Pregenerated sensors for LINC00462 (Homo sapiens)
Ensembl gene IDs: ENSG00000233610Ensembl transcript IDs: ENST00000425350.1
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCCAACAGAGGTCACCTTTGGTTTCCTGAGGTCCACAGGTGTGGATaGGAAGCATCTGGCCAGGAAACCAGCCTGCCAGAATCCCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: ANRGHLWFPEVHRCG*EASGQETSLPESPE Trigger: CTCTGGGGATTCTGGCAGGCTGGTTTCCTGGCCAGATGCTTCTCATCCACACCTGTGGACCTCAGGAAACCAAAGGTGACCTCTGTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS TCA 90 bp | GAGCGAGCTCCTTGCTGCACTGACCCCTCCCTTCACAGACTTCACTaGGTGCAGGGAGGACACATAGTAAAATGGTGCCACCTCTACTAC | + |
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Preference number: 5 (lower is better) Translates to: ERAPCCTDPSLHRLH*VQGGHIVKWCHLYY Trigger: GTAGTAGAGGTGGCACCATTTTACTATGTGTCCTCCCTGCACTCAGTGAAGTCTGTGAAGGGAGGGGTCAGTGCAGCAAGGAGCTCGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS GCA 90 bp | AGGTCCACAGGTGTGGATGAGAAGCATCTGGCCAGGAAACCAGCCTaGCAGAATCCCCAGAGTGAAGACACTCAAGCAGAAGACAGGATG | + |
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Preference number: 5 (lower is better) Translates to: RSTGVDEKHLARKPA*QNPQSEDTQAEDRM Trigger: CATCCTGTCTTCTGCTTGAGTGTCTTCACTCTGGGGATTCTGGCAGGCTGGTTTCCTGGCCAGATGCTTCTCATCCACACCTGTGGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS TCA 90 bp | CTACTACACAATGATCTGGGTGGCTGCAGCATCTCTGCCTCACCATaGTGTGATGGAGTTTCCCTGCCCCAACCTGCTTGTTTGAGTGTA | + |
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Preference number: 5 (lower is better) Translates to: LLHNDLGGCSISASP*CDGVSLPQPACLSV Trigger: TACACTCAAACAAGCAGGTTGGGGCAGGGAAACTCCATCACATCATGGTGAGGCAGAGATGCTGCAGCCACCCAGATCATTGTGTAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CCA 90 bp | CCTGCCAGAATCCCCAGAGTGAAGACACTCAAGCAGAAGACAGGATaGCTCCTCAGCGTTACTCTGGCCAGTGATCAAATTTTCAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: PARIPRVKTLKQKTG*LLSVTLASDQIFRV Trigger: AACCCTGAAAATTTGATCACTGGCCAGAGTAACGCTGAGGAGCCATCCTGTCTTCTGCTTGAGTGTCTTCACTCTGGGGATTCTGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CCA 90 bp | GATGGAGTTTCCCTGCCCCAACCTGCTTGTTTGAGTGTATGGTTCTaGTGTGGATGTTCGCTCAATTTCCACATCTCATGGGCATTGGTG | + |
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Preference number: 5 (lower is better) Translates to: DGVSLPQPACLSVWF*CGCSLNFHISWALV Trigger: CACCAATGCCCATGAGATGTGGAAATTGAGCGAACATCCACACCAGAACCATACACTCAAACAAGCAGGTTGGGGCAGGGAAACTCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS TCA 90 bp | CCTCACCATGATGTGATGGAGTTTCCCTGCCCCAACCTGCTTGTTTaGGTGTATGGTTCTGGTGTGGATGTTCGCTCAATTTCCACATCT | + |
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Preference number: 5 (lower is better) Translates to: PHHDVMEFPCPNLLV*VYGSGVDVRSISTS Trigger: AGATGTGGAAATTGAGCGAACATCCACACCAGAACCATACACTCAAACAAGCAGGTTGGGGCAGGGAAACTCCATCACATCATGGTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CCA 90 bp | AGTTTCCCTGCCCCAACCTGCTTGTTTGAGTGTATGGTTCTGGTGTaGATGTTCGCTCAATTTCCACATCTCATGGGCATTGGTGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: SFPAPTCLFECMVLV*MFAQFPHLMGIGGK Trigger: CTTTCCACCAATGCCCATGAGATGTGGAAATTGAGCGAACATCCACACCAGAACCATACACTCAAACAAGCAGGTTGGGGCAGGGAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CCA 90 bp | GGAGGACACATAGTAAAATGGTGCCACCTCTACTACACAATGATCTaGGTGGCTGCAGCATCTCTGCCTCACCATGATGTGATGGAGTTT | + |
