Pregenerated sensors for LINC00463 (Homo sapiens)
Ensembl gene IDs: ENSG00000234056Ensembl transcript IDs: ENST00000413501.1, ENST00000657426.1, ENST00000669952.1
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATGTGTGGACGCTCCTTGCAGAAAGCCTGGCACCAGATGCAATGCTaGCGGCATGTTCCCGTGACCCCCTTGCCTGGGAAGCTGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: MCGRSLQKAWHQMQC*RHVPVTPLPGKLRL Trigger: CAGCCTCAGCTTCCCAGGCAAGGGGGTCACGGGAACATGCCGGCAGCATTGCATCTGGTGCCAGGCTTTCTGCAAGGAGCGTCCACACAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS GCA 90 bp | GAAATGTGTGGACGCTCCTTGCAGAAAGCCTGGCACCAGATGCAATaGTGCCGGCATGTTCCCGTGACCCCCTTGCCTGGGAAGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: EMCGRSLQKAWHQMQ*CRHVPVTPLPGKLR Trigger: CCTCAGCTTCCCAGGCAAGGGGGTCACGGGAACATGCCGGCAGCATTGCATCTGGTGCCAGGCTTTCTGCAAGGAGCGTCCACACATTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CCA 90 bp | ACAGGTGCCAGGAGAGAAATGTGTGGACGCTCCTTGCAGAAAGCCTaGCACCAGATGCAATGCTGCCGGCATGTTCCCGTGACCCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: TGARREMCGRSLQKA*HQMQCCRHVPVTPL Trigger: CAAGGGGGTCACGGGAACATGCCGGCAGCATTGCATCTGGTGCCAGGCTTTCTGCAAGGAGCGTCCACACATTTCTCTCCTGGCACCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS TCA 90 bp | CATAAGCCACCGCACCCAGCACTGGGTGGAATTTTCTATCCTAGGTaGGCCACCGAGGAGCTTCCCTTTGAGCTGCTGTGTGGCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: HKPPHPALGGIFYPR*ATEELPFELLCGCC Trigger: GCAGCAGCCACACAGCAGCTCAAAGGGAAGCTCCTCGGTGGCTCACCTAGGATAGAAAATTCCACCCAGTGCTGGGTGCGGTGGCTTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CCA 90 bp | CTTTTCCCTGTAATGCTGGTAGGCACCAAGGGGGCACAGGCCATGTaGCAGCTGACAGCACTGGTATTTGGGCAGTTTCCATGTTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: LFPVMLVGTKGAQAM*QLTALVFGQFPCSP Trigger: GGGGGAACATGGAAACTGCCCAAATACCAGTGCTGTCAGCTGCCACATGGCCTGTGCCCCCTTGGTGCCTACCAGCATTACAGGGAAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS GCA 90 bp | CCATGGGCCTCATGGAAGCTGAGACCACAATGTGAAGTGCACAGGTaGCAGGAGAGAAATGTGTGGACGCTCCTTGCAGAAAGCCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: PWASWKLRPQCEVHR*QERNVWTLLAESLA Trigger: TGCCAGGCTTTCTGCAAGGAGCGTCCACACATTTCTCTCCTGGCACCTGTGCACTTCACATTGTGGTCTCAGCTTCCATGAGGCCCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS GCA 90 bp | TCACTGCAGCCTCTGCCTGCCAGGCTTAAGCAATTCTCCTGCTTCTaGCTCGCCTGTAACTGGGATCACAGGTGTACGCCAACAAACCCA | + |
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Preference number: 5 (lower is better) Translates to: SLQPLPARLKQFSCF*LACNWDHRCTPTNP Trigger: TGGGTTTGTTGGCGTACACCTGTGATCCCAGTTACAGGCGAGGCAGAAGCAGGAGAATTGCTTAAGCCTGGCAGGCAGAGGCTGCAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CCA 90 bp | CTGAGACCACAATGTGAAGTGCACAGGTGCCAGGAGAGAAATGTGTaGACGCTCCTTGCAGAAAGCCTGGCACCAGATGCAATGCTGCCG | + |
