Pregenerated sensors for LINC00469 (Homo sapiens)
Ensembl gene IDs: ENSG00000177338Ensembl transcript IDs: ENST00000321800.11, ENST00000544677.1, ENST00000579749.1, ENST00000665734.1
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGGGCACTGCCCTTGTCCAAGTCAGGGAGGGCGTCTGGCTCGAGTaGTATTTCCAGCATAGCACAGGGTCAGGCCGGCAGATGAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: QGTALVQVREGVWLE*YFQHSTGSGRQMRG Trigger: CCCTCTCATCTGCCGGCCTGACCCTGTGCTATGCTGGAAATAGCACTCGAGCCAGACGCCCTCCCTGACTTGGACAAGGGCAGTGCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS CCA 90 bp | CTCTCCTTCCAGGGCACTGCCCTTGTCCAAGTCAGGGAGGGCGTCTaGCTCGAGTGCTATTTCCAGCATAGCACAGGGTCAGGCCGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LSFQGTALVQVREGV*LECYFQHSTGSGRQ Trigger: CTGCCGGCCTGACCCTGTGCTATGCTGGAAATAGCACTCGAGCCAGACGCCCTCCCTGACTTGGACAAGGGCAGTGCCCTGGAAGGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS GCA 90 bp | CCGTGCTTCTCCACCTCCCACCTTGCCTCCAGATTGCCGAGCTGTTaGTCCTCCATCGCTTGCAGCAGGGGTTCCAGCTGGAGTCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: PCFSTSHLASRLPSC*SSIACSRGSSWSLQ Trigger: TTGCAGACTCCAGCTGGAACCCCTGCTGCAAGCGATGGAGGAGCAACAGCTCGGCAATCTGGAGGCAAGGTGGGAGGTGGAGAAGCACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000321800.11 ENST00000544677.1 |
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| CDS GCA 90 bp | CGACCACGGCGCCCACAAGGTGCCCCTCATAAGTGTTCTGGAGGCTaGGAGCACAGCCAAAAAGATGAACAGCTCCTGTCCCTGCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: RPRRPQGAPHKCSGG*EHSQKDEQLLSLRW Trigger: CCACCGCAGGGACAGGAGCTGTTCATCTTTTTGGCTGTGCTCGCAGCCTCCAGAACACTTATGAGGGGCACCTTGTGGGCGCCGTGGTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS GCA 90 bp | TCACCAGCTGCCCCGGGCTCCTGGTCACTCTCCTGCACACCCCATTaGCCCATTGCAGCCCTCGGAGGTTCTGTAAACAGCTGCTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: SPAAPGSWSLSCTPH*PIAALGGSVNSCFC Trigger: ACAGAAGCAGCTGTTTACAGAACCTCCGAGGGCTGCAATGGGGCAATGGGGTGTGCAGGAGAGTGACCAGGAGCCCGGGGCAGCTGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS CCA 90 bp | ACTGGTCTGGCCTGCTGGGAAGACATTGTCCACTCTGGCCTGGCCTaGCCTGAGCAGGTATGTGAGCGACAACTGCAGAGAGTGCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: TGLACWEDIVHSGLA*PEQVCERQLQRVPA Trigger: GGCTGGCACTCTCTGCAGTTGTCGCTCACATACCTGCTCAGGCCAGGCCAGGCCAGAGTGGACAATGTCTTCCCAGCAGGCCAGACCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS CCA 90 bp | GGGAGACTGGTCTGGCCTGCTGGGAAGACATTGTCCACTCTGGCCTaGCCTGGCCTGAGCAGGTATGTGAGCGACAACTGCAGAGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: GRLVWPAGKTLSTLA*PGLSRYVSDNCREC Trigger: GCACTCTCTGCAGTTGTCGCTCACATACCTGCTCAGGCCAGGCCAGGCCAGAGTGGACAATGTCTTCCCAGCAGGCCAGACCAGTCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS GCA 90 bp | TCCCACCTTGCCTCCAGATTGCCGAGCTGTTGCTCCTCCATCGCTTaGAGCAGGGGTTCCAGCTGGAGTCTGCAAAGCCAGGGCGATTCT | + |
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Preference number: 5 (lower is better) Translates to: SHLASRLPSCCSSIA*SRGSSWSLQSQGDS Trigger: AGAATCGCCCTGGCTTTGCAGACTCCAGCTGGAACCCCTGCTGCAAGCGATGGAGGAGCAACAGCTCGGCAATCTGGAGGCAAGGTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000321800.11 ENST00000544677.1 |
