Pregenerated sensors for LINC00460 (Homo sapiens)
Ensembl gene IDs: ENSG00000233532Ensembl transcript IDs: ENST00000435024.2, ENST00000439790.6, ENST00000444865.2, ENST00000642946.1, ENST00000643760.1, ENST00000644746.1, ENST00000647525.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGTGCAATGGACATTCTGGGCCAGGTAATGCTGTGCCGTGCGGGCTaGCCCGGGCACTGTGCGAGGCACAGCGGCACCCTGGCTCTACCC | + |
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Preference number: 5 (lower is better) Translates to: SAMDILGQVMLCRAG*PGHCARHSGTLALP Trigger: GGGTAGAGCCAGGGTGCCGCTGTGCCTCGCACAGTGCCCGGGGCAGCCCGCACGGCACAGCATTACCTGGCCCAGAATGTCCATTGCACT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643760.1 |
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| CDS CCA 90 bp | TCTGGGTACCTCCGATGTCCTGGCGAGGCACATAGCGTCCTGGCATaGAGAGGCGAGCGCTGGGGTCCGGCCTGCTGGAAAGGAAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: SGYLRCPGEAHSVLA*RGERWGPACWKGRR Trigger: TCTTCTTCCTTTCCAGCAGGCCGGACCCCAGCGCTCGCCTCTCCATGCCAGGACGCTATGTGCCTCGCCAGGACATCGGAGGTACCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643760.1 |
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| CDS CCA 90 bp | AGCAGAGAGCAGCATCGGGCCAGGTCCAGTGCCTCAGTCAGGAGCTaGGCAAGAGTAGCCCAGAGTGTGCACAGATCCTCGGGCTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SREQHRARSSASVRS*ARVAQSVHRSSGFS Trigger: GGAAAAGCCCGAGGATCTGTGCACACTCTGGGCTACTCTTGCCCAGCTCCTGACTGAGGCACTGGACCTGGCCCGATGCTGCTCTCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000435024.2 ENST00000642946.1 |
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| CDS TCA 90 bp | AGGCTGGAAGTCCAGGATCAGGGTGCCAGCACAACTGGGTTCTGGTaGGGGCCCACGTTCTGGCTCATAGGTGGCCTTCTCGCTGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: RLEVQDQGASTTGFW*GPTFWLIGGLLAVF Trigger: GAACACAGCGAGAAGGCCACCTATGAGCCAGAACGTGGGCCCTCACCAGAACCCAGTTGTGCTGGCACCCTGATCCTGGACTTCCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 |
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| CDS GCA 90 bp | GCTGGCAATGGTGGTTCATCCAGGGTGACTCTTAGCCGAGAAGTGTaGATGCTGGGTCCAGCAGCGTCCACCAGGGGCACATGCGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: AGNGGSSRVTLSREV*MLGPAASTRGTCGV Trigger: AACTCCGCATGTGCCCCTGGTGGACGCTGCTGGACCCAGCATGCACACTTCTCGGCTAAGAGTCACCCTGGATGAACCACCATTGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000435024.2 ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 ENST00000647525.1 |
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| CDS CCA 90 bp | GTGTTCTCAGCTGGGCTGGCTGATTCACTGCATTCAGCTGAGTGTTaGGCAGAGCTGGAAGGTTCAGGCAGGCCTTACCCACCTGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: VFSAGLADSLHSAEC*AELEGSGRPYPPVW Trigger: CCAGACAGGTGGGTAAGGCCTGCCTGAACCTTCCAGCTCTGCCCAACACTCAGCTGAATGCAGTGAATCAGCCAGCCCAGCTGAGAACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644746.1 ENST00000647525.1 |
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| CDS GCA 90 bp | ACAGACGCCTCCCACACAATGGTCGTAACCTTCGTTCTCATCCACTaGGTGGGAAAGCTGCAACATGCTCCCCGCTGGCAATGGTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: TDASHTMVVTFVLIH*VGKLQHAPRWQWWF Trigger: GAACCACCATTGCCAGCGGGGAGCATGTTGCAGCTTTCCCACGCAGTGGATGAGAACGAAGGTTACGACCATTGTGTGGGAGGCGTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000435024.2 ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 ENST00000647525.1 |
