Pregenerated sensors for LINC00467 (Homo sapiens)
Ensembl gene IDs: ENSG00000153363Ensembl transcript IDs: ENST00000423222.5, ENST00000448567.2, ENST00000534914.6, ENST00000610948.1, ENST00000653287.1, ENST00000653498.1, ENST00000653721.1, ENST00000654699.1, ENST00000654903.1, ENST00000656082.1, ENST00000656886.1, ENST00000657539.1, ENST00000659698.1, ENST00000660130.1, ENST00000660843.1, ENST00000661331.1, ENST00000662409.1, ENST00000662549.1, ENST00000663427.1, ENST00000663693.1, ENST00000664255.1, ENST00000665802.1, ENST00000666134.1, ENST00000667464.1, ENST00000669618.1, ENST00000670353.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCACAGGGGAGTGCTGGACAGTTGGTGCAGGACAGTGGGTTCAGTaGACTGAGCTTGAGCCGAAGCAGGGCGAGGCATCACCTAACCCG | + |
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Preference number: 5 (lower is better) Translates to: LTGECWTVGAGQWVQ*TELEPKQGEASPNP Trigger: CGGGTTAGGTGATGCCTCGCCCTGCTTCGGCTCAAGCTCAGTGCACTGAACCCACTGTCCTGCACCAACTGTCCAGCACTCCCCTGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663427.1 |
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| CDS CCA 90 bp | GAGGTTCATCTCACAGGGGAGTGCTGGACAGTTGGTGCAGGACAGTaGGTTCAGTGCACTGAGCTTGAGCCGAAGCAGGGCGAGGCATCA | + |
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Preference number: 5 (lower is better) Translates to: EVHLTGECWTVGAGQ*VQCTELEPKQGEAS Trigger: TGATGCCTCGCCCTGCTTCGGCTCAAGCTCAGTGCACTGAACCCACTGTCCTGCACCAACTGTCCAGCACTCCCCTGTGAGATGAACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663427.1 |
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| CDS CCA 90 bp | CATGAGATCTGCAGTTGCAGGCGCCCCTTCACCTTCTGCCATGAGTaGAAGCAGCCTCAGTCTCTTGCCAGAAGCAGATACTGGCGCCAT | + |
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Preference number: 5 (lower is better) Translates to: HEICSCRRPFTFCHE*KQPQSLARSRYWRH Trigger: ATGGCGCCAGTATCTGCTTCTGGCAAGAGACTGAGGCTGCTTCCACTCATGGCAGAAGGTGAAGGGGCGCCTGCAACTGCAGATCTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653721.1 ENST00000654903.1 ENST00000660130.1 ENST00000670353.1 |
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| CDS GCA 90 bp | TCTTCCTCTCTCTCTTGCCTTCTCTCTCACCATGAGATCTGCAGTTaGAGGCGCCCCTTCACCTTCTGCCATGAGTGGAAGCAGCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: SSSLSCLLSHHEICS*RRPFTFCHEWKQPQ Trigger: CTGAGGCTGCTTCCACTCATGGCAGAAGGTGAAGGGGCGCCTGCAACTGCAGATCTCATGGTGAGAGAGAAGGCAAGAGAGAGAGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653721.1 ENST00000654903.1 ENST00000670353.1 |
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| CDS GCA 90 bp | GGTACCTCTTCCTCTCTCTCTTGCCTTCTCTCTCACCATGAGATCTaGAGTTGCAGGCGCCCCTTCACCTTCTGCCATGAGTGGAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: GTSSSLSCLLSHHEI*SCRRPFTFCHEWKQ Trigger: CTGCTTCCACTCATGGCAGAAGGTGAAGGGGCGCCTGCAACTGCAGATCTCATGGTGAGAGAGAAGGCAAGAGAGAGAGGAAGAGGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670353.1 |
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| CDS TCA 90 bp | GTGCTGGGCTCCGCATCCTTCTTTGGCCGCCTTACACCAAAACGCTaGGCTTGGAAATCAAAAGGGTCAGCCCAGTTTCAGTCCCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: VLGSASFFGRLTPKR*AWKSKGSAQFQSLL Trigger: CAAGAGGGACTGAAACTGGGCTGACCCTTTTGATTTCCAAGCTCAGCGTTTTGGTGTAAGGCGGCCAAAGAAGGATGCGGAGCCCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 15 transcripts: ENST00000423222.5 ENST00000610948.1 ENST00000653287.1 ENST00000653498.1 ENST00000653721.1 ENST00000654699.1 ENST00000654903.1 ENST00000656082.1 ENST00000656886.1 ENST00000660130.1 ENST00000661331.1 ENST00000662549.1 ENST00000666134.1 ENST00000667464.1 ENST00000670353.1 |
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| CDS TCA 90 bp | GTGCTGGGCTCCGCATCCTTCTTTGGCCGCCTTACACCAAAACGCTaGGCTTGGAAATCAAAAGGGTCAGCCCAGTTTCAGTCCCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: VLGSASFFGRLTPKR*AWKSKGSAQFQSLG Trigger: TCCAAGGGACTGAAACTGGGCTGACCCTTTTGATTTCCAAGCTCAGCGTTTTGGTGTAAGGCGGCCAAAGAAGGATGCGGAGCCCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657539.1 |
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| CDS GCA 90 bp | TTGTCCTCTTCCTCTCTCTCTTGCCTTCTCTCTCACCATGAGATCTaGAGTTGCAGGCGCCCCTTCACCTTCTGCCATGAGTGGAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LSSSSLSCLLSHHEI*SCRRPFTFCHEWKQ Trigger: CTGCTTCCACTCATGGCAGAAGGTGAAGGGGCGCCTGCAACTGCAGATCTCATGGTGAGAGAGAAGGCAAGAGAGAGAGGAAGAGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653721.1 ENST00000654903.1 |