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| CDS GCA 90 bp | TTGCCCCATTGCAGCCCTCGGAGGTTCTGTAAACAGCTGCTTCTGTaGCCTCTCCTTCCAGGGCACTGCCCTTGTCCAAGTCAGGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: LPHCSPRRFCKQLLL*PLLPGHCPCPSQGG Trigger: CCCTCCCTGACTTGGACAAGGGCAGTGCCCTGGAAGGAGAGGGCACAGAAGCAGCTGTTTACAGAACCTCCGAGGGCTGCAATGGGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS CCA 90 bp | TTGCCGAGCTGTTGCTCCTCCATCGCTTGCAGCAGGGGTTCCAGCTaGAGTCTGCAAAGCCAGGGCGATTCTCCCTTCCCCATAAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: LPSCCSSIACSRGSS*SLQSQGDSPFPIRD Trigger: GTCCCTTATGGGGAAGGGAGAATCGCCCTGGCTTTGCAGACTCCAGCTGGAACCCCTGCTGCAAGCGATGGAGGAGCAACAGCTCGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000321800.11 ENST00000544677.1 |
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| CDS TCA 90 bp | GGCTCGAGTGCTATTTCCAGCATAGCACAGGGTCAGGCCGGCAGATaGGAGGGTTTGGTGAGTGATACAGCAGCCTCAGCCTCCTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: GSSAISSIAQGQAGR*EGLVSDTAASASWE Trigger: CTCCCAGGAGGCTGAGGCTGCTGTATCACTCACCAAACCCTCTCATCTGCCGGCCTGACCCTGTGCTATGCTGGAAATAGCACTCGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS GCA 90 bp | AGACTTCGTTTCCGTGCTTCTCCACCTCCCACCTTGCCTCCAGATTaGCGAGCTGTTGCTCCTCCATCGCTTGCAGCAGGGGTTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: RLRFRASPPPTLPPD*RAVAPPSLAAGVPA Trigger: AGCTGGAACCCCTGCTGCAAGCGATGGAGGAGCAACAGCTCGGCAATCTGGAGGCAAGGTGGGAGGTGGAGAAGCACGGAAACGAAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000321800.11 ENST00000544677.1 |
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| CDS GCA 90 bp | GGGAGTGGTTCACTTTTGCTGGTTGAGCCAGAGACTTCGTTTCCGTaGTTCTCCACCTCCCACCTTGCCTCCAGATTGCCGAGCTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: GSGSLLLVEPETSFP*FSTSHLASRLPSCC Trigger: GCAACAGCTCGGCAATCTGGAGGCAAGGTGGGAGGTGGAGAAGCACGGAAACGAAGTCTCTGGCTCAACCAGCAAAAGTGAACCACTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000321800.11 ENST00000544677.1 |
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| CDS GCA 90 bp | AGGTTCTGTAAACAGCTGCTTCTGTGCCCTCTCCTTCCAGGGCACTaGCCTTGTCCAAGTCAGGGAGGGCGTCTGGCTCGAGTGCTATTT | + |
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Preference number: 5 (lower is better) Translates to: RFCKQLLLCPLLPGH*PCPSQGGRLARVLF Trigger: AAATAGCACTCGAGCCAGACGCCCTCCCTGACTTGGACAAGGGCAGTGCCCTGGAAGGAGAGGGCACAGAAGCAGCTGTTTACAGAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS CCA 90 bp | GGCTGCGAGCACAGCCAAAAAGATGAACAGCTCCTGTCCCTGCGGTaGGCTGATGAGAGTGGAACGAGGGCACATGTTCCAATGAATCTC | + |
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Preference number: 5 (lower is better) Translates to: GCEHSQKDEQLLSLR*ADESGTRAHVPMNL Trigger: GAGATTCATTGGAACATGTGCCCTCGTTCCACTCTCATCAGCCCACCGCAGGGACAGGAGCTGTTCATCTTTTTGGCTGTGCTCGCAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS CCA 90 bp | ATTGCCGAGCTGTTGCCAGGTTTCACACGCCGGACATCAGCACCTTaGCTCAAATTGTTGAAAACAGTCCCCTTCGGTCTATCAGCGCCA | + |