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Preference number: 5 (lower is better) Translates to: LRPQCEVHRCQERNV*TLLAESLAPDAMLP Trigger: CGGCAGCATTGCATCTGGTGCCAGGCTTTCTGCAAGGAGCGTCCACACATTTCTCTCCTGGCACCTGTGCACTTCACATTGTGGTCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS TCA 90 bp | GGAAGACACAATTCAACCTACAACAAACGACATCACCAGCAACGGTaGCAGCATCCGCCTCACCTTCAGTCCTTCAACGCAGCCGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: GRHNSTYNKRHHQQR*QHPPHLQSFNAAAR Trigger: CCTGGCGGCTGCGTTGAAGGACTGAAGGTGAGGCGGATGCTGTCACCGTTGCTGGTGATGTCGTTTGTTGTAGGTTGAATTGTGTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS TCA 90 bp | CTGTATCTGAGGCCTGTCCTTGCCCTCCATGGGCCTCATGGAAGCTaGGACCACAATGTGAAGTGCACAGGTGCCAGGAGAGAAATGTGT | + |
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Preference number: 5 (lower is better) Translates to: LYLRPVLALHGPHGS*DHNVKCTGARREMC Trigger: ACACATTTCTCTCCTGGCACCTGTGCACTTCACATTGTGGTCTCAGCTTCCATGAGGCCCATGGAGGGCAAGGACAGGCCTCAGATACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS TCA 90 bp | CTGCTCATGTCCATTCCCACCTGGGATTATCCTCCAAGGTGGACTTaGGAAGCTGTGCTGCCAGTGAGAACCCCCAAATGTCCAGCCCAA | + |
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Preference number: 5 (lower is better) Translates to: LLMSIPTWDYPPRWT*EAVLPVRTPKCPAQ Trigger: TTGGGCTGGACATTTGGGGGTTCTCACTGGCAGCACAGCTTCTCAAGTCCACCTTGGAGGATAATCCCAGGTGGGAATGGACATGAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS TCA 90 bp | CCCAAAAGCCAGACAGGTAAGGAGAGACTCTGTAGGGGAGAGAGATaGGGCGCAGGATGGTCCAATGGTTTGTTGGTTAGAGCCAGGTTA | + |
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Preference number: 5 (lower is better) Translates to: PKSQTGKERLCRGER*GAGWSNGLLVRARL Trigger: TAACCTGGCTCTAACCAACAAACCATTGGACCATCCTGCGCCTCATCTCTCTCCCCTACAGAGTCTCTCCTTACCTGTCTGGCTTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000413501.1 ENST00000657426.1 |
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| CDS TCA 90 bp | AATCCATTAGCTTCGAGACACATTTTTCCAATCTCTGCCTCGGTCTaGGGCGGAGATGTTATGTTCCCTCTGCGTGCCTGTCTGTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: NPLASRHIFPISASV*GGDVMFPLRACLCL Trigger: GAGACACAGACAGGCACGCAGAGGGAACATAACATCTCCGCCTCAGACCGAGGCAGAGATTGGAAAAATGTGTCTCGAAGCTAATGGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS GCA 90 bp | GAATTTTCTATCCTAGGTGAGCCACCGAGGAGCTTCCCTTTGAGCTaGTGTGTGGCTGCTGCTAAGGGACTTCTCATATGTCATAGCATT | + |
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Preference number: 5 (lower is better) Translates to: EFSILGEPPRSFPLS*CVAAAKGLLICHSI Trigger: AATGCTATGACATATGAGAAGTCCCTTAGCAGCAGCCACACAGCAGCTCAAAGGGAAGCTCCTCGGTGGCTCACCTAGGATAGAAAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CCA 90 bp | TCTGTAGGGGAGAGAGATGAGGCGCAGGATGGTCCAATGGTTTGTTaGTTAGAGCCAGGTTATGAATCATCACAAAGACTGAGCCATACC | + |
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Preference number: 5 (lower is better) Translates to: SVGERDEAQDGPMVC*LEPGYESSQRLSHT Trigger: GGTATGGCTCAGTCTTTGTGATGATTCATAACCTGGCTCTAACCAACAAACCATTGGACCATCCTGCGCCTCATCTCTCTCCCCTACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413501.1 ENST00000657426.1 |
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| CDS CCA 90 bp | CATCTAGTCACATGGCCACATCTGGCTACTAGAGAGTGGGAAATATaGTCTAACCACGTGCCTGGCCACATTCCTATTACTACAGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: HLVTWPHLATREWEI*SNHVPGHIPITTEG Trigger: TCCTTCTGTAGTAATAGGAATGTGGCCAGGCACGTGGTTAGACCATATTTCCCACTCTCTAGTAGCCAGATGTGGCCATGTGACTAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413501.1 |