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| CDS CCA 90 bp | CTGCATTTCCAACTGAGGTACGAGGTTCATCTCACAGGGGAGTGCTaGACAGTTGGTGCAGGACAGTGGGTTCAGTGCACTGAGCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: LHFQLRYEVHLTGEC*TVGAGQWVQCTELE Trigger: CTCAAGCTCAGTGCACTGAACCCACTGTCCTGCACCAACTGTCCAGCACTCCCCTGTGAGATGAACCTCGTACCTCAGTTGGAAATGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663427.1 |
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| CDS TCA 90 bp | CAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACACAGAAGACAGGTaGTTTCTGCATTTCCAACTGAGGTACGAGGTTCATCTCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QLQSTAPSVSDTEDR*FLHFQLRYEVHLTG Trigger: CCCTGTGAGATGAACCTCGTACCTCAGTTGGAAATGCAGAAATCACCTGTCTTCTGTGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663427.1 |
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| CDS TCA 90 bp | GTGCTGGGCTCCGCATCCTTCTTTGGCCGCCTTACACCAAAACGCTaGGCTTGGAAATCAAAAGGGTCAGCCCAGTTTCAGTCCCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: VLGSASFFGRLTPKR*AWKSKGSAQFQSLF Trigger: AAAGAGGGACTGAAACTGGGCTGACCCTTTTGATTTCCAAGCTCAGCGTTTTGGTGTAAGGCGGCCAAAGAAGGATGCGGAGCCCAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000659698.1 ENST00000665802.1 |
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| CDS GCA 90 bp | TATTTTGTCCATGAGATCTGCAGTTGCAGGCGCCCCTTCACCTTCTaGCATGAGTGGAAGCAGCCTCAGTCTCTTGCCAGAAGCAGATAC | + |
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Preference number: 5 (lower is better) Translates to: YFVHEICSCRRPFTF*HEWKQPQSLARSRY Trigger: GTATCTGCTTCTGGCAAGAGACTGAGGCTGCTTCCACTCATGGCAGAAGGTGAAGGGGCGCCTGCAACTGCAGATCTCATGGACAAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660130.1 |
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| CDS GCA 90 bp | TTTCTGCATTTCCAACTGAGGTACGAGGTTCATCTCACAGGGGAGTaGTGGACAGTTGGTGCAGGACAGTGGGTTCAGTGCACTGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: FLHFQLRYEVHLTGE*WTVGAGQWVQCTEL Trigger: AAGCTCAGTGCACTGAACCCACTGTCCTGCACCAACTGTCCAGCACTCCCCTGTGAGATGAACCTCGTACCTCAGTTGGAAATGCAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663427.1 |
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| CDS CCA 90 bp | GGCTGGAACGGTCACTTACTGGAAACTGCAGAGAAACAACCTGTTTaGTCCGACTTGACAACCTCAACCGGACCGAAGGTGCTGAACAAC | + |
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Preference number: 5 (lower is better) Translates to: GWNGHLLETAEKQPV*SDLTTSTGPKVLNN Trigger: GTTGTTCAGCACCTTCGGTCCGGTTGAGGTTGTCAAGTCGGACCAAACAGGTTGTTTCTCTGCAGTTTCCAGTAAGTGACCGTTCCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448567.2 |
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| CDS TCA 90 bp | GCTGAAGTGGGAGCATCATTTGAATCCAAGAGGTCTAGGCTGCAGTaGGCCATGATCATACTCTCACACTCCAGCCTAGGTAACACAGCC | + |
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Preference number: 5 (lower is better) Translates to: AEVGASFESKRSRLQ*AMIILSHSSLGNTA Trigger: GGCTGTGTTACCTAGGCTGGAGTGTGAGAGTATGATCATGGCTCACTGCAGCCTAGACCTCTTGGATTCAAATGATGCTCCCACTTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423222.5 |
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| CDS TCA 90 bp | TGGCTTCCTTCATATTTGCCAGCCCTGGCATCTTCAGGATTTCTGTaGGTGGACTTCTTATCCATGTCTATTAAACCTCCCTGCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: WLPSYLPALASSGFL*VDFLSMSIKPPCHV Trigger: AACATGGCAGGGAGGTTTAATAGACATGGATAAGAAGTCCACTCACAGAAATCCTGAAGATGCCAGGGCTGGCAAATATGAAGGAAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656886.1 |
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| CDS CCA 90 bp | AAATACTCATCTTTCGTAATGGAAACTGCAGAGAAACAACCTGTTTaGTCCGACTTGACAACCTCAACCGGACCGAAGGTGCTGAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: KYSSFVMETAEKQPV*SDLTTSTGPKVLNN Trigger: GTTGTTCAGCACCTTCGGTCCGGTTGAGGTTGTCAAGTCGGACCAAACAGGTTGTTTCTCTGCAGTTTCCATTACGAAAGATGAGTATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659698.1 ENST00000660843.1 ENST00000666134.1 |
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| CDS TCA 90 bp | TGTTTACCTTCATATTTGCCAGCCCTGGCATCTTCAGGATTTCTGTaGGTGGACTTCTTATCCATGTCTATTAAACCTCCCTGCCATGTC | + |
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Preference number: 5 (lower is better) Translates to: CLPSYLPALASSGFL*VDFLSMSIKPPCHV Trigger: GACATGGCAGGGAGGTTTAATAGACATGGATAAGAAGTCCACTCACAGAAATCCTGAAGATGCCAGGGCTGGCAAATATGAAGGTAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653498.1 ENST00000663693.1 |
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| CDS TCA 90 bp | GGATCATCTTCATATTTGCCAGCCCTGGCATCTTCAGGATTTCTGTaGGTGGACTTCTTATCCATGTCTATTAAACCTCCCTGCCATGTT | + |
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Preference number: 5 (lower is better) Translates to: GSSSYLPALASSGFL*VDFLSMSIKPPCHV Trigger: AACATGGCAGGGAGGTTTAATAGACATGGATAAGAAGTCCACTCACAGAAATCCTGAAGATGCCAGGGCTGGCAAATATGAAGATGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661331.1 |
