCAAACCTTATAAAGACAAGCCACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667225.1 |
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| CDS GCA 90 bp | GCGTCATTAGTGGTTAGGTTAGCTAATAAATTTGTTTCTTGTTGTTaGTGTAAGAAACATAAAGCTATGGTGATCAGGAGGGTGTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASLVVRLANKFVSCC*CKKHKAMVIRRVWC Trigger: ACACCACACCCTCCTGATCACCATAGCTTTATGTTTCTTACAGCAACAACAAGAAACAAATTTATTAGCTAACCTAACCACTAATGACGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000584492.5 ENST00000657919.1 ENST00000660947.1 |
||
| CDS CCA 90 bp | TTTATTCTGAACTCCTATGAGTTTCAAACGAAGGAGGTTAGAAGTTaGAATTCTCTCTTTCTCTCTCTCTCTCTCCTTGAATATTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FILNSYEFQTKEVRS*NSLFLSLSLLEYSH Trigger: GTGGGAATATTCAAGGAGAGAGAGAGAGAGAAAGAGAGAATTCCAACTTCTAACCTCCTTCGTTTGAAACTCATAGGAGTTCAGAATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657121.1 ENST00000659289.1 ENST00000661646.1 ENST00000671558.1 |
||
| CDS CCA 90 bp | CTCAAAACATGTAACCTGAAGTCTGTGGCTTGTCTTTATAAGGTTTaGCTTGATTTGCCTTTTAAGTGGAGTCCTTTGTATTCTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LKTCNLKSVACLYKV*LDLPFKWSPLYSSK Trigger: CTTGGAAGAATACAAAGGACTCCACTTAAAAGGCAAATCAAGCCAAACCTTATAAAGACAAGCCACAGACTTCAGGTTACATGTTTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655957.1 ENST00000667225.1 |
||
| CDS TCA 90 bp | AAGCACCCATTCAAATATTTTGTGCAGAACTCAAAACATGTAACCTaGAGTCTGTGGCTTGTCTTTATAAGGTTTGGCTTGATTTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KHPFKYFVQNSKHVT*SLWLVFIRFGLICL Trigger: AAGGCAAATCAAGCCAAACCTTATAAAGACAAGCCACAGACTTCAGGTTACATGTTTTGAGTTCTGCACAAAATATTTGAATGGGTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655957.1 ENST00000667225.1 |
||
| CDS TCA 90 bp | ATTTTTCTCATTTGTAATTATCAAGTAATGTGTGATGAGATACTTTaGCACTACGCACATCTCCTGACGCTATGTACAAATCCAGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: IFLICNYQVMCDEIL*HYAHLLTLCTNPVT Trigger: AGTGACTGGATTTGTACATAGCGTCAGGAGATGTGCGTAGTGTCAAAGTATCTCATCACACATTACTTGATAATTACAAATGAGAAAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 18 transcripts: ENST00000581212.1 ENST00000582862.6 ENST00000584492.5 ENST00000653213.1 ENST00000653775.1 ENST00000657121.1 ENST00000657919.1 ENST00000659289.1 ENST00000660475.1 ENST00000661233.1 ENST00000661646.1 ENST00000661852.1 ENST00000663392.1 ENST00000663512.1 ENST00000665133.1 ENST00000667416.1 ENST00000667776.1 ENST00000671645.1 |
||
| CDS TCA 90 bp | AATCAATGTCTGACAATACAATGGCTAAGAACATCCCAGGACTGTTaGAAGACACTAATTCACAAATTCAAGCCCAGTAAATCTCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: NQCLTIQWLRTSQDC*KTLIHKFKPSKSQI Trigger: TATTTGAGATTTACTGGGCTTGAATTTGTGAATTAGTGTCTTTCAACAGTCCTGGGATGTTCTTAGCCATTGTATTGTCAGACATTGATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000582862.6 ENST00000657919.1 ENST00000660358.1 |
||
| CDS CCA 72 bp | CCCTGTCTGCCCACCTTTCCTGGGGTCCCTTCCTGGTaGCACCTGCTCATAGTGCAGCCTCAAATGCCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: PCLPTFPGVPSW*HLLIVQPQMPN Trigger: ATTGGGCATTTGAGGCTGCACTATGAGCAGGTGCCACCAGGAAGGGACCCCAGGAAAGGTGGGCAGACAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663392.1 |
||
| CDS GCA 72 bp | GTGGCACCTGCTCATAGTGCAGCCTCAAATGCCCAATaGGGGTGCTTCCCGGTGGCCACTACCATACCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VAPAHSAASNAQ*GCFPVATTIPL Trigger: AAGAGGTATGGTAGTGGCCACCGGGAAGCACCCGCATTGGGCATTTGAGGCTGCACTATGAGCAGGTGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663392.1 |
||
| CDS TCA 72 bp | TATTTTGAAGTTGCATGGGGCTGGAGTCCGGAGCTCTaGCCACTCGACCCAGGGCTCCCTCCACCACCATAT | + |
|
Preference number: 6 (lower is better) Translates to: YFEVAWGWSPEL*PLDPGLPPPPY Trigger: ATATGGTGGTGGAGGGAGCCCTGGGTCGAGTGGTCAGAGCTCCGGACTCCAGCCCCATGCAACTTCAAAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000584090.5 ENST00000657423.1 |
||
| CDS TCA 72 bp | ATGGCATGTGTGCACACGTGGACCTCACCAACCCAATaGAGTGCTTTTGCTGGCACCCCCATCAGGGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: MACVHTWTSPTQ*SAFAGTPIRVL Trigger: CAACACCCTGATGGGGGTGCCAGCAAAAGCACTTCATTGGGTTGGTGAGGTCCACGTGTGCACACATGCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663392.1 |
||
| CDS TCA 72 bp | TGGCACACACTTGCCCATAGCCTTTTCCCACCACTTTaGTGGCATGTGTGCACACGTGGACCTCACCAACCC | + |
|
Preference number: 6 (lower is better) Translates to: WHTLAHSLFPPL*WHVCTRGPHQP Trigger: GGGTTGGTGAGGTCCACGTGTGCACACATGCCATCAAAGTGGTGGGAAAAGGCTATGGGCAAGTGTGTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663392.1 |
||
