Pregenerated sensors for LINC00466 (Homo sapiens)
Ensembl gene IDs: ENSG00000224209Ensembl transcript IDs: ENST00000432537.2, ENST00000436475.3, ENST00000447183.3, ENST00000455304.6, ENST00000634576.1, ENST00000634725.1, ENST00000635218.1, ENST00000635458.1, ENST00000635555.1, ENST00000653027.1, ENST00000655035.1, ENST00000656034.1, ENST00000656075.1, ENST00000656229.1, ENST00000658104.1, ENST00000658184.1, ENST00000658957.1, ENST00000660198.1, ENST00000662017.1, ENST00000662911.1, ENST00000663270.1, ENST00000664269.1, ENST00000665381.1, ENST00000666431.1, ENST00000666885.1, ENST00000667005.1, ENST00000667523.1, ENST00000667879.1, ENST00000667957.1, ENST00000669810.1, ENST00000671553.1, ENST00000671620.1
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCGGGCGTCTCCGGAGACCGAAGCGCCGGAGGACCCGAGGAGGTCTaGCCCGCGCGCTGCTCTGGAGACTCCCGGGGCGGGTGGCGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PGVSGDRSAGGPEEV*PARCSGDSRGGWRS Trigger: CGAGCGCCACCCGCCCCGGGAGTCTCCAGAGCAGCGCGCGGGGCAGACCTCCTCGGGTCCTCCGGCGCTTCGGTCTCCGGAGACGCCCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000635218.1 ENST00000653027.1 ENST00000656229.1 ENST00000663270.1 |
||
| CDS GCA 90 bp | GGAGACCGAAGCGCCGGAGGACCCGAGGAGGTCTGCCCCGCGCGCTaGTCTGGAGACTCCCGGGGCGGGTGGCGCTCGGCCTTTCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GDRSAGGPEEVCPAR*SGDSRGGWRSAFPL Trigger: GAGCGGAAAGGCCGAGCGCCACCCGCCCCGGGAGTCTCCAGAGCAGCGCGCGGGGCAGACCTCCTCGGGTCCTCCGGCGCTTCGGTCTCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000635218.1 ENST00000653027.1 ENST00000656229.1 ENST00000663270.1 |
||
| CDS CCA 90 bp | CCGAAGCGCCGGAGGACCCGAGGAGGTCTGCCCCGCGCGCTGCTCTaGAGACTCCCGGGGCGGGTGGCGCTCGGCCTTTCCGCTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PKRRRTRGGLPRALL*RLPGRVALGLSAPF Trigger: GAAGGGAGCGGAAAGGCCGAGCGCCACCCGCCCCGGGAGTCTCCAGAGCAGCGCGCGGGGCAGACCTCCTCGGGTCCTCCGGCGCTTCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000635218.1 ENST00000653027.1 ENST00000656229.1 ENST00000663270.1 |
||
| CDS CCA 90 bp | CCTGAGACACAGAGTGAGACCCTGGACGTAACAAGACGGAAGGGCTaGGCGCTGAGGTCCTGCCAGCCCGGCCGCCAGAGGGAGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PETQSETLDVTRRKG*ALRSCQPGRQRELS Trigger: GCTCAGCTCCCTCTGGCGGCCGGGCTGGCAGGACCTCAGCGCCCAGCCCTTCCGTCTTGTTACGTCCAGGGTCTCACTCTGTGTCTCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000436475.3 ENST00000634725.1 ENST00000635218.1 ENST00000635458.1 ENST00000653027.1 ENST00000656229.1 ENST00000658184.1 ENST00000658957.1 ENST00000660198.1 ENST00000662911.1 ENST00000663270.1 ENST00000664269.1 ENST00000667005.1 ENST00000671620.1 |
||
| CDS GCA 90 bp | CTAGTTAGTAGATGCTGCCGGGCATGTGGAGCCGCCAAATCCAGATaGTACCCACAGAGGCTCTCCAGGCAGTTAGGGAATCACGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LVSRCCRACGAAKSR*YPQRLSRQLGNHGV Trigger: TACTCCGTGATTCCCTAACTGCCTGGAGAGCCTCTGTGGGTAGCATCTGGATTTGGCGGCTCCACATGCCCGGCAGCATCTACTAACTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000634576.1 ENST00000655035.1 ENST00000671620.1 |
||
| CDS CCA 90 bp | TGCAGGCTCTGCAAAGGTTCTGTCTCTGTAAGGCCACAGGGTAAATaGATAGAACGTGGGCCAGGCTTCTTTCCAGGCTCAGGCGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CRLCKGSVSVRPQGK*IERGPGFFPGSGVW Trigger: CCAGACGCCTGAGCCTGGAAAGAAGCCTGGCCCACGTTCTATCCATTTACCCTGTGGCCTTACAGAGACAGAACCTTTGCAGAGCCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662017.1 ENST00000666431.1 |
||
| CDS CCA 90 bp | CTTCCCAGCCTGTCCATTCTGGGGGTGACCTTTCCACCAGGTCCCTaGCATAAGGCAGTGTGTCTCCTGGAGCAAAGCCAGAATGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPSLSILGVTFPPGP*HKAVCLLEQSQNVR Trigger: TCTTACATTCTGGCTTTGCTCCAGGAGACACACTGCCTTATGCCAGGGACCTGGTGGAAAGGTCACCCCCAGAATGGACAGGCTGGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000656034.1 ENST00000658957.1 |
||
| CDS GCA 90 bp | ATCACTGGTGAACAGGCTACCTCATTAATCCTAGTTAGTAGATGCTaGCGGGCATGTGGAGCCGCCAAATCCAGATGCTACCCACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ITGEQATSLILVSRC*RACGAAKSRCYPQR Trigger: CCTCTGTGGGTAGCATCTGGATTTGGCGGCTCCACATGCCCGGCAGCATCTACTAACTAGGATTAATGAGGTAGCCTGTTCACCAGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000634576.1 ENST00000655035.1 ENST00000671620.1 |
||
| CDS GCA 90 bp | TGGATCACTGGTGAACAGGCTACCTCATTAATCCTAGTTAGTAGATaGTGCCGGGCATGTGGAGCCGCCAAATCCAGATGCTACCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: WITGEQATSLILVSR*CRACGAAKSRCYPQ Trigger: CTGTGGGTAGCATCTGGATTTGGCGGCTCCACATGCCCGGCAGCATCTACTAACTAGGATTAATGAGGTAGCCTGTTCACCAGTGATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000634576.1 ENST00000655035.1 ENST00000671620.1 |
||
| CDS TCA 90 bp | AAGATGGCGCTTGAAGAAATGCAGTTAAGGACTTACACTGTTAAGTaGGCTCTTCCCAGCCTGTCCATTCTGGGGGTGACCTTTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: KMALEEMQLRTYTVK*ALPSLSILGVTFPP Trigger: TGGTGGAAAGGTCACCCCCAGAATGGACAGGCTGGGAAGAGCTCACTTAACAGTGTAAGTCCTTAACTGCATTTCTTCAAGCGCCATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658957.1 |
||