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| CDS CCA 90 bp | TACCTTCATATTTGCCAGCCCTGGCATCTTCAGGATTTCTGTGAGTaGACTTCTTATCCATGTCTATTAAACCTCCCTGCCATGTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: YLHICQPWHLQDFCE*TSYPCLLNLPAMLE Trigger: TTCCAACATGGCAGGGAGGTTTAATAGACATGGATAAGAAGTCCACTCACAGAAATCCTGAAGATGCCAGGGCTGGCAAATATGAAGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000423222.5 ENST00000534914.6 ENST00000653721.1 ENST00000654699.1 ENST00000656082.1 ENST00000657539.1 ENST00000660130.1 ENST00000662409.1 ENST00000662549.1 ENST00000663427.1 ENST00000664255.1 ENST00000665802.1 ENST00000667464.1 ENST00000669618.1 ENST00000670353.1 |
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| CDS CCA 90 bp | TACCTTCATATTTGCCAGCCCTGGCATCTTCAGGATTTCTGTGAGTaGACTTCTTATCCATGTCTATTAAACCTCCCTGCCATGTCTGTA | + |
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Preference number: 5 (lower is better) Translates to: YLHICQPWHLQDFCE*TSYPCLLNLPAMSV Trigger: TACAGACATGGCAGGGAGGTTTAATAGACATGGATAAGAAGTCCACTCACAGAAATCCTGAAGATGCCAGGGCTGGCAAATATGAAGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653498.1 ENST00000663693.1 |
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| CDS CCA 90 bp | TTCCTTCATATTTGCCAGCCCTGGCATCTTCAGGATTTCTGTGAGTaGACTTCTTATCCATGTCTATTAAACCTCCCTGCCATGTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: FLHICQPWHLQDFCE*TSYPCLLNLPAMLE Trigger: TTCCAACATGGCAGGGAGGTTTAATAGACATGGATAAGAAGTCCACTCACAGAAATCCTGAAGATGCCAGGGCTGGCAAATATGAAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656886.1 |
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| CDS CCA 90 bp | CATCTTCATATTTGCCAGCCCTGGCATCTTCAGGATTTCTGTGAGTaGACTTCTTATCCATGTCTATTAAACCTCCCTGCCATGTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: HLHICQPWHLQDFCE*TSYPCLLNLPAMLE Trigger: TTCCAACATGGCAGGGAGGTTTAATAGACATGGATAAGAAGTCCACTCACAGAAATCCTGAAGATGCCAGGGCTGGCAAATATGAAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661331.1 |
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| CDS TCA 90 bp | TGTTTACCTTCATATTTGCCAGCCCTGGCATCTTCAGGATTTCTGTaGGTGGACTTCTTATCCATGTCTATTAAACCTCCCTGCCATGTT | + |
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Preference number: 5 (lower is better) Translates to: CLPSYLPALASSGFL*VDFLSMSIKPPCHV Trigger: AACATGGCAGGGAGGTTTAATAGACATGGATAAGAAGTCCACTCACAGAAATCCTGAAGATGCCAGGGCTGGCAAATATGAAGGTAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000423222.5 ENST00000534914.6 ENST00000653721.1 ENST00000654699.1 ENST00000656082.1 ENST00000657539.1 ENST00000660130.1 ENST00000662409.1 ENST00000662549.1 ENST00000663427.1 ENST00000664255.1 ENST00000665802.1 ENST00000667464.1 ENST00000669618.1 ENST00000670353.1 |
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| CDS TCA 90 bp | TGTTTACCTTCATATTTGCCAGCCCTGGCATCTTCAGGATTTCTGTaGGTGGACTTCTTATCCATGTCTATTAAACCTCCCTGCCATGTA | + |
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Preference number: 5 (lower is better) Translates to: CLPSYLPALASSGFL*VDFLSMSIKPPCHV Trigger: TACATGGCAGGGAGGTTTAATAGACATGGATAAGAAGTCCACTCACAGAAATCCTGAAGATGCCAGGGCTGGCAAATATGAAGGTAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000448567.2 ENST00000653287.1 ENST00000654903.1 ENST00000659698.1 ENST00000660843.1 ENST00000666134.1 |
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| CDS TCA 90 bp | TGCTGTCACTTGCAACAAGGGATGGAAATGGAGGTCATTGTTAAGTaGCAAAAGCCAGGCACAGAAAGACAAAATTCACATGTTGTCACC | + |
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Preference number: 5 (lower is better) Translates to: CCHLQQGMEMEVIVK*QKPGTERQNSHVVT Trigger: GGTGACAACATGTGAATTTTGTCTTTCTGTGCCTGGCTTTTGTCACTTAACAATGACCTCCATTTCCATCCCTTGTTGCAAGTGACAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000534914.6 ENST00000663693.1 ENST00000664255.1 |
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| CDS CCA 90 bp | GGTATTCTACAGAGGGTCTGTGTTACTTCAATACTTGAATCTGTCTaGCTTCCTGAAGACGATGATGAGGAAGAAGGAAACATAGGATCA | + |
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Preference number: 5 (lower is better) Translates to: GILQRVCVTSILESV*LPEDDDEEEGNIGS Trigger: TGATCCTATGTTTCCTTCTTCCTCATCATCGTCTTCAGGAAGCCAGACAGATTCAAGTATTGAAGTAACACAGACCCTCTGTAGAATACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000534914.6 ENST00000662549.1 ENST00000667464.1 |
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| CDS CCA 90 bp | GAAGCCACAAGGCTGAATGATACCACAAAAGGAAAACAGCACAAATaGAGTACTAAATACTCATCTTTCGTAACGGTTTGCCTTCACACT | + |