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Preference number: 5 (lower is better) Translates to: IAELLPGFTRRTSAP*LKLLKTVPFGLSAP Trigger: TGGCGCTGATAGACCGAAGGGGACTGTTTTCAACAATTTGAGCCAAGGTGCTGATGTCCGGCGTGTGAAACCTGGCAACAGCTCGGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS GCA 90 bp | TCGTGGCGTTGGTATCTCCTTGGCTGGTCTTGCCTCCCAGCTGCATaGTCTGTAAATGTTTGTAGTGAGCGTGAGACACTACAGCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SWRWYLLGWSCLPAA*SVNVCSERETLQLS Trigger: AGAGAGCTGTAGTGTCTCACGCTCACTACAAACATTTACAGAGCATGCAGCTGGGAGGCAAGACCAGCCAAGGAGATACCAACGCCACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS TCA 90 bp | TGCCAGGTTTCACACGCCGGACATCAGCACCTTGGCTCAAATTGTTaGAAACAGTCCCCTTCGGTCTATCAGCGCCATCAGAGACATGTT | + |
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Preference number: 5 (lower is better) Translates to: CQVSHAGHQHLGSNC*KQSPSVYQRHQRHV Trigger: AACATGTCTCTGATGGCGCTGATAGACCGAAGGGGACTGTTTTCAACAATTTGAGCCAAGGTGCTGATGTCCGGCGTGTGAAACCTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS CCA 90 bp | AGTCTGCAAAGCCAGGGCGATTCTCCCTTCCCCATAAGGGACATCTaGATATGTCTGGACACATTTCTGATTGTCACATCTGGGAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: SLQSQGDSPFPIRDI*ICLDTFLIVTSGRV Trigger: CACCCTCCCAGATGTGACAATCAGAAATGTGTCCAGACATATCCAGATGTCCCTTATGGGGAAGGGAGAATCGCCCTGGCTTTGCAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000321800.11 ENST00000544677.1 |
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| CDS CCA 90 bp | AAGATTCTTTCGCCCAGAGCTTCGTGGCGTTGGTATCTCCTTGGCTaGTCTTGCCTCCCAGCTGCATGCTCTGTAAATGTTTGTAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: KILSPRASWRWYLLG*SCLPAACSVNVCSE Trigger: CTCACTACAAACATTTACAGAGCATGCAGCTGGGAGGCAAGACCAGCCAAGGAGATACCAACGCCACGAAGCTCTGGGCGAAAGAATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS TCA 90 bp | ACAGTCCCCTTCGGTCTATCAGCGCCATCAGAGACATGTTGGACGTaGCACCTTTGTGAGCTTTGTACACCTCAATATTCATCAAATGAA | + |
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Preference number: 5 (lower is better) Translates to: TVPFGLSAPSETCWT*HLCELCTPQYSSNE Trigger: TTCATTTGATGAATATTGAGGTGTACAAAGCTCACAAAGGTGTCACGTCCAACATGTCTCTGATGGCGCTGATAGACCGAAGGGGACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS GCA 90 bp | TTCATTCACATTCTCCTTGCAAAGAATGGCGGATGCAGTGAGAGTTaGCGTAAAAGCGATGAAAAAGTCATCGGCAATCCTTACCACATC | + |
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Preference number: 5 (lower is better) Translates to: FIHILLAKNGGCSES*RKSDEKVIGNPYHI Trigger: GATGTGGTAAGGATTGCCGATGACTTTTTCATCGCTTTTACGGCAACTCTCACTGCATCCGCCATTCTTTGCAAGGAGAATGTGAATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS GCA 72 bp | GCCTGGCCTGGCCTGAGCAGGTATGTGAGCGACAACTaGAGAGAGTGCCAGCCTCTGGAAGAGCCCCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: AWPGLSRYVSDN*RECQPLEEPQG Trigger: CCCCTGGGGCTCTTCCAGAGGCTGGCACTCTCTGCAGTTGTCGCTCACATACCTGCTCAGGCCAGGCCAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS GCA 72 bp | ACAGCAGCCTCAGCCTCCTGGGAGACTGGTCTGGCCTaGTGGGAAGACATTGTCCACTCTGGCCTGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: TAASASWETGLA*WEDIVHSGLAW Trigger: CCAGGCCAGGCCAGAGTGGACAATGTCTTCCCAGCAGGCCAGACCAGTCTCCCAGGAGGCTGAGGCTGCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS GCA 72 bp | TCCACCTCCCACCTTGCCTCCAGATTGCCGAGCTGTTaGTCCTCCATCGCTTGCAGCAGGGGTTCCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: STSHLASRLPSC*SSIACSRGSSW Trigger: CCAGCTGGAACCCCTGCTGCAAGCGATGGAGGAGCAACAGCTCGGCAATCTGGAGGCAAGGTGGGAGGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000321800.11 ENST00000544677.1 |