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| CDS GCA 90 bp | CAGAACCTCTGCTCACTGTGTTCTCAGCTGGGCTGGCTGATTCACTaGATTCAGCTGAGTGTTGGGCAGAGCTGGAAGGTTCAGGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: QNLCSLCSQLGWLIH*IQLSVGQSWKVQAG Trigger: GCCTGCCTGAACCTTCCAGCTCTGCCCAACACTCAGCTGAATGCAGTGAATCAGCCAGCCCAGCTGAGAACACAGTGAGCAGAGGTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644746.1 ENST00000647525.1 |
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| CDS CCA 90 bp | AAGTCCAAGGAGAAGCCTCACCCGCATAGCTCATTTTGGGAAAGCTaGCCTGCCCTGCCACAAAGAGGTGCTGGGGAAGTGTGTCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: KSKEKPHPHSSFWES*PALPQRGAGEVCQL Trigger: CAGCTGACACACTTCCCCAGCACCTCTTTGTGGCAGGGCAGGCCAGCTTTCCCAAAATGAGCTATGCGGGTGAGGCTTCTCCTTGGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643760.1 |
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| CDS TCA 90 bp | GGTCCCCGAATGAGCCTCTCAGCCGACTCCTCCTTAGCTTGTTGCTaGTCCTGTCCCAGGATTAACATAGACCAGGGTCTCTCAACCTCA | + |
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Preference number: 5 (lower is better) Translates to: GPRMSLSADSSLACC*SCPRINIDQGLSTS Trigger: TGAGGTTGAGAGACCCTGGTCTATGTTAATCCTGGGACAGGATCAGCAACAAGCTAAGGAGGAGTCGGCTGAGAGGCTCATTCGGGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643760.1 |
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| CDS GCA 90 bp | AACTTCTTTGTCGTCATTTTGGAGGCTGGAAGTCCAGGATCAGGGTaGCAGCACAACTGGGTTCTGGTGAGGGCCCACGTTCTGGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: NFFVVILEAGSPGSG*QHNWVLVRAHVLAH Trigger: ATGAGCCAGAACGTGGGCCCTCACCAGAACCCAGTTGTGCTGGCACCCTGATCCTGGACTTCCAGCCTCCAAAATGACGACAAAGAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 |
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| CDS GCA 90 bp | TCTCTGGATTCTGTGGGTCTGGAATCCAGGCAGGATCAGAACCTCTaGTCACTGTGTTCTCAGCTGGGCTGGCTGATTCACTGCATTCAG | + |
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Preference number: 5 (lower is better) Translates to: SLDSVGLESRQDQNL*SLCSQLGWLIHCIQ Trigger: CTGAATGCAGTGAATCAGCCAGCCCAGCTGAGAACACAGTGAGCAGAGGTTCTGATCCTGCCTGGATTCCAGACCCACAGAATCCAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644746.1 ENST00000647525.1 |
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| CDS TCA 90 bp | CTTTGGTCATGGGGTGCAGCATGTACACAAAGAAAGGTAAGGAATTaGTGGCCGCCGTCTTGGTTGACTGGCTACCACCCAGTGTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: LWSWGAACTQRKVRN*WPPSWLTGYHPVCF Trigger: GAAACACACTGGGTGGTAGCCAGTCAACCAAGACGGCGGCCATCAATTCCTTACCTTTCTTTGTGTACATGCTGCACCCCATGACCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000644746.1 ENST00000647525.1 |
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| CDS CCA 90 bp | TTTCTGCAGCATGATGTGGTAGAAGGAAGCCTGGAAAAAGTGTCTTaGGTCATGAGTCCCCCACTCACTTGCTGTGTGGTCTTGGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: FLQHDVVEGSLEKVS*VMSPPLTCCVVLGK Trigger: CTTGCCCAAGACCACACAGCAAGTGAGTGGGGGACTCATGACCCAAGACACTTTTTCCAGGCTTCCTTCTACCACATCATGCTGCAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000435024.2 ENST00000642946.1 |
