Pregenerated sensors for LINC00459 (Homo sapiens)

Ensembl gene IDs: ENSG00000229307

Ensembl transcript IDs: ENST00000431656.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CGATCCCTGGGTTCAGCCTGTTCACCATCTCAAAGGGATCGGAGTTaGCATTTAGCTGAATGTGGAGCAAGAATAGACAGACTGCTACGC	+
Preference number: 5 (lower is better) Translates to: RSLGSACSPSQRDRS*HLAECGARIDRLLR Trigger: GCGTAGCAGTCTGTCTATTCTTGCTCCACATTCAGCTAAATGCCAACTCCGATCCCTTTGAGATGGTGAACAGGCTGAACCCAGGGATCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431656.1
CDS TCA 90 bp	TTCAGCCTGTTCACCATCTCAAAGGGATCGGAGTTGGCATTTAGCTaGATGTGGAGCAAGAATAGACAGACTGCTACGCTGCTCTTCTGT	+
Preference number: 5 (lower is better) Translates to: FSLFTISKGSELAFS*MWSKNRQTATLLFC Trigger: ACAGAAGAGCAGCGTAGCAGTCTGTCTATTCTTGCTCCACATTCAGCTAAATGCCAACTCCGATCCCTTTGAGATGGTGAACAGGCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431656.1
CDS TCA 90 bp	AATCAAGAAGTTTCACCACATGGTTCTCTGAAGAAGTCTGGATACTaGGGGATGACACGATCCCTGGGTTCAGCCTGTTCACCATCTCAA	+
Preference number: 5 (lower is better) Translates to: NQEVSPHGSLKKSGY*GMTRSLGSACSPSQ Trigger: TTGAGATGGTGAACAGGCTGAACCCAGGGATCGTGTCATCCCTCAGTATCCAGACTTCTTCAGAGAACCATGTGGTGAAACTTCTTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431656.1
CDS GCA 90 bp	TGGCATTTAGCTGAATGTGGAGCAAGAATAGACAGACTGCTACGCTaGTCTTCTGTTCAACAGCCTCATCACAAAGGACAGGTTCAACTT	+
Preference number: 5 (lower is better) Translates to: WHLAECGARIDRLLR*SSVQQPHHKGQVQL Trigger: AAGTTGAACCTGTCCTTTGTGATGAGGCTGTTGAACAGAAGAGCAGCGTAGCAGTCTGTCTATTCTTGCTCCACATTCAGCTAAATGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431656.1
CDS GCA 90 bp	TACATTTCCCTTCAGCATCACAAAATGTATAGTTGTCTCTTCTTTTaGGACCTTAATCAAGAAGTTTCACCACATGGTTCTCTGAAGAAG	+
Preference number: 5 (lower is better) Translates to: YISLQHHKMYSCLFF*DLNQEVSPHGSLKK Trigger: CTTCTTCAGAGAACCATGTGGTGAAACTTCTTGATTAAGGTCGCAAAAGAAGAGACAACTATACATTTTGTGATGCTGAAGGGAAATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431656.1
CDS TCA 72 bp	GTTTCACCACATGGTTCTCTGAAGAAGTCTGGATACTaGGGGATGACACGATCCCTGGGTTCAGCCTGTTCA	+
Preference number: 6 (lower is better) Translates to: VSPHGSLKKSGY*GMTRSLGSACS Trigger: TGAACAGGCTGAACCCAGGGATCGTGTCATCCCTCAGTATCCAGACTTCTTCAGAGAACCATGTGGTGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431656.1
CDS TCA 72 bp	TTCACCATCTCAAAGGGATCGGAGTTGGCATTTAGCTaGATGTGGAGCAAGAATAGACAGACTGCTACGCTG	+
Preference number: 6 (lower is better) Translates to: FTISKGSELAFS*MWSKNRQTATL Trigger: CAGCGTAGCAGTCTGTCTATTCTTGCTCCACATTCAGCTAAATGCCAACTCCGATCCCTTTGAGATGGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431656.1
CDS CCA 72 bp	GGTTCAGCCTGTTCACCATCTCAAAGGGATCGGAGTTaGCATTTAGCTGAATGTGGAGCAAGAATAGACAGA	+
Preference number: 6 (lower is better) Translates to: GSACSPSQRDRS*HLAECGARIDR Trigger: TCTGTCTATTCTTGCTCCACATTCAGCTAAATGCCAACTCCGATCCCTTTGAGATGGTGAACAGGCTGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431656.1

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