Pregenerated sensors for LINC00458 (Homo sapiens)
Ensembl gene IDs: ENSG00000234787Ensembl transcript IDs: ENST00000423442.6, ENST00000427299.6, ENST00000451744.1, ENST00000606055.1, ENST00000606706.5, ENST00000607494.5, ENST00000666992.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGTAAGGCCCACTGGGTCCCTGCTAAGAAGGGGCATCGTGGTGCTTaGAGCATCATTGACAATGACAGGCACTTGTCACTCATGGGTTGG | + |
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Preference number: 5 (lower is better) Translates to: GKAHWVPAKKGHRGA*SIIDNDRHLSLMGW Trigger: CCAACCCATGAGTGACAAGTGCCTGTCATTGTCAATGATGCTGCAAGCACCACGATGCCCCTTCTTAGCAGGGACCCAGTGGGCCTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423442.6 ENST00000606055.1 |
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| CDS CCA 90 bp | ATGACAGGCACTTGTCACTCATGGGTTGGTGTTCTCCTCTCTCCATaGCCTCGTCTATCCATCTGGGAGTTGCAGGTGATGTCCTCACTA | + |
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Preference number: 5 (lower is better) Translates to: MTGTCHSWVGVLLSP*PRLSIWELQVMSSL Trigger: TAGTGAGGACATCACCTGCAACTCCCAGATGGATAGACGAGGCCATGGAGAGAGGAGAACACCAACCCATGAGTGACAAGTGCCTGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423442.6 ENST00000606055.1 |
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| CDS TCA 90 bp | ATAATGGCGGAAGGCAAAGGGAAAGCAGCACACCTTTACATGGAGTaGAAGAGCCTCAGGCAGGTCCTTCAGGAGGTATCCAGAAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: IMAEGKGKAAHLYME*KSLRQVLQEVSRRR Trigger: CCTTCTTCTGGATACCTCCTGAAGGACCTGCCTGAGGCTCTTTCACTCCATGTAAAGGTGTGCTGCTTTCCCTTTGCCTTCCGCCATTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423442.6 |
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| CDS CCA 90 bp | GCTTGCAGCATCATTGACAATGACAGGCACTTGTCACTCATGGGTTaGTGTTCTCCTCTCTCCATGGCCTCGTCTATCCATCTGGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: ACSIIDNDRHLSLMG*CSPLSMASSIHLGV Trigger: AACTCCCAGATGGATAGACGAGGCCATGGAGAGAGGAGAACACCAACCCATGAGTGACAAGTGCCTGTCATTGTCAATGATGCTGCAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423442.6 ENST00000606055.1 |
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| CDS CCA 90 bp | AGGATGCGATCATGCCTAGAAAATAATGAAGCTGGTAAGGCCCACTaGGTCCCTGCTAAGAAGGGGCATCGTGGTGCTTGCAGCATCATT | + |
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Preference number: 5 (lower is better) Translates to: RMRSCLENNEAGKAH*VPAKKGHRGACSII Trigger: AATGATGCTGCAAGCACCACGATGCCCCTTCTTAGCAGGGACCCAGTGGGCCTTACCAGCTTCATTATTTTCTAGGCATGATCGCATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000423442.6 ENST00000606055.1 |
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| CDS GCA 90 bp | TCAGAACACTGGGATCAATCTCCAGAGGTCATCGATCTCACCCCTTaGCCCAATGACTCATGTTGCTTCTCTTTATTTAAGCTAGAATCC | + |
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Preference number: 5 (lower is better) Translates to: SEHWDQSPEVIDLTP*PNDSCCFSLFKLES Trigger: GGATTCTAGCTTAAATAAAGAGAAGCAACATGAGTCATTGGGGCAAGGGGTGAGATCGATGACCTCTGGAGATTGATCCCAGTGTTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451744.1 |
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| CDS CCA 90 bp | AGCTTTGCAGGCCTGAAATTGCAAGTTCAGCTGCTTTGGAACAGGTaGATTAGTGGTAGTTTTATGGAACATGTGGCTAATGGTGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: SFAGLKLQVQLLWNR*ISGSFMEHVANGVL Trigger: AAGGACACCATTAGCCACATGTTCCATAAAACTACCACTAATCCACCTGTTCCAAAGCAGCTGAACTTGCAATTTCAGGCCTGCAAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666992.1 |