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| CDS GCA 90 bp | TCCCACGCTCAGTCTTTCTACAATGCCACAAGTGATTCCAGCAATTaGTACACAGACGCCTCCCACACAATGGTCGTAACCTTCGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: SHAQSFYNATSDSSN*YTDASHTMVVTFVL Trigger: GAGAACGAAGGTTACGACCATTGTGTGGGAGGCGTCTGTGTAGCAATTGCTGGAATCACTTGTGGCATTGTAGAAAGACTGAGCGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 |
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| CDS TCA 90 bp | AATGCGTCTTCTTTCCCACGCTCAGTCTTTCTACAATGCCACAAGTaGTTCCAGCAATTGCTACACAGACGCCTCCCACACAATGGTCGT | + |
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Preference number: 5 (lower is better) Translates to: NASSFPRSVFLQCHK*FQQLLHRRLPHNGR Trigger: ACGACCATTGTGTGGGAGGCGTCTGTGTAGCAATTGCTGGAATCACTTGTGGCATTGTAGAAAGACTGAGCGTGGGAAAGAAGACGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 |
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| CDS TCA 90 bp | AACCACATGCCTCGTCTCTTCCCATCTGCTGTGTTTTCTGCAGCATaGTGTGGTAGAAGGAAGCCTGGAAAAAGTGTCTTGGGTCATGAG | + |
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Preference number: 5 (lower is better) Translates to: NHMPRLFPSAVFSAA*CGRRKPGKSVLGHE Trigger: CTCATGACCCAAGACACTTTTTCCAGGCTTCCTTCTACCACATCATGCTGCAGAAAACACAGCAGATGGGAAGAGACGAGGCATGTGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000435024.2 ENST00000642946.1 |
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| CDS CCA 90 bp | TTGAAGTGGATGGCTCAGGAAAAACAAACTTCTTTGTCGTCATTTTaGAGGCTGGAAGTCCAGGATCAGGGTGCCAGCACAACTGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: LKWMAQEKQTSLSSF*RLEVQDQGASTTGF Trigger: GAACCCAGTTGTGCTGGCACCCTGATCCTGGACTTCCAGCCTCCAAAATGACGACAAAGAAGTTTGTTTTTCCTGAGCCATCCACTTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 |
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| CDS CCA 90 bp | GAGCCACTCACCTCCCAAAGGCCCCATCTATTAATACTATCTTATTaGCTATTAGGTCTTAGCATACGAATTTGGGTGGGGGACATAAAC | + |
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Preference number: 5 (lower is better) Translates to: EPLTSQRPHLLILSY*LLGLSIRIWVGDIN Trigger: GTTTATGTCCCCCACCCAAATTCGTATGCTAAGACCTAATAGCCAATAAGATAGTATTAATAGATGGGGCCTTTGGGAGGTGAGTGGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 |
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| CDS TCA 90 bp | TTTTCTTTATTGCCTTGTAAAATAGCTTGCCTGTCACATTATAGCTaGATTTCCAGCCTGCTGGCTTTCTCTGCAGATTTCAGATTTCCA | + |
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Preference number: 5 (lower is better) Translates to: FSLLPCKIACLSHYS*ISSLLAFSADFRFP Trigger: TGGAAATCTGAAATCTGCAGAGAAAGCCAGCAGGCTGGAAATTCAGCTATAATGTGACAGGCAAGCTATTTTACAAGGCAATAAAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647525.1 |
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| CDS CCA 72 bp | GGTACCTCCGATGTCCTGGCGAGGCACATAGCGTCCTaGCATGGAGAGGCGAGCGCTGGGGTCCGGCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GTSDVLARHIAS*HGEASAGVRPA Trigger: AGCAGGCCGGACCCCAGCGCTCGCCTCTCCATGCCAGGACGCTATGTGCCTCGCCAGGACATCGGAGGTACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643760.1 |
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| CDS CCA 72 bp | CTCCGATGTCCTGGCGAGGCACATAGCGTCCTGGCATaGAGAGGCGAGCGCTGGGGTCCGGCCTGCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: LRCPGEAHSVLA*RGERWGPACWK Trigger: TTTCCAGCAGGCCGGACCCCAGCGCTCGCCTCTCCATGCCAGGACGCTATGTGCCTCGCCAGGACATCGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643760.1 |