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Preference number: 5 (lower is better) Translates to: GGHIVKWCHLYYTMI*VAAASLPHHDVMEF Trigger: AAACTCCATCACATCATGGTGAGGCAGAGATGCTGCAGCCACCCAGATCATTGTGTAGTAGAGGTGGCACCATTTTACTATGTGTCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS GCA 90 bp | ACTCTGGCCAGTGATCAAATTTTCAGGGTTTGTGGAGCAATTAATTaGTTCATACACATGCTGGGCCACGTTCTTCAGAATGAGGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: TLASDQIFRVCGAIN*FIHMLGHVLQNEAG Trigger: ACCTGCCTCATTCTGAAGAACGTGGCCCAGCATGTGTATGAAGCAATTAATTGCTCCACAAACCCTGAAAATTTGATCACTGGCCAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS GCA 90 bp | CACCAGGCTGGAAGCTATGGGAAGAAAGGGCTATTGCATTTCCTTTaGCTAGAAAAGTGCTTGGCATATAGTAGGTTTTTCTCAAATATT | + |
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Preference number: 5 (lower is better) Translates to: HQAGSYGKKGLLHFL*LEKCLAYSRFFSNI Trigger: AATATTTGAGAAAAACCTACTATATGCCAAGCACTTTTCTAGGCAAAGGAAATGCAATAGCCCTTTCTTCCCATAGCTTCCAGCCTGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS TCA 72 bp | GGTCACCTTTGGTTTCCTGAGGTCCACAGGTGTGGATaGGAAGCATCTGGCCAGGAAACCAGCCTGCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: GHLWFPEVHRCG*EASGQETSLPE Trigger: TTCTGGCAGGCTGGTTTCCTGGCCAGATGCTTCTCATCCACACCTGTGGACCTCAGGAAACCAAAGGTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS TCA 72 bp | TCTGGGTGGCTGCAGCATCTCTGCCTCACCATGATGTaGTGGAGTTTCCCTGCCCCAACCTGCTTGTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: SGWLQHLCLTMM*WSFPAPTCLFE Trigger: CTCAAACAAGCAGGTTGGGGCAGGGAAACTCCATCACATCATGGTGAGGCAGAGATGCTGCAGCCACCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS TCA 72 bp | TCAAGGCCATGCCAACAGAGGTCACCTTTGGTTTCCTaGGGTCCACAGGTGTGGATGAGAAGCATCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SRPCQQRSPLVS*GPQVWMRSIWP Trigger: TGGCCAGATGCTTCTCATCCACACCTGTGGACCTCAGGAAACCAAAGGTGACCTCTGTTGGCATGGCCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS TCA 72 bp | AATGATCTGGGTGGCTGCAGCATCTCTGCCTCACCATaGTGTGATGGAGTTTCCCTGCCCCAACCTGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: NDLGGCSISASP*CDGVSLPQPAC Trigger: ACAAGCAGGTTGGGGCAGGGAAACTCCATCACATCATGGTGAGGCAGAGATGCTGCAGCCACCCAGATCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS TCA 72 bp | CCTTGCTGCACTGACCCCTCCCTTCACAGACTTCACTaGGTGCAGGGAGGACACATAGTAAAATGGTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: PCCTDPSLHRLH*VQGGHIVKWCH Trigger: GTGGCACCATTTTACTATGTGTCCTCCCTGCACTCAGTGAAGTCTGTGAAGGGAGGGGTCAGTGCAGCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS GCA 72 bp | GGTGTGGATGAGAAGCATCTGGCCAGGAAACCAGCCTaGCAGAATCCCCAGAGTGAAGACACTCAAGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: GVDEKHLARKPA*QNPQSEDTQAE Trigger: TTCTGCTTGAGTGTCTTCACTCTGGGGATTCTGGCAGGCTGGTTTCCTGGCCAGATGCTTCTCATCCACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CCA 72 bp | AAGGAACCAGTTGTTCTTAGTGGGAGAAGAGAGCCGTaGGACCGATTTGACTTTTCTCCCAGAGAGCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: KEPVVLSGRREP*DRFDFSPREQV Trigger: AACCTGCTCTCTGGGAGAAAAGTCAAATCGGTCCCACGGCTCTCTTCTCCCACTAAGAACAACTGGTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CAA 72 bp | TTGTTCTTAGTGGGAGAAGAGAGCCGTGGGACCGATTaGACTTTTCTCCCAGAGAGCAGGTTCTCCATTTGC | + |