| CDS GCA 90 bp | GCAGCTAAGCCAATTGTAGCTGCATTCACAGGTGACCGTGCTGTCTaGCTGCCTTCCCAGAGATACAAGAAACAAAACCAAACTGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: AAKPIVAAFTGDRAV*LPSQRYKKQNQTDR Trigger: TCTATCAGTTTGGTTTTGTTTCTTGTATCTCTGGGAAGGCAGGCAGACAGCACGGTCACCTGTGAATGCAGCTACAATTGGCTTAGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 21 transcripts: ENST00000455304.6 ENST00000634576.1 ENST00000634725.1 ENST00000635218.1 ENST00000635458.1 ENST00000635555.1 ENST00000653027.1 ENST00000655035.1 ENST00000656229.1 ENST00000658104.1 ENST00000658184.1 ENST00000660198.1 ENST00000662017.1 ENST00000662911.1 ENST00000663270.1 ENST00000665381.1 ENST00000666431.1 ENST00000666885.1 ENST00000667005.1 ENST00000667957.1 ENST00000671620.1 |
||
| CDS GCA 90 bp | CACAGCAGCCAGATCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTGTGCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HSSQILIGGKFMLPN*RFLHSRLGVVVCIC Trigger: ACAGATGCACACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGATCTGGCTGCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000634576.1 ENST00000653027.1 ENST00000655035.1 ENST00000660198.1 ENST00000662911.1 ENST00000665381.1 ENST00000666885.1 ENST00000667005.1 |
||
| CDS GCA 90 bp | TTCAGCCAACCACGAAAGGGAACAGTAAAAGCACAGTGCAGGCTCTaGAAAGGTTCTGTCTCTGTAAGGCCACAGGGTAAATGGATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FSQPRKGTVKAQCRL*KGSVSVRPQGKWIE Trigger: TTCTATCCATTTACCCTGTGGCCTTACAGAGACAGAACCTTTGCAGAGCCTGCACTGTGCTTTTACTGTTCCCTTTCGTGGTTGGCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662017.1 ENST00000666431.1 |
||
| CDS CCA 90 bp | TGGCTACTCAAAGTAAGAATCCCAGCTTTACTGATCCAGAAATTCTaGGGGTGTGGCCCAGCAATACGTGTTTTCACAAGCCTTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: WLLKVRIPALLIQKF*GCGPAIRVFTSLPG Trigger: ACCTGGAAGGCTTGTGAAAACACGTATTGCTGGGCCACACCCCCAGAATTTCTGGATCAGTAAAGCTGGGATTCTTACTTTGAGTAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000635218.1 ENST00000635458.1 ENST00000653027.1 ENST00000655035.1 ENST00000658104.1 ENST00000660198.1 ENST00000662911.1 ENST00000663270.1 ENST00000664269.1 ENST00000666431.1 ENST00000666885.1 ENST00000667005.1 ENST00000667879.1 ENST00000671620.1 |
||
| CDS GCA 90 bp | ACCTCTTCTGCTGTCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTGTGCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TSSAVLIGGKFMLPN*RFLHSRLGVVVCIC Trigger: ACAGATGCACACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGACAGCAGAAGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671620.1 |
||
| CDS CCA 90 bp | CATAGAAAGTTAACTCAGAAGCCAGCTTTACTGATCCAGAAATTCTaGGGGTGTGGCCCAGCAATACGTGTTTTCACAAGCCTTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: HRKLTQKPALLIQKF*GCGPAIRVFTSLPG Trigger: ACCTGGAAGGCTTGTGAAAACACGTATTGCTGGGCCACACCCCCAGAATTTCTGGATCAGTAAAGCTGGCTTCTGAGTTAACTTTCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634576.1 |
||
| CDS TCA 90 bp | CCCCTCTGTGACATCAAACCTCAGCTCTGCTCCTTGATAGTTGTGTaGCTTTGGGCAAGTTACTTGACCTCTCTGTACCTTAGTCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: PLCDIKPQLCSLIVV*LWASYLTSLYLSLN Trigger: ATTAAGACTAAGGTACAGAGAGGTCAAGTAACTTGCCCAAAGTCACACAACTATCAAGGAGCAGAGCTGAGGTTTGATGTCACAGAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447183.3 |
||
| CDS TCA 90 bp | CTGTTTTTATGGACAGGAACATTCGGTCCTCAGCAGACTTGCCTCTaGATTCACAGGCTCCTCTTACAATGCAAGCCACAATTCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LFLWTGTFGPQQTCL*IHRLLLQCKPQFSF Trigger: AAAGGAGAATTGTGGCTTGCATTGTAAGAGGAGCCTGTGAATTCAGAGGCAAGTCTGCTGAGGACCGAATGTTCCTGTCCATAAAAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000634576.1 ENST00000671620.1 |
||
| CDS TCA 90 bp | CTGTTTTTATGGACAGGAACATTCGGTCCTCAGCAGACTTGCCTCTaGATTCACAGGCTCCTCTTACAATGCAAGCCACAATTCTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: LFLWTGTFGPQQTCL*IHRLLLQCKPQFCI Trigger: AATGCAGAATTGTGGCTTGCATTGTAAGAGGAGCCTGTGAATTCAGAGGCAAGTCTGCTGAGGACCGAATGTTCCTGTCCATAAAAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000653027.1 ENST00000662911.1 ENST00000666885.1 |
||
| CDS GCA 90 bp | CCTGATGACTACTTCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTGTGCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PDDYFLIGGKFMLPN*RFLHSRLGVVVCIC Trigger: ACAGATGCACACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGAAGTAGTCATCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000436475.3 ENST00000656034.1 ENST00000658957.1 |
||
| CDS GCA 90 bp | CTCTGTACCTTAGTCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTGTGCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LCTLVLIGGKFMLPN*RFLHSRLGVVVCIC Trigger: ACAGATGCACACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGACTAAGGTACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447183.3 |
||
| CDS GCA 90 bp | TGCAAGCCACAATTCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTGTGCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CKPQFLIGGKFMLPN*RFLHSRLGVVVCIC Trigger: ACAGATGCACACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGAATTGTGGCTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000634725.1 ENST00000635458.1 ENST00000635555.1 ENST00000656229.1 ENST00000658184.1 ENST00000662017.1 ENST00000663270.1 ENST00000666431.1 ENST00000667957.1 |
||
| CDS GCA 90 bp | CTGAATTCACAGGCTCCTCTTACAATGCAAGCCACAATTCTGCATTaGTACGAGAACCTCCAACTTCCGTATCTTCACTCTTTCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LNSQAPLTMQATILH*YENLQLPYLHSFST Trigger: TGTGGAGAAAGAGTGAAGATACGGAAGTTGGAGGTTCTCGTAGCAATGCAGAATTGTGGCTTGCATTGTAAGAGGAGCCTGTGAATTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653027.1 ENST00000662911.1 ENST00000666885.1 |