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| CDS GCA 72 bp | GGGCAGCAGCAGAGAGCAGCATCGGGCCAGGTCCAGTaGCTCAGTCAGGAGCTGGGCAAGAGTAGCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: GQQQRAASGQVQ*LSQELGKSSPE Trigger: CTCTGGGCTACTCTTGCCCAGCTCCTGACTGAGGCACTGGACCTGGCCCGATGCTGCTCTCTGCTGCTGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000435024.2 ENST00000642946.1 |
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| CDS CCA 72 bp | CAGCATCGGGCCAGGTCCAGTGCCTCAGTCAGGAGCTaGGCAAGAGTAGCCCAGAGTGTGCACAGATCCTCG | + |
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Preference number: 6 (lower is better) Translates to: QHRARSSASVRS*ARVAQSVHRSS Trigger: CGAGGATCTGTGCACACTCTGGGCTACTCTTGCCCAGCTCCTGACTGAGGCACTGGACCTGGCCCGATGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000435024.2 ENST00000642946.1 |
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| CDS CCA 72 bp | GAGGCACATAGCGTCCTGGCATGGAGAGGCGAGCGCTaGGGTCCGGCCTGCTGGAAAGGAAGAAGAATGGAG | + |
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Preference number: 6 (lower is better) Translates to: EAHSVLAWRGER*GPACWKGRRME Trigger: CTCCATTCTTCTTCCTTTCCAGCAGGCCGGACCCCAGCGCTCGCCTCTCCATGCCAGGACGCTATGTGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643760.1 |
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| CDS TCA 72 bp | GTCCAGGATCAGGGTGCCAGCACAACTGGGTTCTGGTaGGGGCCCACGTTCTGGCTCATAGGTGGCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: VQDQGASTTGFW*GPTFWLIGGLL Trigger: GAGAAGGCCACCTATGAGCCAGAACGTGGGCCCTCACCAGAACCCAGTTGTGCTGGCACCCTGATCCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 |
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| CDS GCA 72 bp | GGTGGTTCATCCAGGGTGACTCTTAGCCGAGAAGTGTaGATGCTGGGTCCAGCAGCGTCCACCAGGGGCACA | + |
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Preference number: 6 (lower is better) Translates to: GGSSRVTLSREV*MLGPAASTRGT Trigger: TGTGCCCCTGGTGGACGCTGCTGGACCCAGCATGCACACTTCTCGGCTAAGAGTCACCCTGGATGAACCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000435024.2 ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 ENST00000647525.1 |
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| CDS CCA 72 bp | GAGGCTGGAAGTCCAGGATCAGGGTGCCAGCACAACTaGGTTCTGGTGAGGGCCCACGTTCTGGCTCATAGG | + |
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Preference number: 6 (lower is better) Translates to: EAGSPGSGCQHN*VLVRAHVLAHR Trigger: CCTATGAGCCAGAACGTGGGCCCTCACCAGAACCCAGTTGTGCTGGCACCCTGATCCTGGACTTCCAGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 |
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| CDS TCA 72 bp | CCTCTCATAGGTCTCGGTCCCCCAGGTTTGAGGAGATaGGTCCCCCTGGCTGAGGCATTTCTAACAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PLIGLGPPGLRR*VPLAEAFLTGL Trigger: CAGCCCTGTTAGAAATGCCTCAGCCAGGGGGACTCATCTCCTCAAACCTGGGGGACCGAGACCTATGAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000435024.2 ENST00000642946.1 ENST00000647525.1 |
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| CDS CCA 72 bp | GCTGGGCTGGCTGATTCACTGCATTCAGCTGAGTGTTaGGCAGAGCTGGAAGGTTCAGGCAGGCCTTACCCA | + |
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Preference number: 6 (lower is better) Translates to: AGLADSLHSAEC*AELEGSGRPYP Trigger: TGGGTAAGGCCTGCCTGAACCTTCCAGCTCTGCCCAACACTCAGCTGAATGCAGTGAATCAGCCAGCCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644746.1 ENST00000647525.1 |