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| CDS GCA 72 bp | GCCCTTGTCCAAGTCAGGGAGGGCGTCTGGCTCGAGTaGTATTTCCAGCATAGCACAGGGTCAGGCCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: ALVQVREGVWLE*YFQHSTGSGRQ Trigger: CTGCCGGCCTGACCCTGTGCTATGCTGGAAATAGCACTCGAGCCAGACGCCCTCCCTGACTTGGACAAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS CAA 72 bp | CTCCACCTCCCACCTTGCCTCCAGATTGCCGAGCTGTaGCTCCTCCATCGCTTGCAGCAGGGGTTCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LHLPPCLQIAEL*LLHRLQQGFQL Trigger: CAGCTGGAACCCCTGCTGCAAGCGATGGAGGAGCAACAGCTCGGCAATCTGGAGGCAAGGTGGGAGGTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000321800.11 ENST00000544677.1 |
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| CDS CAA 90 bp | TCCGTGCTTCTCCACCTCCCACCTTGCCTCCAGATTGCCGAGCTGTaGCTCCTCCATCGCTTGCAGCAGGGGTTCCAGCTGGAGTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SVLLHLPPCLQIAEL*LLHRLQQGFQLESA Trigger: TGCAGACTCCAGCTGGAACCCCTGCTGCAAGCGATGGAGGAGCAACAGCTCGGCAATCTGGAGGCAAGGTGGGAGGTGGAGAAGCACGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000321800.11 ENST00000544677.1 |
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| CDS GCA 72 bp | GCCTCCAGATTGCCGAGCTGTTGCTCCTCCATCGCTTaGAGCAGGGGTTCCAGCTGGAGTCTGCAAAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: ASRLPSCCSSIA*SRGSSWSLQSQ Trigger: CTGGCTTTGCAGACTCCAGCTGGAACCCCTGCTGCAAGCGATGGAGGAGCAACAGCTCGGCAATCTGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000321800.11 ENST00000544677.1 |
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| CDS CCA 72 bp | TGTTGCTCCTCCATCGCTTGCAGCAGGGGTTCCAGCTaGAGTCTGCAAAGCCAGGGCGATTCTCCCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: CCSSIACSRGSS*SLQSQGDSPFP Trigger: GGGGAAGGGAGAATCGCCCTGGCTTTGCAGACTCCAGCTGGAACCCCTGCTGCAAGCGATGGAGGAGCAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000321800.11 ENST00000544677.1 |
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| CDS CAA 90 bp | GAGACTTCGTTTCCGTGCTTCTCCACCTCCCACCTTGCCTCCAGATaGCCGAGCTGTTGCTCCTCCATCGCTTGCAGCAGGGGTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ETSFPCFSTSHLASR*PSCCSSIACSRGSS Trigger: GCTGGAACCCCTGCTGCAAGCGATGGAGGAGCAACAGCTCGGCAATCTGGAGGCAAGGTGGGAGGTGGAGAAGCACGGAAACGAAGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000321800.11 ENST00000544677.1 |
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| CDS TCA 72 bp | ACAGGGTCAGGCCGGCAGATGAGAGGGTTTGGTGAGTaGTACAGCAGCCTCAGCCTCCTGGGAGACTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: TGSGRQMRGFGE*YSSLSLLGDWS Trigger: AGACCAGTCTCCCAGGAGGCTGAGGCTGCTGTATCACTCACCAAACCCTCTCATCTGCCGGCCTGACCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS CCA 72 bp | CTTCTCTGCTGGAAGACTGTCTGGAATATCTCCCCTTaGCCCTCTGGGGGATGCTGCCCACTCCACAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LLCWKTVWNISP*PSGGCCPLHRA Trigger: AGCCCTGTGGAGTGGGCAGCATCCCCCAGAGGGCCAAGGGGAGATATTCCAGACAGTCTTCCAGCAGAGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321800.11 |