||
| CDS GCA 90 bp | ATCTTCACCAGTTCCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTGTGCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IFTSSLIGGKFMLPN*RFLHSRLGVVVCIC Trigger: ACAGATGCACACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGGAACTGGTGAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664269.1 ENST00000667879.1 |
||
| CDS GCA 90 bp | AAGCATGAAGTAGGCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTGTGCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KHEVGLIGGKFMLPN*RFLHSRLGVVVCIC Trigger: ACAGATGCACACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGCCTACTTCATGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656075.1 |
||
| CDS TCA 90 bp | TTCTTGTTCCAAGGACACATTTTATGGCAAAGCAGAGAACGGCCTTaGCAGAGATTCTTCAGTCTCTCAGGAGAAAGGTATGGAGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: FLFQGHILWQSRERP*QRFFSLSGERYGAT Trigger: AGTTGCTCCATACCTTTCTCCTGAGAGACTGAAGAATCTCTGTCAAGGCCGTTCTCTGCTTTGCCATAAAATGTGTCCTTGGAACAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000432537.2 ENST00000447183.3 ENST00000634725.1 ENST00000635458.1 ENST00000656075.1 ENST00000656229.1 ENST00000658184.1 ENST00000662017.1 ENST00000666431.1 ENST00000666885.1 ENST00000669810.1 ENST00000671553.1 |
||
| CDS TCA 90 bp | AATGCACAATGTTATGCCAACAGGATGCAGATGATGCAGATGACATaGATGTTTTTCCTTCGCCTCAAACAGGGAGTCAAGTCGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NAQCYANRMQMMQMT*MFFLRLKQGVKSEK Trigger: CTTCTCCGACTTGACTCCCTGTTTGAGGCGAAGGAAAAACATTCATGTCATCTGCATCATCTGCATCCTGTTGGCATAACATTGTGCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000669810.1 ENST00000671553.1 |
||
| CDS TCA 90 bp | CTGTTTTTATGGACAGGAACATTCGGTCCTCAGCAGACTTGCCTCTaGATTCACAGGCTCCTCTTACAATGCAAGCCACAATTCTTAATA | + |
|
Preference number: 5 (lower is better) Translates to: LFLWTGTFGPQQTCL*IHRLLLQCKPQFLI Trigger: TATTAAGAATTGTGGCTTGCATTGTAAGAGGAGCCTGTGAATTCAGAGGCAAGTCTGCTGAGGACCGAATGTTCCTGTCCATAAAAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000634725.1 ENST00000635458.1 ENST00000635555.1 ENST00000656229.1 ENST00000658184.1 ENST00000662017.1 ENST00000663270.1 ENST00000666431.1 ENST00000667957.1 |
||
| CDS GCA 90 bp | TTTACATTAAGTGCTACTCCATCAGAGCTGAGAGAAGCTGACATCTaGATTGCTACGAGAACCTCCAACTTCCGTATCTTCACTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FTLSATPSELREADI*IATRTSNFRIFTLS Trigger: AGAAAGAGTGAAGATACGGAAGTTGGAGGTTCTCGTAGCAATGCAGATGTCAGCTTCTCTCAGCTCTGATGGAGTAGCACTTAATGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000634576.1 ENST00000655035.1 ENST00000671620.1 |
||
| CDS GCA 90 bp | AATTTCTTGCATTCCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTGTGCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NFLHSLIGGKFMLPN*RFLHSRLGVVVCIC Trigger: ACAGATGCACACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGGAATGCAAGAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667523.1 |
||
| CDS CCA 90 bp | AGGCATCGAGGGGCTCCTCCCAAAATTCTATTGTATTCTGCAAGTTaGCTACTCAAAGTAAGAATCCCAGCTTTACTGATCCAGAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: RHRGAPPKILLYSAS*LLKVRIPALLIQKF Trigger: GAATTTCTGGATCAGTAAAGCTGGGATTCTTACTTTGAGTAGCCAACTTGCAGAATACAATAGAATTTTGGGAGGAGCCCCTCGATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000635218.1 ENST00000635458.1 ENST00000653027.1 ENST00000655035.1 ENST00000658104.1 ENST00000660198.1 ENST00000662911.1 ENST00000663270.1 ENST00000664269.1 ENST00000666431.1 ENST00000666885.1 ENST00000667005.1 ENST00000667879.1 ENST00000671620.1 |
||
| CDS CCA 90 bp | CAAGACAGGCAATTATATGACATACAAGCCCAGTTTAATAAAGACTaGGCTGGCATCCATTTACAAAACCCTCCAGAGGACACTGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QDRQLYDIQAQFNKD*AGIHLQNPPEDTEV Trigger: AACCTCAGTGTCCTCTGGAGGGTTTTGTAAATGGATGCCAGCCCAGTCTTTATTAAACTGGGCTTGTATGTCATATAATTGCCTGTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658957.1 |
||
| CDS CCA 90 bp | AGTAAATCCTTTAGCATCATCTCTTTCTTGTTGGAATTCCCAAGCTaGAAACTTCCTGCGATCAATATTCTAAAGACATGGTTCCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SKSFSIISFLLEFPS*KLPAINILKTWFLG Trigger: ACCCAGGAACCATGTCTTTAGAATATTGATCGCAGGAAGTTTCCAGCTTGGGAATTCCAACAAGAAAGAGATGATGCTAAAGGATTTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669810.1 |
||
| CDS GCA 90 bp | ATCATGACTTTCATAATGAGAGCCAGAAAGAAATTTGAGGTCTTATaGTCACTAGTTCCTAAGCCTGGGTGTTGTAGTCAGCATAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: IMTFIMRARKKFEVL*SLVPKPGCCSQHNN Trigger: GTTATTATGCTGACTACAACACCCAGGCTTAGGAACTAGTGAGCATAAGACCTCAAATTTCTTTCTGGCTCTCATTATGAAAGTCATGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656034.1 ENST00000658957.1 |
||
| CDS CCA 90 bp | AGTGACTGTTTAAAGTTCAGGGACCTCAGAAAGAACTTGTTCCACTaGCTAGTTCAGTGTCTAAAAGTAGCTGTAACCAAATATCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: SDCLKFRDLRKNLFH*LVQCLKVAVTKYQQ Trigger: TTGTTGATATTTGGTTACAGCTACTTTTAGACACTGAACTAGCCAGTGGAACAAGTTCTTTCTGAGGTCCCTGAACTTTAAACAGTCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455304.6 |
||
| CDS TCA 90 bp | AATGTGTCCTATCCAAGAAGGCAATCCACAGCAACAGTTAAATTATaGATACAGCACATATGTTCCATACCATATCATTTACAGCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: NVSYPRRQSTATVKL*IQHICSIPYHLQHN Trigger: ATTGTGCTGTAAATGATATGGTATGGAACATATGTGCTGTATTCATAATTTAACTGTTGCTGTGGATTGCCTTCTTGGATAGGACACATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436475.3 ENST00000656034.1 |