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| CDS TCA 72 bp | CTTGGGAGGCTGACATGGCAGAATCACTTGAGCCCATaGGTTCAAGAGCAGCCTGGGCAGAAGAGTGAGACC | + |
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Preference number: 6 (lower is better) Translates to: LGRLTWQNHLSP*VQEQPGQKSET Trigger: GGTCTCACTCTTCTGCCCAGGCTGCTCTTGAACTCATGGGCTCAAGTGATTCTGCCATGTCAGCCTCCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643760.1 |
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| CDS CCA 72 bp | AGCGCTGGGGTCCGGCCTGCTGGAAAGGAAGAAGAATaGAGAAGAAGGAGGAAAGTCCAAGGAGAAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SAGVRPAGKEEE*RRRRKVQGEAS Trigger: TGAGGCTTCTCCTTGGACTTTCCTCCTTCTTCTCCATTCTTCTTCCTTTCCAGCAGGCCGGACCCCAGCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643760.1 |
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| CDS TCA 72 bp | CAGAGGGGTCTCCAGACGTGGCCAAATGAGAAGCACTaGTTAAGACCTATTCCTAGGCCAGGCATGGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: QRGLQTWPNEKH*LRPIPRPGMVP Trigger: AGGCACCATGCCTGGCCTAGGAATAGGTCTTAATCAGTGCTTCTCATTTGGCCACGTCTGGAGACCCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643760.1 |
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| CDS GCA 72 bp | TGCTCACTGTGTTCTCAGCTGGGCTGGCTGATTCACTaGATTCAGCTGAGTGTTGGGCAGAGCTGGAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: CSLCSQLGWLIH*IQLSVGQSWKV Trigger: AACCTTCCAGCTCTGCCCAACACTCAGCTGAATGCAGTGAATCAGCCAGCCCAGCTGAGAACACAGTGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644746.1 ENST00000647525.1 |
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| CDS TCA 72 bp | TGGGGTGCAGCATGTACACAAAGAAAGGTAAGGAATTaGTGGCCGCCGTCTTGGTTGACTGGCTACCACCCA | + |
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Preference number: 6 (lower is better) Translates to: WGAACTQRKVRN*WPPSWLTGYHP Trigger: TGGGTGGTAGCCAGTCAACCAAGACGGCGGCCATCAATTCCTTACCTTTCTTTGTGTACATGCTGCACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000644746.1 ENST00000647525.1 |
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| CDS TCA 72 bp | ATGAGCCTCTCAGCCGACTCCTCCTTAGCTTGTTGCTaGTCCTGTCCCAGGATTAACATAGACCAGGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: MSLSADSSLACC*SCPRINIDQGL Trigger: GAGACCCTGGTCTATGTTAATCCTGGGACAGGATCAGCAACAAGCTAAGGAGGAGTCGGCTGAGAGGCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643760.1 |
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| CDS CAA 90 bp | CCTTTGGTCATGGGGTGCAGCATGTACACAAAGAAAGGTAAGGAATaGATGGCCGCCGTCTTGGTTGACTGGCTACCACCCAGTGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: PLVMGCSMYTKKGKE*MAAVLVDWLPPSVF Trigger: AAACACACTGGGTGGTAGCCAGTCAACCAAGACGGCGGCCATCAATTCCTTACCTTTCTTTGTGTACATGCTGCACCCCATGACCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000644746.1 ENST00000647525.1 |
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| CDS TCA 72 bp | TCGGGCACTTATCTGGTTTTGAGGACTCTGCCCTCATaGGCCACTCACCTCCCAAAGGCCCCATCTATTAAT | + |
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Preference number: 6 (lower is better) Translates to: SGTYLVLRTLPS*ATHLPKAPSIN Trigger: ATTAATAGATGGGGCCTTTGGGAGGTGAGTGGCTCATGAGGGCAGAGTCCTCAAAACCAGATAAGTGCCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 |