| CDS GCA 72 bp | TGGGAGTGTAGTTCTGACGGCTTGAGGGAGGTGTGGTaGAGTCTCAAATGGCGGCTTCTCTTACTGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WECSSDGLREVW*SLKWRLLLLLA Trigger: TGCCAGCAGTAAGAGAAGCCGCCATTTGAGACTGCACCACACCTCCCTCAAGCCGTCAGAACTACACTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658090.1 |
||
| CDS CCA 72 bp | GAGGCCGAGAAGTCCAAGATCATGGCACCAGCTGGTTaGTTGTCTGGTAAGGGTCTGCTCTCTGCTTCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: EAEKSKIMAPAG*LSGKGLLSASR Trigger: CCTAGAAGCAGAGAGCAGACCCTTACCAGACAACCAACCAGCTGGTGCCATGATCTTGGACTTCTCGGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 30 transcripts: ENST00000412816.7 ENST00000577403.6 ENST00000580336.1 ENST00000581430.5 ENST00000582570.1 ENST00000653213.1 ENST00000653775.1 ENST00000654559.1 ENST00000655957.1 ENST00000657121.1 ENST00000657423.1 ENST00000657618.1 ENST00000658090.1 ENST00000659094.1 ENST00000659289.1 ENST00000660475.1 ENST00000660964.1 ENST00000661233.1 ENST00000661646.1 ENST00000661852.1 ENST00000661931.1 ENST00000665133.1 ENST00000666542.1 ENST00000667225.1 ENST00000667416.1 ENST00000667776.1 ENST00000669153.1 ENST00000669242.1 ENST00000669312.1 ENST00000671558.1 |
||
| CDS CCA 72 bp | GTTGGGTCTGGACAGAGTAGGGGTGTCTTACAGTTCTaGAGGCCGAGAAGTCCAAGATCATGGCACCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VGSGQSRGVLQF*RPRSPRSWHQL Trigger: CAGCTGGTGCCATGATCTTGGACTTCTCGGCCTCCAGAACTGTAAGACACCCCTACTCTGTCCAGACCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653213.1 |
||
| CDS TCA 72 bp | TATTTTGAAGTTGCATGGGGCTGGAGTCCGGAGCTCTaGCCTAAGGGTGAATCTTACCACTCGACCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: YFEVAWGWSPEL*PKGESYHSTQG Trigger: GCCCTGGGTCGAGTGGTAAGATTCACCCTTAGGTCAGAGCTCCGGACTCCAGCCCCATGCAACTTCAAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000653775.1 ENST00000657618.1 ENST00000660475.1 ENST00000660947.1 ENST00000669242.1 |
||
| CDS GCA 72 bp | ATGTGTGCACACGTGGACCTCACCAACCCAATGAAGTaGTTTTGCTGGCACCCCCATCAGGGTGTTGTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: MCAHVDLTNPMK*FCWHPHQGVVA Trigger: TGCAACAACACCCTGATGGGGGTGCCAGCAAAAGCACTTCATTGGGTTGGTGAGGTCCACGTGTGCACACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663392.1 |
||
| CDS CCA 72 bp | TCTCTGCCAGTAGTGAAAGAGGGGAGTGAGGAAGGCTaGGGAATGGCTTTTGGGTCAGAACCAGCATGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLPVVKEGSEEG*GMAFGSEPAWL Trigger: AAGCCATGCTGGTTCTGACCCAAAAGCCATTCCCCAGCCTTCCTCACTCCCCTCTTTCACTACTGGCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412816.7 |
||
| CDS CCA 72 bp | TTCTCACAGTTCTGGAGGCCGAGAAGTCCAAGATCATaGCACCAGCTGGTTGGTTGTCTGGTAAGGGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FSQFWRPRSPRS*HQLVGCLVRVC Trigger: GCAGACCCTTACCAGACAACCAACCAGCTGGTGCCATGATCTTGGACTTCTCGGCCTCCAGAACTGTGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000580336.1 ENST00000582570.1 |
||
| CDS CCA 72 bp | GTCTTACAGTTCTGGAGGCCGAGAAGTCCAAGATCATaGCACCAGCTGGTTGGTTGTCTGGTAAGGGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VLQFWRPRSPRS*HQLVGCLVRVC Trigger: GCAGACCCTTACCAGACAACCAACCAGCTGGTGCCATGATCTTGGACTTCTCGGCCTCCAGAACTGTAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653213.1 |
||
| CDS CAA 72 bp | GCCGAGAAGTCCAAGATCATGGCACCAGCTGGTTGGTaGTCTGGTAAGGGTCTGCTCTCTGCTTCTAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: AEKSKIMAPAGW*SGKGLLSASRM Trigger: CATCCTAGAAGCAGAGAGCAGACCCTTACCAGACAACCAACCAGCTGGTGCCATGATCTTGGACTTCTCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 30 transcripts: ENST00000412816.7 ENST00000577403.6 ENST00000580336.1 ENST00000581430.5 ENST00000582570.1 ENST00000653213.1 ENST00000653775.1 ENST00000654559.1 ENST00000655957.1 ENST00000657121.1 ENST00000657423.1 ENST00000657618.1 ENST00000658090.1 ENST00000659094.1 ENST00000659289.1 ENST00000660475.1 ENST00000660964.1 ENST00000661233.1 ENST00000661646.1 ENST00000661852.1 ENST00000661931.1 ENST00000665133.1 ENST00000666542.1 ENST00000667225.1 ENST00000667416.1 ENST00000667776.1 ENST00000669153.1 ENST00000669242.1 ENST00000669312.1 ENST00000671558.1 |
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| CDS CAA 72 bp | ATGGCGGCTTCTCTTACTGCTGGCAACTTCGCTCAATaGTGTGCCCAGTGGGTGTCTCCACTTCTCCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: MAASLTAGNFAQ*CAQWVSPLLQV Trigger: AACCTGGAGAAGTGGAGACACCCACTGGGCACACAATTGAGCGAAGTTGCCAGCAGTAAGAGAAGCCGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658090.1 |
||
| CDS CCA 72 bp | GGTTGTCTGGTAAGGGTCTGCTCTCTGCTTCTAGGATaGCACCTTGCTGCTGTGTCCTCTGATGGTAAACGT | + |