||
| CDS GCA 72 bp | AGCGCCGGAGGACCCGAGGAGGTCTGCCCCGCGCGCTaGTCTGGAGACTCCCGGGGCGGGTGGCGCTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SAGGPEEVCPAR*SGDSRGGWRSA Trigger: GGCCGAGCGCCACCCGCCCCGGGAGTCTCCAGAGCAGCGCGCGGGGCAGACCTCCTCGGGTCCTCCGGCGCT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000635218.1 ENST00000653027.1 ENST00000656229.1 ENST00000663270.1 |
||
| CDS GCA 72 bp | TCCGGAGACCGAAGCGCCGGAGGACCCGAGGAGGTCTaGCCCGCGCGCTGCTCTGGAGACTCCCGGGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SGDRSAGGPEEV*PARCSGDSRGG Trigger: CCCGCCCCGGGAGTCTCCAGAGCAGCGCGCGGGGCAGACCTCCTCGGGTCCTCCGGCGCTTCGGTCTCCGGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000635218.1 ENST00000653027.1 ENST00000656229.1 ENST00000660198.1 ENST00000663270.1 |
||
| CDS CCA 72 bp | CGGAGGACCCGAGGAGGTCTGCCCCGCGCGCTGCTCTaGAGACTCCCGGGGCGGGTGGCGCTCGGCCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRTRGGLPRALL*RLPGRVALGLS Trigger: GGAAAGGCCGAGCGCCACCCGCCCCGGGAGTCTCCAGAGCAGCGCGCGGGGCAGACCTCCTCGGGTCCTCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000635218.1 ENST00000653027.1 ENST00000656229.1 ENST00000663270.1 |
||
| CDS CCA 72 bp | CAGAGTGAGACCCTGGACGTAACAAGACGGAAGGGCTaGGCGCTGAGGTCCTGCCAGCCCGGCCGCCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QSETLDVTRRKG*ALRSCQPGRQR Trigger: CCTCTGGCGGCCGGGCTGGCAGGACCTCAGCGCCCAGCCCTTCCGTCTTGTTACGTCCAGGGTCTCACTCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000436475.3 ENST00000634725.1 ENST00000635218.1 ENST00000635458.1 ENST00000653027.1 ENST00000656229.1 ENST00000658184.1 ENST00000658957.1 ENST00000660198.1 ENST00000662911.1 ENST00000663270.1 ENST00000664269.1 ENST00000667005.1 ENST00000671620.1 |
||
| CDS CCA 72 bp | CTGTCCATTCTGGGGGTGACCTTTCCACCAGGTCCCTaGCATAAGGCAGTGTGTCTCCTGGAGCAAAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSILGVTFPPGP*HKAVCLLEQSQ Trigger: CTGGCTTTGCTCCAGGAGACACACTGCCTTATGCCAGGGACCTGGTGGAAAGGTCACCCCCAGAATGGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000656034.1 ENST00000658957.1 |
||
| CDS CCA 72 bp | CTGTCCATTCTGGGGGTGACCTTTCCACCAGGTCCCTaGCATAAGGCAGTGTGTCTCTCAGTGGGTCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: LSILGVTFPPGP*HKAVCLSVGPM Trigger: CATTGGACCCACTGAGAGACACACTGCCTTATGCCAGGGACCTGGTGGAAAGGTCACCCCCAGAATGGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436475.3 |
||
| CDS CCA 72 bp | CCCAAGAGAGGAGCCCAGGCCAGACTTCTGTTTTTATaGACAGGAACATTCGGTCCTCAGCAGACTTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PKRGAQARLLFL*TGTFGPQQTCL Trigger: GAGGCAAGTCTGCTGAGGACCGAATGTTCCTGTCCATAAAAACAGAAGTCTGGCCTGGGCTCCTCTCTTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 21 transcripts: ENST00000455304.6 ENST00000634576.1 ENST00000634725.1 ENST00000635218.1 ENST00000635458.1 ENST00000635555.1 ENST00000653027.1 ENST00000655035.1 ENST00000656229.1 ENST00000658104.1 ENST00000658184.1 ENST00000660198.1 ENST00000662017.1 ENST00000662911.1 ENST00000663270.1 ENST00000665381.1 ENST00000666431.1 ENST00000666885.1 ENST00000667005.1 ENST00000667957.1 ENST00000671620.1 |
||
| CDS GCA 72 bp | CATGGCCCACCAACAGGTCACAATCCACAGAGTGTCTaGCATCTCCTCTATGTAGCCTTTCCTGTTTCACGC | + |
|
Preference number: 6 (lower is better) Translates to: HGPPTGHNPQSV*HLLYVAFPVSR Trigger: GCGTGAAACAGGAAAGGCTACATAGAGGAGATGGCAGACACTCTGTGGATTGTGACCTGTTGGTGGGCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000447183.3 ENST00000634725.1 ENST00000635458.1 ENST00000656075.1 ENST00000656229.1 ENST00000658184.1 ENST00000662017.1 ENST00000666431.1 ENST00000666885.1 ENST00000669810.1 |
||
| CDS GCA 72 bp | GGTGAACAGGCTACCTCATTAATCCTAGTTAGTAGATaGTGCCGGGCATGTGGAGCCGCCAAATCCAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: GEQATSLILVSR*CRACGAAKSRC Trigger: GCATCTGGATTTGGCGGCTCCACATGCCCGGCAGCATCTACTAACTAGGATTAATGAGGTAGCCTGTTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000634576.1 ENST00000655035.1 ENST00000671620.1 |
||
| CDS GCA 72 bp | GAACAGGCTACCTCATTAATCCTAGTTAGTAGATGCTaGCGGGCATGTGGAGCCGCCAAATCCAGATGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: EQATSLILVSRC*RACGAAKSRCY Trigger: GTAGCATCTGGATTTGGCGGCTCCACATGCCCGGCAGCATCTACTAACTAGGATTAATGAGGTAGCCTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000634576.1 ENST00000655035.1 ENST00000671620.1 |
||
| CDS CCA 72 bp | TGCAAAGGTTCTGTCTCTGTAAGGCCACAGGGTAAATaGATAGAACGTGGGCCAGGCTTCTTTCCAGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CKGSVSVRPQGK*IERGPGFFPGS Trigger: TGAGCCTGGAAAGAAGCCTGGCCCACGTTCTATCCATTTACCCTGTGGCCTTACAGAGACAGAACCTTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662017.1 ENST00000666431.1 |
||
| CDS TCA 72 bp | TGGACAGGAACATTCGGTCCTCAGCAGACTTGCCTCTaGATTCACAGGCTCCTCTTACAATGCAAGCCACAA | + |
|
Preference number: 6 (lower is better) Translates to: WTGTFGPQQTCL*IHRLLLQCKPQ Trigger: TTGTGGCTTGCATTGTAAGAGGAGCCTGTGAATTCAGAGGCAAGTCTGCTGAGGACCGAATGTTCCTGTCCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000455304.6 ENST00000634576.1 ENST00000634725.1 ENST00000635218.1 ENST00000635458.1 ENST00000635555.1 ENST00000653027.1 ENST00000655035.1 ENST00000656229.1 ENST00000658104.1 ENST00000658184.1 ENST00000660198.1 ENST00000662017.1 ENST00000662911.1 ENST00000663270.1 ENST00000665381.1 ENST00000666431.1 ENST00000666885.1 ENST00000667005.1 ENST00000667957.1 ENST00000671620.1 |