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| CDS TCA 72 bp | TCCCCAAAATGTGGAACTTTGGTATTGCAGGTTCGCTaGGCCCAGAAAGCTTGCTGTGTGGTCTTGGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: SPKCGTLVLQVR*AQKACCVVLGK Trigger: CTTGCCCAAGACCACACAGCAAGCTTTCTGGGCTCAGCGAACCTGCAATACCAAAGTTCCACATTTTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647525.1 |
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| CDS GCA 72 bp | AAATCCCAGCTACTTGGTCAGCTGAGGCTGGAGGATTaGTTGAGCTCCAGAGGTAGAAGCTGCAGTAAGCTA | + |
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Preference number: 6 (lower is better) Translates to: KSQLLGQLRLED*LSSRGRSCSKL Trigger: TAGCTTACTGCAGCTTCTACCTCTGGAGCTCAAGCAATCCTCCAGCCTCAGCTGACCAAGTAGCTGGGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643760.1 |
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| CDS CCA 72 bp | CATGATGTGGTAGAAGGAAGCCTGGAAAAAGTGTCTTaGGTCATGAGTCCCCCACTCACTTGCTGTGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: HDVVEGSLEKVS*VMSPPLTCCVV Trigger: GACCACACAGCAAGTGAGTGGGGGACTCATGACCCAAGACACTTTTTCCAGGCTTCCTTCTACCACATCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000435024.2 ENST00000642946.1 |
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| CDS CCA 72 bp | AGCAATTGTACAGAGACAAGGGCCCTAATGATTAACTaGGTACAGTGTTGCCGGTGGAGCAGAAGAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SNCTETRALMIN*VQCCRWSRRAG Trigger: CCCAGCTCTTCTGCTCCACCGGCAACACTGTACCCAGTTAATCATTAGGGCCCTTGTCTCTGTACAATTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000435024.2 ENST00000642946.1 |
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| CDS GCA 72 bp | CCGTCTTGGTTGACTGGCTACCACCCAGTGTGTTTCTaGAACAATAAACCTCGCCAACCAAGGTATCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: PSWLTGYHPVCF*NNKPRQPRYLE Trigger: CTCAAGATACCTTGGTTGGCGAGGTTTATTGTTGCAGAAACACACTGGGTGGTAGCCAGTCAACCAAGACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644746.1 ENST00000647525.1 |
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| CDS CAA 72 bp | GATGGCTCAGGAAAAACAAACTTCTTTGTCGTCATTTaGGAGGCTGGAAGTCCAGGATCAGGGTGCCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: DGSGKTNFFVVI*EAGSPGSGCQH Trigger: GTGCTGGCACCCTGATCCTGGACTTCCAGCCTCCAAAATGACGACAAAGAAGTTTGTTTTTCCTGAGCCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 |
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| CDS TCA 72 bp | CCTCGTCTCTTCCCATCTGCTGTGTTTTCTGCAGCATaGTGTGGTAGAAGGAAGCCTGGAAAAAGTGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: PRLFPSAVFSAA*CGRRKPGKSVL Trigger: CAAGACACTTTTTCCAGGCTTCCTTCTACCACATCATGCTGCAGAAAACACAGCAGATGGGAAGAGACGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000435024.2 ENST00000642946.1 |
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| CDS CCA 72 bp | AGGAAAAACAAACTTCTTTGTCGTCATTTTGGAGGCTaGAAGTCCAGGATCAGGGTGCCAGCACAACTGGGT | + |
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Preference number: 6 (lower is better) Translates to: RKNKLLCRHFGG*KSRIRVPAQLG Trigger: ACCCAGTTGTGCTGGCACCCTGATCCTGGACTTCCAGCCTCCAAAATGACGACAAAGAAGTTTGTTTTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 |