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| CDS CCA 72 bp | GCCTGCTGGGAAGACATTGTCCACTCTGGCCTGGCCTaGCCTGAGCAGGTATGTGAGCGACAACTGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: ACWEDIVHSGLA*PEQVCERQLQR Trigger: TCTCTGCAGTTGTCGCTCACATACCTGCTCAGGCCAGGCCAGGCCAGAGTGGACAATGTCTTCCCAGCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS CCA 72 bp | CAGGGCACTGCCCTTGTCCAAGTCAGGGAGGGCGTCTaGCTCGAGTGCTATTTCCAGCATAGCACAGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: QGTALVQVREGV*LECYFQHSTGS Trigger: TGACCCTGTGCTATGCTGGAAATAGCACTCGAGCCAGACGCCCTCCCTGACTTGGACAAGGGCAGTGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS GCA 72 bp | AGAGACTTCGTTTCCGTGCTTCTCCACCTCCCACCTTaGCTCCAGATTGCCGAGCTGTTGCTCCTCCATCGC | + |
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Preference number: 6 (lower is better) Translates to: RDFVSVLLHLPP*LQIAELLLLHR Trigger: GCGATGGAGGAGCAACAGCTCGGCAATCTGGAGGCAAGGTGGGAGGTGGAGAAGCACGGAAACGAAGTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000321800.11 ENST00000544677.1 |
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| CDS GCA 72 bp | GCGAGCACAGCCAAAAAGATGAACAGCTCCTGTCCCTaGGGTGGGCTGATGAGAGTGGAACGAGGGCACATG | + |
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Preference number: 6 (lower is better) Translates to: ASTAKKMNSSCP*GGLMRVERGHM Trigger: CATGTGCCCTCGTTCCACTCTCATCAGCCCACCGCAGGGACAGGAGCTGTTCATCTTTTTGGCTGTGCTCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000321800.11 ENST00000544677.1 ENST00000665734.1 |
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| CDS GCA 72 bp | CTCCTGGTCACTCTCCTGCACACCCCATTGCCCCATTaGAGCCCTCGGAGGTTCTGTAAACAGCTGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LLVTLLHTPLPH*SPRRFCKQLLL Trigger: CAGAAGCAGCTGTTTACAGAACCTCCGAGGGCTGCAATGGGGCAATGGGGTGTGCAGGAGAGTGACCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS CCA 72 bp | GAGGGTTTGGTGAGTGATACAGCAGCCTCAGCCTCCTaGGAGACTGGTCTGGCCTGCTGGGAAGACATTGTC | + |
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Preference number: 6 (lower is better) Translates to: EGLVSDTAASAS*ETGLACWEDIV Trigger: GACAATGTCTTCCCAGCAGGCCAGACCAGTCTCCCAGGAGGCTGAGGCTGCTGTATCACTCACCAAACCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665734.1 |
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| CDS CAA 72 bp | CAGAGACTTCGTTTCCGTGCTTCTCCACCTCCCACCTaGCCTCCAGATTGCCGAGCTGTTGCTCCTCCATCG | + |
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Preference number: 6 (lower is better) Translates to: QRLRFRASPPPT*PPDCRAVAPPS Trigger: CGATGGAGGAGCAACAGCTCGGCAATCTGGAGGCAAGGTGGGAGGTGGAGAAGCACGGAAACGAAGTCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000321800.11 ENST00000544677.1 |
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| CDS CCA 72 bp | CACAGCCAAAAAGATGAACAGCTCCTGTCCCTGCGGTaGGCTGATGAGAGTGGAACGAGGGCACATGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: HSQKDEQLLSLR*ADESGTRAHVP Trigger: TGGAACATGTGCCCTCGTTCCACTCTCATCAGCCCACCGCAGGGACAGGAGCTGTTCATCTTTTTGGCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000321800.11 ENST00000544677.1 ENST00000665734.1 |