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| CDS TCA 90 bp | CCAATAAATCCCAATCCCCATCCACATAAGTTGGCGTTTTATAAATaGCGTATGTTGGCCATTGCAGCTTCTGTTGTTATGAGATACAGC | + |
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Preference number: 5 (lower is better) Translates to: PINPNPHPHKLAFYK*RMLAIAASVVMRYS Trigger: GCTGTATCTCATAACAACAGAAGCTGCAATGGCCAACATACGTCATTTATAAAACGCCAACTTATGTGGATGGGGATTGGGATTTATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000413501.1 ENST00000657426.1 |
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| CDS CCA 90 bp | GCATTGCTGCTTAAGGAGGCTGCTAGCTTTACCTTAAACTTGCTGTaGGTCTTTAAAGGGATAATGGTTCATCAATACGGTTTGGAAATA | + |
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Preference number: 5 (lower is better) Translates to: ALLLKEAASFTLNLL*VFKGIMVHQYGLEI Trigger: TATTTCCAAACCGTATTGATGAACCATTATCCCTTTAAAGACCCACAGCAAGTTTAAGGTAAAGCTAGCAGCCTCCTTAAGCAGCAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS GCA 72 bp | GGACGCTCCTTGCAGAAAGCCTGGCACCAGATGCAATaGTGCCGGCATGTTCCCGTGACCCCCTTGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GRSLQKAWHQMQ*CRHVPVTPLPG Trigger: CCCAGGCAAGGGGGTCACGGGAACATGCCGGCAGCATTGCATCTGGTGCCAGGCTTTCTGCAAGGAGCGTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS GCA 72 bp | CGCTCCTTGCAGAAAGCCTGGCACCAGATGCAATGCTaGCGGCATGTTCCCGTGACCCCCTTGCCTGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RSLQKAWHQMQC*RHVPVTPLPGK Trigger: CTTCCCAGGCAAGGGGGTCACGGGAACATGCCGGCAGCATTGCATCTGGTGCCAGGCTTTCTGCAAGGAGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS GCA 72 bp | GCACAGGTGCCAGGAGAGAAATGTGTGGACGCTCCTTaGAGAAAGCCTGGCACCAGATGCAATGCTGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: AQVPGEKCVDAP*RKPGTRCNAAG Trigger: GCCGGCAGCATTGCATCTGGTGCCAGGCTTTCTGCAAGGAGCGTCCACACATTTCTCTCCTGGCACCTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CAA 90 bp | AGCATCCGCCTCACCTTCAGTCCTTCAACGCAGCCGCCAGGACCCTaGGCACAGACAAGACTGTCCTTGGGCTCAGTCATGAGTGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: SIRLTFSPSTQPPGP*AQTRLSLGSVMSGF Trigger: GAACCCACTCATGACTGAGCCCAAGGACAGTCTTGTCTGTGCCAAGGGTCCTGGCGGCTGCGTTGAAGGACTGAAGGTGAGGCGGATGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS TCA 72 bp | AGGCCTGTCCTTGCCCTCCATGGGCCTCATGGAAGCTaGGACCACAATGTGAAGTGCACAGGTGCCAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: RPVLALHGPHGS*DHNVKCTGARR Trigger: TCTCCTGGCACCTGTGCACTTCACATTGTGGTCTCAGCTTCCATGAGGCCCATGGAGGGCAAGGACAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS TCA 72 bp | CAGACCACTTGGCCAGCTCCTGACCTCACCCCAGGCTaGAATGTCTACCTCCCTGCTCATGTCCATTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: QTTWPAPDLTPG*NVYLPAHVHSH Trigger: GTGGGAATGGACATGAGCAGGGAGGTAGACATTTCAGCCTGGGGTGAGGTCAGGAGCTGGCCAAGTGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CAA 72 bp | CTCACCTTCAGTCCTTCAACGCAGCCGCCAGGACCCTaGGCACAGACAAGACTGTCCTTGGGCTCAGTCATG | + |