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| CDS CAA 72 bp | TACACAAAGAAAGGTAAGGAATTGATGGCCGCCGTCTaGGTTGACTGGCTACCACCCAGTGTGTTTCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: YTKKGKELMAAV*VDWLPPSVFLQ Trigger: TTGCAGAAACACACTGGGTGGTAGCCAGTCAACCAAGACGGCGGCCATCAATTCCTTACCTTTCTTTGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644746.1 ENST00000647525.1 |
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| CDS CAA 90 bp | TTTGAAGTGGATGGCTCAGGAAAAACAAACTTCTTTGTCGTCATTTaGGAGGCTGGAAGTCCAGGATCAGGGTGCCAGCACAACTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: FEVDGSGKTNFFVVI*EAGSPGSGCQHNWV Trigger: AACCCAGTTGTGCTGGCACCCTGATCCTGGACTTCCAGCCTCCAAAATGACGACAAAGAAGTTTGTTTTTCCTGAGCCATCCACTTCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 |
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| CDS CAA 72 bp | GAGGCTGATCAATACGAGTCTCATAGATTCAGTCACTaGCTGATTCTTGCTTCAGAGTGCCTTCTAAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: EADQYESHRFSH*LILASECLLRP Trigger: TGGCCTTAGAAGGCACTCTGAAGCAAGAATCAGCAAGTGACTGAATCTATGAGACTCGTATTGATCAGCCTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644746.1 ENST00000647525.1 |
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| CDS CAA 72 bp | ACTTTGAAGTGGATGGCTCAGGAAAAACAAACTTCTTaGTCGTCATTTTGGAGGCTGGAAGTCCAGGATCAG | + |
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Preference number: 6 (lower is better) Translates to: TLKWMAQEKQTS*SSFWRLEVQDQ Trigger: CTGATCCTGGACTTCCAGCCTCCAAAATGACGACAAAGAAGTTTGTTTTTCCTGAGCCATCCACTTCAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 |
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| CDS CAA 90 bp | ATTTCTTTTGAGGCTGATCAATACGAGTCTCATAGATTCAGTCACTaGCTGATTCTTGCTTCAGAGTGCCTTCTAAGGCCACCCCTATTC | + |
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Preference number: 6 (lower is better) Translates to: ISFEADQYESHRFSH*LILASECLLRPPLF Trigger: GAATAGGGGTGGCCTTAGAAGGCACTCTGAAGCAAGAATCAGCAAGTGACTGAATCTATGAGACTCGTATTGATCAGCCTCAAAAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000644746.1 ENST00000647525.1 |
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| CDS CAA 90 bp | ACCCAGTGTGTTTCTGCAACAATAAACCTCGCCAACCAAGGTATCTaGAGCACATCTCTATTCCTTGCAATTCTACAGTGTCTGTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: TQCVSATINLANQGI*STSLFLAILQCLSK Trigger: CTTAGACAGACACTGTAGAATTGCAAGGAATAGAGATGTGCTCAAGATACCTTGGTTGGCGAGGTTTATTGTTGCAGAAACACACTGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644746.1 ENST00000647525.1 |
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| CDS TCA 72 bp | TTGCCTTGTAAAATAGCTTGCCTGTCACATTATAGCTaGATTTCCAGCCTGCTGGCTTTCTCTGCAGATTTC | + |
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Preference number: 6 (lower is better) Translates to: LPCKIACLSHYS*ISSLLAFSADF Trigger: GAAATCTGCAGAGAAAGCCAGCAGGCTGGAAATTCAGCTATAATGTGACAGGCAAGCTATTTTACAAGGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647525.1 |
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| CDS CCA 72 bp | ACCTCCCAAAGGCCCCATCTATTAATACTATCTTATTaGCTATTAGGTCTTAGCATACGAATTTGGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: TSQRPHLLILSY*LLGLSIRIWVG Trigger: CCCCACCCAAATTCGTATGCTAAGACCTAATAGCCAATAAGATAGTATTAATAGATGGGGCCTTTGGGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 |
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| CDS CAA 90 bp | CTGCGAGTAATACAAGTTGTAACAGGTCCATTCTCACACATTGTATaGGAAGTTCCGAAGGAAGGCACTTTTCTTCTGTTATGGACTTGG | + |