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| CDS CCA 72 bp | CCCGGTTTCCACTGCTGGGGAGTGGTTCACTTTTGCTaGTTGAGCCAGAGACTTCGTTTCCGTGCTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PGFHCWGVVHFC*LSQRLRFRASP Trigger: TGGAGAAGCACGGAAACGAAGTCTCTGGCTCAACCAGCAAAAGTGAACCACTCCCCAGCAGTGGAAACCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544677.1 |
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| CDS CCA 72 bp | TCGCCCAGAGCTTCGTGGCGTTGGTATCTCCTTGGCTaGTCTTGCCTCCCAGCTGCATGCTCTGTAAATGTT | + |
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Preference number: 6 (lower is better) Translates to: SPRASWRWYLLG*SCLPAACSVNV Trigger: AACATTTACAGAGCATGCAGCTGGGAGGCAAGACCAGCCAAGGAGATACCAACGCCACGAAGCTCTGGGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS CCA 72 bp | TCTTTCGCCCAGAGCTTCGTGGCGTTGGTATCTCCTTaGCTGGTCTTGCCTCCCAGCTGCATGCTCTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: SFAQSFVALVSP*LVLPPSCMLCK Trigger: TTTACAGAGCATGCAGCTGGGAGGCAAGACCAGCCAAGGAGATACCAACGCCACGAAGCTCTGGGCGAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS CAA 72 bp | AAGCCCCGGTTTCCACTGCTGGGGAGTGGTTCACTTTaGCTGGTTGAGCCAGAGACTTCGTTTCCGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: KPRFPLLGSGSL*LVEPETSFPCF Trigger: GAAGCACGGAAACGAAGTCTCTGGCTCAACCAGCAAAAGTGAACCACTCCCCAGCAGTGGAAACCGGGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544677.1 |
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| CDS CAA 90 bp | GATTGCCGAGCTGTTGCCAGGTTTCACACGCCGGACATCAGCACCTaGGCTCAAATTGTTGAAAACAGTCCCCTTCGGTCTATCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: DCRAVARFHTPDIST*AQIVENSPLRSISA Trigger: GGCGCTGATAGACCGAAGGGGACTGTTTTCAACAATTTGAGCCAAGGTGCTGATGTCCGGCGTGTGAAACCTGGCAACAGCTCGGCAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS TCA 72 bp | GTTTCCACTGCTGGGGAGTGGTTCACTTTTGCTGGTTaGGCCAGAGACTTCGTTTCCGTGCTTCTCCACCTC | + |
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Preference number: 6 (lower is better) Translates to: VSTAGEWFTFAG*ARDFVSVLLHL Trigger: GAGGTGGAGAAGCACGGAAACGAAGTCTCTGGCTCAACCAGCAAAAGTGAACCACTCCCCAGCAGTGGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544677.1 |
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| CDS CCA 72 bp | ATTAGCAAGATTCTTTCGCCCAGAGCTTCGTGGCGTTaGTATCTCCTTGGCTGGTCTTGCCTCCCAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: ISKILSPRASWR*YLLGWSCLPAA Trigger: TGCAGCTGGGAGGCAAGACCAGCCAAGGAGATACCAACGCCACGAAGCTCTGGGCGAAAGAATCTTGCTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS CAA 72 bp | GGTTTCCACTGCTGGGGAGTGGTTCACTTTTGCTGGTaGAGCCAGAGACTTCGTTTCCGTGCTTCTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: GFHCWGVVHFCW*SQRLRFRASPP Trigger: AGGTGGAGAAGCACGGAAACGAAGTCTCTGGCTCAACCAGCAAAAGTGAACCACTCCCCAGCAGTGGAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544677.1 |
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| CDS TCA 72 bp | TCACACGCCGGACATCAGCACCTTGGCTCAAATTGTTaGAAACAGTCCCCTTCGGTCTATCAGCGCCATCAG | + |