|
Preference number: 6 (lower is better) Translates to: GCLVRVCSLLLG*HLAAVSSDGKR Trigger: ACGTTTACCATCAGAGGACACAGCAGCAAGGTGCCATCCTAGAAGCAGAGAGCAGACCCTTACCAGACAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582570.1 |
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| CDS CAA 72 bp | ATTCACAGTCTCCCCCACTCCTTCGATGGCACACACTaGCCCATAGCCTTTTCCCACCACTTTGATGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: IHSLPHSFDGTH*PIAFSHHFDGM Trigger: CATGCCATCAAAGTGGTGGGAAAAGGCTATGGGCAAGTGTGTGCCATCGAAGGAGTGGGGGAGACTGTGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663392.1 |
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| CDS CAA 90 bp | TGTACACACATTCACAGTCTCCCCCACTCCTTCGATGGCACACACTaGCCCATAGCCTTTTCCCACCACTTTGATGGCATGTGTGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: CTHIHSLPHSFDGTH*PIAFSHHFDGMCAH Trigger: GTGTGCACACATGCCATCAAAGTGGTGGGAAAAGGCTATGGGCAAGTGTGTGCCATCGAAGGAGTGGGGGAGACTGTGAATGTGTGTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663392.1 |
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| CDS CCA 72 bp | GGTTGTCTGGTAAGGGTCTGCTCTCTGCTTCTAGGATaGCACCTTGCTGCTGTGTCCTCTGATGGTAAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: GCLVRVCSLLLG*HLAAVSSDGKR Trigger: TCTTTTACCATCAGAGGACACAGCAGCAAGGTGCCATCCTAGAAGCAGAGAGCAGACCCTTACCAGACAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 28 transcripts: ENST00000412816.7 ENST00000577403.6 ENST00000581430.5 ENST00000653213.1 ENST00000653775.1 ENST00000654559.1 ENST00000655957.1 ENST00000657121.1 ENST00000657423.1 ENST00000657618.1 ENST00000658090.1 ENST00000659094.1 ENST00000659289.1 ENST00000660475.1 ENST00000660964.1 ENST00000661233.1 ENST00000661646.1 ENST00000661852.1 ENST00000661931.1 ENST00000665133.1 ENST00000666542.1 ENST00000667225.1 ENST00000667416.1 ENST00000667776.1 ENST00000669153.1 ENST00000669242.1 ENST00000669312.1 ENST00000671558.1 |
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| CDS CCA 72 bp | GGTTGTCTGGTAAGGGTCTGCTCTCTGCTTCTAGGATaGCACCTTGCTGCTGTGTCCTCTGATGGTAAACTA | + |
|
Preference number: 6 (lower is better) Translates to: GCLVRVCSLLLG*HLAAVSSDGKL Trigger: TAGTTTACCATCAGAGGACACAGCAGCAAGGTGCCATCCTAGAAGCAGAGAGCAGACCCTTACCAGACAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580336.1 |
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| CDS CAA 72 bp | GTTGTTGCATGCTCCTCCAGATGGCTTTGGCTTCTGTaGACAGTTGGGTCTGGACAGAGTAGGGGTGTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: VVACSSRWLWLL*TVGSGQSRGVL Trigger: TAAGACACCCCTACTCTGTCCAGACCCAACTGTCAACAGAAGCCAAAGCCATCTGGAGGAGCATGCAACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000577403.6 ENST00000582862.6 ENST00000584090.5 ENST00000653213.1 ENST00000657423.1 ENST00000659094.1 ENST00000661646.1 ENST00000663392.1 ENST00000665133.1 ENST00000667416.1 ENST00000669312.1 |
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| CDS CAA 90 bp | ACTCGAGGGGCCTCACATGCACTGTCTGTTTTTCCCAAAGAACATTaGCTGAGTTTAGAACCAGTGTCGGAGGCCCAGGAGTTTGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: TRGASHALSVFPKEH*LSLEPVSEAQEFGR Trigger: TCTTCCAAACTCCTGGGCCTCCGACACTGGTTCTAAACTCAGCAAATGTTCTTTGGGAAAAACAGACAGTGCATGTGAGGCCCCTCGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000584090.5 ENST00000653775.1 ENST00000657423.1 ENST00000657618.1 ENST00000660475.1 ENST00000660947.1 ENST00000661931.1 ENST00000669242.1 |
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| CDS CAA 90 bp | TTGTTTCTTGTTGTTGCATGCTCCTCCAGATGGCTTTGGCTTCTGTaGACAGTTGGGTCTGGACAGAGTAGGGGTGTCTTACCTGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LFLVVACSSRWLWLL*TVGSGQSRGVLPVG Trigger: TCCCACAGGTAAGACACCCCTACTCTGTCCAGACCCAACTGTCAACAGAAGCCAAAGCCATCTGGAGGAGCATGCAACAACAAGAAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659094.1 ENST00000663392.1 |
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| CDS TCA 72 bp | AGCTCCTCAGAGTTAGAGCATGCAGGCCAGGAGTGCTaGGTTGAGCCCAGATCTTCTGAAATCATCCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SSSELEHAGQEC*VEPRSSEIIQK Trigger: TTTCTGGATGATTTCAGAAGATCTGGGCTCAACTCAGCACTCCTGGCCTGCATGCTCTAACTCTGAGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663392.1 |
||
| CDS GCA 72 bp | GCTGATCAGACTGTAGAGCAGCTGCCAAGGTATCCATaGCAGTTACTGCAATCACCACCCCTGCTTTTAATC | + |
|
Preference number: 6 (lower is better) Translates to: ADQTVEQLPRYP*QLLQSPPLLLI Trigger: GATTAAAAGCAGGGGTGGTGATTGCAGTAACTGGCATGGATACCTTGGCAGCTGCTCTACAGTCTGATCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658090.1 |