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Preference number: 5 (lower is better) Translates to: EATRLNDTTKGKQHK*STKYSSFVTVCLHT Trigger: AGTGTGAAGGCAAACCGTTACGAAAGATGAGTATTTAGTACTCCATTTGTGCTGTTTTCCTTTTGTGGTATCATTCAGCCTTGTGGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448567.2 |
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| CDS CCA 90 bp | GAAGCCACAAGGCTGAATGATACCACAAAAGGAAAACAGCACAAATaGAGTACTAAATACTCATCTTTCGTAACTGTAATCCCAGCACTT | + |
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Preference number: 5 (lower is better) Translates to: EATRLNDTTKGKQHK*STKYSSFVTVIPAL Trigger: AAGTGCTGGGATTACAGTTACGAAAGATGAGTATTTAGTACTCCATTTGTGCTGTTTTCCTTTTGTGGTATCATTCAGCCTTGTGGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653287.1 ENST00000654903.1 |
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| CDS TCA 90 bp | TTTACAGAGCATCTGAAGATTGGTTTCATGAGTCTGAACTTAGTGTaGAAGATGTTCAAATTCAAATCCCCAAGCCAGCGCATCAATGTT | + |
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Preference number: 5 (lower is better) Translates to: FTEHLKIGFMSLNLV*KMFKFKSPSQRINV Trigger: AACATTGATGCGCTGGCTTGGGGATTTGAATTTGAACATCTTTCACACTAAGTTCAGACTCATGAAACCAATCTTCAGATGCTCTGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 18 transcripts: ENST00000423222.5 ENST00000610948.1 ENST00000653287.1 ENST00000653498.1 ENST00000653721.1 ENST00000654699.1 ENST00000654903.1 ENST00000656082.1 ENST00000656886.1 ENST00000657539.1 ENST00000659698.1 ENST00000660130.1 ENST00000661331.1 ENST00000662549.1 ENST00000665802.1 ENST00000666134.1 ENST00000667464.1 ENST00000670353.1 |
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| CDS CCA 90 bp | ACGTTCCATGCTGAGAAAAAGAATTCAGCAACAATAGCCAAGATCTaGAAGCAATCTAAACGTCCATCAACAGATGAATGTGGTACAAAT | + |
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Preference number: 5 (lower is better) Translates to: TFHAEKKNSATIAKI*KQSKRPSTDECGTN Trigger: ATTTGTACCACATTCATCTGTTGATGGACGTTTAGATTGCTTCCAGATCTTGGCTATTGTTGCTGAATTCTTTTTCTCAGCATGGAACGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000534914.6 ENST00000663693.1 ENST00000664255.1 |
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| CDS CCA 90 bp | GAAGCCACAAGGCTGAATGATACCACAAAAGGAAAACAGCACAAATaGAGTACTAAATACTCATCTTTCGTAATGGAAACTGCAGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: EATRLNDTTKGKQHK*STKYSSFVMETAEK Trigger: TTTCTCTGCAGTTTCCATTACGAAAGATGAGTATTTAGTACTCCATTTGTGCTGTTTTCCTTTTGTGGTATCATTCAGCCTTGTGGCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000659698.1 ENST00000660843.1 ENST00000666134.1 |
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| CDS GCA 72 bp | ACAACCTCAACCGGACCGAAGGTGCTGAACAACCAGTaGGGCGAGCGCCGCGAAACCCAACGCCCGACCGCG | + |
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Preference number: 6 (lower is better) Translates to: TTSTGPKVLNNQ*GERRETQRPTA Trigger: CGCGGTCGGGCGTTGGGTTTCGCGGCGCTCGCCGCACTGGTTGTTCAGCACCTTCGGTCCGGTTGAGGTTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000423222.5 ENST00000534914.6 ENST00000654699.1 ENST00000660130.1 ENST00000661331.1 ENST00000662409.1 ENST00000662549.1 ENST00000663427.1 ENST00000663693.1 ENST00000664255.1 ENST00000665802.1 ENST00000666134.1 ENST00000667464.1 ENST00000669618.1 ENST00000670353.1 |
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| CDS CAA 72 bp | CAGTTGGTGCAGGACAGTGGGTTCAGTGCACTGAGCTaGAGCCGAAGCAGGGCGAGGCATCACCTAACCCGG | + |
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Preference number: 6 (lower is better) Translates to: QLVQDSGFSALS*SRSRARHHLTR Trigger: CCGGGTTAGGTGATGCCTCGCCCTGCTTCGGCTCAAGCTCAGTGCACTGAACCCACTGTCCTGCACCAACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663427.1 |
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| CDS CAA 90 bp | AGTGCTGGACAGTTGGTGCAGGACAGTGGGTTCAGTGCACTGAGCTaGAGCCGAAGCAGGGCGAGGCATCACCTAACCCGGGAAGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: SAGQLVQDSGFSALS*SRSRARHHLTREVQ Trigger: TTGAACTTCCCGGGTTAGGTGATGCCTCGCCCTGCTTCGGCTCAAGCTCAGTGCACTGAACCCACTGTCCTGCACCAACTGTCCAGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663427.1 |
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| CDS GCA 72 bp | CATGAGATCTGCAGTTGCAGGCGCCCCTTCACCTTCTaGCATGAGTGGAAGCAGCCTCAGTCTCTTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: HEICSCRRPFTF*HEWKQPQSLAR Trigger: TCTGGCAAGAGACTGAGGCTGCTTCCACTCATGGCAGAAGGTGAAGGGGCGCCTGCAACTGCAGATCTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653721.1 ENST00000654903.1 ENST00000660130.1 ENST00000670353.1 |