||
| CDS GCA 72 bp | CCACGAAAGGGAACAGTAAAAGCACAGTGCAGGCTCTaGAAAGGTTCTGTCTCTGTAAGGCCACAGGGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: PRKGTVKAQCRL*KGSVSVRPQGK Trigger: TTTACCCTGTGGCCTTACAGAGACAGAACCTTTGCAGAGCCTGCACTGTGCTTTTACTGTTCCCTTTCGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662017.1 ENST00000666431.1 |
||
| CDS GCA 72 bp | ATTCTCTTCCATCTCTGTGGCTCTGAAGAGGCCATGTaGTCAGTCTTCCAGCTCTTACTGTGGTCAAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ILFHLCGSEEAM*SVFQLLLWSKA Trigger: TGCCTTTGACCACAGTAAGAGCTGGAAGACTGAGCACATGGCCTCTTCAGAGCCACAGAGATGGAAGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671553.1 |
||
| CDS CCA 72 bp | GAAGAGGCCATGTGCTCAGTCTTCCAGCTCTTACTGTaGTCAAAGGCACTGGATGCTTTGATTAGCCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: EEAMCSVFQLLL*SKALDALISQA Trigger: AGCTTGGCTAATCAAAGCATCCAGTGCCTTTGACCACAGTAAGAGCTGGAAGACTGAGCACATGGCCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671553.1 |
||
| CDS TCA 72 bp | CTTGAAGAAATGCAGTTAAGGACTTACACTGTTAAGTaGGCTCTTCCCAGCCTGTCCATTCTGGGGGTGACC | + |
|
Preference number: 6 (lower is better) Translates to: LEEMQLRTYTVK*ALPSLSILGVT Trigger: GGTCACCCCCAGAATGGACAGGCTGGGAAGAGCTCACTTAACAGTGTAAGTCCTTAACTGCATTTCTTCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658957.1 |
||
| CDS TCA 72 bp | CTTTGCCCCGCTTCCTCTGTCACCCATCACAGACTGTaGGTACTGTCACAGGGGTATGAAACAGCAAATAAT | + |
|
Preference number: 6 (lower is better) Translates to: LCPASSVTHHRL*VLSQGYETANN Trigger: ATTATTTGCTGTTTCATACCCCTGTGACAGTACTCACAGTCTGTGATGGGTGACAGAGGAAGCGGGGCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000669810.1 ENST00000671553.1 |
||
| CDS TCA 72 bp | CGCCTCAAACAGGGAGTCAAGTCGGAGAAGCAAGCATaGAAACAGAAACTAACCTTAAGCCAAAGCACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RLKQGVKSEKQA*KQKLTLSQSTG Trigger: GCCTGTGCTTTGGCTTAAGGTTAGTTTCTGTTTTCATGCTTGCTTCTCCGACTTGACTCCCTGTTTGAGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000669810.1 ENST00000671553.1 |
||
| CDS GCA 72 bp | CCAATTGTAGCTGCATTCACAGGTGACCGTGCTGTCTaGCTGCCTTCCCAGAGATACAAGAAACAAAACCAA | + |
|
Preference number: 6 (lower is better) Translates to: PIVAAFTGDRAV*LPSQRYKKQNQ Trigger: TTGGTTTTGTTTCTTGTATCTCTGGGAAGGCAGGCAGACAGCACGGTCACCTGTGAATGCAGCTACAATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 21 transcripts: ENST00000455304.6 ENST00000634576.1 ENST00000634725.1 ENST00000635218.1 ENST00000635458.1 ENST00000635555.1 ENST00000653027.1 ENST00000655035.1 ENST00000656229.1 ENST00000658104.1 ENST00000658184.1 ENST00000660198.1 ENST00000662017.1 ENST00000662911.1 ENST00000663270.1 ENST00000665381.1 ENST00000666431.1 ENST00000666885.1 ENST00000667005.1 ENST00000667957.1 ENST00000671620.1 |
||
| CDS GCA 72 bp | AGTGCTACTCCATCAGAGCTGAGAGAAGCTGACATCTaGATTGCTACGAGAACCTCCAACTTCCGTATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SATPSELREADI*IATRTSNFRIF Trigger: GAAGATACGGAAGTTGGAGGTTCTCGTAGCAATGCAGATGTCAGCTTCTCTCAGCTCTGATGGAGTAGCACT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000634576.1 ENST00000655035.1 ENST00000671620.1 |
||
| CDS CCA 72 bp | CCCCTTGGGAAGCTGCACAGGAAAAGTGCTCGAGGATaGGATGTATGTAAACAGTTCAGATGGTCCATAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PLGKLHRKSARG*DVCKQFRWSIE Trigger: TTCTATGGACCATCTGAACTGTTTACATACATCCCATCCTCGAGCACTTTTCCTGTGCAGCTTCCCAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634576.1 |
||
| CDS TCA 72 bp | TTCTTCAGTCTCTCAGGAGAAAGGTATGGAGCAACTTaGGGGACTCTGTGCAGTAAATCACCAGGACCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: FFSLSGERYGAT*GTLCSKSPGPD Trigger: ATCTGGTCCTGGTGATTTACTGCACAGAGTCCCTCAAGTTGCTCCATACCTTTCTCCTGAGAGACTGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000432537.2 ENST00000447183.3 ENST00000634725.1 ENST00000635458.1 ENST00000656075.1 ENST00000656229.1 ENST00000658184.1 ENST00000662017.1 ENST00000666431.1 ENST00000666885.1 ENST00000669810.1 ENST00000671553.1 |
||
| CDS GCA 72 bp | AGTGCCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SALIGGKFMLPN*RFLHSRLGVVV Trigger: CACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455304.6 |
||
| CDS GCA 72 bp | GGGATCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GILIGGKFMLPN*RFLHSRLGVVV Trigger: CACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635218.1 |
||
| CDS GCA 72 bp | CAGGCTCCTCTTACAATGCAAGCCACAATTCTGCATTaGTACGAGAACCTCCAACTTCCGTATCTTCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: QAPLTMQATILH*YENLQLPYLHS Trigger: AGAGTGAAGATACGGAAGTTGGAGGTTCTCGTAGCAATGCAGAATTGTGGCTTGCATTGTAAGAGGAGCCTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653027.1 ENST00000662911.1 ENST00000666885.1 |
||
| CDS GCA 72 bp | GTAGGCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VGLIGGKFMLPN*RFLHSRLGVVV Trigger: CACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGCCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656075.1 |
||
| CDS GCA 72 bp | GCTGTCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AVLIGGKFMLPN*RFLHSRLGVVV Trigger: CACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671620.1 |
||