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Preference number: 6 (lower is better) Translates to: LTFSPSTQPPGP*AQTRLSLGSVM Trigger: CATGACTGAGCCCAAGGACAGTCTTGTCTGTGCCAAGGGTCCTGGCGGCTGCGTTGAAGGACTGAAGGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CAA 72 bp | TGCACAGGTGCCAGGAGAGAAATGTGTGGACGCTCCTaGCAGAAAGCCTGGCACCAGATGCAATGCTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: CTGARREMCGRS*QKAWHQMQCCR Trigger: CCGGCAGCATTGCATCTGGTGCCAGGCTTTCTGCAAGGAGCGTCCACACATTTCTCTCCTGGCACCTGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS TCA 72 bp | CCGCACCCAGCACTGGGTGGAATTTTCTATCCTAGGTaGGCCACCGAGGAGCTTCCCTTTGAGCTGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: PHPALGGIFYPR*ATEELPFELLC Trigger: ACACAGCAGCTCAAAGGGAAGCTCCTCGGTGGCTCACCTAGGATAGAAAATTCCACCCAGTGCTGGGTGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS GCA 72 bp | CCTCTGCCTGCCAGGCTTAAGCAATTCTCCTGCTTCTaGCTCGCCTGTAACTGGGATCACAGGTGTACGCCA | + |
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Preference number: 6 (lower is better) Translates to: PLPARLKQFSCF*LACNWDHRCTP Trigger: TGGCGTACACCTGTGATCCCAGTTACAGGCGAGGCAGAAGCAGGAGAATTGCTTAAGCCTGGCAGGCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CCA 72 bp | AGGAGAGAAATGTGTGGACGCTCCTTGCAGAAAGCCTaGCACCAGATGCAATGCTGCCGGCATGTTCCCGTG | + |
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Preference number: 6 (lower is better) Translates to: RREMCGRSLQKA*HQMQCCRHVPV Trigger: CACGGGAACATGCCGGCAGCATTGCATCTGGTGCCAGGCTTTCTGCAAGGAGCGTCCACACATTTCTCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CAA 72 bp | TTTCCCTTCAGTCCTTCAACGCAGCCGCCAGGACCCTaGGCACAGACAAGACTGTCCTTGGGCTCAGTCATG | + |
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Preference number: 6 (lower is better) Translates to: FPFSPSTQPPGP*AQTRLSLGSVM Trigger: CATGACTGAGCCCAAGGACAGTCTTGTCTGTGCCAAGGGTCCTGGCGGCTGCGTTGAAGGACTGAAGGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413501.1 |
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| CDS CAA 90 bp | AATGTGAAGTGCACAGGTGCCAGGAGAGAAATGTGTGGACGCTCCTaGCAGAAAGCCTGGCACCAGATGCAATGCTGCCGGCATGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: NVKCTGARREMCGRS*QKAWHQMQCCRHVP Trigger: GGGAACATGCCGGCAGCATTGCATCTGGTGCCAGGCTTTCTGCAAGGAGCGTCCACACATTTCTCTCCTGGCACCTGTGCACTTCACATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CAA 90 bp | CCTGCTCATGTCCATTCCCACCTGGGATTATCCTCCAAGGTGGACTaGAGAAGCTGTGCTGCCAGTGAGAACCCCCAAATGTCCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PAHVHSHLGLSSKVD*RSCAASENPQMSSP Trigger: TGGGCTGGACATTTGGGGGTTCTCACTGGCAGCACAGCTTCTCAAGTCCACCTTGGAGGATAATCCCAGGTGGGAATGGACATGAGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS TCA 72 bp | CCCTCCATGGGCCTCATGGAAGCTGAGACCACAATGTaGAGTGCACAGGTGCCAGGAGAGAAATGTGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: PSMGLMEAETTM*SAQVPGEKCVD Trigger: GTCCACACATTTCTCTCCTGGCACCTGTGCACTTCACATTGTGGTCTCAGCTTCCATGAGGCCCATGGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS GCA 72 bp | ATCCTAGGTGAGCCACCGAGGAGCTTCCCTTTGAGCTaGTGTGTGGCTGCTGCTAAGGGACTTCTCATATGT | + |