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| CDS TCA 90 bp | GTCCTTCAGGAGGTATCCAGAAGAAGGCATTGTTATCATAGGAGATaGCAGCTCCATTATGTATTATTGTCTCTGAAGACCATCCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: VLQEVSRRRHCYHRR*QLHYVLLSLKTIQW Trigger: CCACTGGATGGTCTTCAGAGACAATAATACATAATGGAGCTGTCATCTCCTATGATAACAATGCCTTCTTCTGGATACCTCCTGAAGGAC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423442.6 ENST00000606706.5 ENST00000607494.5 |
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| CDS TCA 90 bp | AACAGTCCGATTTTCAGTGGGGTCCAAGAGCCTTCAGAGAAATGCTaGCTTAGTTCATTCATGGCAAACTCTGAGCTTCTGATCTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: NSPIFSGVQEPSEKC*LSSFMANSELLISN Trigger: ATTTGAGATCAGAAGCTCAGAGTTTGCCATGAATGAACTAAGTCAGCATTTCTCTGAAGGCTCTTGGACCCCACTGAAAATCGGACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666992.1 |
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| CDS TCA 90 bp | ATTGTTATCATAGGAGATGACAGCTCCATTATGTATTATTGTCTCTaGAGACCATCCAGTGGGACAAGATGCAGCTCTCACAGTACTTGC | + |
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Preference number: 5 (lower is better) Translates to: IVIIGDDSSIMYYCL*RPSSGTRCSSHSTC Trigger: GCAAGTACTGTGAGAGCTGCATCTTGTCCCACTGGATGGTCTTCAGAGACAATAATACATAATGGAGCTGTCATCTCCTATGATAACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423442.6 ENST00000606706.5 ENST00000607494.5 |
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| CDS TCA 90 bp | TACCACAGTGGCTTCTGCAGAATTGGCATTCATGGAACAAAAGAATaGGTCCAATCCTTGAGTAGGCTCTATCAGCATCACTATGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: YHSGFCRIGIHGTKE*VQSLSRLYQHHYEK Trigger: TTTTTCATAGTGATGCTGATAGAGCCTACTCAAGGATTGGACTCATTCTTTTGTTCCATGAATGCCAATTCTGCAGAAGCCACTGTGGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451744.1 |
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| CDS CCA 90 bp | ATGTCTTTTAGCTTTGCAGGCCTGAAATTGCAAGTTCAGCTGCTTTaGAACAGGTGGATTAGTGGTAGTTTTATGGAACATGTGGCTAAT | + |
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Preference number: 5 (lower is better) Translates to: MSFSFAGLKLQVQLL*NRWISGSFMEHVAN Trigger: ATTAGCCACATGTTCCATAAAACTACCACTAATCCACCTGTTCCAAAGCAGCTGAACTTGCAATTTCAGGCCTGCAAAGCTAAAAGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666992.1 |
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| CDS TCA 90 bp | GTTGTCAGAATATCATGGTGTGTCATATTACTCACGTGTTTGTGGTaGTGCTGGTATAAACAAACCTACTGTGCTGCCAGTCACATAAAA | + |
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Preference number: 5 (lower is better) Translates to: VVRISWCVILLTCLW*CWYKQTYCAASHIK Trigger: TTTTATGTGACTGGCAGCACAGTAGGTTTGTTTATACCAGCATCACCACAAACACGTGAGTAATATGACACACCATGATATTCTGACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607494.5 |
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| CDS CCA 90 bp | AGCTGCTTTGGAACAGGTGGATTAGTGGTAGTTTTATGGAACATGTaGCTAATGGTGTCCTTATACGTGGGATGTTTGATTTGTCTAAAA | + |
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Preference number: 5 (lower is better) Translates to: SCFGTGGLVVVLWNM*LMVSLYVGCLICLK Trigger: TTTTAGACAAATCAAACATCCCACGTATAAGGACACCATTAGCCACATGTTCCATAAAACTACCACTAATCCACCTGTTCCAAAGCAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666992.1 |
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| CDS GCA 90 bp | TCTCCAGAGGTCATCGATCTCACCCCTTGCCCCAATGACTCATGTTaGTTCTCTTTATTTAAGCTAGAATCCATTAATAGAATAATTATA | + |
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Preference number: 5 (lower is better) Translates to: SPEVIDLTPCPNDSC*FSLFKLESINRIII Trigger: TATAATTATTCTATTAATGGATTCTAGCTTAAATAAAGAGAAGCAACATGAGTCATTGGGGCAAGGGGTGAGATCGATGACCTCTGGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451744.1 |