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| CDS CCA 72 bp | TGCAGTTGCAGGCGCCCCTTCACCTTCTGCCATGAGTaGAAGCAGCCTCAGTCTCTTGCCAGAAGCAGATAC | + |
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Preference number: 6 (lower is better) Translates to: CSCRRPFTFCHE*KQPQSLARSRY Trigger: GTATCTGCTTCTGGCAAGAGACTGAGGCTGCTTCCACTCATGGCAGAAGGTGAAGGGGCGCCTGCAACTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653721.1 ENST00000654903.1 ENST00000660130.1 ENST00000670353.1 |
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| CDS CAA 72 bp | GGTACGAGGTTCATCTCACAGGGGAGTGCTGGACAGTaGGTGCAGGACAGTGGGTTCAGTGCACTGAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: GTRFISQGSAGQ*VQDSGFSALSL Trigger: CAAGCTCAGTGCACTGAACCCACTGTCCTGCACCAACTGTCCAGCACTCCCCTGTGAGATGAACCTCGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663427.1 |
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| CDS CAA 90 bp | GGCGCCCCTTCACCTTCTGCCATGAGTGGAAGCAGCCTCAGTCTCTaGCCAGAAGCAGATACTGGCGCCATTCTTGTGCAGCCTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: GAPSPSAMSGSSLSL*PEADTGAILVQPFF Trigger: AAAGAAAGGCTGCACAAGAATGGCGCCAGTATCTGCTTCTGGCAAGAGACTGAGGCTGCTTCCACTCATGGCAGAAGGTGAAGGGGCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653721.1 ENST00000654903.1 ENST00000660130.1 ENST00000670353.1 |
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| CDS TCA 72 bp | GTCCTCTTCCTCTCTCTCTTGCCTTCTCTCTCACCATaGGATCTGCAGTTGCAGGCGCCCCTTCACCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: VLFLSLLPSLSP*DLQLQAPLHLL Trigger: CAGAAGGTGAAGGGGCGCCTGCAACTGCAGATCTCATGGTGAGAGAGAAGGCAAGAGAGAGAGGAAGAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653721.1 ENST00000654903.1 |
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| CDS GCA 72 bp | TCCTCTCTCTCTTGCCTTCTCTCTCACCATGAGATCTaGAGTTGCAGGCGCCCCTTCACCTTCTGCCATGAG | + |
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Preference number: 6 (lower is better) Translates to: SSLSCLLSHHEI*SCRRPFTFCHE Trigger: CTCATGGCAGAAGGTGAAGGGGCGCCTGCAACTGCAGATCTCATGGTGAGAGAGAAGGCAAGAGAGAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653721.1 ENST00000654903.1 ENST00000670353.1 |
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| CDS GCA 72 bp | TTCCAACTGAGGTACGAGGTTCATCTCACAGGGGAGTaGTGGACAGTTGGTGCAGGACAGTGGGTTCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: FQLRYEVHLTGE*WTVGAGQWVQC Trigger: GCACTGAACCCACTGTCCTGCACCAACTGTCCAGCACTCCCCTGTGAGATGAACCTCGTACCTCAGTTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663427.1 |
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| CDS CCA 72 bp | CAACTGAGGTACGAGGTTCATCTCACAGGGGAGTGCTaGACAGTTGGTGCAGGACAGTGGGTTCAGTGCACT | + |
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Preference number: 6 (lower is better) Translates to: QLRYEVHLTGEC*TVGAGQWVQCT Trigger: AGTGCACTGAACCCACTGTCCTGCACCAACTGTCCAGCACTCCCCTGTGAGATGAACCTCGTACCTCAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663427.1 |
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| CDS TCA 72 bp | CCCAGCACTTTGGGATGCCGTGGGGAACAGATAACCTaGGGTCAGGAGTTCGAGAGCAGCCTGGACAAAATA | + |
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Preference number: 6 (lower is better) Translates to: PSTLGCRGEQIT*GQEFESSLDKI Trigger: TATTTTGTCCAGGCTGCTCTCGAACTCCTGACCTCAGGTTATCTGTTCCCCACGGCATCCCAAAGTGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000423222.5 ENST00000661331.1 |
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| CDS TCA 72 bp | TACCTCTTCCTCTCTCTCTTGCCTTCTCTCTCACCATaGGATCTGCAGTTGCAGGCGCCCCTTCACCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: YLFLSLLPSLSP*DLQLQAPLHLL Trigger: CAGAAGGTGAAGGGGCGCCTGCAACTGCAGATCTCATGGTGAGAGAGAAGGCAAGAGAGAGAGGAAGAGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670353.1 |
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| CDS CCA 72 bp | TGTAGGCTTCACAGTGCTGGGCTCCGCATCCTTCTTTaGCCGCCTTACACCAAAACGCTGAGCTTGGAAATC | + |
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Preference number: 6 (lower is better) Translates to: CRLHSAGLRILL*PPYTKTLSLEI Trigger: GATTTCCAAGCTCAGCGTTTTGGTGTAAGGCGGCCAAAGAAGGATGCGGAGCCCAGCACTGTGAAGCCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 18 transcripts: ENST00000423222.5 ENST00000610948.1 ENST00000653287.1 ENST00000653498.1 ENST00000653721.1 ENST00000654699.1 ENST00000654903.1 ENST00000656082.1 ENST00000656886.1 ENST00000657539.1 ENST00000659698.1 ENST00000660130.1 ENST00000661331.1 ENST00000662549.1 ENST00000665802.1 ENST00000666134.1 ENST00000667464.1 ENST00000670353.1 |