||
| CDS CCA 72 bp | CCACAGTCTCACAGTACAGAGGAAATACAAATGTGTTaGCGAGAGGGCCTTCCTCATCTGCATGCCAATCTC | + |
|
Preference number: 6 (lower is better) Translates to: PQSHSTEEIQMC*REGLPHLHANL Trigger: GAGATTGGCATGCAGATGAGGAAGGCCCTCTCGCCAACACATTTGTATTTCCTCTGTACTGTGAGACTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000584090.5 ENST00000653775.1 ENST00000657423.1 ENST00000657618.1 ENST00000660475.1 ENST00000660947.1 ENST00000661931.1 ENST00000669242.1 |
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| CDS CCA 72 bp | CAGTTGGGTCTGGACAGAGTAGGGGTGTCTTACCTGTaGGATAAAGCCAGTCATAAAGCTATGGTGATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QLGLDRVGVSYL*DKASHKAMVIR Trigger: CCTGATCACCATAGCTTTATGACTGGCTTTATCCCACAGGTAAGACACCCCTACTCTGTCCAGACCCAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659094.1 |
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| CDS CAA 72 bp | CCCACAGTCTCACAGTACAGAGGAAATACAAATGTGTaGGCGAGAGGGCCTTCCTCATCTGCATGCCAATCT | + |
|
Preference number: 6 (lower is better) Translates to: PTVSQYRGNTNV*ARGPSSSACQS Trigger: AGATTGGCATGCAGATGAGGAAGGCCCTCTCGCCAACACATTTGTATTTCCTCTGTACTGTGAGACTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000584090.5 ENST00000653775.1 ENST00000657423.1 ENST00000657618.1 ENST00000660475.1 ENST00000660947.1 ENST00000661931.1 ENST00000669242.1 |
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| CDS CAA 72 bp | GCCTCACATGCACTGTCTGTTTTTCCCAAAGAACATTaGCTGAGTTTAGAACCAGTGTCGGAGGCCCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ASHALSVFPKEH*LSLEPVSEAQE Trigger: CTCCTGGGCCTCCGACACTGGTTCTAAACTCAGCAAATGTTCTTTGGGAAAAACAGACAGTGCATGTGAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000584090.5 ENST00000653775.1 ENST00000657423.1 ENST00000657618.1 ENST00000660475.1 ENST00000660947.1 ENST00000661931.1 ENST00000669242.1 |
||
| CDS CAA 90 bp | TTGTTTCTTGTTGTTGCATGCTCCTCCAGATGGCTTTGGCTTCTGTaGACAGTTGGGTCTGGACAGAGTAGGGGTGTCTTACAGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LFLVVACSSRWLWLL*TVGSGQSRGVLQFW Trigger: CCAGAACTGTAAGACACCCCTACTCTGTCCAGACCCAACTGTCAACAGAAGCCAAAGCCATCTGGAGGAGCATGCAACAACAAGAAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653213.1 |
||
| CDS TCA 72 bp | TGTGATCTTCCTGAGGTCACTTCAAAGTGCCTTCAGTaGGGGAGAATGTGCTTAGGCAGAGCAACTCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: CDLPEVTSKCLQ*GRMCLGRATLS Trigger: AGAGAGAGTTGCTCTGCCTAAGCACATTCTCCCTCACTGAAGGCACTTTGAAGTGACCTCAGGAAGATCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658090.1 |
||
| CDS GCA 72 bp | TTTCTGCAACTCAGCGATGGCAATATTTCTGCCTGTTaGTCAGCGTGTAGGACTTTTCCTCAGGCTTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: FLQLSDGNISAC*SACRTFPQACC Trigger: GCAACAAGCCTGAGGAAAAGTCCTACACGCTGAGCAACAGGCAGAAATATTGCCATCGCTGAGTTGCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412816.7 |
||
| CDS CCA 72 bp | TTGTTTCTTGTTGTTGCATGCTCCTCCAGATGGCTTTaGCTTCTGTTGACAGTTGGGTCTGGACAGAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LFLVVACSSRWL*LLLTVGSGQSR Trigger: CCTACTCTGTCCAGACCCAACTGTCAACAGAAGCCAAAGCCATCTGGAGGAGCATGCAACAACAAGAAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000577403.6 ENST00000582862.6 ENST00000584090.5 ENST00000653213.1 ENST00000657423.1 ENST00000659094.1 ENST00000661646.1 ENST00000663392.1 ENST00000665133.1 ENST00000667416.1 ENST00000669312.1 |
||
| CDS CCA 72 bp | CCATCCATAGGTCTGAAGGGGCAAGGGTCAAGAGCATaGAGAAGACGTTACTTGATAAGAAGAGTAGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSIGLKGQGSRA*RRRYLIRRVAF Trigger: GAAGGCTACTCTTCTTATCAAGTAACGTCTTCTCCATGCTCTTGACCCTTGCCCCTTCAGACCTATGGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580336.1 |
||
| CDS CAA 90 bp | AGGCTGTGTCTTCCCCAGACTGCAAATCTGAAGAAGAGATCCCTCTaGTCTTCAGCAGGTAATTTCTTGAAATTCAGACTGGCCGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: RLCLPQTANLKKRSL*SSAGNFLKFRLADV Trigger: GACATCGGCCAGTCTGAATTTCAAGAAATTACCTGCTGAAGACAAGAGGGATCTCTTCTTCAGATTTGCAGTCTGGGGAAGACACAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 37 transcripts: ENST00000412816.7 ENST00000577403.6 ENST00000577867.5 ENST00000578835.5 ENST00000581430.5 ENST00000582862.6 ENST00000584090.5 ENST00000584492.5 ENST00000653213.1 ENST00000653775.1 ENST00000654559.1 ENST00000655957.1 ENST00000657121.1 ENST00000657423.1 ENST00000657618.1 ENST00000657919.1 ENST00000659094.1 ENST00000659289.1 ENST00000660358.1 ENST00000660475.1 ENST00000660947.1 ENST00000660964.1 ENST00000661233.1 ENST00000661646.1 ENST00000661852.1 ENST00000661931.1 ENST00000663392.1 ENST00000663512.1 ENST00000665133.1 ENST00000666542.1 ENST00000667416.1 ENST00000667776.1 ENST00000669153.1 ENST00000669242.1 ENST00000669312.1 ENST00000671558.1 ENST00000671645.1 |