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| CDS CCA 72 bp | CAGTCAGAGAGGCTTGGGCCAGAGTTCCAGGGGCTCTaGGAGTGGCTGCCAGATGAGTTGAACAGTCCGATT | + |
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Preference number: 6 (lower is better) Translates to: QSERLGPEFQGL*EWLPDELNSPI Trigger: AATCGGACTGTTCAACTCATCTGGCAGCCACTCCCAGAGCCCCTGGAACTCTGGCCCAAGCCTCTCTGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000427299.6 ENST00000451744.1 ENST00000606706.5 ENST00000666992.1 |
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| CDS TCA 72 bp | CTTTCTCACGGAGCAAAGAGCAGGAGGACTGGGGATTaGTCTCCCAAGGGAGGTACCCCGATCCGAGTCATG | + |
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Preference number: 6 (lower is better) Translates to: LSHGAKSRRTGD*SPKGGTPIRVM Trigger: CATGACTCGGATCGGGGTACCTCCCTTGGGAGATCAATCCCCAGTCCTCCTGCTCTTTGCTCCGTGAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000423442.6 ENST00000427299.6 ENST00000451744.1 ENST00000606706.5 ENST00000607494.5 |
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| CDS TCA 72 bp | TCCTCACTAAGGCACCCTTGCCAGGCTTCAGGAGGCTaGGGACTGTCCTCTTCTCTCTCAGAAGGCAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: SSLRHPCQASGG*GLSSSLSEGKV Trigger: CACCTTGCCTTCTGAGAGAGAAGAGGACAGTCCTCAGCCTCCTGAAGCCTGGCAAGGGTGCCTTAGTGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423442.6 ENST00000606055.1 |
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| CDS CCA 72 bp | GGTAGATCTTTCTCACGGAGCAAAGAGCAGGAGGACTaGGGATTGATCTCCCAAGGGAGGTACCCCGATCCG | + |
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Preference number: 6 (lower is better) Translates to: GRSFSRSKEQED*GLISQGRYPDP Trigger: CGGATCGGGGTACCTCCCTTGGGAGATCAATCCCCAGTCCTCCTGCTCTTTGCTCCGTGAGAAAGATCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000423442.6 ENST00000427299.6 ENST00000451744.1 ENST00000606706.5 ENST00000607494.5 |
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| CDS CAA 72 bp | CTCCTCTCTCCATGGCCTCGTCTATCCATCTGGGAGTaGCAGGTGATGTCCTCACTAAGGCACCCTTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LLSPWPRLSIWE*QVMSSLRHPCQ Trigger: CTGGCAAGGGTGCCTTAGTGAGGACATCACCTGCAACTCCCAGATGGATAGACGAGGCCATGGAGAGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423442.6 ENST00000606055.1 |
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| CDS CAA 90 bp | GTTGGTGTTCTCCTCTCTCCATGGCCTCGTCTATCCATCTGGGAGTaGCAGGTGATGTCCTCACTAAGGCACCCTTGCCAGGCTTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: VGVLLSPWPRLSIWE*QVMSSLRHPCQASG Trigger: TCCTGAAGCCTGGCAAGGGTGCCTTAGTGAGGACATCACCTGCAACTCCCAGATGGATAGACGAGGCCATGGAGAGAGGAGAACACCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423442.6 ENST00000606055.1 |
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| CDS CCA 72 bp | GGTGTTCTCCTCTCTCCATGGCCTCGTCTATCCATCTaGGAGTTGCAGGTGATGTCCTCACTAAGGCACCCT | + |
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Preference number: 6 (lower is better) Translates to: GVLLSPWPRLSI*ELQVMSSLRHP Trigger: AGGGTGCCTTAGTGAGGACATCACCTGCAACTCCCAGATGGATAGACGAGGCCATGGAGAGAGGAGAACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423442.6 ENST00000606055.1 |
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| CDS CAA 72 bp | TCTTTCTCACGGAGCAAAGAGCAGGAGGACTGGGGATaGATCTCCCAAGGGAGGTACCCCGATCCGAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SFSRSKEQEDWG*ISQGRYPDPSH Trigger: ATGACTCGGATCGGGGTACCTCCCTTGGGAGATCAATCCCCAGTCCTCCTGCTCTTTGCTCCGTGAGAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000423442.6 ENST00000427299.6 ENST00000451744.1 ENST00000606706.5 ENST00000607494.5 |