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| CDS CAA 72 bp | TCACCTTCTGCCATGAGTGGAAGCAGCCTCAGTCTCTaGCCAGAAGCAGATACTGGCGCCATTCTTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SPSAMSGSSLSL*PEADTGAILVQ Trigger: CTGCACAAGAATGGCGCCAGTATCTGCTTCTGGCAAGAGACTGAGGCTGCTTCCACTCATGGCAGAAGGTGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000653721.1 ENST00000654903.1 ENST00000660130.1 ENST00000670353.1 |
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| CDS CAA 90 bp | GGGCTCCGCATCCTTCTTTGGCCGCCTTACACCAAAACGCTGAGCTaGGAAATCAAAAGGGTCAGCCCAGTTTCAGTCCCTCTTGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GLRILLWPPYTKTLS*EIKRVSPVSVPLGK Trigger: CTTTCCAAGAGGGACTGAAACTGGGCTGACCCTTTTGATTTCCAAGCTCAGCGTTTTGGTGTAAGGCGGCCAAAGAAGGATGCGGAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 15 transcripts: ENST00000423222.5 ENST00000610948.1 ENST00000653287.1 ENST00000653498.1 ENST00000653721.1 ENST00000654699.1 ENST00000654903.1 ENST00000656082.1 ENST00000656886.1 ENST00000660130.1 ENST00000661331.1 ENST00000662549.1 ENST00000666134.1 ENST00000667464.1 ENST00000670353.1 |
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| CDS CAA 90 bp | GGGCTCCGCATCCTTCTTTGGCCGCCTTACACCAAAACGCTGAGCTaGGAAATCAAAAGGGTCAGCCCAGTTTCAGTCCCTTGGAAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GLRILLWPPYTKTLS*EIKRVSPVSVPWKG Trigger: ACCTTTCCAAGGGACTGAAACTGGGCTGACCCTTTTGATTTCCAAGCTCAGCGTTTTGGTGTAAGGCGGCCAAAGAAGGATGCGGAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657539.1 |
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| CDS CCA 72 bp | GACCCTGTCTTGGAAACTGCAGAGAAACAACCTGTTTaGTCCGACTTGACAACCTCAACCGGACCGAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: DPVLETAEKQPV*SDLTTSTGPKV Trigger: CACCTTCGGTCCGGTTGAGGTTGTCAAGTCGGACCAAACAGGTTGTTTCTCTGCAGTTTCCAAGACAGGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653287.1 ENST00000653498.1 ENST00000663693.1 |
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| CDS CAA 90 bp | CGGCTGGAACGGTCACTTACTGGAAACTGCAGAGAAACAACCTGTTaGGTCCGACTTGACAACCTCAACCGGACCGAAGGTGCTGAACAA | + |
|
Preference number: 6 (lower is better) Translates to: RLERSLTGNCRETTC*VRLDNLNRTEGAEQ Trigger: TTGTTCAGCACCTTCGGTCCGGTTGAGGTTGTCAAGTCGGACCAAACAGGTTGTTTCTCTGCAGTTTCCAGTAAGTGACCGTTCCAGCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448567.2 |
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| CDS CAA 90 bp | GGGCTCCGCATCCTTCTTTGGCCGCCTTACACCAAAACGCTGAGCTaGGAAATCAAAAGGGTCAGCCCAGTTTCAGTCCCTCTTTGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GLRILLWPPYTKTLS*EIKRVSPVSVPLCN Trigger: ATTGCAAAGAGGGACTGAAACTGGGCTGACCCTTTTGATTTCCAAGCTCAGCGTTTTGGTGTAAGGCGGCCAAAGAAGGATGCGGAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000659698.1 ENST00000665802.1 |
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| CDS CCA 72 bp | GGTCACTTACTGGAAACTGCAGAGAAACAACCTGTTTaGTCCGACTTGACAACCTCAACCGGACCGAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GHLLETAEKQPV*SDLTTSTGPKV Trigger: CACCTTCGGTCCGGTTGAGGTTGTCAAGTCGGACCAAACAGGTTGTTTCTCTGCAGTTTCCAGTAAGTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448567.2 |
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| CDS CAA 72 bp | CGGTCACTTACTGGAAACTGCAGAGAAACAACCTGTTaGGTCCGACTTGACAACCTCAACCGGACCGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RSLTGNCRETTC*VRLDNLNRTEG Trigger: ACCTTCGGTCCGGTTGAGGTTGTCAAGTCGGACCAAACAGGTTGTTTCTCTGCAGTTTCCAGTAAGTGACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448567.2 |
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| CDS CAA 72 bp | AGACCCTGTCTTGGAAACTGCAGAGAAACAACCTGTTaGGTCCGACTTGACAACCTCAACCGGACCGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RPCLGNCRETTC*VRLDNLNRTEG Trigger: ACCTTCGGTCCGGTTGAGGTTGTCAAGTCGGACCAAACAGGTTGTTTCTCTGCAGTTTCCAAGACAGGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653287.1 ENST00000653498.1 ENST00000663693.1 |
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| CDS TCA 72 bp | TCTACAGCTCCCAGCGTGAGCGACACAGAAGACAGGTaGTTTCTGCATTTCCAACTGAGGTACGAGGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: STAPSVSDTEDR*FLHFQLRYEVH Trigger: ATGAACCTCGTACCTCAGTTGGAAATGCAGAAATCACCTGTCTTCTGTGTCGCTCACGCTGGGAGCTGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663427.1 |
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| CDS GCA 72 bp | CTTGGTGTTTCATATTTTGTCCATGAGATCTGCAGTTaGAGGCGCCCCTTCACCTTCTGCCATGAGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LGVSYFVHEICS*RRPFTFCHEWK Trigger: CTTCCACTCATGGCAGAAGGTGAAGGGGCGCCTGCAACTGCAGATCTCATGGACAAAATATGAAACACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660130.1 |