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| CDS CAA 90 bp | AGCAGGCCTACATTCCATTTGGAGAATCAAGAGGAGAGCATTCCTTaGCCTTTTCCAGCTTTTAAAGGTTGCCTGCACTCCATGGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SRPTFHLENQEESIP*PFPAFKGCLHSMAH Trigger: ATGAGCCATGGAGTGCAGGCAACCTTTAAAAGCTGGAAAAGGCAAAGGAATGCTCTCCTCTTGATTCTCCAAATGGAATGTAGGCCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671645.1 |
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| CDS GCA 72 bp | ATTGTTGTTCCATTTTCCTCATGCTGCGTGTTTAAGTaGAGTTCTGGAGGCCGAGAAGTCCAAGATCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: IVVPFSSCCVFK*SSGGREVQDHG Trigger: GCCATGATCTTGGACTTCTCGGCCTCCAGAACTGCACTTAAACACGCAGCATGAGGAAAATGGAACAACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000577403.6 ENST00000653775.1 ENST00000657618.1 ENST00000658090.1 ENST00000659094.1 ENST00000659289.1 ENST00000660475.1 ENST00000660964.1 ENST00000661646.1 ENST00000661852.1 ENST00000667416.1 ENST00000667776.1 ENST00000669153.1 ENST00000669242.1 ENST00000669312.1 ENST00000671558.1 |
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| CDS TCA 72 bp | CTTACCTGTGGGATAAAGCCAGTCATAAAGCTATGGTaGTCAGGAGGGTGTGGTGTTGCTGGAAAAATTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LTCGIKPVIKLW*SGGCGVAGKID Trigger: GTCAATTTTTCCAGCAACACCACACCCTCCTGATCACCATAGCTTTATGACTGGCTTTATCCCACAGGTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659094.1 |
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| CDS TCA 72 bp | GAGATCAAGTTAGCACAGCTGACCATAAAGCTATGGTaGTCAGGAGGGTGTGGTGTTGCTGGAAAAATTGAC | + |
|
Preference number: 6 (lower is better) Translates to: EIKLAQLTIKLW*SGGCGVAGKID Trigger: GTCAATTTTTCCAGCAACACCACACCCTCCTGATCACCATAGCTTTATGGTCAGCTGTGCTAACTTGATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667225.1 |
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| CDS GCA 72 bp | ACAAATGTGTTGGCGAGAGGGCCTTCCTCATCTGCATaGCAATCTCCCCTTCAAGACATTTGTCATATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TNVLARGPSSSA*QSPLQDICHIL Trigger: CAAAATATGACAAATGTCTTGAAGGGGAGATTGGCATGCAGATGAGGAAGGCCCTCTCGCCAACACATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000584090.5 ENST00000653775.1 ENST00000657423.1 ENST00000657618.1 ENST00000660475.1 ENST00000660947.1 ENST00000661931.1 ENST00000669242.1 |
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| CDS GCA 72 bp | CTTCAGGGGAGATCAGTCCTTTCTTTAAGGCATTTATaGCTAGTGCTCCACTATTGGAACGCTAAGCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LQGRSVLSLRHL*LVLHYWNAKLV Trigger: CACAAGCTTAGCGTTCCAATAGTGGAGCACTAGGCATAAATGCCTTAAAGAAAGGACTGATCTCCCCTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657919.1 ENST00000660358.1 |
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| CDS CCA 72 bp | ACAATTTCACCAATAATTGGACAATTGCATCAGTTCTaGAGGCCGAGAAGTCCAAGATCATGGCACCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TISPIIGQLHQF*RPRSPRSWHQL Trigger: CAGCTGGTGCCATGATCTTGGACTTCTCGGCCTCCAGAACTGATGCAATTGTCCAATTATTGGTGAAATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581430.5 |
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| CDS CAA 72 bp | GCTATGGTGATCAGGAGGGTGTGGTGTTGCTCAAGATaGTTGTTCCATTTTCCTCATGCTGCGTGTTTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: AMVIRRVWCCSR*LFHFPHAACLS Trigger: ACTTAAACACGCAGCATGAGGAAAATGGAACAACAATCTTGAGCAACACCACACCCTCCTGATCACCATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000577403.6 ENST00000667776.1 ENST00000669153.1 |
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| CDS TCA 72 bp | TCCCTAGAGGTAGCAGCTGCTCCTACTTTGCTGTTTTaGAAGTCCTTAGAATTGTCTCTTGCGTCATTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLEVAAAPTLLF*KSLELSLASLV Trigger: CACTAATGACGCAAGAGACAATTCTAAGGACTTTCAAAACAGCAAAGTAGGAGCAGCTGCTACCTCTAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 36 transcripts: ENST00000412816.7 ENST00000577403.6 ENST00000578835.5 ENST00000581212.1 ENST00000582862.6 ENST00000584090.5 ENST00000584492.5 ENST00000653213.1 ENST00000653775.1 ENST00000654559.1 ENST00000655957.1 ENST00000657121.1 ENST00000657423.1 ENST00000657618.1 ENST00000657919.1 ENST00000659094.1 ENST00000659289.1 ENST00000660358.1 ENST00000660475.1 ENST00000660947.1 ENST00000660964.1 ENST00000661233.1 ENST00000661646.1 ENST00000661852.1 ENST00000661931.1 ENST00000663392.1 ENST00000663512.1 ENST00000665133.1 ENST00000666542.1 ENST00000667416.1 ENST00000667776.1 ENST00000669153.1 ENST00000669242.1 ENST00000669312.1 ENST00000671558.1 ENST00000671645.1 |