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Preference number: 6 (lower is better) Translates to: ILGEPPRSFPLS*CVAAAKGLLIC Trigger: ACATATGAGAAGTCCCTTAGCAGCAGCCACACAGCAGCTCAAAGGGAAGCTCCTCGGTGGCTCACCTAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CCA 72 bp | GGCACAGACAAGACTGTCCTTGGGCTCAGTCATGAGTaGGTTCAAACTGGGCATGAGCTTCTTCAGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: GTDKTVLGLSHE*VQTGHELLQQV Trigger: CACCTGCTGAAGAAGCTCATGCCCAGTTTGAACCCACTCATGACTGAGCCCAAGGACAGTCTTGTCTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413501.1 ENST00000669952.1 |
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| CDS CAA 72 bp | GTCCATTCCCACCTGGGATTATCCTCCAAGGTGGACTaGAGAAGCTGTGCTGCCAGTGAGAACCCCCAAATG | + |
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Preference number: 6 (lower is better) Translates to: VHSHLGLSSKVD*RSCAASENPQM Trigger: CATTTGGGGGTTCTCACTGGCAGCACAGCTTCTCAAGTCCACCTTGGAGGATAATCCCAGGTGGGAATGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS TCA 72 bp | GCTTCGAGACACATTTTTCCAATCTCTGCCTCGGTCTaGGGCGGAGATGTTATGTTCCCTCTGCGTGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: ASRHIFPISASV*GGDVMFPLRAC Trigger: ACAGGCACGCAGAGGGAACATAACATCTCCGCCTCAGACCGAGGCAGAGATTGGAAAAATGTGTCTCGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS TCA 72 bp | ATCCTCCAAGGTGGACTTGAGAAGCTGTGCTGCCAGTaGGAACCCCCAAATGTCCAGCCCAAGTTCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: ILQGGLEKLCCQ*EPPNVQPKFLF Trigger: AAAGAGGAACTTGGGCTGGACATTTGGGGGTTCTCACTGGCAGCACAGCTTCTCAAGTCCACCTTGGAGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS TCA 72 bp | TCCATTCCCACCTGGGATTATCCTCCAAGGTGGACTTaGGAAGCTGTGCTGCCAGTGAGAACCCCCAAATGT | + |
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Preference number: 6 (lower is better) Translates to: SIPTWDYPPRWT*EAVLPVRTPKC Trigger: ACATTTGGGGGTTCTCACTGGCAGCACAGCTTCTCAAGTCCACCTTGGAGGATAATCCCAGGTGGGAATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CCA 72 bp | GACATTACCTTTGCCCACCTCCCATGGGTTTGTACCTaGATTCTAGGCAAGGGGAGTGCCACAGAAGACCAA | + |
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Preference number: 6 (lower is better) Translates to: DITFAHLPWVCT*ILGKGSATEDQ Trigger: TTGGTCTTCTGTGGCACTCCCCTTGCCTAGAATCCAGGTACAAACCCATGGGAGGTGGGCAAAGGTAATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CAA 90 bp | GTAGGCCTTCAGCAGGGTTCGGGGTCACTGATGGCACTTCTGGGGTaGCCAGCAGTGTGGGACAGTACCACTATAAGTCAAATATTGAAA | + |
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Preference number: 6 (lower is better) Translates to: VGLQQGSGSLMALLG*PAVWDSTTISQILK Trigger: TTTCAATATTTGACTTATAGTGGTACTGTCCCACACTGCTGGCAACCCCAGAAGTGCCATCAGTGACCCCGAACCCTGCTGAAGGCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000413501.1 ENST00000669952.1 |
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| CDS GCA 72 bp | TCATGGAAGCTGAGACCACAATGTGAAGTGCACAGGTaGCAGGAGAGAAATGTGTGGACGCTCCTTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SWKLRPQCEVHR*QERNVWTLLAE Trigger: TTCTGCAAGGAGCGTCCACACATTTCTCTCCTGGCACCTGTGCACTTCACATTGTGGTCTCAGCTTCCATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CCA 72 bp | GTCCCCACTGTGTGGTTGTTGCTATCTGCATTTAGCTaGTGGAAGGAGAAAGAGATCCCGGAAGAAGCACGT | + |