| CDS CAA 72 bp | ACAGGCTCCTCTTACAATGCAAGCCACAATTCTGCATaGCTACGAGAACCTCCAACTTCCGTATCTTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: TGSSYNASHNSA*LREPPTSVSSL Trigger: GAGTGAAGATACGGAAGTTGGAGGTTCTCGTAGCAATGCAGAATTGTGGCTTGCATTGTAAGAGGAGCCTGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653027.1 ENST00000662911.1 ENST00000666885.1 |
||
| CDS CAA 90 bp | TCTGAATTCACAGGCTCCTCTTACAATGCAAGCCACAATTCTGCATaGCTACGAGAACCTCCAACTTCCGTATCTTCACTCTTTCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SEFTGSSYNASHNSA*LREPPTSVSSLFLH Trigger: GTGGAGAAAGAGTGAAGATACGGAAGTTGGAGGTTCTCGTAGCAATGCAGAATTGTGGCTTGCATTGTAAGAGGAGCCTGTGAATTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653027.1 ENST00000662911.1 ENST00000666885.1 |
||
| CDS GCA 72 bp | GCATCGAGGGGCTCCTCCCAAAATTCTATTGTATTCTaGAAGTTGGCTACTCAAAGTAAGAATCCTGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: ASRGSSQNSIVF*KLATQSKNPGW Trigger: CCATCCAGGATTCTTACTTTGAGTAGCCAACTTGCAGAATACAATAGAATTTTGGGAGGAGCCCCTCGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000634725.1 ENST00000656229.1 ENST00000662017.1 ENST00000665381.1 ENST00000667957.1 |
||
| CDS GCA 72 bp | CAGATCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QILIGGKFMLPN*RFLHSRLGVVV Trigger: CACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000634576.1 ENST00000653027.1 ENST00000655035.1 ENST00000660198.1 ENST00000662911.1 ENST00000665381.1 ENST00000666885.1 ENST00000667005.1 |
||
| CDS GCA 72 bp | ATTCACAGGCTCCTCTTACAATGCAAGCCACAATTCTaGATTGCTACGAGAACCTCCAACTTCCGTATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IHRLLLQCKPQF*IATRTSNFRIF Trigger: GAAGATACGGAAGTTGGAGGTTCTCGTAGCAATGCAGAATTGTGGCTTGCATTGTAAGAGGAGCCTGTGAAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653027.1 ENST00000662911.1 ENST00000666885.1 |
||
| CDS GCA 72 bp | AGTTCCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSLIGGKFMLPN*RFLHSRLGVVV Trigger: CACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664269.1 ENST00000667879.1 |
||
| CDS GCA 72 bp | CATTCCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: HSLIGGKFMLPN*RFLHSRLGVVV Trigger: CACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667523.1 |
||
| CDS CAA 72 bp | CCAAGGACACATTTTATGGCAAAGCAGAGAACGGCCTaGACAGAGATTCTTCAGTCTCTCAGGAGAAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: PRTHFMAKQRTA*TEILQSLRRKV Trigger: TACCTTTCTCCTGAGAGACTGAAGAATCTCTGTCAAGGCCGTTCTCTGCTTTGCCATAAAATGTGTCCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000432537.2 ENST00000447183.3 ENST00000634725.1 ENST00000635458.1 ENST00000656075.1 ENST00000656229.1 ENST00000658184.1 ENST00000662017.1 ENST00000666431.1 ENST00000666885.1 ENST00000669810.1 ENST00000671553.1 |
||
| CDS CAA 72 bp | AAACTTATACAGGCATGCCTCGGAGATAGTGTGGGTTaGGTTCCAGATCCCTTTTCCAAACGTTTCCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: KLIQACLGDSVG*VPDPFSKRFHG Trigger: ACCATGGAAACGTTTGGAAAAGGGATCTGGAACCAAACCCACACTATCTCCGAGGCATGCCTGTATAAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635218.1 |
||
| CDS CAA 90 bp | ATTCTTGTTCCAAGGACACATTTTATGGCAAAGCAGAGAACGGCCTaGACAGAGATTCTTCAGTCTCTCAGGAGAAAGGTATGGAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: ILVPRTHFMAKQRTA*TEILQSLRRKVWSN Trigger: GTTGCTCCATACCTTTCTCCTGAGAGACTGAAGAATCTCTGTCAAGGCCGTTCTCTGCTTTGCCATAAAATGTGTCCTTGGAACAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000432537.2 ENST00000447183.3 ENST00000634725.1 ENST00000635458.1 ENST00000656075.1 ENST00000656229.1 ENST00000658184.1 ENST00000662017.1 ENST00000666431.1 ENST00000666885.1 ENST00000669810.1 ENST00000671553.1 |
||
| CDS TCA 72 bp | CAAGGACACATTTTATGGCAAAGCAGAGAACGGCCTTaGCAGAGATTCTTCAGTCTCTCAGGAGAAAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: QGHILWQSRERP*QRFFSLSGERY Trigger: ATACCTTTCTCCTGAGAGACTGAAGAATCTCTGTCAAGGCCGTTCTCTGCTTTGCCATAAAATGTGTCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000432537.2 ENST00000447183.3 ENST00000634725.1 ENST00000635458.1 ENST00000656075.1 ENST00000656229.1 ENST00000658184.1 ENST00000662017.1 ENST00000666431.1 ENST00000666885.1 ENST00000669810.1 ENST00000671553.1 |
||
| CDS TCA 72 bp | TGTTATGCCAACAGGATGCAGATGATGCAGATGACATaGATGTTTTTCCTTCGCCTCAAACAGGGAGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: CYANRMQMMQMT*MFFLRLKQGVK Trigger: CTTGACTCCCTGTTTGAGGCGAAGGAAAAACATTCATGTCATCTGCATCATCTGCATCCTGTTGGCATAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000669810.1 ENST00000671553.1 |
||
| CDS GCA 72 bp | TACTTCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: YFLIGGKFMLPN*RFLHSRLGVVV Trigger: CACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000436475.3 ENST00000656034.1 ENST00000658957.1 |
||
| CDS GCA 72 bp | TTAGTCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVLIGGKFMLPN*RFLHSRLGVVV Trigger: CACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447183.3 |
||
| CDS GCA 72 bp | CAATTCTTAATAGGTGGTAAATTCATGCTTCCCAACTaGAGGTTTCTTCATTCTAGGCTGGGTGTGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QFLIGGKFMLPN*RFLHSRLGVVV Trigger: CACCACCACACCCAGCCTAGAATGAAGAAACCTGCAGTTGGGAAGCATGAATTTACCACCTATTAAGAATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000634725.1 ENST00000635458.1 ENST00000635555.1 ENST00000656229.1 ENST00000658184.1 ENST00000662017.1 ENST00000663270.1 ENST00000666431.1 ENST00000667957.1 |