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| CDS TCA 72 bp | CAGGATTCTCCAGAGAAACTAAGGAATTGGCCCATGTaGCTGTGGAGATTGGCATGTCCAAAATTTGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: QDSPEKLRNWPM*LWRLACPKFVG Trigger: ACCTACAAATTTTGGACATGCCAATCTCCACAGTCACATGGGCCAATTCCTTAGTTTCTCTGGAGAATCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000577867.5 ENST00000578835.5 ENST00000581212.1 ENST00000584492.5 ENST00000657919.1 ENST00000660358.1 |
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| CDS GCA 72 bp | TGGACAATTGCATCCCTCATCCCTAGAGGTAGCAGCTaGTCCTACTTTGCTGTTTTGAAAGTCCTTAGAATT | + |
|
Preference number: 6 (lower is better) Translates to: WTIASLIPRGSS*SYFAVLKVLRI Trigger: AATTCTAAGGACTTTCAAAACAGCAAAGTAGGAGCAGCTGCTACCTCTAGGGATGAGGGATGCAATTGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 18 transcripts: ENST00000412816.7 ENST00000577403.6 ENST00000578835.5 ENST00000584090.5 ENST00000654559.1 ENST00000655957.1 ENST00000657423.1 ENST00000657618.1 ENST00000659094.1 ENST00000660358.1 ENST00000660947.1 ENST00000660964.1 ENST00000661931.1 ENST00000666542.1 ENST00000669153.1 ENST00000669242.1 ENST00000669312.1 ENST00000671558.1 |
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| CDS GCA 72 bp | AAATACAAATGTGTTGGCGAGAGGGCCTTCCTCATCTaGATGCCAATCTCCCCTTCAAGACATTTGTCATAT | + |
|
Preference number: 6 (lower is better) Translates to: KYKCVGERAFLI*MPISPSRHLSY Trigger: ATATGACAAATGTCTTGAAGGGGAGATTGGCATGCAGATGAGGAAGGCCCTCTCGCCAACACATTTGTATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000584090.5 ENST00000653775.1 ENST00000657423.1 ENST00000657618.1 ENST00000660475.1 ENST00000660947.1 ENST00000661931.1 ENST00000669242.1 |
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| CDS CAA 72 bp | ACATTCCATTTGGAGAATCAAGAGGAGAGCATTCCTTaGCCTTTTCCAGCTTTTAAAGGTTGCCTGCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: TFHLENQEESIP*PFPAFKGCLHS Trigger: GGAGTGCAGGCAACCTTTAAAAGCTGGAAAAGGCAAAGGAATGCTCTCCTCTTGATTCTCCAAATGGAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671645.1 |
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| CDS TCA 72 bp | GGTGATTTTCACCTACAACACAACATAAAGCTATGGTaGTCAGGAGGGTGTGGTGTTGCTGGAAAAATTGAC | + |
|
Preference number: 6 (lower is better) Translates to: GDFHLQHNIKLW*SGGCGVAGKID Trigger: GTCAATTTTTCCAGCAACACCACACCCTCCTGATCACCATAGCTTTATGTTGTGTTGTAGGTGAAAATCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658090.1 |
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| CDS CCA 72 bp | GTGTCTTACCATAAAGCTATGGTGATCAGGAGGGTGTaGTGTTGCTCAAGATTGTTGTTCCATTTTCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VSYHKAMVIRRV*CCSRLLFHFPH Trigger: ATGAGGAAAATGGAACAACAATCTTGAGCAACACCACACCCTCCTGATCACCATAGCTTTATGGTAAGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577403.6 |
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| CDS CAA 72 bp | ATCCCTAGAGGTAGCAGCTGCTCCTACTTTGCTGTTTaGAAAGTCCTTAGAATTGTCTCTTGCGTCATTAGT | + |
|
Preference number: 6 (lower is better) Translates to: IPRGSSCSYFAV*KVLRIVSCVIS Trigger: ACTAATGACGCAAGAGACAATTCTAAGGACTTTCAAAACAGCAAAGTAGGAGCAGCTGCTACCTCTAGGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 36 transcripts: ENST00000412816.7 ENST00000577403.6 ENST00000578835.5 ENST00000581212.1 ENST00000582862.6 ENST00000584090.5 ENST00000584492.5 ENST00000653213.1 ENST00000653775.1 ENST00000654559.1 ENST00000655957.1 ENST00000657121.1 ENST00000657423.1 ENST00000657618.1 ENST00000657919.1 ENST00000659094.1 ENST00000659289.1 ENST00000660358.1 ENST00000660475.1 ENST00000660947.1 ENST00000660964.1 ENST00000661233.1 ENST00000661646.1 ENST00000661852.1 ENST00000661931.1 ENST00000663392.1 ENST00000663512.1 ENST00000665133.1 ENST00000666542.1 ENST00000667416.1 ENST00000667776.1 ENST00000669153.1 ENST00000669242.1 ENST00000669312.1 ENST00000671558.1 ENST00000671645.1 |
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| CDS CAA 90 bp | AGGAGGTTAGAAGTTGGAATTCTCTCTTTCTCTCTCTCTCTCTCCTaGAATATTCCCACTTCCAAGTCAACACTAGATGTTCTCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RRLEVGILSFSLSLS*NIPTSKSTLDVLLL Trigger: AAGGAGGAGAACATCTAGTGTTGACTTGGAAGTGGGAATATTCAAGGAGAGAGAGAGAGAGAAAGAGAGAATTCCAACTTCTAACCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657121.1 ENST00000659289.1 ENST00000661646.1 ENST00000671558.1 |