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Preference number: 6 (lower is better) Translates to: VPTVWLLLSAFS*WKEKEIPEEAR Trigger: ACGTGCTTCTTCCGGGATCTCTTTCTCCTTCCACCAGCTAAATGCAGATAGCAACAACCACACAGTGGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000413501.1 ENST00000657426.1 ENST00000669952.1 |
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| CDS CAA 72 bp | CCCCAGGCTTCACTTCTCTGTGTCCCCACTGTGTGGTaGTTGCTATCTGCATTTAGCTGGTGGAAGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: PQASLLCVPTVW*LLSAFSWWKEK Trigger: TTTCTCCTTCCACCAGCTAAATGCAGATAGCAACAACCACACAGTGGGGACACAGAGAAGTGAAGCCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000413501.1 ENST00000657426.1 ENST00000669952.1 |
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| CDS CAA 72 bp | TTCATAGGACATTACCTTTGCCCACCTCCCATGGGTTaGTACCTGGATTCTAGGCAAGGGGAGTGCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: FIGHYLCPPPMG*YLDSRQGECHR Trigger: TCTGTGGCACTCCCCTTGCCTAGAATCCAGGTACAAACCCATGGGAGGTGGGCAAAGGTAATGTCCTATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS TCA 72 bp | AATTCAACCTACAACAAACGACATCACCAGCAACGGTaGCAGCATCCGCCTCACCTTCAGTCCTTCAACGCA | + |
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Preference number: 6 (lower is better) Translates to: NSTYNKRHHQQR*QHPPHLQSFNA Trigger: TGCGTTGAAGGACTGAAGGTGAGGCGGATGCTGTCACCGTTGCTGGTGATGTCGTTTGTTGTAGGTTGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CCA 72 bp | CATCTAGTCACATGGCCACATCTGGCTACTAGAGAGTaGGAAATATGGTCTAACCACGTGCCTGGCCACATT | + |
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Preference number: 6 (lower is better) Translates to: HLVTWPHLATRE*EIWSNHVPGHI Trigger: AATGTGGCCAGGCACGTGGTTAGACCATATTTCCCACTCTCTAGTAGCCAGATGTGGCCATGTGACTAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413501.1 |
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| CDS CCA 72 bp | CTCCGACATGGAACAAATCACTTCCTCTCACTTCTGTaGGTGACATCTAGTCACATGGCCACATCTGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: LRHGTNHFLSLL*VTSSHMATSGY Trigger: GTAGCCAGATGTGGCCATGTGACTAGATGTCACCCACAGAAGTGAGAGGAAGTGATTTGTTCCATGTCGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413501.1 |
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| CDS CAA 72 bp | CAGGCTTCACTTCTCTGTGTCCCCACTGTGTGGTTGTaGCTATCTGCATTTAGCTGGTGGAAGGAGAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: QASLLCVPTVWL*LSAFSWWKEKE Trigger: CTCTTTCTCCTTCCACCAGCTAAATGCAGATAGCAACAACCACACAGTGGGGACACAGAGAAGTGAAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000413501.1 ENST00000657426.1 ENST00000669952.1 |
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| CDS CAA 90 bp | TGTTCCAAGTTCATAGGACATTACCTTTGCCCACCTCCCATGGGTTaGTACCTGGATTCTAGGCAAGGGGAGTGCCACAGAAGACCAAAA | + |