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| CDS GCA 72 bp | TTGTTGAAAGAGCCTGGTACCTCTTCCTCTCTCTCTTaGCTTCTCTCTCACCATGAGATCTGCAGTTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LLKEPGTSSSLS*LLSHHEICSCR Trigger: CCTGCAACTGCAGATCTCATGGTGAGAGAGAAGGCAAGAGAGAGAGGAAGAGGTACCAGGCTCTTTCAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670353.1 |
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| CDS CAA 72 bp | ATCCTTCTTTGGCCGCCTTACACCAAAACGCTGAGCTaGGAAATCAAAAGGGTCAGCCCAGTTTCAGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: ILLWPPYTKTLS*EIKRVSPVSVP Trigger: AGGGACTGAAACTGGGCTGACCCTTTTGATTTCCAAGCTCAGCGTTTTGGTGTAAGGCGGCCAAAGAAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 18 transcripts: ENST00000423222.5 ENST00000610948.1 ENST00000653287.1 ENST00000653498.1 ENST00000653721.1 ENST00000654699.1 ENST00000654903.1 ENST00000656082.1 ENST00000656886.1 ENST00000657539.1 ENST00000659698.1 ENST00000660130.1 ENST00000661331.1 ENST00000662549.1 ENST00000665802.1 ENST00000666134.1 ENST00000667464.1 ENST00000670353.1 |
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| CDS CAA 90 bp | AACATAGTGAGACCCTGTCTTGGAAACTGCAGAGAAACAACCTGTTaGGTCCGACTTGACAACCTCAACCGGACCGAAGGTGCTGAACAA | + |
|
Preference number: 6 (lower is better) Translates to: NIVRPCLGNCRETTC*VRLDNLNRTEGAEQ Trigger: TTGTTCAGCACCTTCGGTCCGGTTGAGGTTGTCAAGTCGGACCAAACAGGTTGTTTCTCTGCAGTTTCCAAGACAGGGTCTCACTATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653287.1 ENST00000653498.1 ENST00000663693.1 |
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| CDS GCA 72 bp | AAATGGAGTACTAAATACTCATCTTTCGTAACGGTTTaGCTTCACACTCTAGCCACAGCCCCGGCTGGAACG | + |
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Preference number: 6 (lower is better) Translates to: KWSTKYSSFVTV*LHTLATAPAGT Trigger: CGTTCCAGCCGGGGCTGTGGCTAGAGTGTGAAGGCAAACCGTTACGAAAGATGAGTATTTAGTACTCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448567.2 |
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| CDS CCA 72 bp | TCTTTCGTAATGGAAACTGCAGAGAAACAACCTGTTTaGTCCGACTTGACAACCTCAACCGGACCGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: SFVMETAEKQPV*SDLTTSTGPKV Trigger: CACCTTCGGTCCGGTTGAGGTTGTCAAGTCGGACCAAACAGGTTGTTTCTCTGCAGTTTCCATTACGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659698.1 ENST00000660843.1 ENST00000666134.1 |
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| CDS CCA 72 bp | ATTTGCCAGCCCTGGCATCTTCAGGATTTCTGTGAGTaGACTTCTTATCCATGTCTATTAAACCTCCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: ICQPWHLQDFCE*TSYPCLLNLPA Trigger: GGCAGGGAGGTTTAATAGACATGGATAAGAAGTCCACTCACAGAAATCCTGAAGATGCCAGGGCTGGCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 25 transcripts: ENST00000423222.5 ENST00000448567.2 ENST00000534914.6 ENST00000653287.1 ENST00000653498.1 ENST00000653721.1 ENST00000654699.1 ENST00000654903.1 ENST00000656082.1 ENST00000656886.1 ENST00000657539.1 ENST00000659698.1 ENST00000660130.1 ENST00000660843.1 ENST00000661331.1 ENST00000662409.1 ENST00000662549.1 ENST00000663427.1 ENST00000663693.1 ENST00000664255.1 ENST00000665802.1 ENST00000666134.1 ENST00000667464.1 ENST00000669618.1 ENST00000670353.1 |
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| CDS CAA 72 bp | TCTTGGTGTTTCATATTTTGTCCACTCGTCGGGGAGTaGAACACGCTTATCTGTGGACCAAGCCGATTGATG | + |
|
Preference number: 6 (lower is better) Translates to: SWCFIFCPLVGE*NTLICGPSRLM Trigger: CATCAATCGGCTTGGTCCACAGATAAGCGTGTTCAACTCCCCGACGAGTGGACAAAATATGAAACACCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000610948.1 ENST00000654699.1 ENST00000667464.1 |
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| CDS CAA 72 bp | ATCTTTCGTAATGGAAACTGCAGAGAAACAACCTGTTaGGTCCGACTTGACAACCTCAACCGGACCGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: IFRNGNCRETTC*VRLDNLNRTEG Trigger: ACCTTCGGTCCGGTTGAGGTTGTCAAGTCGGACCAAACAGGTTGTTTCTCTGCAGTTTCCATTACGAAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659698.1 ENST00000660843.1 ENST00000666134.1 |
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| CDS TCA 72 bp | AAAAGTAGGCTAGAATTGCCACAACTGGCTTGGACTTaGGGCTCTCAAGTTTTGCACGTGGGCCTTCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: KSRLELPQLAWT*GSQVLHVGLQK Trigger: TTTTTGAAGGCCCACGTGCAAAACTTGAGAGCCTCAAGTCCAAGCCAGTTGTGGCAATTCTAGCCTACTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000423222.5 ENST00000661331.1 |
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| CDS CAA 90 bp | TATCCCTCCTGGGTATTCTACAGAGGGTCTGTGTTACTTCAATACTaGAATCTGTCTGGCTTCCTGAAGACGATGATGAGGAAGAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: YPSWVFYRGSVLLQY*NLSGFLKTMMRKKE Trigger: TTCCTTCTTCCTCATCATCGTCTTCAGGAAGCCAGACAGATTCAAGTATTGAAGTAACACAGACCCTCTGTAGAATACCCAGGAGGGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000534914.6 ENST00000662549.1 ENST00000667464.1 |