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| CDS TCA 72 bp | GTGGTTAGGTTAGCTAATAAATTTGTTTCTTGTTGTTaGGTTCTGGAGGCCGAGAAGTCCAAGATCATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VVRLANKFVSCC*VLEAEKSKIMA Trigger: TGCCATGATCTTGGACTTCTCGGCCTCCAGAACTCAACAACAAGAAACAAATTTATTAGCTAACCTAACCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412816.7 |
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| CDS GCA 72 bp | TTTTTGAGTTTCTCCCTCATCCCTAGAGGTAGCAGCTaGTCCTACTTTGCTGTTTTGAAAGTCCTTAGAATT | + |
|
Preference number: 6 (lower is better) Translates to: FLSFSLIPRGSS*SYFAVLKVLRI Trigger: AATTCTAAGGACTTTCAAAACAGCAAAGTAGGAGCAGCTGCTACCTCTAGGGATGAGGGAGAAACTCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 18 transcripts: ENST00000581212.1 ENST00000582862.6 ENST00000584492.5 ENST00000653213.1 ENST00000653775.1 ENST00000657121.1 ENST00000657919.1 ENST00000659289.1 ENST00000660475.1 ENST00000661233.1 ENST00000661646.1 ENST00000661852.1 ENST00000663392.1 ENST00000663512.1 ENST00000665133.1 ENST00000667416.1 ENST00000667776.1 ENST00000671645.1 |
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| CDS GCA 72 bp | GGAACGCTAAGCTTGTGGGATTTATTTATATCCTACTaGTCAAGGTCATTGCCAAGGTCTGATTTTTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: GTLSLWDLFISY*SRSLPRSDFSH Trigger: GTGTGAAAAATCAGACCTTGGCAATGACCTTGAGCAGTAGGATATAAATAAATCCCACAAGCTTAGCGTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000657919.1 ENST00000660358.1 |
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| CDS CCA 72 bp | TTGTTGTTGCATAAAGCTATGGTGATCAGGAGGGTGTaGTGTTGCTCAAGATTGTTGTTCCATTTTCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LLLHKAMVIRRV*CCSRLLFHFPH Trigger: ATGAGGAAAATGGAACAACAATCTTGAGCAACACCACACCCTCCTGATCACCATAGCTTTATGCAACAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667776.1 ENST00000669153.1 |
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| CDS CCA 72 bp | GCTAAAATCAATGTGTTAGCAGGCCTACATTCCATTTaGAGAATCAAGAGGAGAGCATTCCTTTGCCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AKINVLAGLHSI*RIKRRAFLCLF Trigger: GAAAAGGCAAAGGAATGCTCTCCTCTTGATTCTCCAAATGGAATGTAGGCCTGCTAACACATTGATTTTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671645.1 |
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| CDS CAA 90 bp | TGTAACCTGAAGTCTGTGGCTTGTCTTTATAAGGTTTGGCTTGATTaGCCTTTTAAGTGGAGTCCTTTGTATTCTTCCAAGGTGGAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: CNLKSVACLYKVWLD*PFKWSPLYSSKVEV Trigger: TACCTCCACCTTGGAAGAATACAAAGGACTCCACTTAAAAGGCAAATCAAGCCAAACCTTATAAAGACAAGCCACAGACTTCAGGTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655957.1 ENST00000667225.1 |
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| CDS TCA 72 bp | TTGCAAGGAAAGCAAGTTCTTCAGACGGAAAGGAAATaGTACCAGATGAAAGCTCAGATCATAAAGCTATGG | + |
|
Preference number: 6 (lower is better) Translates to: LQGKQVLQTERK*YQMKAQIIKLW Trigger: CCATAGCTTTATGATCTGAGCTTTCATCTGGTATCATTTCCTTTCCGTCTGAAGAACTTGCTTTCCTTGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581212.1 |
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| CDS TCA 72 bp | CCAGATCTTCTGAAATCATCCAGAAATAAAGCCTGTTaGCTGAACCCAACTTATACTGCAATCAAACCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PDLLKSSRNKAC*LNPTYTAIKPS Trigger: TGAGGGTTTGATTGCAGTATAAGTTGGGTTCAGTCAACAGGCTTTATTTCTGGATGATTTCAGAAGATCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663392.1 |
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| CDS GCA 72 bp | GTGGTTAGGTTAGCTAATAAATTTGTTTCTTGTTGTTaGTGTAAGAAACATGCTCCTCCAGATGGCTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VVRLANKFVSCC*CKKHAPPDGFG Trigger: GCCAAAGCCATCTGGAGGAGCATGTTTCTTACAGCAACAACAAGAAACAAATTTATTAGCTAACCTAACCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660964.1 |
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| CDS CCA 72 bp | CACCTTGCTGCTGTGTCCTCTGATGGTAAACGTTCATaGATTGAAAGACACTATATTGTGAATACATTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: HLAAVSSDGKRS*IERHYIVNTLC Trigger: ACACAATGTATTCACAATATAGTGTCTTTCAATCCATGAACGTTTACCATCAGAGGACACAGCAGCAAGGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582570.1 |
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| CDS CCA 72 bp | CTCAGTTGGAAATCAAAATGTGGAAAGAACAATGGATaGCTCCTCTCTCTCTCATACCAAGAATTGGAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: LSWKSKCGKNNG*LLSLSYQELEL Trigger: TAACTCCAATTCTTGGTATGAGAGAGAGAGGAGCCATCCATTGTTCTTTCCACATTTTGATTTCCAACTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582570.1 |