||
| CDS GCA 72 bp | GCATCGAGGGGCTCCTCCCAAAATTCTATTGTATTCTaGAAGTTGGCTACTCAAAGTAAGAATCCCAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ASRGSSQNSIVF*KLATQSKNPSF Trigger: AAAGCTGGGATTCTTACTTTGAGTAGCCAACTTGCAGAATACAATAGAATTTTGGGAGGAGCCCCTCGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000635218.1 ENST00000635458.1 ENST00000653027.1 ENST00000655035.1 ENST00000658104.1 ENST00000660198.1 ENST00000662911.1 ENST00000663270.1 ENST00000664269.1 ENST00000666431.1 ENST00000666885.1 ENST00000667005.1 ENST00000667879.1 ENST00000671620.1 |
||
| CDS CCA 72 bp | CAGAGTGTCATGTTTGTCCTGATCTCCCTTGGAATATaGCTGAAGCATATTCCCATGAATAAAGTCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QSVMFVLISLGI*LKHIPMNKVQQ Trigger: CTGCTGGACTTTATTCATGGGAATATGCTTCAGCCATATTCCAAGGGAGATCAGGACAAACATGACACTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671553.1 |
||
| CDS CAA 72 bp | AGCCACAGAAGAGTGAGCTATACTAGCAATCAAACTTaGAGTGTACTTGTCCATGTTCCCCAGTCAGAGATC | + |
|
Preference number: 6 (lower is better) Translates to: SHRRVSYTSNQT*SVLVHVPQSEI Trigger: GATCTCTGACTGGGGAACATGGACAAGTACACTCAAAGTTTGATTGCTAGTATAGCTCACTCTTCTGTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656034.1 ENST00000658957.1 |
||
| CDS CAA 90 bp | CTGTTTCACGCCCTTCATAGAGCTCCTATTGGCACTTCTACTATATaGCAATTATTTGTGTTGCAGGCTCTGTTCTTCCTGACTGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LFHALHRAPIGTSTI*QLFVLQALFFLTVS Trigger: ACTCACAGTCAGGAAGAACAGAGCCTGCAACACAAATAATTGCAATATAGTAGAAGTGCCAATAGGAGCTCTATGAAGGGCGTGAAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000447183.3 ENST00000634725.1 ENST00000635458.1 ENST00000656075.1 ENST00000656229.1 ENST00000658184.1 ENST00000662017.1 ENST00000666431.1 ENST00000666885.1 ENST00000669810.1 ENST00000671553.1 |
||
| CDS CAA 90 bp | CCTCTATGTAGCCTTTCCTGTTTCACGCCCTTCATAGAGCTCCTATaGGCACTTCTACTATATTGCAATTATTTGTGTTGCAGGCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PLCSLSCFTPFIELL*ALLLYCNYLCCRLC Trigger: ACAGAGCCTGCAACACAAATAATTGCAATATAGTAGAAGTGCCAATAGGAGCTCTATGAAGGGCGTGAAACAGGAAAGGCTACATAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000447183.3 ENST00000634725.1 ENST00000635458.1 ENST00000656075.1 ENST00000656229.1 ENST00000658184.1 ENST00000662017.1 ENST00000666431.1 ENST00000666885.1 ENST00000669810.1 ENST00000671553.1 |
||
| CDS TCA 72 bp | CATGAAGTAGGCTGTTTAATAAATATGACTGTATCTTaGCCCCTCTGTGACATCAAACCTCAGCTCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HEVGCLINMTVS*PLCDIKPQLCS Trigger: GGAGCAGAGCTGAGGTTTGATGTCACAGAGGGGTCAAGATACAGTCATATTTATTAAACAGCCTACTTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447183.3 |
||
| CDS TCA 72 bp | TTCTGGGCTCCATCCCTTCCTAACAAAGAAGCTGTCTaGATTCTCTTAGCCTTGGACATTCTATCCACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: FWAPSLPNKEAV*ILLALDILSTK Trigger: TTTTGTGGATAGAATGTCCAAGGCTAAGAGAATTCAGACAGCTTCTTTGTTAGGAAGGGATGGAGCCCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669810.1 |
||
| CDS GCA 72 bp | CTCTTTCTTGTTGGAATTCCCAAGCTGGAAACTTCCTaGGATCAATATTCTAAAGACATGGTTCCTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LFLVGIPKLETS*DQYSKDMVPGS Trigger: AGACCCAGGAACCATGTCTTTAGAATATTGATCGCAGGAAGTTTCCAGCTTGGGAATTCCAACAAGAAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669810.1 |
||
| CDS CCA 72 bp | GGGGCTCCTCCCAAAATTCTATTGTATTCTGCAAGTTaGCTACTCAAAGTAAGAATCCTGGATGGGTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GAPPKILLYSAS*LLKVRILDGSF Trigger: AAAAGACCCATCCAGGATTCTTACTTTGAGTAGCCAACTTGCAGAATACAATAGAATTTTGGGAGGAGCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000634725.1 ENST00000656229.1 ENST00000662017.1 ENST00000665381.1 ENST00000667957.1 |
||
| CDS CCA 72 bp | GGGGCTCCTCCCAAAATTCTATTGTATTCTGCAAGTTaGCTACTCAAAGTAAGAATCCCAGCTTTACTGATC | + |
|
Preference number: 6 (lower is better) Translates to: GAPPKILLYSAS*LLKVRIPALLI Trigger: GATCAGTAAAGCTGGGATTCTTACTTTGAGTAGCCAACTTGCAGAATACAATAGAATTTTGGGAGGAGCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000635218.1 ENST00000635458.1 ENST00000653027.1 ENST00000655035.1 ENST00000658104.1 ENST00000660198.1 ENST00000662911.1 ENST00000663270.1 ENST00000664269.1 ENST00000666431.1 ENST00000666885.1 ENST00000667005.1 ENST00000667879.1 ENST00000671620.1 |
||
| CDS CAA 90 bp | TGCTCACTAGTTCCTAAGCCTGGGTGTTGTAGTCAGCATAATAACTaGCTTAACGTTTTATTCTTCAGGACTTCTAGCCACAGAAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: CSLVPKPGCCSQHNN*LNVLFFRTSSHRRV Trigger: CACTCTTCTGTGGCTAGAAGTCCTGAAGAATAAAACGTTAAGCAAGTTATTATGCTGACTACAACACCCAGGCTTAGGAACTAGTGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656034.1 ENST00000658957.1 |
||
| CDS CAA 90 bp | GCACTCTACGTAGGAGCTAAGAGGTTTTCAATCAATGTTTGTTCCTaGCCCTCCTTCCCTCATCTTCTAGGACTTCCAATATACTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ALYVGAKRFSINVCS*PSFPHLLGLPIYCF Trigger: AAAACAGTATATTGGAAGTCCTAGAAGATGAGGGAAGGAGGGCAAGGAACAAACATTGATTGAAAACCTCTTAGCTCCTACGTAGAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669810.1 |
||
| CDS GCA 72 bp | TTCATAATGAGAGCCAGAAAGAAATTTGAGGTCTTATaGTCACTAGTTCCTAAGCCTGGGTGTTGTAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: FIMRARKKFEVL*SLVPKPGCCSQ Trigger: CTGACTACAACACCCAGGCTTAGGAACTAGTGAGCATAAGACCTCAAATTTCTTTCTGGCTCTCATTATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656034.1 ENST00000658957.1 |