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Preference number: 6 (lower is better) Translates to: LFLVGEESRGTD*TFLPESRFSIC Trigger: GCAAATGGAGAACCTGCTCTCTGGGAGAAAAGTCAAATCGGTCCCACGGCTCTCTTCTCCCACTAAGAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CAA 90 bp | AGGAACCAGTTGTTCTTAGTGGGAGAAGAGAGCCGTGGGACCGATTaGACTTTTCTCCCAGAGAGCAGGTTCTCCATTTGCAAGACTGAT | + |
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Preference number: 6 (lower is better) Translates to: RNQLFLVGEESRGTD*TFLPESRFSICKTD Trigger: ATCAGTCTTGCAAATGGAGAACCTGCTCTCTGGGAGAAAAGTCAAATCGGTCCCACGGCTCTCTTCTCCCACTAAGAACAACTGGTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS TCA 72 bp | GATGTGATGGAGTTTCCCTGCCCCAACCTGCTTGTTTaGGTGTATGGTTCTGGTGTGGATGTTCGCTCAATT | + |
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Preference number: 6 (lower is better) Translates to: DVMEFPCPNLLV*VYGSGVDVRSI Trigger: AATTGAGCGAACATCCACACCAGAACCATACACTCAAACAAGCAGGTTGGGGCAGGGAAACTCCATCACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CCA 72 bp | TCAAGCAGAAGACAGGATGGCTCCTCAGCGTTACTCTaGCCAGTGATCAAATTTTCAGGGTTTGTGGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: SSRRQDGSSALL*PVIKFSGFVEQ Trigger: TTGCTCCACAAACCCTGAAAATTTGATCACTGGCCAGAGTAACGCTGAGGAGCCATCCTGTCTTCTGCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CCA 72 bp | TTCTGGTGTGGATGTTCGCTCAATTTCCACATCTCATaGGCATTGGTGGAAAGGAAGTCAAGGCCATGCCAA | + |
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Preference number: 6 (lower is better) Translates to: FWCGCSLNFHIS*ALVERKSRPCQ Trigger: TTGGCATGGCCTTGACTTCCTTTCCACCAATGCCCATGAGATGTGGAAATTGAGCGAACATCCACACCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CCA 72 bp | GCCCCAACCTGCTTGTTTGAGTGTATGGTTCTGGTGTaGATGTTCGCTCAATTTCCACATCTCATGGGCATT | + |
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Preference number: 6 (lower is better) Translates to: APTCLFECMVLV*MFAQFPHLMGI Trigger: AATGCCCATGAGATGTGGAAATTGAGCGAACATCCACACCAGAACCATACACTCAAACAAGCAGGTTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CCA 72 bp | ATAGTAAAATGGTGCCACCTCTACTACACAATGATCTaGGTGGCTGCAGCATCTCTGCCTCACCATGATGTG | + |
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Preference number: 6 (lower is better) Translates to: IVKWCHLYYTMI*VAAASLPHHDV Trigger: CACATCATGGTGAGGCAGAGATGCTGCAGCCACCCAGATCATTGTGTAGTAGAGGTGGCACCATTTTACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CAA 72 bp | GGGAATAACACATCTTCTTCTGAAGGAAGGAACCAGTaGTTCTTAGTGGGAGAAGAGAGCCGTGGGACCGAT | + |
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Preference number: 6 (lower is better) Translates to: GNNTSSSEGRNQ*FLVGEESRGTD Trigger: ATCGGTCCCACGGCTCTCTTCTCCCACTAAGAACAACTGGTTCCTTCCTTCAGAAGAAGATGTGTTATTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CAA 72 bp | AATGAGGCAGGTCACATCTCCGAATTCTTAACCCTTTaGGAATCCAGGCGCTCACCACTACTGGTGGGAATA | + |