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| CDS CAA 90 bp | TGTGGAAAGAACAATGGATGGCTCCTCTCTCTCTCATACCAAGAATaGGAGTTAGAGAACACAGATCGCATCTTAAGAAATAATCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: CGKNNGWLLSLSYQE*ELENTDRILRNNHF Trigger: GAAATGATTATTTCTTAAGATGCGATCTGTGTTCTCTAACTCCAATTCTTGGTATGAGAGAGAGAGGAGCCATCCATTGTTCTTTCCACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582570.1 |
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| CDS CAA 90 bp | TCCTTACTGGTTCCAGGATTCCATTTCCCTTCTCTTGTTCTGTTGTaGAAGCATTTTGGCAGGATATTGTCTTGGACAAAATTCTCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SLLVPGFHFPSLVLL*KHFGRILSWTKFSN Trigger: ATTTGAGAATTTTGTCCAAGACAATATCCTGCCAAAATGCTTCAACAACAGAACAAGAGAAGGGAAATGGAATCCTGGAACCAGTAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667225.1 |
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| CDS TCA 72 bp | ACCATGAAGTGGAAATTCGAGTCCATATCAAAAGAATaGCAGCATTTTCTTGTCTCGCTCTTGCATTTACAC | + |
|
Preference number: 6 (lower is better) Translates to: TMKWKFESISKE*QHFLVSLLHLH Trigger: GTGTAAATGCAAGAGCGAGACAAGAAAATGCTGTCATTCTTTTGATATGGACTCGAATTTCCACTTCATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412816.7 |
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| CDS TCA 72 bp | CTGACAATACAATGGCTAAGAACATCCCAGGACTGTTaGAAGACACTAATTCACAAATTCAAGCCCAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: LTIQWLRTSQDC*KTLIHKFKPSK Trigger: TTTACTGGGCTTGAATTTGTGAATTAGTGTCTTTCAACAGTCCTGGGATGTTCTTAGCCATTGTATTGTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000582862.6 ENST00000657919.1 ENST00000660358.1 |
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| CDS TCA 72 bp | TCCTTACTCATTCTCAGCTGTATTTCTAAGACTCGGTaGTTTTCACCTACAACACAACATAAAGCTATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLLILSCISKTR*FSPTTQHKAMV Trigger: CACCATAGCTTTATGTTGTGTTGTAGGTGAAAATCACCGAGTCTTAGAAATACAGCTGAGAATGAGTAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658090.1 |
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| CDS TCA 72 bp | GAAGCCGATCACATGAGACCACCACTAAATGATGTTTaGAAGGATGTACTTCAGAACAAAGGAAAATTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: EADHMRPPLNDV*KDVLQNKGKFS Trigger: AGAGAATTTTCCTTTGTTCTGAAGTACATCCTTTCAAACATCATTTAGTGGTGGTCTCATGTGATCGGCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657919.1 ENST00000660358.1 |
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| CDS CCA 72 bp | TGTAACCTGAAGTCTGTGGCTTGTCTTTATAAGGTTTaGCTTGATTTGCCTTTTAAGTGGAGTCCTTTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: CNLKSVACLYKV*LDLPFKWSPLY Trigger: ATACAAAGGACTCCACTTAAAAGGCAAATCAAGCCAAACCTTATAAAGACAAGCCACAGACTTCAGGTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655957.1 ENST00000667225.1 |
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| CDS CAA 72 bp | AAGTCTGTGGCTTGTCTTTATAAGGTTTGGCTTGATTaGCCTTTTAAGTGGAGTCCTTTGTATTCTTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: KSVACLYKVWLD*PFKWSPLYSSK Trigger: CTTGGAAGAATACAAAGGACTCCACTTAAAAGGCAAATCAAGCCAAACCTTATAAAGACAAGCCACAGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655957.1 ENST00000667225.1 |
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| CDS CAA 90 bp | TCGGGTTTATTTGAGAATTCTTTAATGCGCCACTCAAATGCTTGTTaGACCCAAATCCATTTTCTTACAGTCTTAGTCTATTTGTGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: SGLFENSLMRHSNAC*TQIHFLTVLVYLCY Trigger: GTAGCACAAATAGACTAAGACTGTAAGAAAATGGATTTGGGTCAAACAAGCATTTGAGTGGCGCATTAAAGAATTCTCAAATAAACCCGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000580336.1 ENST00000582570.1 |
||
| CDS TCA 72 bp | TTCAAATATTTTGTGCAGAACTCAAAACATGTAACCTaGAGTCTGTGGCTTGTCTTTATAAGGTTTGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FKYFVQNSKHVT*SLWLVFIRFGL Trigger: CAAGCCAAACCTTATAAAGACAAGCCACAGACTTCAGGTTACATGTTTTGAGTTCTGCACAAAATATTTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655957.1 ENST00000667225.1 |
||
| CDS CAA 72 bp | TTTGAGAATTCTTTAATGCGCCACTCAAATGCTTGTTaGACCCAAATCCATTTTCTTACAGTCTTAGTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: FENSLMRHSNAC*TQIHFLTVLVY Trigger: ATAGACTAAGACTGTAAGAAAATGGATTTGGGTCAAACAAGCATTTGAGTGGCGCATTAAAGAATTCTCAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000580336.1 ENST00000582570.1 |
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