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Preference number: 6 (lower is better) Translates to: SHAGHQHLGSNC*KQSPSVYQRHQ Trigger: CTGATGGCGCTGATAGACCGAAGGGGACTGTTTTCAACAATTTGAGCCAAGGTGCTGATGTCCGGCGTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS CCA 72 bp | GTCAGTATTAGCAAGATTCTTTCGCCCAGAGCTTCGTaGCGTTGGTATCTCCTTGGCTGGTCTTGCCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: VSISKILSPRAS*RWYLLGWSCLP Trigger: TGGGAGGCAAGACCAGCCAAGGAGATACCAACGCCACGAAGCTCTGGGCGAAAGAATCTTGCTAATACTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS CAA 72 bp | GCTGTTGCCAGGTTTCACACGCCGGACATCAGCACCTaGGCTCAAATTGTTGAAAACAGTCCCCTTCGGTCT | + |
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Preference number: 6 (lower is better) Translates to: AVARFHTPDIST*AQIVENSPLRS Trigger: AGACCGAAGGGGACTGTTTTCAACAATTTGAGCCAAGGTGCTGATGTCCGGCGTGTGAAACCTGGCAACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS CAA 90 bp | CTGTTGCCAGGTTTCACACGCCGGACATCAGCACCTTGGCTCAAATaGTTGAAAACAGTCCCCTTCGGTCTATCAGCGCCATCAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: LLPGFTRRTSAPWLK*LKTVPFGLSAPSET Trigger: TGTCTCTGATGGCGCTGATAGACCGAAGGGGACTGTTTTCAACAATTTGAGCCAAGGTGCTGATGTCCGGCGTGTGAAACCTGGCAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS CAA 90 bp | TTGCCAGGTTTCACACGCCGGACATCAGCACCTTGGCTCAAATTGTaGAAAACAGTCCCCTTCGGTCTATCAGCGCCATCAGAGACATGT | + |
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Preference number: 6 (lower is better) Translates to: LPGFTRRTSAPWLKL*KTVPFGLSAPSETC Trigger: ACATGTCTCTGATGGCGCTGATAGACCGAAGGGGACTGTTTTCAACAATTTGAGCCAAGGTGCTGATGTCCGGCGTGTGAAACCTGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS TCA 72 bp | AAGGTAATACCTGGGGAGTGGTTCACTTTTGCTGGTTaGGCCAGAGACTTCGTTTCCGTGCTTCTCCACCTC | + |
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Preference number: 6 (lower is better) Translates to: KVIPGEWFTFAG*ARDFVSVLLHL Trigger: GAGGTGGAGAAGCACGGAAACGAAGTCTCTGGCTCAACCAGCAAAAGTGAACCACTCCCCAGGTATTACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321800.11 |
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| CDS CCA 72 bp | CTGTTGCCAGGTTTCACACGCCGGACATCAGCACCTTaGCTCAAATTGTTGAAAACAGTCCCCTTCGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: LLPGFTRRTSAP*LKLLKTVPFGL Trigger: TAGACCGAAGGGGACTGTTTTCAACAATTTGAGCCAAGGTGCTGATGTCCGGCGTGTGAAACCTGGCAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS CAA 72 bp | TTCACACGCCGGACATCAGCACCTTGGCTCAAATTGTaGAAAACAGTCCCCTTCGGTCTATCAGCGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: FTRRTSAPWLKL*KTVPFGLSAPS Trigger: TGATGGCGCTGATAGACCGAAGGGGACTGTTTTCAACAATTTGAGCCAAGGTGCTGATGTCCGGCGTGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS TCA 72 bp | GGGCTGATGAGAGTGGAACGAGGGCACATGTTCCAATaGATCTCTCGTGTCAGTTTTCACTGCAGCACAAAC | + |
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Preference number: 6 (lower is better) Translates to: GLMRVERGHMFQ*ISRVSFHCSTN Trigger: GTTTGTGCTGCAGTGAAAACTGACACGAGAGATTCATTGGAACATGTGCCCTCGTTCCACTCTCATCAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000321800.11 ENST00000544677.1 ENST00000665734.1 |
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| CDS GCA 72 bp | TGGTATCTCCTTGGCTGGTCTTGCCTCCCAGCTGCATaGTCTGTAAATGTTTGTAGTGAGCGTGAGACACTA | + |