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| CDS CCA 72 bp | TTTCCCTTGGCAGCATCTTCAATACTTGAATCTGTCTaGCTTCCTGAAGACGATGATGAGGAAGAAGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: FPLAASSILESV*LPEDDDEEEGN Trigger: GTTTCCTTCTTCCTCATCATCGTCTTCAGGAAGCCAGACAGATTCAAGTATTGAAGATGCTGCCAAGGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000423222.5 ENST00000653287.1 ENST00000653498.1 ENST00000653721.1 ENST00000654699.1 ENST00000654903.1 ENST00000656082.1 ENST00000657539.1 ENST00000659698.1 ENST00000660130.1 ENST00000660843.1 ENST00000661331.1 ENST00000662409.1 ENST00000663427.1 ENST00000663693.1 ENST00000664255.1 ENST00000665802.1 ENST00000666134.1 ENST00000669618.1 ENST00000670353.1 |
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| CDS CCA 72 bp | CAGAGGGTCTGTGTTACTTCAATACTTGAATCTGTCTaGCTTCCTGAAGACGATGATGAGGAAGAAGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: QRVCVTSILESV*LPEDDDEEEGN Trigger: GTTTCCTTCTTCCTCATCATCGTCTTCAGGAAGCCAGACAGATTCAAGTATTGAAGTAACACAGACCCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000534914.6 ENST00000662549.1 ENST00000667464.1 |
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| CDS CCA 72 bp | TCATATTTTGTCCTAGAACTGGTTGTTGAAAGAGCCTaGTACCTCTTCCTCTCTCTCTTGCCTTCTCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SYFVLELVVERA*YLFLSLLPSLS Trigger: TGAGAGAGAAGGCAAGAGAGAGAGGAAGAGGTACCAGGCTCTTTCAACAACCAGTTCTAGGACAAAATATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670353.1 |
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| CDS CAA 72 bp | TGGGTATTCTACAGAGGGTCTGTGTTACTTCAATACTaGAATCTGTCTGGCTTCCTGAAGACGATGATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: WVFYRGSVLLQY*NLSGFLKTMMR Trigger: CCTCATCATCGTCTTCAGGAAGCCAGACAGATTCAAGTATTGAAGTAACACAGACCCTCTGTAGAATACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000534914.6 ENST00000662549.1 ENST00000667464.1 |
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| CDS CAA 72 bp | AGATCACAGGACCACAGGACCGAGGCGAAATTAAAATaGCTAATGAAGTTTTGGGCACCACTGTCATTGATA | + |
|
Preference number: 6 (lower is better) Translates to: RSQDHRTEAKLK*LMKFWAPLSLI Trigger: TATCAATGACAGTGGTGCCCAAAACTTCATTAGCAATTTTAATTTCGCCTCGGTCCTGTGGTCCTGTGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000534914.6 ENST00000663693.1 ENST00000664255.1 |
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| CDS TCA 72 bp | TTGCAACAAGGGATGGAAATGGAGGTCATTGTTAAGTaGCAAAAGCCAGGCACAGAAAGACAAAATTCACAT | + |
|
Preference number: 6 (lower is better) Translates to: LQQGMEMEVIVK*QKPGTERQNSH Trigger: ATGTGAATTTTGTCTTTCTGTGCCTGGCTTTTGTCACTTAACAATGACCTCCATTTCCATCCCTTGTTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000534914.6 ENST00000663693.1 ENST00000664255.1 |
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| CDS TCA 72 bp | GGTTTTACCCGTCTGCATAGTTTTCTGAGAAGTATTTaGAAAGCAGCAAAGGACACTATAAGCTTAGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: GFTRLHSFLRSI*KAAKDTISLAP Trigger: TGGTGCTAAGCTTATAGTGTCCTTTGCTGCTTTTCAAATACTTCTCAGAAAACTATGCAGACGGGTAAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662409.1 |
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| CDS CCA 72 bp | AGGACCGAGGCGAAATTAAAATTGCTAATGAAGTTTTaGGCACCACTGTCATTGATAACATCTTATCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RTEAKLKLLMKF*APLSLITSYQE Trigger: CTCCTGATAAGATGTTATCAATGACAGTGGTGCCCAAAACTTCATTAGCAATTTTAATTTCGCCTCGGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000534914.6 ENST00000663693.1 ENST00000664255.1 |
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| CDS CAA 72 bp | CAGGACCGAGGCGAAATTAAAATTGCTAATGAAGTTTaGGGCACCACTGTCATTGATAACATCTTATCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: QDRGEIKIANEV*GTTVIDNILSG Trigger: TCCTGATAAGATGTTATCAATGACAGTGGTGCCCAAAACTTCATTAGCAATTTTAATTTCGCCTCGGTCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000534914.6 ENST00000663693.1 ENST00000664255.1 |
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| CDS CCA 72 bp | GCTGAGAAAAAGAATTCAGCAACAATAGCCAAGATCTaGAAGCAATCTAAACGTCCATCAACAGATGAATGT | + |
|
Preference number: 6 (lower is better) Translates to: AEKKNSATIAKI*KQSKRPSTDEC Trigger: ACATTCATCTGTTGATGGACGTTTAGATTGCTTCCAGATCTTGGCTATTGTTGCTGAATTCTTTTTCTCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000534914.6 ENST00000663693.1 ENST00000664255.1 |
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