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Preference number: 6 (lower is better) Translates to: NEAGHISEFLTL*ESRRSPLLVGI Trigger: TATTCCCACCAGTAGTGGTGAGCGCCTGGATTCCAAAAGGGTTAAGAATTCGGAGATGTGACCTGCCTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CAA 72 bp | CCCCACCAGGCTGGAAGCTATGGGAAGAAAGGGCTATaGCATTTCCTTTGCCTAGAAAAGTGCTTGGCATAT | + |
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Preference number: 6 (lower is better) Translates to: PHQAGSYGKKGL*HFLCLEKCLAY Trigger: ATATGCCAAGCACTTTTCTAGGCAAAGGAAATGCAATAGCCCTTTCTTCCCATAGCTTCCAGCCTGGTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CAA 90 bp | GTTCTTCAGAATGAGGCAGGTCACATCTCCGAATTCTTAACCCTTTaGGAATCCAGGCGCTCACCACTACTGGTGGGAATAACACATCTT | + |
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Preference number: 6 (lower is better) Translates to: VLQNEAGHISEFLTL*ESRRSPLLVGITHL Trigger: AAGATGTGTTATTCCCACCAGTAGTGGTGAGCGCCTGGATTCCAAAAGGGTTAAGAATTCGGAGATGTGACCTGCCTCATTCTGAAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CAA 90 bp | ACTACTGGTGGGAATAACACATCTTCTTCTGAAGGAAGGAACCAGTaGTTCTTAGTGGGAGAAGAGAGCCGTGGGACCGATTTGACTTTT | + |
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Preference number: 6 (lower is better) Translates to: TTGGNNTSSSEGRNQ*FLVGEESRGTDLTF Trigger: AAAAGTCAAATCGGTCCCACGGCTCTCTTCTCCCACTAAGAACAACTGGTTCCTTCCTTCAGAAGAAGATGTGTTATTCCCACCAGTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS TCA 72 bp | TTGCTTCATACACATGCTGGGCCACGTTCTTCAGAATaGGGCAGGTCACATCTCCGAATTCTTAACCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: LLHTHAGPRSSE*GRSHLRILNPF Trigger: AAAAGGGTTAAGAATTCGGAGATGTGACCTGCCTCATTCTGAAGAACGTGGCCCAGCATGTGTATGAAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CAA 90 bp | TCCTTTATTCCCCACCAGGCTGGAAGCTATGGGAAGAAAGGGCTATaGCATTTCCTTTGCCTAGAAAAGTGCTTGGCATATAGTAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SFIPHQAGSYGKKGL*HFLCLEKCLAYSRF Trigger: AAACCTACTATATGCCAAGCACTTTTCTAGGCAAAGGAAATGCAATAGCCCTTTCTTCCCATAGCTTCCAGCCTGGTGGGGAATAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS GCA 72 bp | GGAAGCTATGGGAAGAAAGGGCTATTGCATTTCCTTTaGCTAGAAAAGTGCTTGGCATATAGTAGGTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: GSYGKKGLLHFL*LEKCLAYSRFF Trigger: GAAAAACCTACTATATGCCAAGCACTTTTCTAGGCAAAGGAAATGCAATAGCCCTTTCTTCCCATAGCTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS GCA 72 bp | AGTGATCAAATTTTCAGGGTTTGTGGAGCAATTAATTaGTTCATACACATGCTGGGCCACGTTCTTCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: SDQIFRVCGAIN*FIHMLGHVLQN Trigger: ATTCTGAAGAACGTGGCCCAGCATGTGTATGAAGCAATTAATTGCTCCACAAACCCTGAAAATTTGATCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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| CDS CAA 90 bp | TATGGGAAGAAAGGGCTATTGCATTTCCTTTGCCTAGAAAAGTGCTaGGCATATAGTAGGTTTTTCTCAAATATTTATAGAAGGAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: YGKKGLLHFLCLEKC*AYSRFFSNIYRRSE Trigger: TTCACTCCTTCTATAAATATTTGAGAAAAACCTACTATATGCCAAGCACTTTTCTAGGCAAAGGAAATGCAATAGCCCTTTCTTCCCATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425350.1 |
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