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| CDS CAA 90 bp | GGGAGGTACCCCGATCCGAGTCATGGCACCAAATTTCATGCGCGTTaGTGTGAAGAGACCACCAAACAGGCTTTGTGTGAGCAACAAGGC | + |
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Preference number: 6 (lower is better) Translates to: GRYPDPSHGTKFHAR*CEETTKQALCEQQG Trigger: GCCTTGTTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACACAAACGCGCATGAAATTTGGTGCCATGACTCGGATCGGGGTACCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000423442.6 ENST00000427299.6 ENST00000451744.1 ENST00000606706.5 ENST00000607494.5 |
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| CDS CAA 90 bp | ACTGGGTCCCTGCTAAGAAGGGGCATCGTGGTGCTTGCAGCATCATaGACAATGACAGGCACTTGTCACTCATGGGTTGGTGTTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: TGSLLRRGIVVLAAS*TMTGTCHSWVGVLL Trigger: GAGGAGAACACCAACCCATGAGTGACAAGTGCCTGTCATTGTCAATGATGCTGCAAGCACCACGATGCCCCTTCTTAGCAGGGACCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423442.6 ENST00000606055.1 |
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| CDS TCA 72 bp | GAAGGCAAAGGGAAAGCAGCACACCTTTACATGGAGTaGAAGAGCCTCAGGCAGGTCCTTCAGGAGGTATCC | + |
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Preference number: 6 (lower is better) Translates to: EGKGKAAHLYME*KSLRQVLQEVS Trigger: GGATACCTCCTGAAGGACCTGCCTGAGGCTCTTTCACTCCATGTAAAGGTGTGCTGCTTTCCCTTTGCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423442.6 |
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| CDS CCA 72 bp | TCATGCCTAGAAAATAATGAAGCTGGTAAGGCCCACTaGGTCCCTGCTAAGAAGGGGCATCGTGGTGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SCLENNEAGKAH*VPAKKGHRGAC Trigger: GCAAGCACCACGATGCCCCTTCTTAGCAGGGACCCAGTGGGCCTTACCAGCTTCATTATTTTCTAGGCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000423442.6 ENST00000606055.1 |
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| CDS CAA 72 bp | CCCGATCCGAGTCATGGCACCAAATTTCATGCGCGTTaGTGTGAAGAGACCACCAAACAGGCTTTGTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: PDPSHGTKFHAR*CEETTKQALCE Trigger: CTCACACAAAGCCTGTTTGGTGGTCTCTTCACACAAACGCGCATGAAATTTGGTGCCATGACTCGGATCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000423442.6 ENST00000427299.6 ENST00000451744.1 ENST00000606706.5 ENST00000607494.5 |
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| CDS CAA 72 bp | CTGCTAAGAAGGGGCATCGTGGTGCTTGCAGCATCATaGACAATGACAGGCACTTGTCACTCATGGGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LLRRGIVVLAAS*TMTGTCHSWVG Trigger: ACCAACCCATGAGTGACAAGTGCCTGTCATTGTCAATGATGCTGCAAGCACCACGATGCCCCTTCTTAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423442.6 ENST00000606055.1 |
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| CDS CAA 90 bp | ACCAAATTTCATGCGCGTTTGTGTGAAGAGACCACCAAACAGGCTTaGTGTGAGCAACAAGGCTGTTTATTTCACCTGGGTGCAGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: TKFHARLCEETTKQA*CEQQGCLFHLGAGG Trigger: CCCGCCTGCACCCAGGTGAAATAAACAGCCTTGTTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACACAAACGCGCATGAAATTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000423442.6 ENST00000427299.6 ENST00000451744.1 ENST00000607494.5 |
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| CDS GCA 72 bp | CCATCCAGTGGGACAAGATGCAGCTCTCACAGTACTTaGTGTAGGAAGGTTGTGAGATGTCCATCCTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: PSSGTRCSSHST*CRKVVRCPSFE Trigger: CTCAAAGGATGGACATCTCACAACCTTCCTACAGCAAGTACTGTGAGAGCTGCATCTTGTCCCACTGGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423442.6 ENST00000606706.5 ENST00000607494.5 |