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Preference number: 6 (lower is better) Translates to: LRVIQVVTGPFSHIV*EVPKEGTFLLLWTW Trigger: CCAAGTCCATAACAGAAGAAAAGTGCCTTCCTTCGGAACTTCCAATACAATGTGTGAGAATGGACCTGTTACAACTTGTATTACTCGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000644746.1 ENST00000647525.1 |
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| CDS CAA 72 bp | GTTTCTGCAACAATAAACCTCGCCAACCAAGGTATCTaGAGCACATCTCTATTCCTTGCAATTCTACAGTGT | + |
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Preference number: 6 (lower is better) Translates to: VSATINLANQGI*STSLFLAILQC Trigger: ACACTGTAGAATTGCAAGGAATAGAGATGTGCTCAAGATACCTTGGTTGGCGAGGTTTATTGTTGCAGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644746.1 ENST00000647525.1 |
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| CDS CAA 90 bp | TCTTCTGTTATGGACTTGGCTAAATCAATGGAAACTCCATATTCTTaGTCTTCATTCTTCTTTCCTCGCCACTTCCTTTTGGCCTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSVMDLAKSMETPYS*SSFFFPRHFLLALQ Trigger: CTGCAAGGCCAAAAGGAAGTGGCGAGGAAAGAAGAATGAAGACAAAGAATATGGAGTTTCCATTGATTTAGCCAAGTCCATAACAGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647525.1 |
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| CDS TCA 72 bp | TGTCTTTACAAAAATGTAAAAATTAGCTTGCTGTGGTaGCATGTGCCTGAAATCCCAGCTACTTGGTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: CLYKNVKISLLW*HVPEIPATWSA Trigger: AGCTGACCAAGTAGCTGGGATTTCAGGCACATGTCACCACAGCAAGCTAATTTTTACATTTTTGTAAAGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000643760.1 |
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| CDS TCA 72 bp | GTCTTAGTCTATTTGGGGAGCTATGACAGAATACTTTaGAGTGGATGGCTCAGGAAAAACAAACTTCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: VLVYLGSYDRIL*SGWLRKNKLLC Trigger: ACAAAGAAGTTTGTTTTTCCTGAGCCATCCACTTCAAAGTATTCTGTCATAGCTCCCCAAATAGACTAAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 |
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| CDS TCA 72 bp | AGGTTAAGTAGATGTCTTAGTCTATTTGGGGAGCTATaGCAGAATACTTTGAAGTGGATGGCTCAGGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: RLSRCLSLFGEL*QNTLKWMAQEK Trigger: TTTTTCCTGAGCCATCCACTTCAAAGTATTCTGTCATAGCTCCCCAAATAGACTAAGACATCTACTTAACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000439790.6 ENST00000444865.2 ENST00000642946.1 ENST00000643760.1 |
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| CDS CAA 72 bp | ATACAAGTTGTAACAGGTCCATTCTCACACATTGTATaGGAAGTTCCGAAGGAAGGCACTTTTCTTCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: IQVVTGPFSHIV*EVPKEGTFLLL Trigger: TAACAGAAGAAAAGTGCCTTCCTTCGGAACTTCCAATACAATGTGTGAGAATGGACCTGTTACAACTTGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000644746.1 ENST00000647525.1 |
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| CDS CAA 90 bp | TGTATTGGAAGTTCCGAAGGAAGGCACTTTTCTTCTGTTATGGACTaGGCTAAATCAATGGAAACTCCATATTCTTTGTCTTCATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: CIGSSEGRHFSSVMD*AKSMETPYSLSSFF Trigger: GAAGAATGAAGACAAAGAATATGGAGTTTCCATTGATTTAGCCAAGTCCATAACAGAAGAAAAGTGCCTTCCTTCGGAACTTCCAATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000644746.1 ENST00000647525.1 |
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