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Preference number: 6 (lower is better) Translates to: WYLLGWSCLPAA*SVNVCSERETL Trigger: TAGTGTCTCACGCTCACTACAAACATTTACAGAGCATGCAGCTGGGAGGCAAGACCAGCCAAGGAGATACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS CCA 72 bp | GGGCTCGGTGCCGACGGGAGGGGTTTTAAGTGTCTTTaGCAGGAAGAATTTCTTCTGTCTGTAGTTCAATCT | + |
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Preference number: 6 (lower is better) Translates to: GLGADGRGFKCL*QEEFLLSVVQS Trigger: AGATTGAACTACAGACAGAAGAAATTCTTCCTGCCAAAGACACTTAAAACCCCTCCCGTCGGCACCGAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS CAA 72 bp | AAAGGTAATACCTGGGGAGTGGTTCACTTTTGCTGGTaGAGCCAGAGACTTCGTTTCCGTGCTTCTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: KGNTWGVVHFCW*SQRLRFRASPP Trigger: AGGTGGAGAAGCACGGAAACGAAGTCTCTGGCTCAACCAGCAAAAGTGAACCACTCCCCAGGTATTACCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321800.11 |
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| CDS CAA 90 bp | TCTGATTATAAAGGTAATACCTGGGGAGTGGTTCACTTTTGCTGGTaGAGCCAGAGACTTCGTTTCCGTGCTTCTCCACCTCCCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: SDYKGNTWGVVHFCW*SQRLRFRASPPPTL Trigger: CAAGGTGGGAGGTGGAGAAGCACGGAAACGAAGTCTCTGGCTCAACCAGCAAAAGTGAACCACTCCCCAGGTATTACCTTTATAATCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321800.11 |
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| CDS CCA 72 bp | AGCCAGGGCGATTCTCCCTTCCCCATAAGGGACATCTaGATATGTCTGGACACATTTCTGATTGTCACATCT | + |
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Preference number: 6 (lower is better) Translates to: SQGDSPFPIRDI*ICLDTFLIVTS Trigger: AGATGTGACAATCAGAAATGTGTCCAGACATATCCAGATGTCCCTTATGGGGAAGGGAGAATCGCCCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000321800.11 ENST00000544677.1 |
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| CDS CCA 72 bp | TATAAAGGTAATACCTGGGGAGTGGTTCACTTTTGCTaGTTGAGCCAGAGACTTCGTTTCCGTGCTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: YKGNTWGVVHFC*LSQRLRFRASP Trigger: TGGAGAAGCACGGAAACGAAGTCTCTGGCTCAACCAGCAAAAGTGAACCACTCCCCAGGTATTACCTTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321800.11 |
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| CDS TCA 72 bp | TTCGGTCTATCAGCGCCATCAGAGACATGTTGGACGTaGCACCTTTGTGAGCTTTGTACACCTCAATATTCA | + |
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Preference number: 6 (lower is better) Translates to: FGLSAPSETCWT*HLCELCTPQYS Trigger: TGAATATTGAGGTGTACAAAGCTCACAAAGGTGTCACGTCCAACATGTCTCTGATGGCGCTGATAGACCGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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| CDS GCA 72 bp | ATTCTCCTTGCAAAGAATGGCGGATGCAGTGAGAGTTaGCGTAAAAGCGATGAAAAAGTCATCGGCAATCCT | + |
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Preference number: 6 (lower is better) Translates to: ILLAKNGGCSES*RKSDEKVIGNP Trigger: AGGATTGCCGATGACTTTTTCATCGCTTTTACGGCAACTCTCACTGCATCCGCCATTCTTTGCAAGGAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000579749.1 |
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