||
| CDS CCA 72 bp | GGGCGACAAAGTGAGACTCTTTTCCAAACGTTTCCATaGTTCACAAATAAGTCATCTGGTGTATACTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: GRQSETLFQTFP*FTNKSSGVYCT Trigger: AGTACAGTATACACCAGATGACTTATTTGTGAACCATGGAAACGTTTGGAAAAGAGTCTCACTTTGTCGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000634725.1 ENST00000662911.1 ENST00000663270.1 ENST00000665381.1 ENST00000667005.1 ENST00000667879.1 ENST00000667957.1 ENST00000671620.1 |
||
| CDS CCA 72 bp | GGGTTTGGTTCCAGATCCCTTTTCCAAACGTTTCCATaGTTCACAAATAAGTCATCTGGTGTATACTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: GFGSRSLFQTFP*FTNKSSGVYCT Trigger: AGTACAGTATACACCAGATGACTTATTTGTGAACCATGGAAACGTTTGGAAAAGGGATCTGGAACCAAACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635218.1 |
||
| CDS CCA 72 bp | CGCATGGCAGAAACAGTCCTTTTCCAAACGTTTCCATaGTTCACAAATAAGTCATCTGGTGTATACTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: RMAETVLFQTFP*FTNKSSGVYCT Trigger: AGTACAGTATACACCAGATGACTTATTTGTGAACCATGGAAACGTTTGGAAAAGGACTGTTTCTGCCATGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653027.1 ENST00000655035.1 ENST00000658104.1 ENST00000660198.1 ENST00000664269.1 |
||
| CDS CCA 72 bp | CAATTATATGACATACAAGCCCAGTTTAATAAAGACTaGGCTGGCATCCATTTACAAAACCCTCCAGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: QLYDIQAQFNKD*AGIHLQNPPED Trigger: GTCCTCTGGAGGGTTTTGTAAATGGATGCCAGCCCAGTCTTTATTAAACTGGGCTTGTATGTCATATAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658957.1 |
||
| CDS CAA 72 bp | CCTATTGGCACTTCTACTATATTGCAATTATTTGTGTaGCAGGCTCTGTTCTTCCTGACTGTGAGTTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PIGTSTILQLFV*QALFFLTVSSL Trigger: CAAGGAACTCACAGTCAGGAAGAACAGAGCCTGCAACACAAATAATTGCAATATAGTAGAAGTGCCAATAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000447183.3 ENST00000634725.1 ENST00000635458.1 ENST00000656075.1 ENST00000656229.1 ENST00000658184.1 ENST00000662017.1 ENST00000666431.1 ENST00000666885.1 ENST00000669810.1 ENST00000671553.1 |
||
| CDS CAA 72 bp | AGCCTTTCCTGTTTCACGCCCTTCATAGAGCTCCTATaGGCACTTCTACTATATTGCAATTATTTGTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLSCFTPFIELL*ALLLYCNYLCC Trigger: GCAACACAAATAATTGCAATATAGTAGAAGTGCCAATAGGAGCTCTATGAAGGGCGTGAAACAGGAAAGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000447183.3 ENST00000634725.1 ENST00000635458.1 ENST00000656075.1 ENST00000656229.1 ENST00000658184.1 ENST00000662017.1 ENST00000666431.1 ENST00000666885.1 ENST00000669810.1 ENST00000671553.1 |
||
| CDS CAA 72 bp | GTTCCTAAGCCTGGGTGTTGTAGTCAGCATAATAACTaGCTTAACGTTTTATTCTTCAGGACTTCTAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VPKPGCCSQHNN*LNVLFFRTSSH Trigger: GTGGCTAGAAGTCCTGAAGAATAAAACGTTAAGCAAGTTATTATGCTGACTACAACACCCAGGCTTAGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656034.1 ENST00000658957.1 |
||
| CDS CCA 72 bp | TTAAAGTTCAGGGACCTCAGAAAGAACTTGTTCCACTaGCTAGTTCAGTGTCTAAAAGTAGCTGTAACCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LKFRDLRKNLFH*LVQCLKVAVTK Trigger: TTTGGTTACAGCTACTTTTAGACACTGAACTAGCCAGTGGAACAAGTTCTTTCTGAGGTCCCTGAACTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455304.6 |
||
| CDS CAA 72 bp | GGCATTAGTAAATCCTTTAGCATCATCTCTTTCTTGTaGGAATTCCCAAGCTGGAAACTTCCTGCGATCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GISKSFSIISFL*EFPSWKLPAIN Trigger: ATTGATCGCAGGAAGTTTCCAGCTTGGGAATTCCAACAAGAAAGAGATGATGCTAAAGGATTTACTAATGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669810.1 |
||
| CDS CCA 72 bp | TTTAGCATCATCTCTTTCTTGTTGGAATTCCCAAGCTaGAAACTTCCTGCGATCAATATTCTAAAGACATGG | + |
|
Preference number: 6 (lower is better) Translates to: FSIISFLLEFPS*KLPAINILKTW Trigger: CCATGTCTTTAGAATATTGATCGCAGGAAGTTTCCAGCTTGGGAATTCCAACAAGAAAGAGATGATGCTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669810.1 |
||
| CDS CAA 90 bp | GTAAAATTCGGCATTAGTAAATCCTTTAGCATCATCTCTTTCTTGTaGGAATTCCCAAGCTGGAAACTTCCTGCGATCAATATTCTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VKFGISKSFSIISFL*EFPSWKLPAINILK Trigger: CTTTAGAATATTGATCGCAGGAAGTTTCCAGCTTGGGAATTCCAACAAGAAAGAGATGATGCTAAAGGATTTACTAATGCCGAATTTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669810.1 |
||
| CDS CAA 90 bp | CTTGAAGATGGGGATTATTTTATGAATCTCTATATTCCTCACACCTaGTCTCACATATTAAGACTGAGGCAATACTTAATGCCTCTACAA | + |
|
Preference number: 6 (lower is better) Translates to: LEDGDYFMNLYIPHT*SHILRLRQYLMPLQ Trigger: TTGTAGAGGCATTAAGTATTGCCTCAGTCTTAATATGTGAGACAAGGTGTGAGGAATATAGAGATTCATAAAATAATCCCCATCTTCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000447183.3 ENST00000634725.1 ENST00000635458.1 ENST00000656075.1 ENST00000656229.1 ENST00000658184.1 ENST00000662017.1 ENST00000666431.1 ENST00000666885.1 ENST00000669810.1 ENST00000671553.1 |
||
| CDS CAA 72 bp | AATCAGTATTTATTGAAGAAGACAATGGGGAAATTCTaGTTCCAAGGACACATTTTATGGCAAAGCAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: NQYLLKKTMGKF*FQGHILWQSRE Trigger: TTCTCTGCTTTGCCATAAAATGTGTCCTTGGAACAAGAATTTCCCCATTGTCTTCTTCAATAAATACTGATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000432537.2 ENST00000447183.3 ENST00000634725.1 ENST00000635458.1 ENST00000656075.1 ENST00000656229.1 ENST00000658184.1 ENST00000662017.1 ENST00000666431.1 ENST00000666885.1 ENST00000669810.1 ENST00000671553.1 |
||