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| CDS CCA 72 bp | TTTTGGCTTATGGTTTCACAGGTCGTACAGGTAGCATaGCTGGGGAGGCCTCAGGAAACTTTCAATAATGGC | + |
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Preference number: 6 (lower is better) Translates to: FWLMVSQVVQVA*LGRPQETFNNG Trigger: GCCATTATTGAAAGTTTCCTGAGGCCTCCCCAGCCATGCTACCTGTACGACCTGTGAAACCATAAGCCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423442.6 |
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| CDS CCA 72 bp | ATCATTGACAATGACAGGCACTTGTCACTCATGGGTTaGTGTTCTCCTCTCTCCATGGCCTCGTCTATCCAT | + |
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Preference number: 6 (lower is better) Translates to: IIDNDRHLSLMG*CSPLSMASSIH Trigger: ATGGATAGACGAGGCCATGGAGAGAGGAGAACACCAACCCATGAGTGACAAGTGCCTGTCATTGTCAATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423442.6 ENST00000606055.1 |
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| CDS CAA 72 bp | CATGCGCGTTTGTGTGAAGAGACCACCAAACAGGCTTaGTGTGAGCAACAAGGCTGTTTATTTCACCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: HARLCEETTKQA*CEQQGCLFHLG Trigger: ACCCAGGTGAAATAAACAGCCTTGTTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACACAAACGCGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000423442.6 ENST00000427299.6 ENST00000451744.1 ENST00000607494.5 |
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| CDS GCA 72 bp | TGGGATCAATCTCCAGAGGTCATCGATCTCACCCCTTaGCCCAATGACTCATGTTGCTTCTCTTTATTTAAG | + |
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Preference number: 6 (lower is better) Translates to: WDQSPEVIDLTP*PNDSCCFSLFK Trigger: CTTAAATAAAGAGAAGCAACATGAGTCATTGGGGCAAGGGGTGAGATCGATGACCTCTGGAGATTGATCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451744.1 |
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| CDS TCA 72 bp | GGCTTCTGCAGAATTGGCATTCATGGAACAAAAGAATaGGTCCAATCCTTGAGTAGGCTCTATCAGCATCAC | + |
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Preference number: 6 (lower is better) Translates to: GFCRIGIHGTKE*VQSLSRLYQHH Trigger: GTGATGCTGATAGAGCCTACTCAAGGATTGGACTCATTCTTTTGTTCCATGAATGCCAATTCTGCAGAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451744.1 |
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| CDS CCA 72 bp | GGCCTGAAATTGCAAGTTCAGCTGCTTTGGAACAGGTaGATTAGTGGTAGTTTTATGGAACATGTGGCTAAT | + |
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Preference number: 6 (lower is better) Translates to: GLKLQVQLLWNR*ISGSFMEHVAN Trigger: ATTAGCCACATGTTCCATAAAACTACCACTAATCCACCTGTTCCAAAGCAGCTGAACTTGCAATTTCAGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666992.1 |
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| CDS CCA 72 bp | AGCTTTGCAGGCCTGAAATTGCAAGTTCAGCTGCTTTaGAACAGGTGGATTAGTGGTAGTTTTATGGAACAT | + |
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Preference number: 6 (lower is better) Translates to: SFAGLKLQVQLL*NRWISGSFMEH Trigger: ATGTTCCATAAAACTACCACTAATCCACCTGTTCCAAAGCAGCTGAACTTGCAATTTCAGGCCTGCAAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666992.1 |
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| CDS CAA 90 bp | TCTGCTCACCGTTTGTTAATGTCTTTTAGCTTTGCAGGCCTGAAATaGCAAGTTCAGCTGCTTTGGAACAGGTGGATTAGTGGTAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SAHRLLMSFSFAGLK*QVQLLWNRWISGSF Trigger: AAAACTACCACTAATCCACCTGTTCCAAAGCAGCTGAACTTGCAATTTCAGGCCTGCAAAGCTAAAAGACATTAACAAACGGTGAGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666992.1 |