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Preference number: 6 (lower is better) Translates to: CSKFIGHYLCPPPMG*YLDSRQGECHRRPK Trigger: TTTTGGTCTTCTGTGGCACTCCCCTTGCCTAGAATCCAGGTACAAACCCATGGGAGGTGGGCAAAGGTAATGTCCTATGAACTTGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CAA 90 bp | GCTGCTGTGTGGCTGCTGCTAAGGGACTTCTCATATGTCATAGCATaGCTGCTTAAGGAGGCTGCTAGCTTTACCTTAAACTTGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: AAVWLLLRDFSYVIA*LLKEAASFTLNLLW Trigger: CCACAGCAAGTTTAAGGTAAAGCTAGCAGCCTCCTTAAGCAGCAATGCTATGACATATGAGAAGTCCCTTAGCAGCAGCCACACAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS GCA 72 bp | AGGCTTCACTTCTCTGTGTCCCCACTGTGTGGTTGTTaGTATCTGCATTTAGCTGGTGGAAGGAGAAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: RLHFSVSPLCGC*YLHLAGGRRKR Trigger: TCTCTTTCTCCTTCCACCAGCTAAATGCAGATAGCAACAACCACACAGTGGGGACACAGAGAAGTGAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000413501.1 ENST00000657426.1 ENST00000669952.1 |
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| CDS CAA 90 bp | AGGTCACATTCACAGGGACCTGGGGTTACGACTCCAGCAGATCTTTaGGAAGACACAATTCAACCTACAACAAACGACATCACCAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: RSHSQGPGVTTPADL*EDTIQPTTNDITSN Trigger: GTTGCTGGTGATGTCGTTTGTTGTAGGTTGAATTGTGTCTTCCAAAAGATCTGCTGGAGTCGTAACCCCAGGTCCCTGTGAATGTGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CAA 90 bp | AGGTTGTCACTTCCAGACTCTAATCCCATCAACTCTTTCTCACTATaGATGAGCATCTCTCCTGGTACAGGAAGTAAGGTGAGGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: RLSLPDSNPINSFSL*MSISPGTGSKVRPE Trigger: CTCTGGCCTCACCTTACTTCCTGTACCAGGAGAGATGCTCATCAATAGTGAGAAAGAGTTGATGGGATTAGAGTCTGGAAGTGACAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413501.1 ENST00000657426.1 |
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| CDS GCA 72 bp | GAATCCATTAGCTTCGAGACACATTTTTCCAATCTCTaGCTCGGTCTGAGGCGGAGATGTTATGTTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: ESISFETHFSNL*LGLRRRCYVPS Trigger: AGAGGGAACATAACATCTCCGCCTCAGACCGAGGCAGAGATTGGAAAAATGTGTCTCGAAGCTAATGGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CCA 72 bp | GAGAGAGATGAGGCGCAGGATGGTCCAATGGTTTGTTaGTTAGAGCCAGGTTATGAATCATCACAAAGACTG | + |
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Preference number: 6 (lower is better) Translates to: ERDEAQDGPMVC*LEPGYESSQRL Trigger: CAGTCTTTGTGATGATTCATAACCTGGCTCTAACCAACAAACCATTGGACCATCCTGCGCCTCATCTCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413501.1 ENST00000657426.1 |
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| CDS CAA 72 bp | TGGCTGCTGCTAAGGGACTTCTCATATGTCATAGCATaGCTGCTTAAGGAGGCTGCTAGCTTTACCTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: WLLLRDFSYVIA*LLKEAASFTLN Trigger: GTTTAAGGTAAAGCTAGCAGCCTCCTTAAGCAGCAATGCTATGACATATGAGAAGTCCCTTAGCAGCAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CAA 72 bp | CTTCCAGACTCTAATCCCATCAACTCTTTCTCACTATaGATGAGCATCTCTCCTGGTACAGGAAGTAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LPDSNPINSFSL*MSISPGTGSKV Trigger: CACCTTACTTCCTGTACCAGGAGAGATGCTCATCAATAGTGAGAAAGAGTTGATGGGATTAGAGTCTGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413501.1 ENST00000657426.1 |
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| CDS TCA 72 bp | CCCAATCCCCATCCACATAAGTTGGCGTTTTATAAATaGCGTATGTTGGCCATTGCAGCTTCTGTTGTTATG | + |
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Preference number: 6 (lower is better) Translates to: PNPHPHKLAFYK*RMLAIAASVVM Trigger: CATAACAACAGAAGCTGCAATGGCCAACATACGTCATTTATAAAACGCCAACTTATGTGGATGGGGATTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000413501.1 ENST00000657426.1 |