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| CDS CAA 72 bp | CACTTCAGTAGCAGTTGGCTAAAAAGACCACAGAATTaGTCATCCAAACCGGACACTATTGAGAGTCTAAGA | + |
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Preference number: 6 (lower is better) Translates to: HFSSSWLKRPQN*SSKPDTIESLR Trigger: TCTTAGACTCTCAATAGTGTCCGGTTTGGATGACAAATTCTGTGGTCTTTTTAGCCAACTGCTACTGAAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427299.6 |
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| CDS CAA 72 bp | CGTTTGTTAATGTCTTTTAGCTTTGCAGGCCTGAAATaGCAAGTTCAGCTGCTTTGGAACAGGTGGATTAGT | + |
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Preference number: 6 (lower is better) Translates to: RLLMSFSFAGLK*QVQLLWNRWIS Trigger: ACTAATCCACCTGTTCCAAAGCAGCTGAACTTGCAATTTCAGGCCTGCAAAGCTAAAAGACATTAACAAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666992.1 |
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| CDS CAA 90 bp | AAATCTGACCACTTCAGTAGCAGTTGGCTAAAAAGACCACAGAATTaGTCATCCAAACCGGACACTATTGAGAGTCTAAGAGGATACCAT | + |
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Preference number: 6 (lower is better) Translates to: KSDHFSSSWLKRPQN*SSKPDTIESLRGYH Trigger: ATGGTATCCTCTTAGACTCTCAATAGTGTCCGGTTTGGATGACAAATTCTGTGGTCTTTTTAGCCAACTGCTACTGAAGTGGTCAGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427299.6 |
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| CDS CAA 90 bp | ATGGAACATGTGGCTAATGGTGTCCTTATACGTGGGATGTTTGATTaGTCTAAAAGAGAGATTGCTGTTGCTTTTCCTACAGCTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: MEHVANGVLIRGMFD*SKREIAVAFPTAAS Trigger: AGAAGCAGCTGTAGGAAAAGCAACAGCAATCTCTCTTTTAGACAAATCAAACATCCCACGTATAAGGACACCATTAGCCACATGTTCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666992.1 |
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| CDS TCA 72 bp | GAGGTATCCAGAAGAAGGCATTGTTATCATAGGAGATaGCAGCTCCATTATGTATTATTGTCTCTGAAGACC | + |
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Preference number: 6 (lower is better) Translates to: EVSRRRHCYHRR*QLHYVLLSLKT Trigger: GGTCTTCAGAGACAATAATACATAATGGAGCTGTCATCTCCTATGATAACAATGCCTTCTTCTGGATACCTC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423442.6 ENST00000606706.5 ENST00000607494.5 |
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| CDS GCA 72 bp | GTCATCGATCTCACCCCTTGCCCCAATGACTCATGTTaGTTCTCTTTATTTAAGCTAGAATCCATTAATAGA | + |
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Preference number: 6 (lower is better) Translates to: VIDLTPCPNDSC*FSLFKLESINR Trigger: TCTATTAATGGATTCTAGCTTAAATAAAGAGAAGCAACATGAGTCATTGGGGCAAGGGGTGAGATCGATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451744.1 |
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| CDS CAA 72 bp | AACATGTGGCTAATGGTGTCCTTATACGTGGGATGTTaGATTTGTCTAAAAGAGAGATTGCTGTTGCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: NMWLMVSLYVGC*ICLKERLLLLF Trigger: GAAAAGCAACAGCAATCTCTCTTTTAGACAAATCAAACATCCCACGTATAAGGACACCATTAGCCACATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666992.1 |
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| CDS TCA 72 bp | TTGGCATTCATGGAACAAAAGAATGAGTCCAATCCTTaGGTAGGCTCTATCAGCATCACTATGAAAAACTAT | + |
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Preference number: 6 (lower is better) Translates to: LAFMEQKNESNP*VGSISITMKNY Trigger: ATAGTTTTTCATAGTGATGCTGATAGAGCCTACTCAAGGATTGGACTCATTCTTTTGTTCCATGAATGCCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451744.1 |
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