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| CDS TCA 72 bp | TTAGTAATATGCGATCGAAAAGCCCACTGCAACTCATaGTTTTCCACATTAACCCTAGTGCACAGTCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: LVICDRKAHCNS*FSTLTLVHSQG Trigger: GCCTTGACTGTGCACTAGGGTTAATGTGGAAAATCATGAGTTGCAGTGGGCTTTTCGATCGCATATTACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CAA 90 bp | AACTTGCTGTGGGTCTTTAAAGGGATAATGGTTCATCAATACGGTTaGGAAATAATACCTGAGTTGAGACTACCACCTCCCATCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: NLLWVFKGIMVHQYG*EIIPELRLPPPICR Trigger: TCTGCAGATGGGAGGTGGTAGTCTCAACTCAGGTATTATTTCCAAACCGTATTGATGAACCATTATCCCTTTAAAGACCCACAGCAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CAA 90 bp | GTCATAGCATTGCTGCTTAAGGAGGCTGCTAGCTTTACCTTAAACTaGCTGTGGGTCTTTAAAGGGATAATGGTTCATCAATACGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: VIALLLKEAASFTLN*LWVFKGIMVHQYGL Trigger: CAAACCGTATTGATGAACCATTATCCCTTTAAAGACCCACAGCAAGTTTAAGGTAAAGCTAGCAGCCTCCTTAAGCAGCAATGCTATGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CCA 72 bp | CTTAAGGAGGCTGCTAGCTTTACCTTAAACTTGCTGTaGGTCTTTAAAGGGATAATGGTTCATCAATACGGT | + |
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Preference number: 6 (lower is better) Translates to: LKEAASFTLNLL*VFKGIMVHQYG Trigger: ACCGTATTGATGAACCATTATCCCTTTAAAGACCCACAGCAAGTTTAAGGTAAAGCTAGCAGCCTCCTTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CAA 72 bp | TGGGTCTTTAAAGGGATAATGGTTCATCAATACGGTTaGGAAATAATACCTGAGTTGAGACTACCACCTCCC | + |
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Preference number: 6 (lower is better) Translates to: WVFKGIMVHQYG*EIIPELRLPPP Trigger: GGGAGGTGGTAGTCTCAACTCAGGTATTATTTCCAAACCGTATTGATGAACCATTATCCCTTTAAAGACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS CAA 72 bp | TTGCTGCTTAAGGAGGCTGCTAGCTTTACCTTAAACTaGCTGTGGGTCTTTAAAGGGATAATGGTTCATCAA | + |
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Preference number: 6 (lower is better) Translates to: LLLKEAASFTLN*LWVFKGIMVHQ Trigger: TTGATGAACCATTATCCCTTTAAAGACCCACAGCAAGTTTAAGGTAAAGCTAGCAGCCTCCTTAAGCAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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| CDS TCA 72 bp | GGATGGTCCAATGGTTTGTTGGTTAGAGCCAGGTTATaGATCATCACAAAGACTGAGCCATACCTTATATTA | + |
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Preference number: 6 (lower is better) Translates to: GWSNGLLVRARL*IITKTEPYLIL Trigger: TAATATAAGGTATGGCTCAGTCTTTGTGATGATTCATAACCTGGCTCTAACCAACAAACCATTGGACCATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413501.1 ENST00000657426.1 |
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| CDS CAA 72 bp | ACCCTACTCCAGTATGACCTCATCTTAACTTACACCTaGGTTACATTTGCAAAGACCCCATTTCCAAATAAG | + |
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Preference number: 6 (lower is better) Translates to: TLLQYDLILTYT*VTFAKTPFPNK Trigger: CTTATTTGGAAATGGGGTCTTTGCAAATGTAACCAAGGTGTAAGTTAAGATGAGGTCATACTGGAGTAGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669952.1 |
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